genelib report for 4002538, SCYT

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameChloronema giganteum UdG9001
genus_speciesChloronema giganteum
strainUdG9001
source_librarysource_library_name
vector_name
source_dnasource_dna_nameChgi_0001
source_dna_number4002538
source_dna_typeWhole Genome
seq_projectproject_number4002538
project_type2005 Microbe Projects
draft_analysis_group_des
deadline30-SEP-07
seq_librarylibrary_nameSCYT
library_type16s ribosomal Bacteria
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size1.5
plates_expected
depth_target
insert_userhtice
date_entered09-DEC-05
seq_lib_vectorvector_namepCR4-TOPO_eubacteria
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114735
dna_received
sample_description
ribosomal_profileEukaryote

Processing Summary:

Reads Input: 384

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed384232222N/A
Failed07310N/A

Contigs Output: 22

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
181
14

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER1(18)_SCYT42098.81464Enteric Group 137 isolate str. 2410-97 AF208013.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
98.81464Citrobacter farmeri str. CDC 2991-81 AF025371.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
98.61464Salmonella typhimurium LT2 str. LT2; SGSC 1412; ATCC 700720 LT2 AE008857.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
98.61464Salmonella typhimurium LT2 str. SGSC1412 AF233324.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
98.61464Salmonella typhimurium LT2 str. LT2; SGSC 1412; ATCC 700720 LT2 AE008893.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER1(18)_SCYT42798.81463Enteric Group 137 isolate str. 2410-97 AF208013.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
98.81463Citrobacter farmeri str. CDC 2991-81 AF025371.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
98.61463Salmonella typhimurium LT2 str. LT2; SGSC 1412; ATCC 700720 LT2 AE008857.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
98.61463Salmonella typhimurium LT2 str. SGSC1412 AF233324.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
98.61463Salmonella typhimurium LT2 str. LT2; SGSC 1412; ATCC 700720 LT2 AE008893.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER0(1)_SCYT43199.91407Rhodopseudomonas palustris X87279.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Bradyrhizobiales; Bradyrhizobiaceae)
99.91407Rhodopseudomonas palustris str. CGA009 BX572607.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Bradyrhizobiales; Bradyrhizobiaceae)
99.81407Rhodopseudomonas palustris F7-1 AB017261.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Bradyrhizobiales; Bradyrhizobiaceae)
99.71408Rhodopseudomonas palustris D25312.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Bradyrhizobiales; Bradyrhizobiaceae)
99.61407Afipia genosp. 5 str. F8014 U87771.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Bradyrhizobiales; Bradyrhizobiaceae)
CLUSTER2(1)_SCYT45190.4531termite gut homogenate clone Rs-K23 bacterium AB088933.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.6190termite gut homogenate clone Rs-K23 bacterium AB088933.1 (Bacteria; Bacteroidetes; Bacteroidales)
94.2104termite gut homogenate clone Rs-K23 bacterium AB088933.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.6513mesophilic anaerobic BSA digester clone BSA2B-13 AB175385.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.2440mesophilic anaerobic BSA digester clone BSA2B-13 AB175385.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.3235mesophilic anaerobic BSA digester clone BSA2B-13 AB175385.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.3150mesophilic anaerobic BSA digester clone BSA2B-13 AB175385.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.6513mesophilic anaerobic BSA digester clone BSA1B-15 AB175369.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.2440mesophilic anaerobic BSA digester clone BSA1B-15 AB175369.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.3235mesophilic anaerobic BSA digester clone BSA1B-15 AB175369.1 (Bacteria; Bacteroidetes; Bacteroidales)
93.3150mesophilic anaerobic BSA digester clone BSA1B-15 AB175369.1 (Bacteria; Bacteroidetes; Bacteroidales)
91.8437contaminated aquifer clone WCHB1-53 AF050539.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.2338contaminated aquifer clone WCHB1-53 AF050539.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.3217contaminated aquifer clone WCHB1-53 AF050539.1 (Bacteria; Bacteroidetes; Bacteroidales)
95.896contaminated aquifer clone WCHB1-53 AF050539.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.9406deep-sea sediment clone BD1-16 AB015525.1 (Bacteria; Bacteroidetes; Bacteroidales)
90.6320deep-sea sediment clone BD1-16 AB015525.1 (Bacteria; Bacteroidetes; Bacteroidales)
92.7218deep-sea sediment clone BD1-16 AB015525.1 (Bacteria; Bacteroidetes; Bacteroidales)
96.996deep-sea sediment clone BD1-16 AB015525.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER3(1)_SCYT41389.2520Bacillus sp. str. SFB AY669375.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Sporolactobacillaceae)
89.6521Bacillus agaradhaerens str. GSP78 AY553093.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Sporolactobacillaceae)
88.8520Bacillus sp. str. GSP75 AY553091.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Sporolactobacillaceae)
88.5520Lake Natron isolate 103NT4 X92163.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Sporolactobacillaceae)
88.5503Bacillus halodurans str. C-125 AB031211.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Sporolactobacillaceae)
CLUSTER4(1)_SCYT46599.91428Actinobacteria str. PB90-5 AJ229241.1 (Bacteria; Actinobacteria; Actinobacteridae; Cellulomonadaceae)
98.51428Actinobacteria str. VeCb6 AJ229245.1 (Bacteria; Actinobacteria; Actinobacteridae; Cellulomonadaceae)
971429Cellulomonas fermentans X83805.1 (Bacteria; Actinobacteria; Actinobacteridae; Cellulomonadaceae)
96.91429Cellulomonas fermentans str. DSM 3133 X79458.1 (Bacteria; Actinobacteria; Actinobacteridae; Cellulomonadaceae)
96.81390midgut homogenate Pachnoda ephippiata larva clone PeM29 AJ576428.1 (Bacteria; Actinobacteria; Actinobacteridae; Cellulomonadaceae)