genelib report for 4002217, SCPS

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeEnvironmental Sample
bio_classification_nameReactor Middle P8
genus_species
strain
source_librarysource_library_name
vector_name
source_dnasource_dna_nameEnv_0078
source_dna_number4002217
source_dna_typeMixture / Environmental
seq_projectproject_number4002217
project_typePilot Project
draft_analysis_group_des
deadline30-SEP-06
seq_librarylibrary_nameSCPS
library_type16s ribosomal Bacteria
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size1.5
plates_expected
depth_target
insert_userhtice
date_entered17-OCT-05
seq_lib_vectorvector_namepCR4-TOPO_eubacteria
shadow_parentlibrary_name
accountaccount_no626883
account_nameCloning Technology, GT Program
account_groupaccount_groupPROGRAMS ACCOUNTS
institutioncode_name
samplesample_number114425
dna_received
sample_description
ribosomal_profileEnvironmental

Processing Summary:

Reads Input: 768

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed768356355355249
Failed02810106

Contigs Output: 249

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
301
141
121
101
51
41
36
216
1124

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER26(30)_SCPS38694.51446mesophilic anaerobic BSA digester clone BSA1B-12 AB175366.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.21449mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.61448-temperature biodegraded Canadian oil reservoir clone PL-10B5 AY570596.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.71046anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
96.6205anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
95.4153anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
94.41047anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
96.1205anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.4153anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER26(30)_SCPS40394.51445mesophilic anaerobic BSA digester clone BSA1B-12 AB175366.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.31448mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.61447-temperature biodegraded Canadian oil reservoir clone PL-10B5 AY570596.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.81046anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
96.6205anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
95.4151anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
94.51047anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
96.1205anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.4151anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER26(30)_SCPS54194.51446mesophilic anaerobic BSA digester clone BSA1B-12 AB175366.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.31449mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.61448-temperature biodegraded Canadian oil reservoir clone PL-10B5 AY570596.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.81046anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
96.6205anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
95.4153anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
94.51047anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
96.1205anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.4153anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER1(14)_SCPS38597.11467feedlot manure clone B32 AF317369.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
96.31475Atopostipes suicloacalis str. PPC79 AF445248.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
96.11398feedlot manure clone B5 AF317373.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
91.91198Vagococcus sp. clone ckl17 AY080979.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
91.91198Enterococcus sp. clone ckl18 AY080981.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
CLUSTER1(14)_SCPS73597.11467feedlot manure clone B32 AF317369.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
96.31475Atopostipes suicloacalis str. PPC79 AF445248.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
96.11398feedlot manure clone B5 AF317373.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
91.81198Vagococcus sp. clone ckl17 AY080979.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
91.81198Enterococcus sp. clone ckl18 AY080981.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
CLUSTER28(12)_SCPS49594.11449-temperature biodegraded Canadian oil reservoir clone PL-7B6 AY570574.1 (Bacteria; Bacteroidetes; Bacteroidales)
941449-temperature biodegraded Canadian oil reservoir clone PL-7B81 AY570640.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.61432Hudson river sediment clone Z17 AY754840.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.61449SHA-7 clone AJ249109.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.21447-temperature biodegraded Canadian oil reservoir clone PL-37B4 AY570629.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER28(12)_SCPS70094.11449-temperature biodegraded Canadian oil reservoir clone PL-7B6 AY570574.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.11449-temperature biodegraded Canadian oil reservoir clone PL-7B81 AY570640.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.61432Hudson river sediment clone Z17 AY754840.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.71449SHA-7 clone AJ249109.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.31447-temperature biodegraded Canadian oil reservoir clone PL-37B4 AY570629.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER43(10)_SCPS49291.81368Mono Lake at depth 35 m station 6 July 2000 clone ML635J-44 bacterium AF507864.1 (Bacteria; Bacteroidetes)
91.3987CFB group clone ML1228J-16 AF449766.1 (Bacteria; Bacteroidetes)
90.1425CFB group clone ML1228J-16 AF449766.1 (Bacteria; Bacteroidetes)
91.1961CFB group clone ML1228M-4 AF449769.1 (Bacteria; Bacteroidetes)
91423CFB group clone ML1228M-4 AF449769.1 (Bacteria; Bacteroidetes)
93753CFB group clone ML1228J-9 AF449768.1 (Bacteria; Bacteroidetes)
91234CFB group clone ML1228J-9 AF449768.1 (Bacteria; Bacteroidetes)
96.6117CFB group clone ML1228J-9 AF449768.1 (Bacteria; Bacteroidetes)
97.2107CFB group clone ML1228J-9 AF449768.1 (Bacteria; Bacteroidetes)
91.5780Mono Lake at depth 35 m station 6 July 2000 clone ML635J-56 AF507862.1 (Bacteria; Bacteroidetes)
89.6425Mono Lake at depth 35 m station 6 July 2000 clone ML635J-56 AF507862.1 (Bacteria; Bacteroidetes)
92.9197Mono Lake at depth 35 m station 6 July 2000 clone ML635J-56 AF507862.1 (Bacteria; Bacteroidetes)
CLUSTER43(10)_SCPS49991.81368Mono Lake at depth 35 m station 6 July 2000 clone ML635J-44 bacterium AF507864.1 (Bacteria; Bacteroidetes)
90.9982CFB group clone ML1228J-16 AF449766.1 (Bacteria; Bacteroidetes)
90.1426CFB group clone ML1228J-16 AF449766.1 (Bacteria; Bacteroidetes)
92.7753CFB group clone ML1228J-9 AF449768.1 (Bacteria; Bacteroidetes)
91234CFB group clone ML1228J-9 AF449768.1 (Bacteria; Bacteroidetes)
96.6117CFB group clone ML1228J-9 AF449768.1 (Bacteria; Bacteroidetes)
97.2108CFB group clone ML1228J-9 AF449768.1 (Bacteria; Bacteroidetes)
91.3780Mono Lake at depth 35 m station 6 July 2000 clone ML635J-56 AF507862.1 (Bacteria; Bacteroidetes)
89.7426Mono Lake at depth 35 m station 6 July 2000 clone ML635J-56 AF507862.1 (Bacteria; Bacteroidetes)
92.1190Mono Lake at depth 35 m station 6 July 2000 clone ML635J-56 AF507862.1 (Bacteria; Bacteroidetes)
89772-temperature biodegraded Canadian oil reservoir clone PL-32B9 AY570618.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.4426-temperature biodegraded Canadian oil reservoir clone PL-32B9 AY570618.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER13(5)_SCPS46592.51242TCE-dechlorinating groundwater clone TANB25 AY667255.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
921245Acholeplasma species L33734.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
95.3982Acholeplasma morum str. 72-043 AY538168.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
96.4220Acholeplasma morum str. 72-043 AY538168.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
88.1134Acholeplasma morum str. 72-043 AY538168.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
95987Acholeplasma brassicae str. 0502 AY538163.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
95222Acholeplasma brassicae str. 0502 AY538163.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
941003Acholeplasma vituli str. FC-097 AF031479.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
96.4220Acholeplasma vituli str. FC-097 AF031479.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
CLUSTER51(4)_SCPS57294.81376Bacteroides eggerthii L16485.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
94.91342Bacteroides eggerthii str. DSM 20697T AB050107.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
93.31245-temperature biodegraded Canadian oil reservoir clone PL-26B10 AY570561.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
90.6149-temperature biodegraded Canadian oil reservoir clone PL-26B10 AY570561.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
95.3903Bacteroides uniformis str. JCM 5828T AB050110.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
95404Bacteroides uniformis str. JCM 5828T AB050110.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
95.2903adult human fecal matter clone adhufec153 AF132240.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
94.2312adult human fecal matter clone adhufec153 AF132240.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
CLUSTER12(3)_SCPS40590.71235Acholeplasma morum str. 72-043 AY538168.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.21208Acholeplasma axanthum str. S-743(T) AF412968.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.21208Acholeplasma axanthum str. 118 AJ311394.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.81241Acholeplasma parvum str. H23M AY538170.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
91.7975Acholeplasma cavigenitalium str. GP3 AY538164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.3215Acholeplasma cavigenitalium str. GP3 AY538164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
CLUSTER38(3)_SCPS43596.11445mesophilic anaerobic BSA digester clone BSA2B-11 AB175383.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.91445mesophilic anaerobic BSA digester clone BSA2B-12 AB175384.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.41247rumen clone F24-F06 AB185627.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.591rumen clone F24-F06 AB185627.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.31247rumen clone F24-H12 AB185656.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.999rumen clone F24-H12 AB185656.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.8763rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.6444rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.692rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER54(3)_SCPS38988.6765adult human fecal matter clone adhufec303 AF132259.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
90.6435adult human fecal matter clone adhufec303 AF132259.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
88.5776Bacteroides sp. str. SA-11 AY695842.1 (Bacteria; Bacteroidetes; Bacteroidales)
84.5245Bacteroides sp. str. SA-11 AY695842.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.9132Bacteroides sp. str. SA-11 AY695842.1 (Bacteria; Bacteroidetes; Bacteroidales)
88.2780mesophilic anaerobic BSA digester clone BSA2B-11 AB175383.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.7111mesophilic anaerobic BSA digester clone BSA2B-11 AB175383.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.3104mesophilic anaerobic BSA digester clone BSA2B-11 AB175383.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.2712mesophilic anaerobic BSA digester clone BSA2B-12 AB175384.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.7111mesophilic anaerobic BSA digester clone BSA2B-12 AB175384.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.3104mesophilic anaerobic BSA digester clone BSA2B-12 AB175384.1 (Bacteria; Bacteroidetes; Bacteroidales)
87.1766Bacteroides thetaiotaomicron VPI-5482 NC_004663.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
90.7432Bacteroides thetaiotaomicron VPI-5482 NC_004663.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
CLUSTER55(3)_SCPS52794.81413Anaerobic sludge clone S28 AB195875.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.61427Anaerobic sludge clone S17 AB195877.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.61425Bacteroides sp. str. sp14 AB003390.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.81405sp. BN3 AY570690.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.71409Anaerobic sludge clone S11 AB195874.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER89(3)_SCPS58597.71423Clostridium lituseburense M59107.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
97.71418phylotype OTU-165 swine intestine clone p-478-o2 AF371691.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
981371rumen clone F23-F06 AB185550.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
981372rumen clone F24-D12 AB185612.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
96.21422Clostridium bifermentans str. TYR6; DSM 13560 AF320283.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
CLUSTER9(3)_SCPS40189.41005Acholeplasma vituli str. FC-097 AF031479.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.1211Acholeplasma vituli str. FC-097 AF031479.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.7989Acholeplasma morum str. 72-043 AY538168.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
87.9224Acholeplasma morum str. 72-043 AY538168.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
91.2831TCE-dechlorinating groundwater clone TANB25 AY667255.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.1222TCE-dechlorinating groundwater clone TANB25 AY667255.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
97.2106TCE-dechlorinating groundwater clone TANB25 AY667255.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.5846Acholeplasma axanthum str. S-743(T) AF412968.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
87.5216Acholeplasma axanthum str. S-743(T) AF412968.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
98.1106Acholeplasma axanthum str. S-743(T) AF412968.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.5846Acholeplasma axanthum str. 118 AJ311394.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
87.5216Acholeplasma axanthum str. 118 AJ311394.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
98.1106Acholeplasma axanthum str. 118 AJ311394.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
CLUSTER106(2)_SCPS611951453mesophilic anaerobic BSA digester clone BSA2B-10 AB175382.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91988termite gut clone Rs-056 AB100478.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.5770Waste-gas biofilter clone BIri47 AJ318164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.1392Waste-gas biofilter clone BIri47 AJ318164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.3770Clostridium termitidis X71854.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.1393Clostridium termitidis X71854.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.3770Clostridium cellobioparum X71856.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.3393Clostridium cellobioparum X71856.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER11(2)_SCPS41390.61261Mycoplasma feliminutum U16758.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.31380Acholeplasma parvum str. H23M AY538170.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.81234Acholeplasma morum str. 72-043 AY538168.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.41251Acholeplasma vituli str. FC-097 AF031479.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
91.3997Acholeplasma brassicae str. 0502 AY538163.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.9179Acholeplasma brassicae str. 0502 AY538163.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
CLUSTER112(2)_SCPS58295.21383Waste-gas biofilter clone BIri47 AJ318164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
95.71366anoxic bulk soil flooded rice microcosm clone BSV72 clone AJ229216.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
93.81267Clostridium sp. str. RCel1 Y15986.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
94.31221Clostridium termitidis X71854.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
94.21221Clostridium cellobioparum X71856.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER126(2)_SCPS56092.11336phylotype OTU-389 swine intestine clone p-5459-2Wb5 AF371947.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
90.51372Faecalibacterium prausnitzii AY169429.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
90.71348phylotype OTU-184 swine intestine clone p-2559-9F5 AF371715.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
90.21372Faecalibacterium prausnitzii AY169430.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
91.41167Acetanaerobacterium elongatum str. Z7 AY487928.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
CLUSTER23(2)_SCPS63591.1620fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
92.2333fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.4222fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
86.2740genotype: vanB isolate str. MLG055 AF304435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
88.5217genotype: vanB isolate str. MLG055 AF304435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.2185genotype: vanB isolate str. MLG055 AF304435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.4405rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
92213rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.9161rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.4128rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
96.687rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
87.7432Clostridium paraputrificum X75907.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
89181Clostridium paraputrificum X75907.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
91.1135Clostridium paraputrificum X75907.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
86.7165Clostridium paraputrificum X75907.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
88.6405rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
92.1215rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.3161rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
94.897rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.3140rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
CLUSTER29(2)_SCPS72598.21268mesophilic anaerobic BSA digester clone BSA1B-12 AB175366.1 (Bacteria; Bacteroidetes; Bacteroidales)
97.3149mesophilic anaerobic BSA digester clone BSA1B-12 AB175366.1 (Bacteria; Bacteroidetes; Bacteroidales)
98.21268mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.4151mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.21446anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
951447anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.11447-temperature biodegraded Canadian oil reservoir clone PL-10B5 AY570596.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER3(2)_SCPS45297.31300-temperature biodegraded Canadian oil reservoir clone PL-37B5 AY570568.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
97.21300chlorobenzene-degrading consortium clone IB-11 AJ488077.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
97.21300polychlorinated dioxin dechlorinating microcosm clone TSAT08 AB186876.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
95.487polychlorinated dioxin dechlorinating microcosm clone TSAT08 AB186876.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
97.21300-temperature biodegraded Canadian oil reservoir clone PL-1B5 AY570603.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
95.487-temperature biodegraded Canadian oil reservoir clone PL-1B5 AY570603.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
97.21300-temperature biodegraded Canadian oil reservoir clone PL-1B9 AY570584.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
95.487-temperature biodegraded Canadian oil reservoir clone PL-1B9 AY570584.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
CLUSTER39(2)_SCPS62994.31443-temperature biodegraded Canadian oil reservoir clone PL-7B5 AY570638.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.21443-temperature biodegraded Canadian oil reservoir clone PL-11B8 AY570582.1 (Bacteria; Bacteroidetes; Bacteroidales)
87.3892termite gut homogenate clone Rs-D44 bacterium AB088930.1 (Bacteria; Bacteroidetes; Bacteroidales)
86.3240termite gut homogenate clone Rs-D44 bacterium AB088930.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.8490hydrothermal vent sediment clone CS_B045 AF419687.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.2434hydrothermal vent sediment clone CS_B045 AF419687.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.1217hydrothermal vent sediment clone CS_B045 AF419687.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.8429chlorobenzene-degrading consortium clone IA-5 AJ488076.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.1272chlorobenzene-degrading consortium clone IA-5 AJ488076.1 (Bacteria; Bacteroidetes; Bacteroidales)
92213chlorobenzene-degrading consortium clone IA-5 AJ488076.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.895chlorobenzene-degrading consortium clone IA-5 AJ488076.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER4(2)_SCPS464961418Lactosphaera pasteurii X87150.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
961418Trichococcus collinsii str. 37AN3 AJ306612.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
961415Lactosphaera sp. str. PMagG1 AF394926.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
961412polychlorinated dioxin dechlorinating microcosm clone TSAS07 AB186870.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
961412polychlorinated dioxin dechlorinating microcosm clone TSAS12 AB186871.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae)
CLUSTER41(2)_SCPS46892.51265hindgut homogenate Pachnoda ephippiata larva clone PeH22 AJ576339.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.9960termite intestinal tract clone COB P4-1 AY160848.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.4419termite intestinal tract clone COB P4-1 AY160848.1 (Bacteria; Bacteroidetes; Bacteroidales)
88.4791rumen clone F24-G02 AB185635.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.9428rumen clone F24-G02 AB185635.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.1435bacterioplankton clone ZA2626c AF382107.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.2305bacterioplankton clone ZA2626c AF382107.1 (Bacteria; Bacteroidetes; Bacteroidales)
87.8222bacterioplankton clone ZA2626c AF382107.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.1116bacterioplankton clone ZA2626c AF382107.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.3447cow rumen clone BF8 AY244886.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.3323cow rumen clone BF8 AY244886.1 (Bacteria; Bacteroidetes; Bacteroidales)
88.7373cow rumen clone BF8 AY244886.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER44(2)_SCPS40791.6438chlorobenzene-degrading consortium clone IA-12 AJ488069.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.3172chlorobenzene-degrading consortium clone IA-12 AJ488069.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.4130chlorobenzene-degrading consortium clone IA-12 AJ488069.1 (Bacteria; Bacteroidetes; Bacteroidales)
94116chlorobenzene-degrading consortium clone IA-12 AJ488069.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.8439-temperature biodegraded Canadian oil reservoir clone PL-7B81 AY570640.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.9164-temperature biodegraded Canadian oil reservoir clone PL-7B81 AY570640.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.4130-temperature biodegraded Canadian oil reservoir clone PL-7B81 AY570640.1 (Bacteria; Bacteroidetes; Bacteroidales)
94116-temperature biodegraded Canadian oil reservoir clone PL-7B81 AY570640.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.8439-temperature biodegraded Canadian oil reservoir clone PL-7B6 AY570574.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.9164-temperature biodegraded Canadian oil reservoir clone PL-7B6 AY570574.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.4130-temperature biodegraded Canadian oil reservoir clone PL-7B6 AY570574.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.8116-temperature biodegraded Canadian oil reservoir clone PL-7B6 AY570574.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.5434chlorobenzene-degrading consortium clone IIB-27 AJ488087.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.3172chlorobenzene-degrading consortium clone IIB-27 AJ488087.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.4130chlorobenzene-degrading consortium clone IIB-27 AJ488087.1 (Bacteria; Bacteroidetes; Bacteroidales)
94116chlorobenzene-degrading consortium clone IIB-27 AJ488087.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.4441Rumen isolate str. YS3 AF544208.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.5130Rumen isolate str. YS3 AF544208.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.1116Rumen isolate str. YS3 AF544208.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER52(2)_SCPS69491754rumen clone F23-B12 AB185524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
94.5419rumen clone F23-B12 AB185524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
91.3127rumen clone F23-B12 AB185524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
90.7754rumen clone U28-H12 AB185739.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
96.6207rumen clone U28-H12 AB185739.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
98.3179rumen clone U28-H12 AB185739.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
91.3127rumen clone U28-H12 AB185739.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
90.1761rumen clone RFN64 bacterium AB009211.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
93.1391rumen clone RFN64 bacterium AB009211.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
93.8515rumen clone 12-129 AF018497.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
94.8427rumen clone 12-129 AF018497.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
90.6233rumen clone 12-129 AF018497.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
90.3154rumen clone 12-129 AF018497.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
92.3444Bacteroides sp. AR20 AF139524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
91354Bacteroides sp. AR20 AF139524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
99.2126Bacteroides sp. AR20 AF139524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
91.4152Bacteroides sp. AR20 AF139524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
89173Bacteroides sp. AR20 AF139524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
CLUSTER56(2)_SCPS63695.41405sp. BN3 AY570690.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.41406Anaerobic sludge clone S28 AB195875.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.11431Bacteroides sp. sp4 AB003389.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.11431Anaerobic sludge clone S17 AB195877.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.31406Anaerobic sludge clone S11 AB195874.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER80(2)_SCPS74392.61475Desulfovibrio subsp. desulfuricans str. MB; ATCC27774 subsp. AF192154.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
92.51475Desulfovibrio intestinalis Y12254.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
92.51476iron-reducing clone Core-3 AB111106.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
92.31364Desulfovibrio intestinalis str. JG-G12 AJ295680.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
901475Desulfovibrio vulgaris str. I5 AY362360.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
CLUSTER82(2)_SCPS70195.11411-temperature biodegraded Canadian oil reservoir clone PL-11B10 AY570581.1 (Bacteria)
91.8522chemocline clone 331 AJ536840.1 (Bacteria)
89.8371chemocline clone 331 AJ536840.1 (Bacteria)
94.9217chemocline clone 331 AJ536840.1 (Bacteria)
91.8522chemocline clone 361 AJ536841.1 (Bacteria)
90371chemocline clone 361 AJ536841.1 (Bacteria)
94.9217chemocline clone 361 AJ536841.1 (Bacteria)
87.6501hydrocarbon seep clone BPC076 AF154096.1 (Bacteria; Proteobacteria; Delta proteobacteria)
86.4169hydrocarbon seep clone BPC076 AF154096.1 (Bacteria; Proteobacteria; Delta proteobacteria)
86.6501fatty acid-degrading consortium clone FA-PB16 AY586399.1 (Bacteria; Proteobacteria; Delta proteobacteria; Syntrophaceae)
85.3218fatty acid-degrading consortium clone FA-PB16 AY586399.1 (Bacteria; Proteobacteria; Delta proteobacteria; Syntrophaceae)
CLUSTER88(2)_SCPS73399.61419rumen clone F23-F06 AB185550.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
99.41424rumen clone F24-D12 AB185612.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
98.91418phylotype OTU-165 swine intestine clone p-478-o2 AF371691.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
981423Clostridium lituseburense M59107.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
97.21421rat feces clone rc3-1 AY239427.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
CLUSTER10(1)_SCPS40489.9922Acholeplasma morum str. 72-043 AY538168.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
87.9224Acholeplasma morum str. 72-043 AY538168.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.5921Acholeplasma vituli str. FC-097 AF031479.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
89.1211Acholeplasma vituli str. FC-097 AF031479.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
91748TCE-dechlorinating groundwater clone TANB25 AY667255.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.1222TCE-dechlorinating groundwater clone TANB25 AY667255.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
97.2106TCE-dechlorinating groundwater clone TANB25 AY667255.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.4761Acholeplasma cavigenitalium str. GP3 AY538164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
94.2173Acholeplasma cavigenitalium str. GP3 AY538164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
97.2106Acholeplasma cavigenitalium str. GP3 AY538164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.1766Acholeplasma axanthum str. S-743(T) AF412968.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
87.5216Acholeplasma axanthum str. S-743(T) AF412968.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
98.1106Acholeplasma axanthum str. S-743(T) AF412968.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
CLUSTER100(1)_SCPS50390.31323rumen clone U29-C06 AB185766.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
901326faeces isolate str. L2-50 AJ270491.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
90.11312phylotype OTU-97 swine intestine clone p-1895-s962-3 AF371650.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
89.61331rumen clone U29-E11 AB185789.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
90.21321rumen clone U29-C01 AB185762.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
CLUSTER101(1)_SCPS50594.61376TCE-dechlorinating groundwater clone TANB5 AY667250.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.31376hindgut homogenate Pachnoda ephippiata larva clone PeH31 AJ576348.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.61354phylotype OTU-355 swine intestine clone p-4247-4Wa3 AF371679.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
95.71252Clostridium lactatifermentans str. G17 AY033434.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
95.41294TCE-dechlorinating microbial community clone 4C AY217423.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER102(1)_SCPS72394.91354phylotype OTU-355 swine intestine clone p-4247-4Wa3 AF371679.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.31375TCE-dechlorinating groundwater clone TANB5 AY667250.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
95.61248Clostridium lactatifermentans str. G17 AY033434.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
95.41294TCE-dechlorinating microbial community clone 4C AY217423.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
95.21248hindgut homogenate Pachnoda ephippiata larva clone PeH31 AJ576348.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER103(1)_SCPS62389.71297phylotype OTU-154 swine intestine clone p-4936-6Wb2 AF371932.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
891318human colonic clone HuCB15 AJ408995.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
891273rat feces clone rc1-30 AY239422.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
87.61297mpn-isolate group 26 AF357574.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
87.61297Clostridium sp. str. 75064 AF227826.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
CLUSTER104(1)_SCPS63997.21399phylotype OTU-153 swine intestine clone p-2194-s959-3 AF371843.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
97.11398phylotype OTU-153 swine intestine clone p-1965-s959-5 AF371844.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
96.51401Clostridium sp. str. L15 AY337519.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
96.31397Clostridium vincentii X97432.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
96.21398Clostridium roseum str. DSM 51 Y18171.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium)
CLUSTER105(1)_SCPS67094.61261Clostridium sp. 9B4 AY554416.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium botulinum et al.)
97.684Clostridium sp. 9B4 AY554416.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium botulinum et al.)
94.71264-temperature biodegraded Canadian oil reservoir clone PL-35B7 AY570625.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium botulinum et al.)
96.585-temperature biodegraded Canadian oil reservoir clone PL-35B7 AY570625.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium botulinum et al.)
94.51261Clostridium sp. 13A1 AY554421.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium botulinum et al.)
97.684Clostridium sp. 13A1 AY554421.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae; Clostridium botulinum et al.)
92.11261Clostridium putrefaciens str. DSM 1291 AF127024.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae)
92.11261cow rumen clone BS26 AY244977.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae)
CLUSTER107(1)_SCPS51496.71371bovine teat canal clone B-11 AY676481.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
93.81232MCB-contaminated groundwater-treating reactor clone RB9C5 AF407395.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
93.81232MCB-contaminated groundwater-treating reactor clone RB13C12 AF407415.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
93.61232MCB-contaminated groundwater-treating reactor clone RA13C1 AF407398.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
93.61232MCB-contaminated groundwater-treating reactor clone RB13C1 AF407408.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER108(1)_SCPS61695.81304feedlot manure clone B4 AF317372.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.41244MCB-contaminated groundwater-treating reactor clone RB13C12 AF407415.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.51240MCB-contaminated groundwater-treating reactor clone RA13C3 AF407403.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.11244MCB-contaminated groundwater-treating reactor clone RA13C1 AF407398.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.11244MCB-contaminated groundwater-treating reactor clone RB9C5 AF407395.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER109(1)_SCPS64593.3746feedlot manure clone B4 AF317372.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
93301feedlot manure clone B4 AF317372.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.1751bovine teat canal clone B-87 AY676487.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.8450bovine teat canal clone B-87 AY676487.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.8748bovine teat canal clone B-11 AY676481.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.5452bovine teat canal clone B-11 AY676481.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.8772MCB-contaminated groundwater-treating reactor clone RB13C12 AF407415.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.3469MCB-contaminated groundwater-treating reactor clone RB13C12 AF407415.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.7772MCB-contaminated groundwater-treating reactor clone RB9C5 AF407395.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.8469MCB-contaminated groundwater-treating reactor clone RB9C5 AF407395.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER110(1)_SCPS65892.5746feedlot manure clone B4 AF317372.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.1293feedlot manure clone B4 AF317372.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.2751bovine teat canal clone B-87 AY676487.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
93.1406bovine teat canal clone B-87 AY676487.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.8748bovine teat canal clone B-11 AY676481.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.2408bovine teat canal clone B-11 AY676481.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
89.2771MCB-contaminated groundwater-treating reactor clone RA13C3 AF407403.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.2454MCB-contaminated groundwater-treating reactor clone RA13C3 AF407403.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
87.6788phylotype OTU-321 swine intestine clone p-3261-42A2 AF371828.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
87.6340phylotype OTU-321 swine intestine clone p-3261-42A2 AF371828.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER111(1)_SCPS44995.41321anoxic bulk soil flooded rice microcosm clone BSV72 clone AJ229216.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
94.51321Waste-gas biofilter clone BIri47 AJ318164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.71323Clostridium thermosuccinogenes str. DSM 5807 Y18180.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
94.11210Clostridium termitidis X71854.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
941210Clostridium cellobioparum X71856.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER113(1)_SCPS55095.31364methanogenic landfill leachate bioreactor clone AC051 AY336985.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
95.41357methanogenic landfill leachate bioreactor clone AC044 AY336984.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
93.11362Clostridium stercorarium str. DSM 8532T AJ310082.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.81381Clostridium stercorarium subsp. leptospartum str. ATCC 35414 subsp. AF266461.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.51381Clostridium stercorarium subsp. thermolacticum X72870.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER114(1)_SCPS66292.21427methanogenic landfill leachate bioreactor clone AC033 AY330125.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.21427methanogenic landfill leachate bioreactor clone AC020 AY330124.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.81429Clostridium straminisolvens str. CSK1 AB125279.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.41430Clostridium aldrichii X71846.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.61362Acetivibrio cellulolyticus L35515.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER115(1)_SCPS43091.61268termite gut clone Rs-066 AB100471.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
91.81265rumen clone 4C28d-12 AB034126.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
90.51381rumen clone U29-A04 AB185742.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
921215Clostridium sp. str. EBR-02E-0045 AB186359.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
90.51382rumen clone U29-H11 AB185816.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER116(1)_SCPS44091.31264rumen clone U29-A04 AB185742.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
91.31265rumen clone U29-H11 AB185816.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.31200phylotype OTU-321 swine intestine clone p-3261-42A2 AF371828.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
89.31377rat feces clone rc3-19(2) AY239457.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
91.51218Clostridium sp. str. EBR-02E-0045 AB186359.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER117(1)_SCPS54794.81398phylotype OTU-150 swine intestine clone p-2406-55G5 AF371824.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.61462rat feces clone rc3-19(2) AY239457.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.61312phylotype OTU-108 swine intestine clone p-2573-9F5 AF371823.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.81304phylotype OTU-321 swine intestine clone p-3261-42A2 AF371828.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.81196phylotype OTU-279 swine intestine clone p-3024-SwA5 AF371827.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER118(1)_SCPS73895.71400phylotype OTU-150 swine intestine clone p-2406-55G5 AF371824.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.61459rat feces clone rc3-19(2) AY239457.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.51317phylotype OTU-321 swine intestine clone p-3261-42A2 AF371828.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.41316phylotype OTU-108 swine intestine clone p-2573-9F5 AF371823.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
95.81200phylotype OTU-279 swine intestine clone p-3024-SwA5 AF371827.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER119(1)_SCPS64894.9742Clostridium sp. str. EBR-02E-0045 AB186359.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91435Clostridium sp. str. EBR-02E-0045 AB186359.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
94.9739Acetivibrio cellulolyticus L35515.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.3436Acetivibrio cellulolyticus L35515.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
94.9739Acetivibrio cellulolyticus L35516.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
91.3436Acetivibrio cellulolyticus L35516.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
94.4749uranium-contaminated aquifer clone 1013-28-CG46 AY532583.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.6376uranium-contaminated aquifer clone 1013-28-CG46 AY532583.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
94.3754Clostridium straminisolvens str. CSK1 AB125279.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.2435Clostridium straminisolvens str. CSK1 AB125279.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER120(1)_SCPS74893.41158termite gut homogenate clone Rs-N95 bacterium AB088964.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.1879termite gut clone Rs-066 AB100471.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
96.2346termite gut clone Rs-066 AB100471.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.9891termite gut homogenate clone Rs-G02 AB089023.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
90.8337termite gut homogenate clone Rs-G02 AB089023.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
89.81119unidentified eubacterium clone BSV07 AJ229181.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Clostridiaceae)
94.4766termite gut homogenate clone Rs-B73 bacterium AB089027.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
90.8346termite gut homogenate clone Rs-B73 bacterium AB089027.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER121(1)_SCPS64292.31163termite gut clone Rs-092 AB100470.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.21012termite gut homogenate clone Rs-N95 bacterium AB088964.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
97.893termite gut homogenate clone Rs-N95 bacterium AB088964.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
91.71012termite gut clone Rs-109 AB100469.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
97.891termite gut clone Rs-109 AB100469.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94766termite gut homogenate clone Rs-K07 AB089024.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
96.5202termite gut homogenate clone Rs-K07 AB089024.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
10093termite gut homogenate clone Rs-K07 AB089024.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.7741methanogenic landfill leachate bioreactor clone AC033 AY330125.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
96.5201methanogenic landfill leachate bioreactor clone AC033 AY330125.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.7178methanogenic landfill leachate bioreactor clone AC033 AY330125.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER122(1)_SCPS42394.81371subsurface soil clone S-F26 AY622268.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
93.11369rumen clone 3C0d-3 AB034003.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
94.41242phylotype OTU-126 swine intestine clone p-2484-18B5 AF371769.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
93.71164termite gut homogenate clone Rs-Q53 bacterium AB089034.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
93.91138termite gut homogenate clone Rs-P37 bacterium AB088967.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
CLUSTER123(1)_SCPS75996.51240phylotype OTU-286 swine intestine clone p-2850-6C5 AF371757.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
93.3150phylotype OTU-286 swine intestine clone p-2850-6C5 AF371757.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
92.31262chlorobenzene-degrading consortium clone IB-18 AJ488078.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
91.71256-temperature biodegraded Canadian oil reservoir clone PL-38B12 AY570589.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
90.51373Ruminococcus albus str. OR108 AF030452.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
92.21195adult human fecal matter clone adhufec101 AF132235.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
CLUSTER124(1)_SCPS68095.51232phylotype OTU-243 swine intestine clone p-1699-b3 AF371741.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
93.11194phylotype OTU-348 swine intestine clone p-4177-6Wa5 AF371739.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
93.11194human colonic clone HuCA1 AJ408957.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
90.11360phylotype OTU-111 swine intestine clone p-810-a5 AF371737.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
90.71230Eubacterium siraeum L34625.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER125(1)_SCPS47493.5970phylotype OTU-345 swine intestine clone p-4067-6Wa3 AF371735.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
94.5347phylotype OTU-345 swine intestine clone p-4067-6Wa3 AF371735.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
91.1794Anaerofilum pentosovorans X97852.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
92.2437Anaerofilum pentosovorans X97852.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
98.7149Anaerofilum pentosovorans X97852.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
90.7796Anaerofilum agile X98011.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
92.2437Anaerofilum agile X98011.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
98149Anaerofilum agile X98011.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
90.6805Elbe River snow isolate Iso15_5 Iso15_5_1454 snow AF150697.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
92.7436Elbe River snow isolate Iso15_5 Iso15_5_1454 snow AF150697.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
98149Elbe River snow isolate Iso15_5 Iso15_5_1454 snow AF150697.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
90.8802phylotype OTU-389 swine intestine clone p-5459-2Wb5 AF371947.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
93.7603phylotype OTU-389 swine intestine clone p-5459-2Wb5 AF371947.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
CLUSTER127(1)_SCPS66691.71315phylotype OTU-389 swine intestine clone p-5459-2Wb5 AF371947.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
90.41327phylotype OTU-184 swine intestine clone p-2559-9F5 AF371715.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
901373Faecalibacterium prausnitzii AY169429.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
91.31166Acetanaerobacterium elongatum str. Z7 AY487928.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
90.81158rat feces clone rc4-32 AY239452.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus)
CLUSTER128(1)_SCPS69693.41361phylotype OTU-107 swine intestine clone p-1749-b3 AF371733.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
93.31361phylotype OTU-107 swine intestine clone p-2203-s959-3 AF371729.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
93.21361butyrate-producing M21/2 AY305307.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
93.21361phylotype OTU-107 swine intestine clone p-1706-b3 AF371726.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
93.11371Faecalibacterium prausnitzii str. L2-6 AJ270470.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Anaerofilum)
CLUSTER129(1)_SCPS43297.11404phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.71405phylotype OTU-133 swine intestine clone p-2600-9F5 AF371783.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.51405phylotype OTU-133 swine intestine clone p-2625-9F5 AF371782.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.31405phylotype OTU-133 swine intestine clone p-1497-b5 AF371789.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.91341phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER130(1)_SCPS44596.41403phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.31405phylotype OTU-133 swine intestine clone p-2600-9F5 AF371783.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.81405phylotype OTU-133 swine intestine clone p-1497-b5 AF371789.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.41402phylotype OTU-133 swine intestine clone p-397-o3 AF371785.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.91342swine intestine clone p_5014-2Wa5 AF371934.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER131(1)_SCPS54897.61403phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.81405phylotype OTU-133 swine intestine clone p-882-a5 AF371788.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.51229phylotype OTU-133 swine intestine clone p-2179-s959-3 AF371787.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
10083phylotype OTU-133 swine intestine clone p-2179-s959-3 AF371787.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.41229phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
10083phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.81316phylotype OTU-132 swine intestine clone p-2479-18B5 AF371792.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER132(1)_SCPS68898.51229phylotype OTU-133 swine intestine clone p-2577-9F5 AF371784.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.884phylotype OTU-133 swine intestine clone p-2577-9F5 AF371784.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.41229phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.883phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.41229phylotype OTU-133 swine intestine clone p-2600-9F5 AF371783.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.884phylotype OTU-133 swine intestine clone p-2600-9F5 AF371783.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.11229phylotype OTU-133 swine intestine clone p-2625-9F5 AF371782.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.884phylotype OTU-133 swine intestine clone p-2625-9F5 AF371782.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.11229phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.881phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER133(1)_SCPS44496.91343phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.91410phylotype OTU-133 swine intestine clone p-882-a5 AF371788.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.41341phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.41341phylotype OTU-133 swine intestine clone p-2179-s959-3 AF371787.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.71229phylotype OTU-133 swine intestine clone p-2625-9F5 AF371782.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.788phylotype OTU-133 swine intestine clone p-2625-9F5 AF371782.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER134(1)_SCPS53797.91229phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.990phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.71229phylotype OTU-133 swine intestine clone p-2577-9F5 AF371784.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.987phylotype OTU-133 swine intestine clone p-2577-9F5 AF371784.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.51229phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.883phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.51229phylotype OTU-133 swine intestine clone p-2600-9F5 AF371783.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.987phylotype OTU-133 swine intestine clone p-2600-9F5 AF371783.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.51229phylotype OTU-133 swine intestine clone p-2179-s959-3 AF371787.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.883phylotype OTU-133 swine intestine clone p-2179-s959-3 AF371787.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER135(1)_SCPS56197.71344phylotype OTU-133 swine intestine clone p-2600-9F5 AF371783.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.51344phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.31343phylotype OTU-133 swine intestine clone p-2625-9F5 AF371782.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.31341phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.31341phylotype OTU-133 swine intestine clone p-2179-s959-3 AF371787.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER136(1)_SCPS75797.11405phylotype OTU-133 swine intestine clone p-2600-9F5 AF371783.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.91405phylotype OTU-133 swine intestine clone p-2625-9F5 AF371782.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
971405phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.41405phylotype OTU-133 swine intestine clone p-882-a5 AF371788.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.31405phylotype OTU-133 swine intestine clone p-1497-b5 AF371789.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER137(1)_SCPS58995.81405phylotype OTU-133 swine intestine clone p-2600-9F5 AF371783.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.71405phylotype OTU-133 swine intestine clone p-882-a5 AF371788.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.61405phylotype OTU-133 swine intestine clone p-1497-b5 AF371789.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.21341phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.21341phylotype OTU-133 swine intestine clone p-2179-s959-3 AF371787.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER138(1)_SCPS55496.91403phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.91403phylotype OTU-133 swine intestine clone p-2179-s959-3 AF371787.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.51403phylotype OTU-133 swine intestine clone p-882-a5 AF371788.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.61232phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.4153phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.41233phylotype OTU-133 swine intestine clone p-2577-9F5 AF371784.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.5154phylotype OTU-133 swine intestine clone p-2577-9F5 AF371784.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER139(1)_SCPS60496.31406phylotype OTU-133 swine intestine clone p-882-a5 AF371788.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.11341phylotype OTU-133 swine intestine clone p-2179-s959-3 AF371787.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.91341phylotype OTU-133 swine intestine clone p-2215-s959-3 AF371786.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.81406phylotype OTU-133 swine intestine clone p-1497-b5 AF371789.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.41405phylotype OTU-133 swine intestine clone p-2577-9F5 AF371784.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER14(1)_SCPS48194.21389Erysipelothrix rhusiopathiae str. Pecs 56 AB055907.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Erysipelothrix)
94.21389Erysipelothrix inopinata str. 143-02 AJ550617.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Erysipelothrix)
93.81349Erysipelothrix rhusiopathiae str. ATCC 19414 AB034200.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Erysipelothrix)
93.81349Erysipelothrix rhusiopathiae str. ATCC 19414 AB055905.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Erysipelothrix)
93.81349Erysipelothrix rhusiopathiae str. 715 AB055908.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Erysipelothrix)
CLUSTER140(1)_SCPS66196.71345phylotype OTU-133 swine intestine clone p-2628-9F5 AF371781.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.51406phylotype OTU-133 swine intestine clone p-882-a5 AF371788.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.21406phylotype OTU-133 swine intestine clone p-1497-b5 AF371789.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.61343equine manure clone wet70 AY212772.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
951381phylotype OTU-132 swine intestine clone p-2479-18B5 AF371792.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER141(1)_SCPS46097.41367human colonic clone HuCB7 AJ408991.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.21349phylotype OTU-137 swine intestine clone p-2053-s959-5 AF371800.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
951449phylotype OTU-260 swine intestine clone p-953-s962-5 AF371799.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.41367adult human fecal matter clone adhufec269 AF132255.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.61326rumen clone 4C28d-4 AB034125.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER142(1)_SCPS55994.61371anaerobic digestor clone BA18 AF129861.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.71254anaerobic digestor clone HB31 AF129863.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
98.882anaerobic digestor clone HB31 AF129863.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.31237Lachnospiraceae bacterium 19gly4 AF550610.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.483Lachnospiraceae bacterium 19gly4 AF550610.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
93.81332rumen clone U28-G07 AB185726.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
93.81329adult human fecal matter clone adhufec311 AF132261.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER143(1)_SCPS65495.11251anaerobic digestor clone BA18 AF129861.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.11246anaerobic digestor clone HB31 AF129863.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
97.683anaerobic digestor clone HB31 AF129863.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
95.11233rumen clone F24-B10 AB185589.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
94.71256anaerobic digestor clone CA26 AF129862.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
96.586anaerobic digestor clone CA26 AF129862.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
94.51220rumen clone U28-G07 AB185726.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER144(1)_SCPS62094.2946phylotype OTU-393 swine intestine clone p-5460-2Wb5 AF371948.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
92.6963Clostridium orbiscindens str. DSM 6740 Y18187.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
92.6963Clostridium orbiscindens str. NML 00--082 AY730663.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
92.6963Clostridium orbiscindens str. NML 00--095 AY730664.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
92.6963Clostridium orbiscindens str. NML 01--077 AY730665.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Sporobacter)
CLUSTER145(1)_SCPS46294.71195phylotype OTU-146 swine intestine clone p-1651-c5 AF371776.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.21189phylotype OTU-145 swine intestine clone p-1528-b5 AF371777.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.51240rumen clone F24-A06 AB185579.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
90.61298contaminated aquifer clone WCHB1-54 AF050582.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.692contaminated aquifer clone WCHB1-54 AF050582.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.9987rumen clone U29-D05 AB185776.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.9226rumen clone U29-D05 AB185776.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER146(1)_SCPS69393.11196phylotype OTU-146 swine intestine clone p-1651-c5 AF371776.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
90.91005rumen clone U29-D05 AB185776.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
95.7207rumen clone U29-D05 AB185776.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.9636contaminated aquifer clone WCHB1-54 AF050582.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
90.4586contaminated aquifer clone WCHB1-54 AF050582.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.8593phylotype OTU-145 swine intestine clone p-1528-b5 AF371777.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.9588phylotype OTU-145 swine intestine clone p-1528-b5 AF371777.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92636rumen clone F24-A06 AB185579.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
91.5589rumen clone F24-A06 AB185579.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER147(1)_SCPS71995.21400phylotype OTU-333 swine intestine clone p-1565-b5 AF371820.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.21382rumen clone RF34 AF001765.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.11388phylotype OTU-314 swine intestine clone p-1062-a5 AF371815.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.21375rumen clone RFN16 bacterium AB009175.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
91.61376rumen clone U28-B05 AB185671.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER148(1)_SCPS75696.61402phylotype OTU-333 swine intestine clone p-1565-b5 AF371820.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.51381rumen clone RF34 AF001765.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.31377rumen clone RF6 AF001739.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
93.51363rat feces clone rc2-9 AY239435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.51390phylotype OTU-307 swine intestine clone p-3188-SwA-3 AF371816.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER149(1)_SCPS45892.41252rumen clone U29-G07 AB185805.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
92.51252rumen clone RFN8 bacterium AB009227.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
92.31252rumen clone F23-F11 AB185554.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
92.41253rumen clone U29-B09 AB185758.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
92.51240rumen clone RC5 AF001698.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
CLUSTER15(1)_SCPS43889.7447Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
95.6137Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
91.7169Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
83.6213Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
87146Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.7447Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
90.5169Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85213Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
87146Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.5448Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
90.5169Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85.9213Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
87.7146Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.7448Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
90.5169Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85.2210Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
87.7146Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.5447Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
90.5169Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85.9213Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
87.7146Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
CLUSTER150(1)_SCPS73294.71382cow rumen clone BS6 AY244960.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
94.31377rumen clone U28-D08 AB185694.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
94.31377rumen clone U28-E11 AB185709.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
94.31376rumen clone U28-F11 AB185719.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
94.31378rumen clone U28-A08 AB185663.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; gut clone group)
CLUSTER151(1)_SCPS57394.41477contaminated aquifer clone WCHB1-71 AF050585.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Syntrophomonadaceae)
94.61428enrichment marine sediment clone A3 AY540494.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Syntrophomonadaceae)
941474polychlorinated dioxin dechlorinating microcosm clone TSAC15 AB186860.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Syntrophomonadaceae)
941474polychlorinated dioxin dechlorinating microcosm clone TSBW01 AB186861.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Syntrophomonadaceae)
94.51389TCE-dechlorinating groundwater clone TANB7 AY667252.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Syntrophomonadaceae)
CLUSTER152(1)_SCPS64990.41020gold mine clone DSBACT72 AY762633.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Desulfotomaculum)
90.7226gold mine clone DSBACT72 AY762633.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Desulfotomaculum)
94.5788Dehalobacterium formicoaceticum X86690.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac)
92.8461Dehalobacterium formicoaceticum X86690.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac)
91980Pelotomaculum sp. str. MGP AB154390.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Desulfotomaculum)
89227Pelotomaculum sp. str. MGP AB154390.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Desulfotomaculum)
90.31024enrichment marine sediment clone A8 AY540498.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Desulfotomaculum)
94.6167enrichment marine sediment clone A8 AY540498.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Desulfotomaculum)
90.21020borehole water gold mine clone TTMF7 AY741711.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Desulfotomaculum)
90.7226borehole water gold mine clone TTMF7 AY741711.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Desulfotomaculum)
CLUSTER16(1)_SCPS52189.7446Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
86.1352Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
95.6137Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85213Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.7446Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85.8344Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85.9213Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.5446Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85.8352Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
86.9213Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.5446Staphylococcus capitis subsp. ureolyticus str. ATCC 49326T AB009937.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85.8352Staphylococcus capitis subsp. ureolyticus str. ATCC 49326T AB009937.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
86.4213Staphylococcus capitis subsp. ureolyticus str. ATCC 49326T AB009937.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus capitis subsp. ureolyticus str. ATCC 49326T AB009937.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.5446Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85.8352Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
86.9213Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
CLUSTER17(1)_SCPS60389.7447Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
95.6137Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
91.7169Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85213Staphylococcus felis D83364.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.7447Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
90.5169Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
85.9213Staphylococcus capitis str. JPL-2 AY030321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.5448Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
90.5169Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
86.9213Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
87146Staphylococcus epidermidis str. AB111112 AF397060.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.7448Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
90.5169Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
86.2210Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
87146Staphylococcus sp. clone Tminor20 AF467410.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
89.5447Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
90.5169Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
86.9213Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
92.7137Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
87146Staphylococcus epidermidis D83362.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Staphylococcus)
CLUSTER18(1)_SCPS43690.91260phylotype OTU-276 swine intestine clone p-3025-SwA5 AF371528.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
90.1943phylotype OTU-322 swine intestine clone p-3133-SwA3 AF371529.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.1229phylotype OTU-322 swine intestine clone p-3133-SwA3 AF371529.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
90.3899rat feces clone rc2-12 AY239433.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
90.3175rat feces clone rc2-12 AY239433.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
88.11030phylotype OTU-275 swine intestine clone p-3053-SwA5 AF371526.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.2113phylotype OTU-275 swine intestine clone p-3053-SwA5 AF371526.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.8888rumen clone RF8 AF001741.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
90.2235rumen clone RF8 AF001741.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
CLUSTER19(1)_SCPS71191.1795rumen clone RF39 AF001770.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
87.1442rumen clone RF39 AF001770.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.2895phylotype OTU-275 swine intestine clone p-3053-SwA5 AF371526.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
88.3446phylotype OTU-275 swine intestine clone p-3053-SwA5 AF371526.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89896phylotype OTU-182 swine intestine clone p-2013-s959-5 AF371522.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
90.7408phylotype OTU-182 swine intestine clone p-2013-s959-5 AF371522.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.7796tongue dorsum scrapings clone FM046 AF432140.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
87.2390tongue dorsum scrapings clone FM046 AF432140.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
88.4907adult human fecal matter clone adhufec202 AF132232.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
90.8404adult human fecal matter clone adhufec202 AF132232.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
CLUSTER2(1)_SCPS644971466feedlot manure clone B32 AF317369.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
96.61474Atopostipes suicloacalis str. PPC79 AF445248.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
96.31397feedlot manure clone B5 AF317373.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
92.51260Marinilactibacillus psychrotolerans str. INCT119 AB159717.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
90.4156Marinilactibacillus psychrotolerans str. INCT119 AB159717.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
91.71199Vagococcus sp. clone ckl17 AY080979.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
CLUSTER20(1)_SCPS49393.1432fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
92.2333fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
93.8225fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
95.9145fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
87.9454Bacillus funiculus str. NAF001 AB049195.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
94215Bacillus funiculus str. NAF001 AB049195.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
93.1145Bacillus funiculus str. NAF001 AB049195.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
96.894Bacillus funiculus str. NAF001 AB049195.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
89.7398Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
93214Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
91.7145Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
10082Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
89.4398Bacillus anthracis str. Ames NC_003997.3 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
90.8206Bacillus anthracis str. Ames NC_003997.3 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
91.7145Bacillus anthracis str. Ames NC_003997.3 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
10082Bacillus anthracis str. Ames NC_003997.3 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
89.4398Bacillus anthracis str. Ames 0581 NC_007530.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
90.8206Bacillus anthracis str. Ames 0581 NC_007530.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
91.7145Bacillus anthracis str. Ames 0581 NC_007530.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
10082Bacillus anthracis str. Ames 0581 NC_007530.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
CLUSTER21(1)_SCPS53393.1432fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.9333fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
93.8225fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
95.9145fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.7398Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
93214Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
91.7145Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
10082Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
88449Bacillus funiculus str. NAF001 AB049195.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
94215Bacillus funiculus str. NAF001 AB049195.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
93.1145Bacillus funiculus str. NAF001 AB049195.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
96.894Bacillus funiculus str. NAF001 AB049195.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
89.1405rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
94.4215rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
90.6128rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
96.687rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.4398Bacillus sp. str. OS-5 AJ296095.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Sporolactobacillaceae)
86.4324Bacillus sp. str. OS-5 AJ296095.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Sporolactobacillaceae)
89.7214Bacillus sp. str. OS-5 AJ296095.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Sporolactobacillaceae)
94.5109Bacillus sp. str. OS-5 AJ296095.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Sporolactobacillaceae)
CLUSTER22(1)_SCPS69293.4394fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
92.2333fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
92.9225fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
95.2145fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.4398Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
92.1214Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
91145Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
10082Bacillus sp. str. HZ12 AY690710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
90.5370pasture soil clone EB1073 AY395392.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Geobacteraceae)
93.1145pasture soil clone EB1073 AY395392.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Geobacteraceae)
86.3161pasture soil clone EB1073 AY395392.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Geobacteraceae)
83.8198pasture soil clone EB1073 AY395392.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Geobacteraceae)
89.2398Bacillus anthracis str. Ames NC_003997.3 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
89.8206Bacillus anthracis str. Ames NC_003997.3 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
91145Bacillus anthracis str. Ames NC_003997.3 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
10082Bacillus anthracis str. Ames NC_003997.3 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
89.2398Bacillus anthracis str. Ames 0581 NC_007530.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
89.8206Bacillus anthracis str. Ames 0581 NC_007530.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
91145Bacillus anthracis str. Ames 0581 NC_007530.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
10082Bacillus anthracis str. Ames 0581 NC_007530.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
CLUSTER24(1)_SCPS76090.1593fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
92.2333fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.4222fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
86.2740genotype: vanB isolate str. MLG055 AF304435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
88.5217genotype: vanB isolate str. MLG055 AF304435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.1156genotype: vanB isolate str. MLG055 AF304435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.6375rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
92213rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.3173rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.4128rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
95.487rumen clone RFN20 bacterium AB009179.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.1375rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
92.1215rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
90.8173rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.3140rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
93.897rumen clone RFN74 bacterium AB009222.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
88.7371termite gut homogenate clone Rs-E61 bacterium AB088987.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
90.3145termite gut homogenate clone Rs-E61 bacterium AB088987.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
88.2161termite gut homogenate clone Rs-E61 bacterium AB088987.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
97.581termite gut homogenate clone Rs-E61 bacterium AB088987.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
83.2214termite gut homogenate clone Rs-E61 bacterium AB088987.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
CLUSTER25(1)_SCPS66589.6776fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
91.7206fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
97.3110fluidized bed anaerobic digestor fed vinasses (waste wine distillery) clone vadinHA31 U81729.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
87.8753genotype: vanB isolate str. MLG055 AF304435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
93227genotype: vanB isolate str. MLG055 AF304435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
94.5109genotype: vanB isolate str. MLG055 AF304435.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.9396Holdemania filiformis str. ATCC 51649 Y11466.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.4320Holdemania filiformis str. ATCC 51649 Y11466.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.8215Holdemania filiformis str. ATCC 51649 Y11466.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
95.5111Holdemania filiformis str. ATCC 51649 Y11466.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes)
89.6396phylotype OTU-355 swine intestine clone p-4247-4Wa3 AF371679.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
87.3347phylotype OTU-355 swine intestine clone p-4247-4Wa3 AF371679.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
89.4189phylotype OTU-355 swine intestine clone p-4247-4Wa3 AF371679.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
90379Lactobacillus salivarius subsp. salicinius str. JCM 1045 AY137586.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus animalis et al.)
85.7217Lactobacillus salivarius subsp. salicinius str. JCM 1045 AY137586.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus animalis et al.)
89.4151Lactobacillus salivarius subsp. salicinius str. JCM 1045 AY137586.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus animalis et al.)
CLUSTER27(1)_SCPS51394.21425mesophilic anaerobic BSA digester clone BSA1B-12 AB175366.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.91428mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.21427-temperature biodegraded Canadian oil reservoir clone PL-10B5 AY570596.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.81046anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
95.7184anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
95.4151anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
94.51047anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.1184anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.4151anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER30(1)_SCPS40091.21227rumen clone F23-F01 AB185549.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.11234mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.5831phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.3379phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.31022anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
93.6188anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
90.21023anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.1188anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER31(1)_SCPS62791.21242rumen clone F23-F01 AB185549.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.1780mesophilic anaerobic BSA digester clone BSA2B-11 AB175383.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.9445mesophilic anaerobic BSA digester clone BSA2B-11 AB175383.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.5780mesophilic anaerobic BSA digester clone BSA2B-12 AB175384.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.9445mesophilic anaerobic BSA digester clone BSA2B-12 AB175384.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.2774rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.8444rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.1776phylotype OTU-36 swine intestine clone p-262-o5 AF371922.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.7444phylotype OTU-36 swine intestine clone p-262-o5 AF371922.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER32(1)_SCPS75391.41243rumen clone F23-F01 AB185549.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.81249mesophilic anaerobic BSA digester clone BSA1B-12 AB175366.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.81249mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
96.1836phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.8379phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.1850-temperature biodegraded Canadian oil reservoir clone PL-10B5 AY570596.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.3382-temperature biodegraded Canadian oil reservoir clone PL-10B5 AY570596.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER33(1)_SCPS580911228rumen clone F23-F01 AB185549.1 (Bacteria; Bacteroidetes; Bacteroidales)
911228rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.91229rumen clone F24-F06 AB185627.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.81230rumen clone F24-H12 AB185656.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.6832phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.2385phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER34(1)_SCPS60289.91381mesophilic anaerobic BSA digester clone BSA2B-11 AB175383.1 (Bacteria; Bacteroidetes; Bacteroidales)
911257phylotype OTU-36 swine intestine clone p-262-o5 AF371922.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.61381mesophilic anaerobic BSA digester clone BSA2B-12 AB175384.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.11257rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.91259rumen clone F23-C09 AB185529.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER35(1)_SCPS683911257phylotype OTU-36 swine intestine clone p-262-o5 AF371922.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.51257rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.21259rumen clone F23-C09 AB185529.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.7837phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.3379phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.9776mesophilic anaerobic BSA digester clone BSA2B-11 AB175383.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.1444mesophilic anaerobic BSA digester clone BSA2B-11 AB175383.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER36(1)_SCPS76790.71230rumen clone F23-F01 AB185549.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.6774rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.6431rumen clone F23-C10 AB185530.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.1776phylotype OTU-36 swine intestine clone p-262-o5 AF371922.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.7430phylotype OTU-36 swine intestine clone p-262-o5 AF371922.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.2776rumen clone F23-C09 AB185529.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.6431rumen clone F23-C09 AB185529.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.7769rumen clone RF28 AF001760.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.4429rumen clone RF28 AF001760.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER37(1)_SCPS42190.7989phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.4197phylotype OTU-37 swine intestine clone p-2158-s959-3 AF371923.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.21004rumen clone F24-F06 AB185627.1 (Bacteria; Bacteroidetes; Bacteroidales)
91145rumen clone F24-F06 AB185627.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.2986rumen clone F23-F01 AB185549.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.7145rumen clone F23-F01 AB185549.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.21005rumen clone F24-H12 AB185656.1 (Bacteria; Bacteroidetes; Bacteroidales)
91145rumen clone F24-H12 AB185656.1 (Bacteria; Bacteroidetes; Bacteroidales)
90710rumen clone F23-G04 AB185558.1 (Bacteria; Bacteroidetes; Bacteroidales)
88.9441rumen clone F23-G04 AB185558.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER40(1)_SCPS71794.9842-temperature biodegraded Canadian oil reservoir clone PL-7B5 AY570638.1 (Bacteria; Bacteroidetes; Bacteroidales)
87.3583-temperature biodegraded Canadian oil reservoir clone PL-7B5 AY570638.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.7842-temperature biodegraded Canadian oil reservoir clone PL-11B8 AY570582.1 (Bacteria; Bacteroidetes; Bacteroidales)
87.1583-temperature biodegraded Canadian oil reservoir clone PL-11B8 AY570582.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.3731-temperature biodegraded Canadian oil reservoir clone PL-7B81 AY570640.1 (Bacteria; Bacteroidetes; Bacteroidales)
88.5200-temperature biodegraded Canadian oil reservoir clone PL-7B81 AY570640.1 (Bacteria; Bacteroidetes; Bacteroidales)
96.893-temperature biodegraded Canadian oil reservoir clone PL-7B81 AY570640.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.3731-temperature biodegraded Canadian oil reservoir clone PL-7B6 AY570574.1 (Bacteria; Bacteroidetes; Bacteroidales)
88.5200-temperature biodegraded Canadian oil reservoir clone PL-7B6 AY570574.1 (Bacteria; Bacteroidetes; Bacteroidales)
97.893-temperature biodegraded Canadian oil reservoir clone PL-7B6 AY570574.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.6731-temperature biodegraded Canadian oil reservoir clone PL-37B4 AY570629.1 (Bacteria; Bacteroidetes; Bacteroidales)
87.9199-temperature biodegraded Canadian oil reservoir clone PL-37B4 AY570629.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.693-temperature biodegraded Canadian oil reservoir clone PL-37B4 AY570629.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER42(1)_SCPS72191.9506hindgut homogenate Pachnoda ephippiata larva clone PeH22 AJ576339.1 (Bacteria; Bacteroidetes; Bacteroidales)
90412hindgut homogenate Pachnoda ephippiata larva clone PeH22 AJ576339.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.9224hindgut homogenate Pachnoda ephippiata larva clone PeH22 AJ576339.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.5152hindgut homogenate Pachnoda ephippiata larva clone PeH22 AJ576339.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.2414trichloroethene-contaminated site clone FTLpost3 bacterium AF529128.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.2375trichloroethene-contaminated site clone FTLpost3 bacterium AF529128.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.4368trichloroethene-contaminated site clone FTLpost3 bacterium AF529128.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.4412chlorobenzene-degrading consortium clone IA-5 AJ488076.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.4324chlorobenzene-degrading consortium clone IA-5 AJ488076.1 (Bacteria; Bacteroidetes; Bacteroidales)
93213chlorobenzene-degrading consortium clone IA-5 AJ488076.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.1118chlorobenzene-degrading consortium clone IA-5 AJ488076.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.2412fatty acid-degrading consortium clone FA-PB6 AY586396.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.2325fatty acid-degrading consortium clone FA-PB6 AY586396.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.2217fatty acid-degrading consortium clone FA-PB6 AY586396.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.7117fatty acid-degrading consortium clone FA-PB6 AY586396.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.2412-temperature biodegraded Canadian oil reservoir clone PL-32B9 AY570618.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.2325-temperature biodegraded Canadian oil reservoir clone PL-32B9 AY570618.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.2217-temperature biodegraded Canadian oil reservoir clone PL-32B9 AY570618.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.7117-temperature biodegraded Canadian oil reservoir clone PL-32B9 AY570618.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER45(1)_SCPS55789.41256hydrothermal vent 9 degrees North East Rise Pacific Ocean clone CH5_3f_BAC_16SrRNA_9N_EPR AY672529.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.4978Mono Lake at depth 35 m station 6 July 2000 clone ML635J-15 bacterium AF507869.2 (Bacteria; Bacteroidetes; Bacteroidales)
92.8223Mono Lake at depth 35 m station 6 July 2000 clone ML635J-15 bacterium AF507869.2 (Bacteria; Bacteroidetes; Bacteroidales)
90.5966deep-sea sediment clone BD1-16 AB015525.1 (Bacteria; Bacteroidetes; Bacteroidales)
87.6217deep-sea sediment clone BD1-16 AB015525.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.7151deep-sea sediment clone BD1-16 AB015525.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.8968polychlorinated dioxin dechlorinating microcosm clone TSBZ10 AB186818.1 (Bacteria; Bacteroidetes; Bacteroidales)
88.2186polychlorinated dioxin dechlorinating microcosm clone TSBZ10 AB186818.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.6829polychlorinated dioxin dechlorinating microcosm clone TSBb19 AB186819.1 (Bacteria; Bacteroidetes; Bacteroidales)
96.893polychlorinated dioxin dechlorinating microcosm clone TSBb19 AB186819.1 (Bacteria; Bacteroidetes; Bacteroidales)
85.5186polychlorinated dioxin dechlorinating microcosm clone TSBb19 AB186819.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER46(1)_SCPS70692.2982Marinilabilia agarovorans M62422.2 (Bacteria; Bacteroidetes; Bacteroidales; Marinilabilia)
94.6222Marinilabilia agarovorans M62422.2 (Bacteria; Bacteroidetes; Bacteroidales; Marinilabilia)
88.5980adult human fecal matter clone adhufec303 AF132259.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
89.4218adult human fecal matter clone adhufec303 AF132259.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
88.1947Koll-22 AJ224942.1 (Bacteria; Bacteroidetes; Flavobacteriales)
89.6231Koll-22 AJ224942.1 (Bacteria; Bacteroidetes; Flavobacteriales)
88.1947Koll-22 AJ224942.1 (Bacteria; Bacteroidetes; Flavobacteriales)
89.6231Koll-22 AJ224942.1 (Bacteria; Bacteroidetes; Flavobacteriales)
87947CFB group clone ML110J-35 AF452592.1 (Bacteria; Bacteroidetes)
91.7216CFB group clone ML110J-35 AF452592.1 (Bacteria; Bacteroidetes)
CLUSTER47(1)_SCPS55592.61265Myroides sp. SS1 AJ223454.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
90140Myroides sp. SS1 AJ223454.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
92.61266Myroides sp SS2 AJ223455.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
90.7140Myroides sp SS2 AJ223455.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
90.41372Cellulophaga sp. str. No. 62 AB180390.1 (Bacteria; Bacteroidetes; Flavobacteriales; Cytophaga)
90.11375Cytophaga lytica M62796.1 (Bacteria; Bacteroidetes; Flavobacteriales; Cytophaga)
921258soil clone F1C69 AY794084.1 (Bacteria; Bacteroidetes; Flavobacteriales; Cytophaga)
CLUSTER48(1)_SCPS699911440Myroides sp. SS1 AJ223454.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
90.31441Cellulophaga fucicola str. NN015860 () AJ005973.1 (Bacteria; Bacteroidetes; Flavobacteriales; Cytophaga)
921265Myroides sp SS2 AJ223455.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
90140Myroides sp SS2 AJ223455.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
90.51372Cellulophaga sp. str. No. 62 AB180390.1 (Bacteria; Bacteroidetes; Flavobacteriales; Cytophaga)
90.21375Cytophaga lytica M62796.1 (Bacteria; Bacteroidetes; Flavobacteriales; Cytophaga)
CLUSTER49(1)_SCPS65591.41431Myroides sp. SS1 AJ223454.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
91.31432Myroides sp SS2 AJ223455.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
90.11368Cytophaga lytica M62796.1 (Bacteria; Bacteroidetes; Flavobacteriales; Cytophaga)
90.51369deep-sea sediment clone MBMPE34 AJ567549.1 (Bacteria; Bacteroidetes; Flavobacteriales; Cytophaga)
91.71251soil clone F1C69 AY794084.1 (Bacteria; Bacteroidetes; Flavobacteriales; Cytophaga)
CLUSTER5(1)_SCPS62599.71394isopod gut clone RKPsBA AF395325.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
96.91481Enterococcus saccharolyticus str. ATCC43076 AF061004.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
96.51483Enterococcus gallinarum str. LMG 13129 AJ301833.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
96.81458Enterococcus saccharolyticus str. NCDO 2594T Y18357.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
96.41475Enterococcus gallinarum str. MG25 AF277567.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae)
CLUSTER50(1)_SCPS38792.6785faecal clone adhufec26.25 AF153869.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92.9253faecal clone adhufec26.25 AF153869.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92.6785adult human fecal matter clone adhufec151 AF132239.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
94.6349adult human fecal matter clone adhufec151 AF132239.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92.6785faecal clone adhufec26.25 AF153869.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92.9253faecal clone adhufec26.25 AF153869.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92.6766'New Zealand B' B AY721625.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
94.8446'New Zealand B' B AY721625.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92.2766isolate str. SMARLAB 84634 AY126616.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
96.2446isolate str. SMARLAB 84634 AY126616.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
CLUSTER53(1)_SCPS63490.71220rumen clone U28-H12 AB185739.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
88.8152rumen clone U28-H12 AB185739.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
92.21036rumen clone 12-129 AF018497.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
94.5181rumen clone 12-129 AF018497.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
92.9156rumen clone 12-129 AF018497.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
91.11029rumen clone F23-B12 AB185524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
99.3145rumen clone F23-B12 AB185524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
88.8152rumen clone F23-B12 AB185524.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
90.9789rumen clone RFN64 bacterium AB009211.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
94.5220rumen clone RFN64 bacterium AB009211.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
97.2144rumen clone RFN64 bacterium AB009211.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
92.6418rumen clone JW17 AF018446.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
89.9377rumen clone JW17 AF018446.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
96.5142rumen clone JW17 AF018446.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Prevotellaceae)
CLUSTER57(1)_SCPS55696.31414soil collected near uranium mill tailings Gittersee/Coschuetz clone Gitt-GS-109 AJ582209.1 (Bacteria; Bacteroidetes; Bacteroidales)
96.71347uranium mill tailing clone KF-Gitt2-47 AJ295642.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.31412Bacteroides sp. 22C AY554420.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.31413anaerobic digestor clone BB23 AF129860.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.31413anaerobic digestor clone BB23 AF129860.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER58(1)_SCPS622951416soil collected near uranium mill tailings Gittersee/Coschuetz clone Gitt-GS-109 AJ582209.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.41425Peptonophilum acidipropionici str. TB107 AY742226.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.91347uranium mill tailing clone KF-Gitt2-47 AJ295642.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.21414Anaerobic sludge clone S28 AB195875.1 (Bacteria; Bacteroidetes; Bacteroidales)
941425Bacteroides sp. sp4 AB003389.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER59(1)_SCPS64196.31422soil collected near uranium mill tailings Gittersee/Coschuetz clone Gitt-GS-109 AJ582209.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.81352uranium mill tailing clone KF-Gitt2-47 AJ295642.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.21430Bacteroides sp. 22C AY554420.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.11432anaerobic digestor clone BB23 AF129860.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.11432anaerobic digestor clone BB23 AF129860.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER6(1)_SCPS48996.91293Facklamia languida str. 1144-97 Y18053.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
88.4147Facklamia languida str. 1144-97 Y18053.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
95.11396Aerosphaera taetra str. CCUG 43036T AJ279038.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
96.41293Facklamia hominis str. ATCC 700628 Y10772.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
96.41209Facklamia miroungae AJ277381.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
91.7156Facklamia miroungae AJ277381.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
92.91421Facklamia sp. str. 164-92 Y15037.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae)
CLUSTER60(1)_SCPS69591.41373termite gut homogenate clone Rs-K10 bacterium AB088924.2 (Bacteria; Bacteroidetes; Bacteroidales)
911145hindgut homogenate Pachnoda ephippiata larva clone PeH23 AJ576340.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.2187hindgut homogenate Pachnoda ephippiata larva clone PeH23 AJ576340.1 (Bacteria; Bacteroidetes; Bacteroidales)
911145hindgut homogenate Pachnoda ephippiata larva clone PeH12 AJ576330.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.2187hindgut homogenate Pachnoda ephippiata larva clone PeH12 AJ576330.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.6909midgut homogenate Pachnoda ephippiata larva clone PeM14 AJ576384.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.5448midgut homogenate Pachnoda ephippiata larva clone PeM14 AJ576384.1 (Bacteria; Bacteroidetes; Bacteroidales)
89.61145termite gut homogenate clone Rs-B45 bacterium AB088942.2 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER61(1)_SCPS51092.6766adult human fecal matter clone adhufec303 AF132259.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
90432adult human fecal matter clone adhufec303 AF132259.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92.8760environmental isolate 31285 AF227834.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
90.7430environmental isolate 31285 AF227834.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
91.5106environmental isolate 31285 AF227834.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92.5760Bacteroides sp. str. WAL 11050 AY608697.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
90.9408Bacteroides sp. str. WAL 11050 AY608697.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
91.4105Bacteroides sp. str. WAL 11050 AY608697.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92758Bacteroides stercoris X83953.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
88.4337Bacteroides stercoris X83953.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
92758Bacteroides thetaiotaomicron VPI-5482 NC_004663.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
90.7432Bacteroides thetaiotaomicron VPI-5482 NC_004663.1 (Bacteria; Bacteroidetes; Bacteroidales; Bacteroides, Prevotella; Bacteroides)
CLUSTER62(1)_SCPS422941009phylotype OTU-6 swine intestine clone p-943-s962-5 AF371926.1 (Bacteria; Planctomycetes; "Pirellulae)
87.5160phylotype OTU-6 swine intestine clone p-943-s962-5 AF371926.1 (Bacteria; Planctomycetes; "Pirellulae)
93.91009phylotype OTU-6 swine intestine clone p-1088-a5 AF371925.1 (Bacteria; Planctomycetes; "Pirellulae)
87.5160phylotype OTU-6 swine intestine clone p-1088-a5 AF371925.1 (Bacteria; Planctomycetes; "Pirellulae)
89.8540anaerobic digester clone CY0ARA055B12 BX294897.1 (Bacteria; Planctomycetes; "Pirellulae)
88.7346anaerobic digester clone CY0ARA055B12 BX294897.1 (Bacteria; Planctomycetes; "Pirellulae)
88.3461termite gut homogenate clone Rs-E96 bacterium AB089118.2 (Bacteria; Planctomycetes; "Pirellulae)
87.3355termite gut homogenate clone Rs-E96 bacterium AB089118.2 (Bacteria; Planctomycetes; "Pirellulae)
97.4155termite gut homogenate clone Rs-E96 bacterium AB089118.2 (Bacteria; Planctomycetes; "Pirellulae)
88.1411DCP-dechlorinating consortium clone SHA-6 AJ306765.1 (Bacteria; Planctomycetes; "Pirellulae)
94.7150DCP-dechlorinating consortium clone SHA-6 AJ306765.1 (Bacteria; Planctomycetes; "Pirellulae)
CLUSTER63(1)_SCPS38891.41414TCE-dechlorinating groundwater clone TANB22 AY667254.1 (Bacteria; OP11; OP11-6)
93.31245contaminated aquifer clone WCHB1-64 AF050606.1 (Bacteria; OP11; OP11-6)
91.21416TCE-sediment clone d153 AF422676.1 (Bacteria; OP11; OP11-6)
89.6757hydrothermal vent sediment clone C1_B032 AF419694.1 (Bacteria; OP11)
87.8386hydrothermal vent sediment clone C1_B032 AF419694.1 (Bacteria; OP11)
86.5260TCE-dechlorinating groundwater clone TANB108 AY667267.1 (Bacteria)
CLUSTER64(1)_SCPS44691.7507isolate HuCC13 clone AJ315481.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
90.7344isolate HuCC13 clone AJ315481.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
94.7207isolate HuCC13 clone AJ315481.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
93.9213isolate HuCC13 clone AJ315481.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
91.7507human colonic clone HuCA18 AJ408970.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
92.7247human colonic clone HuCA18 AJ408970.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
94.8213human colonic clone HuCA18 AJ408970.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
94.7208human colonic clone HuCA18 AJ408970.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
91.5507Large intestine clone L10-6 AJ400275.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
93.1247Large intestine clone L10-6 AJ400275.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
94.8213Large intestine clone L10-6 AJ400275.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
94.2208Large intestine clone L10-6 AJ400275.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
91.5507Akkermansia muciniphila AY271254.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
91.5343Akkermansia muciniphila AY271254.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
94.8213Akkermansia muciniphila AY271254.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
94.2207Akkermansia muciniphila AY271254.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
93.6326water 10 m downstream manure clone 210ds10 AY212657.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
92.3208water 10 m downstream manure clone 210ds10 AY212657.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
90.7204water 10 m downstream manure clone 210ds10 AY212657.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
88209water 10 m downstream manure clone 210ds10 AY212657.1 (Bacteria; Verrucomicrobia; Verrucomicrobiae (1))
CLUSTER65(1)_SCPS53692.61031full-scale anaerobic UASB bioreactor treating paper mill wastewater clone B4 AY426449.1 (Bacteria; Verrucomicrobia)
98399full-scale anaerobic UASB bioreactor treating paper mill wastewater clone B4 AY426449.1 (Bacteria; Verrucomicrobia)
92.61029rumen clone BS5 AY244959.1 (Bacteria; Verrucomicrobia)
97397rumen clone BS5 AY244959.1 (Bacteria; Verrucomicrobia)
90.8761soil clone PBS-III-20 AJ390453.1 (Bacteria; Verrucomicrobia)
91.5213soil clone PBS-III-20 AJ390453.1 (Bacteria; Verrucomicrobia)
96.586soil clone PBS-III-20 AJ390453.1 (Bacteria; Verrucomicrobia)
86.7809Mono Lake clone ML635J-35 AF507896.1 (Bacteria; Verrucomicrobia; Verruco-5)
92.6242Mono Lake clone ML635J-35 AF507896.1 (Bacteria; Verrucomicrobia; Verruco-5)
89.4521Lake Waiau sediment clone W4-B19 AY345504.1 (Bacteria; Verrucomicrobia)
93.3252Lake Waiau sediment clone W4-B19 AY345504.1 (Bacteria; Verrucomicrobia)
88.4251Lake Waiau sediment clone W4-B19 AY345504.1 (Bacteria; Verrucomicrobia)
98.886Lake Waiau sediment clone W4-B19 AY345504.1 (Bacteria; Verrucomicrobia)
CLUSTER66(1)_SCPS54289.5955Mono Lake clone ML635J-35 AF507896.1 (Bacteria; Verrucomicrobia; Verruco-5)
93.8226Mono Lake clone ML635J-35 AF507896.1 (Bacteria; Verrucomicrobia; Verruco-5)
91.5564contaminated aquifer clone WCHB1-25 AF050559.1 (Bacteria; Verrucomicrobia; Verruco-5)
86.4359contaminated aquifer clone WCHB1-25 AF050559.1 (Bacteria; Verrucomicrobia; Verruco-5)
90.7204contaminated aquifer clone WCHB1-25 AF050559.1 (Bacteria; Verrucomicrobia; Verruco-5)
89.2631hydrothermal vent sediment clone B01R017 AY197386.1 (Bacteria; Verrucomicrobia; Verruco-5)
91.5212hydrothermal vent sediment clone B01R017 AY197386.1 (Bacteria; Verrucomicrobia; Verruco-5)
82.2348hydrothermal vent sediment clone B01R017 AY197386.1 (Bacteria; Verrucomicrobia; Verruco-5)
88.9640soil clone PBS-III-26 AJ390455.1 (Bacteria; Verrucomicrobia; Verruco-5)
90.7214soil clone PBS-III-26 AJ390455.1 (Bacteria; Verrucomicrobia; Verruco-5)
86.3197soil clone PBS-III-26 AJ390455.1 (Bacteria; Verrucomicrobia; Verruco-5)
90.2573rumen clone F23-G11 AB185563.1 (Bacteria; Verrucomicrobia; Verruco-5)
96.1207rumen clone F23-G11 AB185563.1 (Bacteria; Verrucomicrobia; Verruco-5)
89.4160rumen clone F23-G11 AB185563.1 (Bacteria; Verrucomicrobia; Verruco-5)
CLUSTER67(1)_SCPS73489.6902neutral pH mine biofilm clone 44a-B1-27 AY082462.1 (Bacteria; Verrucomicrobia; Verruco-5)
91199neutral pH mine biofilm clone 44a-B1-27 AY082462.1 (Bacteria; Verrucomicrobia; Verruco-5)
87.81004contaminated aquifer clone WCHB1-25 AF050559.1 (Bacteria; Verrucomicrobia; Verruco-5)
94.9215contaminated aquifer clone WCHB1-25 AF050559.1 (Bacteria; Verrucomicrobia; Verruco-5)
88.2811Mono Lake clone ML635J-35 AF507896.1 (Bacteria; Verrucomicrobia; Verruco-5)
94.3210Mono Lake clone ML635J-35 AF507896.1 (Bacteria; Verrucomicrobia; Verruco-5)
98101Mono Lake clone ML635J-35 AF507896.1 (Bacteria; Verrucomicrobia; Verruco-5)
89.1631hydrothermal vent sediment clone B01R017 AY197386.1 (Bacteria; Verrucomicrobia; Verruco-5)
94.4214hydrothermal vent sediment clone B01R017 AY197386.1 (Bacteria; Verrucomicrobia; Verruco-5)
81.3343hydrothermal vent sediment clone B01R017 AY197386.1 (Bacteria; Verrucomicrobia; Verruco-5)
87.9628anoxic marine sediment clone LD1-PA50 AY114328.1 (Bacteria; Verrucomicrobia; Verruco-5)
90320anoxic marine sediment clone LD1-PA50 AY114328.1 (Bacteria; Verrucomicrobia; Verruco-5)
90.5222anoxic marine sediment clone LD1-PA50 AY114328.1 (Bacteria; Verrucomicrobia; Verruco-5)
CLUSTER68(1)_SCPS48291.7470Fucophilus fucoidanolyticus AB073978.1 (Bacteria; Verrucomicrobia; Opitutae (4))
89.1349Fucophilus fucoidanolyticus AB073978.1 (Bacteria; Verrucomicrobia; Opitutae (4))
91.7240Fucophilus fucoidanolyticus AB073978.1 (Bacteria; Verrucomicrobia; Opitutae (4))
97.8139Fucophilus fucoidanolyticus AB073978.1 (Bacteria; Verrucomicrobia; Opitutae (4))
92.1454Lake Kauhako surface clone K2-S-20 AY344428.1 (Bacteria; Verrucomicrobia; Opitutae (4))
90.1355Lake Kauhako surface clone K2-S-20 AY344428.1 (Bacteria; Verrucomicrobia; Opitutae (4))
88.2338Lake Kauhako surface clone K2-S-20 AY344428.1 (Bacteria; Verrucomicrobia; Opitutae (4))
97.2144Lake Kauhako surface clone K2-S-20 AY344428.1 (Bacteria; Verrucomicrobia; Opitutae (4))
90.8467Opitutus sp. str. SA-9 AY695840.1 (Bacteria; Verrucomicrobia; Opitutae (4))
93.3240Opitutus sp. str. SA-9 AY695840.1 (Bacteria; Verrucomicrobia; Opitutae (4))
87.7334Opitutus sp. str. SA-9 AY695840.1 (Bacteria; Verrucomicrobia; Opitutae (4))
95.1144Opitutus sp. str. SA-9 AY695840.1 (Bacteria; Verrucomicrobia; Opitutae (4))
90.1467Opitutus sp. VeSm13 X99392.1 (Bacteria; Verrucomicrobia; Opitutae (4))
96.2210Opitutus sp. VeSm13 X99392.1 (Bacteria; Verrucomicrobia; Opitutae (4))
87.8327Opitutus sp. VeSm13 X99392.1 (Bacteria; Verrucomicrobia; Opitutae (4))
95.9148Opitutus sp. VeSm13 X99392.1 (Bacteria; Verrucomicrobia; Opitutae (4))
90.4449archaeological wood clone? pACH90 AY297806.1 (Bacteria; Verrucomicrobia; Opitutae (4))
96.2210archaeological wood clone? pACH90 AY297806.1 (Bacteria; Verrucomicrobia; Opitutae (4))
86.9327archaeological wood clone? pACH90 AY297806.1 (Bacteria; Verrucomicrobia; Opitutae (4))
95.3148archaeological wood clone? pACH90 AY297806.1 (Bacteria; Verrucomicrobia; Opitutae (4))
CLUSTER69(1)_SCPS74788.5366Desulfobacula toluolica X70953.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfobacteraceae)
92.8139Desulfobacula toluolica X70953.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfobacteraceae)
86.3183Desulfobacula toluolica X70953.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfobacteraceae)
88.5366Desulfobacula toluolica str. DSM 7467 AJ441316.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfobacteraceae)
92.8139Desulfobacula toluolica str. DSM 7467 AJ441316.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfobacteraceae)
85.8183Desulfobacula toluolica str. DSM 7467 AJ441316.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfobacteraceae)
88.3366Desulfobacula phenolica str. DSM 3384 marine mud AJ237606.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfobacteraceae)
92.8139Desulfobacula phenolica str. DSM 3384 marine mud AJ237606.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfobacteraceae)
86.3183Desulfobacula phenolica str. DSM 3384 marine mud AJ237606.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfobacteraceae)
90.3331lichen-dominated Antarctic cryptoendolithic community clone FBP269 AY250873.1 (Bacteria; Actinobacteria; Rubrobacteridae; Rubrobacteraceae)
85.1202lichen-dominated Antarctic cryptoendolithic community clone FBP269 AY250873.1 (Bacteria; Actinobacteria; Rubrobacteridae; Rubrobacteraceae)
88366Geopsychrobacter electrodiphilus str. A1 AY187303.2 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
95141Geopsychrobacter electrodiphilus str. A1 AY187303.2 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
89.4180Geopsychrobacter electrodiphilus str. A1 AY187303.2 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
CLUSTER7(1)_SCPS39093.21448Acholeplasma axanthum str. 118 AJ311394.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
93.11441Acholeplasma axanthum str. S-743(T) AF412968.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
93.71259Acholeplasma modicum M23933.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.81435Acholeplasma parvum str. H23M AY538170.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
90.91263TCE-dechlorinating groundwater clone TANB25 AY667255.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
CLUSTER70(1)_SCPS45699.21461P+ sludge clone SBR1011 AF204253.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales; Thauera)
99.11461Thauera sp. str. DNT-1 AB066262.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales; Thauera)
991463Thauera aminoaromatica str. S2 AJ315677.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales; Thauera)
98.81463-temperature biodegraded Canadian oil reservoir clone PL-34B4 AY570623.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales; Thauera)
98.81463-temperature biodegraded Canadian oil reservoir clone PL-4B6 AY570632.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales; Thauera)
CLUSTER71(1)_SCPS67192.91460isolate str. A1020 AF236013.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae)
92.61463bacterioplankton clone OCS7 AF001645.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae)
92.41460water 5 m downstream manure clone 227ds5 AY212674.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae)
92.51421isolate str. HJ12 AY237409.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae)
93.31341Massilia sp. str. 72 AY177372.2 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae)
CLUSTER72(1)_SCPS48896.71466Xanthomonas sp. str. 3C_3 AY689031.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales)
961467Stenotrophomonas sp. FB206 AY259519.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales)
95.71468ultramicrobacterium str. DY01 AB008508.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Lysobacter)
95.41468MM_2681 V4.BP.15 AJ244720.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
95.41466Stenotrophomonas sp. str. 12C_21 AY689084.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales)
CLUSTER73(1)_SCPS64798.61382bovine teat canal clone B-45 AY676483.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales)
94.61386fungal ascocarp clone Cl-9-TB8-II AY599707.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales)
94.11382Stenotrophomonas maltophilia str. e-a21 AJ293470.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
94.11382Stenotrophomonas maltophilia str. LMG 10989 AJ131907.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
94.11383soil clone Caf5 AF534190.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
CLUSTER74(1)_SCPS62196.71387Succinivibrio dextrinosolvens str. DSM 3072 Y17600.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Aeromonadales)
93.61204Anaerobiospirillum succiniciproducens str. ATCC 29305 U96412.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Aeromonadales)
89.3149Anaerobiospirillum succiniciproducens str. ATCC 29305 U96412.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Aeromonadales)
91.71359Anaerobiospirillum sp. str. 3J102 AF497809.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Aeromonadales)
96.5451Anaerobiospirillum sp. str. B0101 AF497808.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Aeromonadales)
89.6585Anaerobiospirillum sp. str. B0101 AF497808.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Aeromonadales)
91.9369Anaerobiospirillum sp. str. B0101 AF497808.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Aeromonadales)
88.7611water 10 m downstream manure clone 266ds10 AY212716.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria)
84.6338water 10 m downstream manure clone 266ds10 AY212716.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria)
88.5200water 10 m downstream manure clone 266ds10 AY212716.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria)
CLUSTER75(1)_SCPS51293748Stella vacuolata str. DSM5901 AJ535711.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Ellin314/wr0007)
93.4454Stella vacuolata str. DSM5901 AJ535711.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Ellin314/wr0007)
92.8749Rhodocista sp. AT2107 AJ401204.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Azospirillales; Azospirillaceae)
91.4453Rhodocista sp. AT2107 AJ401204.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Azospirillales; Azospirillaceae)
92.8750Rhodocista sp. AR2107 AJ401217.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Azospirillales; Azospirillaceae)
91.4453Rhodocista sp. AR2107 AJ401217.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Azospirillales; Azospirillaceae)
92.7742Azospirillum species Z29623.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Azospirillales; Azospirillaceae)
91.4453Azospirillum species Z29623.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Azospirillales; Azospirillaceae)
92.4748Rhodocista cetenaria D12701.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Azospirillales; Azospirillaceae)
89.4339Rhodocista cetenaria D12701.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Azospirillales; Azospirillaceae)
CLUSTER76(1)_SCPS768981388Brevundimonas diminuta X87274.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
97.81388Brevundimonas diminuta str. LMG 2089 (T) AJ227778.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
97.61385Brevundimonas diminuta M59064.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
97.41385Mycoplana sp. str. 6C_11 AY689051.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
97.91369deepest sea mud Mariana Trench clone AB002633.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
CLUSTER77(1)_SCPS69197.31401Pelobacter carbinolicus U23141.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
971420Pelobacter carbinolicus X79413.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
961470UASB reactor clone M76 AY692042.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
98.7966Pelobacter venetianus U41562.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
96.1382Pelobacter venetianus U41562.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
96.81013Desulfuromonas michiganensis str. BB1 AF357915.2 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
93.8434Desulfuromonas michiganensis str. BB1 AF357915.2 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfuromonadales; Desulfuromonadaceae/Pelobacter)
CLUSTER78(1)_SCPS65791.91299deep sea sediment clone NKB19 AB013271.1 (Bacteria; NKB19)
92.31258anaerobic TCB-dechlorinating consortium clone SJP-2 AJ387899.1 (Bacteria; NKB19)
91.31259lab-scale sludge clone SBRH70 AF268995.1 (Bacteria; NKB19)
92.3142lab-scale sludge clone SBRH70 AF268995.1 (Bacteria; NKB19)
911014anaerobic TCB-dechlorinating consortium clone SJP-3 AJ387900.1 (Bacteria; NKB19)
87.7227anaerobic TCB-dechlorinating consortium clone SJP-3 AJ387900.1 (Bacteria; NKB19)
87.89174MB-degrading consortium clone UASB_TL9 AF254389.1 (Bacteria; Proteobacteria; Delta proteobacteria; Syntrophaceae)
862074MB-degrading consortium clone UASB_TL9 AF254389.1 (Bacteria; Proteobacteria; Delta proteobacteria; Syntrophaceae)
CLUSTER79(1)_SCPS50289.71304termite gut homogenate clone Rs-K75 AB089105.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
89.11235Desulfovibrio oryzae str. DDv AF273083.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
89.11235Desulfovibrio sp. str. A2 AY770382.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
891235Desulfovibrio sp. Bsl2 AY570691.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
891235Desulfovibrio sp. str. JG5 AJ295679.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
CLUSTER8(1)_SCPS48393.11387Acholeplasma axanthum str. S-743(T) AF412968.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
93.11387Acholeplasma axanthum str. 118 AJ311394.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
94.41246Acholeplasma cavigenitalium str. GP3 AY538164.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
93.81253Acholeplasma modicum M23933.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
92.21251Acholeplasma vituli str. FC-097 AF031479.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Mollicutes; Acholeplasmatales)
CLUSTER81(1)_SCPS53192.61403Desulfovibrio intestinalis Y12254.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
92.61403Desulfovibrio subsp. desulfuricans str. MB; ATCC27774 subsp. AF192154.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
92.51404iron-reducing clone Core-3 AB111106.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
92.31291Desulfovibrio intestinalis str. JG-G12 AJ295680.1 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
89.91393Desulfovibrio subsp. vulgaris str. Hildenborough AE017309.2 (Bacteria; Proteobacteria; Delta proteobacteria; Desulfovibrionales)
CLUSTER83(1)_SCPS523921226thermophilic anaerobic municipal solid waste digester clone MBA03 AB114313.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
94968Mono Lake at depth 35m station 6 July 2000 clone ML635J-38 G+C AF507890.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
94235Mono Lake at depth 35m station 6 July 2000 clone ML635J-38 G+C AF507890.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
93.8968Mono Lake at depth 35m station 6 July 2000 clone ML635J-14 G+C AF507891.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
94235Mono Lake at depth 35m station 6 July 2000 clone ML635J-14 G+C AF507891.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
93.8968thermophilic anaerobic municipal solid waste digester clone MBA04 AB114314.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
91.8231thermophilic anaerobic municipal solid waste digester clone MBA04 AB114314.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
93.7968thermophilic anaerobic municipal solid waste digester clone MBNA04 AB114323.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
92.4236thermophilic anaerobic municipal solid waste digester clone MBNA04 AB114323.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
CLUSTER84(1)_SCPS61489.9965compost clone 4-21 AB034709.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae)
92213compost clone 4-21 AB034709.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae)
89.9965compost clone 4-20 AB034708.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae)
92213compost clone 4-20 AB034708.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae)
90.3867Mono Lake at depth 35m station 6 July 2000 clone ML635J-14 G+C AF507891.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
92.9280Mono Lake at depth 35m station 6 July 2000 clone ML635J-14 G+C AF507891.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
90.3867Mono Lake at depth 35m station 6 July 2000 clone ML635J-38 G+C AF507890.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
92.9280Mono Lake at depth 35m station 6 July 2000 clone ML635J-38 G+C AF507890.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes)
87.8987G+C gram-positive clone SHD-209 AJ278163.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
92.5147G+C gram-positive clone SHD-209 AJ278163.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
CLUSTER85(1)_SCPS57896.91290phylotype OTU-199 swine intestine clone p-2464-18B5 AF371707.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
94.489phylotype OTU-199 swine intestine clone p-2464-18B5 AF371707.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
941422Phascolarctobacterium faecium X72867.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
93.71017cow rumen clone BF7 AY244885.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
90.5262cow rumen clone BF7 AY244885.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
93.71017cow rumen clone BF14 AY244892.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
91.2262cow rumen clone BF14 AY244892.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
93.71018cow rumen clone BF11 AY244889.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
92.5227cow rumen clone BF11 AY244889.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
CLUSTER86(1)_SCPS71395.41463phylotype OTU-200 swine intestine clone p-369-a3 AF371706.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
951473phylotype OTU-200 swine intestine clone p-286-a3 AF371705.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
96.91291phylotype OTU-199 swine intestine clone p-2464-18B5 AF371707.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
94.489phylotype OTU-199 swine intestine clone p-2464-18B5 AF371707.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
93.91482Phascolarctobacterium faecium X72867.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
94.5996Acidaminococcus sp. str. ADV 255.99 AF473835.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
93.7252Acidaminococcus sp. str. ADV 255.99 AF473835.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptococcaceae/Acidaminococcac; Acidaminococcaceae)
CLUSTER87(1)_SCPS39798.91418phylotype OTU-165 swine intestine clone p-478-o2 AF371691.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
98.71419rumen clone F23-F06 AB185550.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
98.51424rumen clone F24-D12 AB185612.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
97.81423Clostridium lituseburense M59107.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
96.61421rat feces clone rc3-1 AY239427.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Peptostreptococcus)
CLUSTER90(1)_SCPS54994.91362UASB reactor clone M116 AY692050.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
951250monoxenic Trimyema compressum clone TC8 AB118593.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
10084monoxenic Trimyema compressum clone TC8 AB118593.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
941321termite intestinal tract clone COB P1-16 AY160817.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
951250microbial fuel cell enriched with acetate clone 45#2 AY491543.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
98.883microbial fuel cell enriched with acetate clone 45#2 AY491543.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
92.21417-temperature biodegraded Canadian oil reservoir clone PL-38B5 AY570590.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Mogibacterium)
CLUSTER91(1)_SCPS471981376Clostridium species X75909.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Tissierella)
95.71265Clostridium hastiforme X80841.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Tissierella)
90.1142Clostridium hastiforme X80841.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Tissierella)
95.41265Clostridium hastiforme X77848.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Tissierella)
97.892Clostridium hastiforme X77848.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Tissierella)
95.91206Tissierella praeacuta X80832.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Tissierella)
90.5137Tissierella praeacuta X80832.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae; Tissierella)
931378acetate-enriched initiated inoculation digester sludge which had been used to treat cassava starch wastewater supplemented with 0.05% acetic acid clone Eub No. 6 AF395426.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
CLUSTER92(1)_SCPS599971368mesophilic anaerobic BSA digester clone BSA1B-05 AB175359.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
95.61434-temperature biodegraded Canadian oil reservoir clone PL-5B8 AY570591.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
95.81371Hudson river sediment clone Z35 AY754832.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
94.41406uranium mine sediment clone P3IB-23 AF414571.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
94.71371Sedimentibacter hydroxybenzoicus L11305.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
CLUSTER93(1)_SCPS60787921contaminated aquifer clone WCHB1-21 AF050580.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
85.5207contaminated aquifer clone WCHB1-21 AF050580.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Acetivibrio)
88.2779Paenibacillus polymyxa str. WY110 AY302439.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Paenibacillaceae)
86.9198Paenibacillus polymyxa str. WY110 AY302439.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Paenibacillaceae)
88.1779Paenibacillus polymyxa str. GBR-447 AY359620.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Paenibacillaceae)
86.9198Paenibacillus polymyxa str. GBR-447 AY359620.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Paenibacillaceae)
88.1779Paenibacillus polymyxa str. GBR-477 AY359625.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Paenibacillaceae)
86.9198Paenibacillus polymyxa str. GBR-477 AY359625.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Paenibacillaceae)
88.1779Paenibacillus polymyxa str. GBR-325 AY359618.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Paenibacillaceae)
86.9198Paenibacillus polymyxa str. GBR-325 AY359618.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Paenibacillaceae)
CLUSTER94(1)_SCPS43197.51436phylotype OTU-48 swine intestine clone p-334-a3 AF371609.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
97.51432phylotype OTU-48 swine intestine clone p-969-s962-5 AF371610.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
971440Roseburia faecalis str. M6/1 AY804149.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
971440Roseburia faecalis str. M88/1 AY804150.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
971439butyrate-producing M72/1 AY305310.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER95(1)_SCPS67296.41342phylotype OTU-82 swine intestine clone p-2540-9F5 AF371539.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus productus et al.)
95.61374human colonic clone HuCB12 AJ408993.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus productus et al.)
951372butyrate-producing SR1/1 AY305321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus productus et al.)
94.91372butyrate-producing SR1/5 AY305322.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus productus et al.)
951373Ruminococcus obeum AY169419.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus productus et al.)
CLUSTER96(1)_SCPS68494.61351feces clone 2C12 AY685919.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Ruminococcus gnavus et al.)
93.51369Clostridium saccharolyticum str. DSM 2544 Y18185.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium sphenoides et al.)
95.31249rumen clone U29-D04 AB185775.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
931376Portuguese dry smoked sausages (chouricos) type Ribatejano isolate str. Te63R AY587830.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium sphenoides et al.)
94.21267Clostridium amygdalinum str. BR-10 AY353957.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium sphenoides et al.)
CLUSTER97(1)_SCPS75294.41241phylotype OTU-237 swine intestine clone p-2876-6C5 AF371584.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
98.988phylotype OTU-237 swine intestine clone p-2876-6C5 AF371584.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
94.51226phylotype OTU-215 swine intestine clone p-389-o3 AF371583.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
96.688phylotype OTU-215 swine intestine clone p-389-o3 AF371583.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
931246rumen clone RC32 AF001695.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.91243phylotype OTU-135 swine intestine clone p-1646-c5 AF371566.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium symbiosum et al.)
98.993phylotype OTU-135 swine intestine clone p-1646-c5 AF371566.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium symbiosum et al.)
94.81029Swine manure pit complete isolate str. PPC31 AF445285.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
95.9193Swine manure pit complete isolate str. PPC31 AF445285.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER98(1)_SCPS570961253methanogenic landfill leachate bioreactor clone AC036 AY330126.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
89.7165methanogenic landfill leachate bioreactor clone AC036 AY330126.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
95.81252methanogenic landfill leachate bioreactor clone AC014 AY330123.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
88.2144methanogenic landfill leachate bioreactor clone AC014 AY330123.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
95.11271Clostridiaceae str. 80Wc AB078860.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
92.91222phylotype OTU-32 swine intestine clone p-1512-b5 AF371599.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
92.91208phylotype OTU-368 swine intestine clone p-4570-4Wb3 AF371636.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER99(1)_SCPS72494.41438anoxic bulk soil flooded rice microcosm clone BSV70 clone AJ229214.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
95.91253methanogenic landfill leachate bioreactor clone AC036 AY330126.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
89.3168methanogenic landfill leachate bioreactor clone AC036 AY330126.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
95.91252methanogenic landfill leachate bioreactor clone AC014 AY330123.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
95.487methanogenic landfill leachate bioreactor clone AC014 AY330123.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
96.51167Clostridiaceae str. 80Wc AB078860.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)
94.61256Clostridium populeti X71853.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Coprococcus)