| Cluster Rep ID | Pct-Id | Align len | Hit |
| CLUSTER0(94)_SCTS6300 | 99.3 | 757 | gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence |
| 96.7 | 91 | gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence |
| 99.3 | 757 | Neocallimastix sp.#1717 bp##rna |
| 96.7 | 91 | Neocallimastix sp.#1717 bp##rna |
| 99.2 | 757 | gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene |
| 96.7 | 91 | gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene |
| 99.2 | 757 | Neocallimastix frontalis#1736 bp##rna |
| 96.7 | 91 | Neocallimastix frontalis#1736 bp##rna |
| 96.7 | 724 | gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence |
| 97.6 | 83 | gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence |
| CLUSTER0(94)_SCTS6301 | 99.2 | 753 | gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence |
| 96.8 | 93 | gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence |
| 99.2 | 753 | Neocallimastix sp.#1717 bp##rna |
| 96.8 | 93 | Neocallimastix sp.#1717 bp##rna |
| 99.1 | 753 | gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene |
| 96.8 | 93 | gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene |
| 99.1 | 753 | Neocallimastix frontalis#1736 bp##rna |
| 96.8 | 93 | Neocallimastix frontalis#1736 bp##rna |
| 96.5 | 720 | gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence |
| 97.6 | 85 | gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence |
| CLUSTER0(94)_SCTS6317 | 99.3 | 750 | gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence |
| 96.8 | 93 | gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence |
| 99.3 | 750 | Neocallimastix sp.#1717 bp##rna |
| 96.8 | 93 | Neocallimastix sp.#1717 bp##rna |
| 99.2 | 750 | gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene |
| 96.8 | 93 | gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene |
| 99.2 | 750 | Neocallimastix frontalis#1736 bp##rna |
| 96.8 | 93 | Neocallimastix frontalis#1736 bp##rna |
| 96.7 | 717 | gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence |
| 97.6 | 85 | gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence |
| CLUSTER0(94)_SCTS6336 | 99.3 | 753 | gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence |
| 96.7 | 92 | gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence |
| 99.3 | 753 | Neocallimastix sp.#1717 bp##rna |
| 96.7 | 92 | Neocallimastix sp.#1717 bp##rna |
| 99.2 | 753 | gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene |
| 96.7 | 92 | gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene |
| 99.2 | 753 | Neocallimastix frontalis#1736 bp##rna |
| 96.7 | 92 | Neocallimastix frontalis#1736 bp##rna |
| 96.7 | 720 | gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence |
| 97.6 | 84 | gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence |
| CLUSTER1(1)_SCTS6329 | 87.7 | 489 | gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence |
| 87.7 | 489 | Neocallimastix sp.#1717 bp##rna |
| 87.5 | 489 | gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene |
| 88.4 | 458 | gi|55859492|emb|AJ864475.1| Orpinomyces sp. OUS1 partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA, clone V5-1 |
| 87.5 | 489 | Neocallimastix frontalis#1736 bp##rna |