genelib report for 4002681, SFCZ

Library Information (from Project Tracking System DB):

bio_class_genus_species	bio_classification_type	Single Organism
	bio_classification_name	Pyrobaculum islandicum DSM 4184
	genus_species	Pyrobaculum islandicum
	strain	DSM 4184
source_library	source_library_name
	vector_name
source_dna	source_dna_name	Pyis_0001
	source_dna_number	4002681
	source_dna_type	Whole Genome
seq_project	project_number	4002681
	project_type	2006 CSP
	draft_analysis_group_des
	deadline	30-SEP-06
seq_library	library_name	SFCZ
	library_type	18s ribosomal Eukarya
	sequencing_type	Ribosomal
	internal_customer	Ribosomal Sequencing
	re_array
	insert_size_type	small
	target_insert_size	.7
	plates_expected
	depth_target
	insert_user	htice
	date_entered	20-JAN-06
seq_lib_vector	vector_name	pCR4-TOPO_eukarya
shadow_parent	library_name
account	account_no	625909
	account_name	Seq General, Program Management
account_group	account_group	SEQUENCING DEPT ACCOUNTS
institution	code_name
sample	sample_number	114893
	dna_received	20-JAN-06
	sample_description
	ribosomal_profile	Prokaryote

Processing Summary:

Reads Input: 192

	Read Pairing	Assemble	Qual Filters	Blast Filter	Chimera Checking
Passed	192	96	93	93	N/A
Failed	0	0	3	0	N/A

Contigs Output: 93

Number of Cluster by Size (Number of Members)

Size	Number of Clusters
86	1
5	1
1	2

Cluster Representatives Blast Hits

Cluster Rep ID	Pct-Id	Align len	Hit
CLUSTER0(86)_SFCZ402	99.1	869	gi\|7578498\|gb\|AF132890.1\|AF132890 Kerria japonica 18S ribosomal RNA gene, partial sequence
	99.1	869	Kerria japonica#1740 bp##rna
	99	868	gi\|20514383\|gb\|AF502596.1\| Strasburgeria robusta 18S ribosomal RNA gene, partial sequence
	99	868	Strasburgeria robusta#1717 bp##rna
	98.8	868	gi\|6689360\|emb\|AJ235978.1\|STR235978 Staphylea trifolia 18S rRNA gene
CLUSTER0(86)_SFCZ415	98.9	874	gi\|7578498\|gb\|AF132890.1\|AF132890 Kerria japonica 18S ribosomal RNA gene, partial sequence
	98.9	874	Kerria japonica#1740 bp##rna
	98.7	873	gi\|20514383\|gb\|AF502596.1\| Strasburgeria robusta 18S ribosomal RNA gene, partial sequence
	98.7	873	Strasburgeria robusta#1717 bp##rna
	98.6	873	gi\|6689360\|emb\|AJ235978.1\|STR235978 Staphylea trifolia 18S rRNA gene
CLUSTER0(86)_SFCZ434	98.9	878	gi\|7578498\|gb\|AF132890.1\|AF132890 Kerria japonica 18S ribosomal RNA gene, partial sequence
	98.9	878	Kerria japonica#1740 bp##rna
	98.7	877	gi\|20514383\|gb\|AF502596.1\| Strasburgeria robusta 18S ribosomal RNA gene, partial sequence
	98.7	877	Strasburgeria robusta#1717 bp##rna
	98.6	877	gi\|6689360\|emb\|AJ235978.1\|STR235978 Staphylea trifolia 18S rRNA gene
CLUSTER0(86)_SFCZ441	99	878	gi\|7578498\|gb\|AF132890.1\|AF132890 Kerria japonica 18S ribosomal RNA gene, partial sequence
	99	878	Kerria japonica#1740 bp##rna
	98.9	877	gi\|20514383\|gb\|AF502596.1\| Strasburgeria robusta 18S ribosomal RNA gene, partial sequence
	98.9	877	Strasburgeria robusta#1717 bp##rna
	98.7	877	gi\|6689360\|emb\|AJ235978.1\|STR235978 Staphylea trifolia 18S rRNA gene
CLUSTER2(5)_SFCZ422	99.8	543	Pyrobaculum organotrophum str. JCM 9190 AB063647.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
	100	101	Pyrobaculum organotrophum str. JCM 9190 AB063647.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
	99.6	543	Pyrobaculum islandicum L07511.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
	99	101	Pyrobaculum islandicum L07511.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
	99.1	543	Pyrobaculum sp. str. WIJ3 AJ277125.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
	97	101	Pyrobaculum sp. str. WIJ3 AJ277125.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
	99.1	544	Pyrobaculum arsenaticum str. PZ6 AJ277124.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
	96	101	Pyrobaculum arsenaticum str. PZ6 AJ277124.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
	98.9	543	Pyrobaculum neutrophilum X81886.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
	99	101	Pyrobaculum neutrophilum X81886.1 (Archaea; Thermoprotei; Thermoproteales; Thermoproteaceae)
CLUSTER1(1)_SFCZ403	93.9	652	gi\|7578498\|gb\|AF132890.1\|AF132890 Kerria japonica 18S ribosomal RNA gene, partial sequence
	93.9	652	Kerria japonica#1740 bp##rna
	93.3	683	gi\|18448\|emb\|X15590.1\|FA18S Strawberry (octoploid) DNA for 18S ribosomal rRNA
	93	687	gi\|20514383\|gb\|AF502596.1\| Strasburgeria robusta 18S ribosomal RNA gene, partial sequence
	93.3	683	Fragaria ananassa#1804 bp##rna
CLUSTER3(1)_SFCZ423	99.5	881	gi\|337376\|gb\|M10098.1\|HUMRGE Human 18S rRNA gene, complete
	99.5	881	gi\|36162\|emb\|X03205.1\|HSRRN18S Human 18S ribosomal RNA
	99.5	881	gi\|555853\|gb\|U13369.1\|HSU13369 Human ribosomal DNA complete repeating unit
	99.5	881	Homo sapiens#1869 bp##rna
	99.5	881	Homo sapiens#1969 bp##rna