genelib report for 4002612, SFAI

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameDictyostelium purpureum QSDP1
genus_speciesDictyostelium purpureum
strainQSDP1
source_librarysource_library_name
vector_name
source_dnasource_dna_nameDipu_0001
source_dna_number4002612
source_dna_typeWhole Genome
seq_projectproject_number4002612
project_type2006 Microbe Projects
draft_analysis_group_des
deadline30-SEP-07
seq_librarylibrary_nameSFAI
library_type16s ribosomal Bacteria
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size1.5
plates_expected
depth_target
insert_userhtice
date_entered20-DEC-05
seq_lib_vectorvector_namepCR4-TOPO_eubacteria
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114809
dna_received
sample_description
ribosomal_profileEukaryote

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192928989N/A
Failed0430N/A

Contigs Output: 89

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
881
11

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(88)_SFAI38799.61450Klebsiella pneumoniae str. NLEP98-0472 AF228920.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.51463Klebsiella pneumoniae X87276.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.61450Klebsiella pneumoniae AJ233420.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.51450Klebsiella pneumoniae subsp. ozaenae str. ATCC13885 subsp. AF228919.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.41450Klebsiella subsp. pneumoniae str. ATCC13886 AF228918.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER0(88)_SFAI43499.71450Klebsiella pneumoniae str. NLEP98-0472 AF228920.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.71463Klebsiella pneumoniae X87276.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.71450Klebsiella pneumoniae AJ233420.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.61450Klebsiella pneumoniae subsp. ozaenae str. ATCC13885 subsp. AF228919.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.61450Klebsiella subsp. pneumoniae str. ATCC13886 AF228918.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER0(88)_SFAI46599.71463Klebsiella pneumoniae X87276.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.41457Klebsiella pneumoniae X93214.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.71441Klebsiella pneumoniae str. JCM1662 AB004753.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.61450Klebsiella sp. str. zmvsy U31076.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.71441Klebsiella pneumoniae str. ATCC13883T Y17656.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER0(88)_SFAI47399.71450Klebsiella subsp. pneumoniae str. ATCC13886 AF228918.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.71450Klebsiella pneumoniae subsp. ozaenae str. ATCC13885 subsp. AF228919.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.71450Klebsiella pneumoniae str. NLEP98-0472 AF228920.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.51463Klebsiella pneumoniae X87276.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
99.61450Klebsiella pneumoniae AJ233420.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER1(1)_SFAI45895.71452Klebsiella pneumoniae subsp. ozaenae str. ATCC13885 subsp. AF228919.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
95.71452Klebsiella subsp. pneumoniae str. ATCC13886 AF228918.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
95.61452Klebsiella pneumoniae str. NLEP98-0472 AF228920.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
95.61445Klebsiella pneumoniae subsp. ozaenae str. ATCC11296T subsp. Y17654.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
95.51467Klebsiella pneumoniae X87276.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)