genelib report for 4002172, SFFH

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_namePiromyces sp E2
genus_speciesPiromyces sp
strainE2
source_librarysource_library_name
vector_name
source_dnasource_dna_namePisp_0002
source_dna_number4002172
source_dna_typeWhole Genome
seq_projectproject_number4002172
project_type2006 CSP
draft_analysis_group_des
deadline30-SEP-06
seq_librarylibrary_nameSFFH
library_type16s ribosomal Archaea
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size1.5
plates_expected
depth_target
insert_userdscott
date_entered20-JAN-06
seq_lib_vectorvector_namepCR4-TOPO_archaea
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114380
dna_received05-OCT-05
sample_description
ribosomal_profileEukaryote

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192524848N/A
Failed04440N/A

Contigs Output: 48

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
481

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(48)_SFFH42098.81068gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
99.1640gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
98.81068Neocallimastix frontalis#1736 bp##rna
99.1640Neocallimastix frontalis#1736 bp##rna
98.81068gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
99622gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
98.81068Neocallimastix sp.#1717 bp##rna
99622Neocallimastix sp.#1717 bp##rna
96.21099Neocallimastix joyonii#1532 bp##rna
98.4431Neocallimastix joyonii#1532 bp##rna
CLUSTER0(48)_SFFH42698.31068gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
99.1640gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
98.31068Neocallimastix frontalis#1736 bp##rna
99.1640Neocallimastix frontalis#1736 bp##rna
98.31068gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
99622gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
98.31068Neocallimastix sp.#1717 bp##rna
99622Neocallimastix sp.#1717 bp##rna
95.71099Neocallimastix joyonii#1532 bp##rna
98.4431Neocallimastix joyonii#1532 bp##rna
CLUSTER0(48)_SFFH43798.41068gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
99.1640gi|886690|emb|X80341.1|NF18SRRN N.frontalis L2 18S rRNA gene
98.41068Neocallimastix frontalis#1736 bp##rna
99.1640Neocallimastix frontalis#1736 bp##rna
98.41068gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
99622gi|168743|gb|M59761.1|NEORR18S Neocallimastix sp. LM-2 18S ribosomal RNA gene, partial sequence
98.41068Neocallimastix sp.#1717 bp##rna
99622Neocallimastix sp.#1717 bp##rna
95.81099Neocallimastix joyonii#1532 bp##rna
98.4431Neocallimastix joyonii#1532 bp##rna