genelib report for 4002172, SCTS

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_namePiromyces sp E2
genus_speciesPiromyces sp
strainE2
source_librarysource_library_name
vector_name
source_dnasource_dna_namePisp_0002
source_dna_number4002172
source_dna_typeWhole Genome
seq_projectproject_number4002172
project_type2006 CSP
draft_analysis_group_des
deadline30-SEP-06
seq_librarylibrary_nameSCTS
library_type18s ribosomal Eukarya
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size.7
plates_expected
depth_target
insert_userdscott
date_entered21-OCT-05
seq_lib_vectorvector_namepCR4-TOPO_eukarya
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114380
dna_received05-OCT-05
sample_description
ribosomal_profileEukaryote

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192969595N/A
Failed0010N/A

Contigs Output: 95

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
941
11

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(94)_SCTS630099.3757gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
96.791gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
99.3757Neocallimastix sp.#1717 bp##rna
96.791Neocallimastix sp.#1717 bp##rna
99.2757gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
96.791gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
99.2757Neocallimastix frontalis#1736 bp##rna
96.791Neocallimastix frontalis#1736 bp##rna
96.7724gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence
97.683gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence
CLUSTER0(94)_SCTS630199.2753gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
96.893gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
99.2753Neocallimastix sp.#1717 bp##rna
96.893Neocallimastix sp.#1717 bp##rna
99.1753gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
96.893gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
99.1753Neocallimastix frontalis#1736 bp##rna
96.893Neocallimastix frontalis#1736 bp##rna
96.5720gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence
97.685gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence
CLUSTER0(94)_SCTS631799.3750gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
96.893gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
99.3750Neocallimastix sp.#1717 bp##rna
96.893Neocallimastix sp.#1717 bp##rna
99.2750gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
96.893gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
99.2750Neocallimastix frontalis#1736 bp##rna
96.893Neocallimastix frontalis#1736 bp##rna
96.7717gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence
97.685gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence
CLUSTER0(94)_SCTS633699.3753gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
96.792gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
99.3753Neocallimastix sp.#1717 bp##rna
96.792Neocallimastix sp.#1717 bp##rna
99.2753gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
96.792gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
99.2753Neocallimastix frontalis#1736 bp##rna
96.792Neocallimastix frontalis#1736 bp##rna
96.7720gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence
97.684gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence
CLUSTER1(1)_SCTS632987.7489gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
87.7489Neocallimastix sp.#1717 bp##rna
87.5489gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
88.4458gi|55859492|emb|AJ864475.1| Orpinomyces sp. OUS1 partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 28S rRNA, clone V5-1
87.5489Neocallimastix frontalis#1736 bp##rna