genelib report for 4002578, SCZA

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameGardnerella vaginalis
genus_speciesGardnerella vaginalis
strain
source_librarysource_library_name
vector_name
source_dnasource_dna_nameGava_0001
source_dna_number4002578
source_dna_typeWhole Genome
seq_projectproject_number4002578
project_typeDirector's Discretion
draft_analysis_group_des
deadline30-SEP-07
seq_librarylibrary_nameSCZA
library_type16s ribosomal Bacteria
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size1.5
plates_expected
depth_target
insert_userhtice
date_entered16-DEC-05
seq_lib_vectorvector_namepCR4-TOPO_eubacteria
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114775
dna_received
sample_description
ribosomal_profileEukaryote

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192939393N/A
Failed0300N/A

Contigs Output: 93

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
921
11

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(92)_SCZA40499.21444Gardnerella vaginalis M58744.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.41448Bifidobacterium breve str. JCM 7017 AF491835.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.41445Bifidobacterium bifidum U25952.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.41445Bifidobacterium bifidum U25951.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
92.81445Bifidobacterium pseudocatenulatum str. JCM1200 D86187.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
CLUSTER0(92)_SCZA42699.21444Gardnerella vaginalis M58744.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.31456Bifidobacterium bifidum U25952.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.31456Bifidobacterium bifidum U25951.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
92.81456Bifidobacterium pseudocatenulatum str. JCM1200 D86187.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
92.61459Bifidobacterium boum str. JCM1211 D86190.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
CLUSTER0(92)_SCZA43599.11440Gardnerella vaginalis M58744.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.31444Bifidobacterium breve str. JCM 7017 AF491835.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.31444Bifidobacterium breve str. JCM 7016 AF491834.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.31441Bifidobacterium bifidum U25952.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.31441Bifidobacterium bifidum U25951.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
CLUSTER0(92)_SCZA44599.11414Gardnerella vaginalis M58744.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.31408Bifidobacterium bifidum U25952.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
93.31408Bifidobacterium bifidum U25951.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
92.81412Bifidobacterium pseudocatenulatum str. JCM1200 D86187.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
92.81410Bifidobacterium boum str. JCM1211 D86190.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
CLUSTER1(1)_SCZA40296.51447Gardnerella vaginalis M58744.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
91.31452Bifidobacterium bifidum U25952.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
91.31452Bifidobacterium bifidum U25951.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
90.71452Bifidobacterium pseudocatenulatum str. JCM1200 D86187.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)
90.21452Bifidobacterium bifidum M38018.1 (Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriaceae)