genelib report for 4002535, SCYP

Library Information (from Project Tracking System DB):

bio_class_genus_species	bio_classification_type	Single Organism
	bio_classification_name	Phytophthora capsici LT1534
	genus_species	Phytophthora capsici
	strain	LT1534
source_library	source_library_name
	vector_name
source_dna	source_dna_name	Phca_0002
	source_dna_number	4002535
	source_dna_type	Whole Genome
seq_project	project_number	4002535
	project_type	2006 CSP
	draft_analysis_group_des
	deadline	30-SEP-07
seq_library	library_name	SCYP
	library_type	18s ribosomal Eukarya
	sequencing_type	Ribosomal
	internal_customer	Ribosomal Sequencing
	re_array
	insert_size_type	small
	target_insert_size	.7
	plates_expected
	depth_target
	insert_user	htice
	date_entered	07-DEC-05
seq_lib_vector	vector_name	pCR4-TOPO_eukarya
shadow_parent	library_name
account	account_no	625909
	account_name	Seq General, Program Management
account_group	account_group	SEQUENCING DEPT ACCOUNTS
institution	code_name
sample	sample_number	114729
	dna_received
	sample_description
	ribosomal_profile	Eukaryote

Processing Summary:

Reads Input: 192

	Read Pairing	Assemble	Qual Filters	Blast Filter	Chimera Checking
Passed	192	93	92	92	N/A
Failed	0	3	1	0	N/A

Contigs Output: 92

Number of Cluster by Size (Number of Members)

Size	Number of Clusters
90	1
1	2

Cluster Representatives Blast Hits

Cluster Rep ID	Pct-Id	Align len	Hit
CLUSTER0(90)_SCYP386	100	894	gi\|53693097\|gb\|AY742748.1\| Phytophthora capsici isolate 98110 18S ribosomal RNA gene, partial sequence
	99.9	894	gi\|53693094\|gb\|AY742745.1\| Phytophthora palmivora isolate 8829 18S ribosomal RNA gene, partial sequence
	99.9	894	gi\|53693095\|gb\|AY742746.1\| Phytophthora capsici isolate 20081 18S ribosomal RNA gene, partial sequence
	99.9	894	gi\|53693111\|gb\|AY742743.1\| Phytophthora tropicalis isolate 129F-1 18S ribosomal RNA gene, partial sequence
	99.8	894	gi\|53828186\|gb\|AY744948.1\| Phytophthora palmivora isolate 88108 18S ribosomal RNA gene, partial sequence
CLUSTER0(90)_SCYP393	100	898	gi\|53693097\|gb\|AY742748.1\| Phytophthora capsici isolate 98110 18S ribosomal RNA gene, partial sequence
	99.9	898	gi\|53693094\|gb\|AY742745.1\| Phytophthora palmivora isolate 8829 18S ribosomal RNA gene, partial sequence
	99.9	898	gi\|53693095\|gb\|AY742746.1\| Phytophthora capsici isolate 20081 18S ribosomal RNA gene, partial sequence
	99.9	898	gi\|53693111\|gb\|AY742743.1\| Phytophthora tropicalis isolate 129F-1 18S ribosomal RNA gene, partial sequence
	99.8	898	gi\|53828186\|gb\|AY744948.1\| Phytophthora palmivora isolate 88108 18S ribosomal RNA gene, partial sequence
CLUSTER0(90)_SCYP420	100	899	gi\|53693097\|gb\|AY742748.1\| Phytophthora capsici isolate 98110 18S ribosomal RNA gene, partial sequence
	99.9	899	gi\|53693094\|gb\|AY742745.1\| Phytophthora palmivora isolate 8829 18S ribosomal RNA gene, partial sequence
	99.9	899	gi\|53693095\|gb\|AY742746.1\| Phytophthora capsici isolate 20081 18S ribosomal RNA gene, partial sequence
	99.9	899	gi\|53693111\|gb\|AY742743.1\| Phytophthora tropicalis isolate 129F-1 18S ribosomal RNA gene, partial sequence
	99.8	899	gi\|53828186\|gb\|AY744948.1\| Phytophthora palmivora isolate 88108 18S ribosomal RNA gene, partial sequence
CLUSTER0(90)_SCYP442	100	897	gi\|53693097\|gb\|AY742748.1\| Phytophthora capsici isolate 98110 18S ribosomal RNA gene, partial sequence
	99.9	897	gi\|53693094\|gb\|AY742745.1\| Phytophthora palmivora isolate 8829 18S ribosomal RNA gene, partial sequence
	99.9	897	gi\|53693095\|gb\|AY742746.1\| Phytophthora capsici isolate 20081 18S ribosomal RNA gene, partial sequence
	99.9	897	gi\|53693111\|gb\|AY742743.1\| Phytophthora tropicalis isolate 129F-1 18S ribosomal RNA gene, partial sequence
	99.8	897	gi\|53828186\|gb\|AY744948.1\| Phytophthora palmivora isolate 88108 18S ribosomal RNA gene, partial sequence
CLUSTER1(1)_SCYP440	93.3	899	gi\|53693097\|gb\|AY742748.1\| Phytophthora capsici isolate 98110 18S ribosomal RNA gene, partial sequence
	93.2	899	gi\|53693095\|gb\|AY742746.1\| Phytophthora capsici isolate 20081 18S ribosomal RNA gene, partial sequence
	93.2	899	gi\|53693111\|gb\|AY742743.1\| Phytophthora tropicalis isolate 129F-1 18S ribosomal RNA gene, partial sequence
	93.5	878	gi\|53828186\|gb\|AY744948.1\| Phytophthora palmivora isolate 88108 18S ribosomal RNA gene, partial sequence
	93.1	899	gi\|53693093\|gb\|AY742744.1\| Phytophthora infestans isolate TD-1 18S ribosomal RNA gene, partial sequence
CLUSTER2(1)_SCYP406	90.4	773	gi\|53693097\|gb\|AY742748.1\| Phytophthora capsici isolate 98110 18S ribosomal RNA gene, partial sequence
	90.4	773	gi\|53693111\|gb\|AY742743.1\| Phytophthora tropicalis isolate 129F-1 18S ribosomal RNA gene, partial sequence
	90.3	773	gi\|53828186\|gb\|AY744948.1\| Phytophthora palmivora isolate 88108 18S ribosomal RNA gene, partial sequence
	90.3	773	gi\|53693094\|gb\|AY742745.1\| Phytophthora palmivora isolate 8829 18S ribosomal RNA gene, partial sequence
	90.3	773	gi\|53693095\|gb\|AY742746.1\| Phytophthora capsici isolate 20081 18S ribosomal RNA gene, partial sequence