genelib report for 4002286, SCUS

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameVerrucomicrobium TAV2
genus_speciesVerrucomicrobium
strainTAV2
source_librarysource_library_name
vector_name
source_dnasource_dna_nameVerr_0001
source_dna_number4002286
source_dna_typeWhole Genome
seq_projectproject_number4002286
project_type2006 CSP
draft_analysis_group_des
deadline30-SEP-06
seq_librarylibrary_nameSCUS
library_type18s ribosomal Eukarya
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size.7
plates_expected
depth_target
insert_userhtice
date_entered01-NOV-05
seq_lib_vectorvector_namepCR4-TOPO_eukarya
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114505
dna_received01-NOV-05
sample_description
ribosomal_profileEukaryote

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192969696N/A
Failed0000N/A

Contigs Output: 96

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
921
31
11

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(92)_SCUS9798100896gi|49066436|gb|AY635837.1| Phycomyces blakesleeanus isolate AFTOL-ID 184 18S ribosomal RNA gene, partial sequence
99.8896gi|11078036|gb|AF157151.1|AF157151 Phycomyces blakesleeanus 18S ribosomal RNA gene, partial sequence
99.8896Phycomyces blakesleeanus#1753 bp##rna
95.2898gi|11078044|gb|AF157159.1|AF157159 Spinellus fusiger 18S ribosomal RNA gene, partial sequence
95.2898Spinellus fusiger#1750 bp##rna
CLUSTER0(92)_SCUS9803100890gi|49066436|gb|AY635837.1| Phycomyces blakesleeanus isolate AFTOL-ID 184 18S ribosomal RNA gene, partial sequence
99.8890gi|11078036|gb|AF157151.1|AF157151 Phycomyces blakesleeanus 18S ribosomal RNA gene, partial sequence
99.8890Phycomyces blakesleeanus#1753 bp##rna
95.2892gi|11078044|gb|AF157159.1|AF157159 Spinellus fusiger 18S ribosomal RNA gene, partial sequence
95.2892Spinellus fusiger#1750 bp##rna
CLUSTER0(92)_SCUS987899.8896gi|49066436|gb|AY635837.1| Phycomyces blakesleeanus isolate AFTOL-ID 184 18S ribosomal RNA gene, partial sequence
99.6896gi|11078036|gb|AF157151.1|AF157151 Phycomyces blakesleeanus 18S ribosomal RNA gene, partial sequence
99.6896Phycomyces blakesleeanus#1753 bp##rna
95898gi|11078044|gb|AF157159.1|AF157159 Spinellus fusiger 18S ribosomal RNA gene, partial sequence
95898Spinellus fusiger#1750 bp##rna
CLUSTER0(92)_SCUS988899.7896gi|49066436|gb|AY635837.1| Phycomyces blakesleeanus isolate AFTOL-ID 184 18S ribosomal RNA gene, partial sequence
99.4896gi|11078036|gb|AF157151.1|AF157151 Phycomyces blakesleeanus 18S ribosomal RNA gene, partial sequence
99.4896Phycomyces blakesleeanus#1753 bp##rna
94.9898gi|11078044|gb|AF157159.1|AF157159 Spinellus fusiger 18S ribosomal RNA gene, partial sequence
94.9898Spinellus fusiger#1750 bp##rna
CLUSTER2(3)_SCUS981199.4877gi|6689054|emb|AJ236039.1|PTO236039 Paulownia tomentosa 18S rRNA gene
99.4877Paulownia tomentosa#1769 bp##rna
99.3877gi|4558890|gb|AF107579.1|AF107579 Catalpa bignonioides 18S ribosomal RNA gene, partial sequence
99.3877gi|6651252|gb|AF161011.1|AF161011 Verbascum thapsus 18S ribosomal RNA gene, partial sequence
99.3877gi|6687478|emb|AJ236034.1|EAB236034 Euthystachys abbreviata 18S rRNA gene
CLUSTER1(1)_SCUS984599.9874gi|23092303|gb|AY129551.1| Verticillium sp. EndF3 18S ribosomal RNA gene, partial sequence
99.9874gi|31559706|dbj|AB111495.1| Torrubiella confragosa genes for 18S ribosomal RNA, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2, 28S ribosomal RNA, partial and complete sequence
99.9874gi|74267366|dbj|AB233337.1| Paecilomyces farinosus genes for 18S ribosomal RNA, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2, 28S ribosomal RNA, partial and complete sequence, strain: BCMU IF07
99.8874gi|11125692|dbj|AB032475.1| Paecilomyces fumoso-roseus gene for 18S rRNA, partial sequence
99.8874gi|31559705|dbj|AB111494.1| Verticillium fungicola var. aleophilum genes for 18S ribosomal RNA, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2, 28S ribosomal RNA, partial and complete sequence