genelib report for 4002171, SCIU

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameTrichoderma virens Gv29-8
genus_speciesTrichoderma virens
strainGv29-8
source_librarysource_library_name
vector_name
source_dnasource_dna_nameTrvi_0001
source_dna_number4002171
source_dna_typeWhole Genome
seq_projectproject_number4002171
project_type2006 CSP
draft_analysis_group_des
deadline30-SEP-06
seq_librarylibrary_nameSCIU
library_type18s ribosomal Eukarya
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size.7
plates_expected
depth_target
insert_userhtice
date_entered10-OCT-05
seq_lib_vectorvector_namepCR4-TOPO_eukarya
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114379
dna_received15-SEP-05
sample_description
ribosomal_profileEukaryote

Processing Summary:

Reads Input: 288

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192969595N/A
Failed96010N/A

Contigs Output: 95

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
951

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(95)_SCIU569099.9872gi|7619936|dbj|AB027338.1| Hypocrea lutea DNA for 18S ribosomal RNA
99.9872gi|11830870|emb|AJ301991.1|HRU301991 Hypocrea rufa 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain Hy9
99.9872gi|11877246|emb|AJ301990.1|HKO301990 Hypocrea koningii 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain ATCC 64262
99.9872gi|21239410|gb|AF510497.1| Hypocrea jecorina 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
99.9872gi|21954736|gb|AF525230.1| Trichoderma viride 18S ribosomal RNA gene, partial sequence
CLUSTER0(95)_SCIU569799.9872gi|7619936|dbj|AB027338.1| Hypocrea lutea DNA for 18S ribosomal RNA
99.9872gi|11830870|emb|AJ301991.1|HRU301991 Hypocrea rufa 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain Hy9
99.9872gi|11877246|emb|AJ301990.1|HKO301990 Hypocrea koningii 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain ATCC 64262
99.9872gi|21239410|gb|AF510497.1| Hypocrea jecorina 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
99.9872gi|21954736|gb|AF525230.1| Trichoderma viride 18S ribosomal RNA gene, partial sequence
CLUSTER0(95)_SCIU571499.9872gi|7619936|dbj|AB027338.1| Hypocrea lutea DNA for 18S ribosomal RNA
99.9872gi|11830870|emb|AJ301991.1|HRU301991 Hypocrea rufa 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain Hy9
99.9872gi|11877246|emb|AJ301990.1|HKO301990 Hypocrea koningii 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain ATCC 64262
99.9872gi|21239410|gb|AF510497.1| Hypocrea jecorina 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
99.9872gi|21954736|gb|AF525230.1| Trichoderma viride 18S ribosomal RNA gene, partial sequence
CLUSTER0(95)_SCIU574199.9870gi|7619936|dbj|AB027338.1| Hypocrea lutea DNA for 18S ribosomal RNA
99.9870gi|11830870|emb|AJ301991.1|HRU301991 Hypocrea rufa 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain Hy9
99.9870gi|11877246|emb|AJ301990.1|HKO301990 Hypocrea koningii 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), strain ATCC 64262
99.9870gi|21239410|gb|AF510497.1| Hypocrea jecorina 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
99.9870gi|21954736|gb|AF525230.1| Trichoderma viride 18S ribosomal RNA gene, partial sequence