genelib report for 4002719, SFFX

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameSerratia proteamaculans 568
genus_speciesSerratia proteamaculans
strain568
source_librarysource_library_name
vector_name
source_dnasource_dna_nameSepr_0001
source_dna_number4002719
source_dna_typeWhole Genome
seq_projectproject_number4002719
project_type2006 Microbe Projects
draft_analysis_group_des
deadline30-SEP-06
seq_librarylibrary_nameSFFX
library_type18s ribosomal Eukarya
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size.7
plates_expected
depth_target
insert_userhtice
date_entered25-JAN-06
seq_lib_vectorvector_namepCR4-TOPO_eukarya
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114931
dna_received25-JAN-06
sample_description
ribosomal_profileProkaryote

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192959595N/A
Failed0100N/A

Contigs Output: 95

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
791
131
13

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(79)_SFFX39999.5877gi|32812798|emb|AJ495829.1|TAL495829 Taphrina alni partial 18S rRNA gene, strain HA1364
99.5877gi|32812799|emb|AJ495830.1|TRO495830 Taphrina robinsoniana partial 18S rRNA gene, strain HA850
99.5877gi|32812800|emb|AJ495831.1|TAL495831 Taphrina alni partial 18S rRNA gene, strain HA872
99.5877gi|32812801|emb|AJ495832.1|TAL495832 Taphrina alni partial 18S rRNA gene, strain HA859
99.5877gi|32812803|emb|AJ495834.1|TAL495834 Taphrina alni partial 18S rRNA gene, strain HA857
CLUSTER0(79)_SFFX40299.7876gi|32812798|emb|AJ495829.1|TAL495829 Taphrina alni partial 18S rRNA gene, strain HA1364
99.7876gi|32812799|emb|AJ495830.1|TRO495830 Taphrina robinsoniana partial 18S rRNA gene, strain HA850
99.7876gi|32812800|emb|AJ495831.1|TAL495831 Taphrina alni partial 18S rRNA gene, strain HA872
99.7876gi|32812801|emb|AJ495832.1|TAL495832 Taphrina alni partial 18S rRNA gene, strain HA859
99.7876gi|32812803|emb|AJ495834.1|TAL495834 Taphrina alni partial 18S rRNA gene, strain HA857
CLUSTER0(79)_SFFX43399.7875gi|32812798|emb|AJ495829.1|TAL495829 Taphrina alni partial 18S rRNA gene, strain HA1364
99.7875gi|32812799|emb|AJ495830.1|TRO495830 Taphrina robinsoniana partial 18S rRNA gene, strain HA850
99.7875gi|32812800|emb|AJ495831.1|TAL495831 Taphrina alni partial 18S rRNA gene, strain HA872
99.7875gi|32812801|emb|AJ495832.1|TAL495832 Taphrina alni partial 18S rRNA gene, strain HA859
99.7875gi|32812803|emb|AJ495834.1|TAL495834 Taphrina alni partial 18S rRNA gene, strain HA857
CLUSTER0(79)_SFFX46999.7873gi|32812798|emb|AJ495829.1|TAL495829 Taphrina alni partial 18S rRNA gene, strain HA1364
99.7873gi|32812799|emb|AJ495830.1|TRO495830 Taphrina robinsoniana partial 18S rRNA gene, strain HA850
99.7873gi|32812800|emb|AJ495831.1|TAL495831 Taphrina alni partial 18S rRNA gene, strain HA872
99.7873gi|32812801|emb|AJ495832.1|TAL495832 Taphrina alni partial 18S rRNA gene, strain HA859
99.7873gi|32812803|emb|AJ495834.1|TAL495834 Taphrina alni partial 18S rRNA gene, strain HA857
CLUSTER1(13)_SFFX41799.9873gi|28412368|gb|AY190268.1| Dothideomycete sp. G6-R56 18S ribosomal RNA gene, partial sequence
99.9873gi|28412369|gb|AY190269.1| Dothideomycete sp. G6-S57 18S ribosomal RNA gene, partial sequence
99.9873gi|28412372|gb|AY190272.1| Dothideomycete sp. G9-S50 18S ribosomal RNA gene, partial sequence
99.9873gi|28412373|gb|AY190273.1| Dothideomycete sp. G9-S53 18S ribosomal RNA gene, partial sequence
99.9873gi|30526078|gb|AY275186.1| Dothideomycete sp. P 18S ribosomal RNA gene, partial sequence
CLUSTER1(13)_SFFX45299.8874gi|28412368|gb|AY190268.1| Dothideomycete sp. G6-R56 18S ribosomal RNA gene, partial sequence
99.8874gi|28412369|gb|AY190269.1| Dothideomycete sp. G6-S57 18S ribosomal RNA gene, partial sequence
99.8874gi|28412372|gb|AY190272.1| Dothideomycete sp. G9-S50 18S ribosomal RNA gene, partial sequence
99.8874gi|28412373|gb|AY190273.1| Dothideomycete sp. G9-S53 18S ribosomal RNA gene, partial sequence
99.8874gi|30526078|gb|AY275186.1| Dothideomycete sp. P 18S ribosomal RNA gene, partial sequence
CLUSTER2(1)_SFFX43099.7864gi|33334384|gb|AF548070.1| Cladosporium cladosporioides strain ALI 50 18S ribosomal RNA gene, partial sequence
99.7864gi|33334385|gb|AF548071.1| Cladosporium cladosporioides strain UPSC 1657 18S ribosomal RNA gene, partial sequence
99.7864gi|16233815|gb|AY016351.1| Raciborskiomyces longisetosum 18S ribosomal RNA gene, partial sequence
99.7864Raciborskiomyces longisetosum#1743 bp##rna
99.6856gi|18025874|gb|AY046698.1| Uncultured eukaryote isolate A1_E031 18S ribosomal RNA gene, partial sequence
CLUSTER3(1)_SFFX44994.8785gi|24742973|emb|AJ515163.1|UAS515163 Uncultured soil ascomycete partial 18S rRNA gene, clone r20-21
94.8785gi|24742977|emb|AJ515164.1|UAS515164 Uncultured soil ascomycete partial 18S rRNA gene, clone r20-71
93.9785gi|5457398|emb|Y18700.1|HWY18700 Hortaea werneckii 18S rRNA gene, strain DE 2/21b dH10921
93.9785Hortaea werneckii#1785 bp##rna
93.8785Labyrinthomyces varius#1734 bp##rna
CLUSTER4(1)_SFFX42097.9846gi|23092303|gb|AY129551.1| Verticillium sp. EndF3 18S ribosomal RNA gene, partial sequence
97.9846gi|29170579|dbj|AB106650.1| Engyodontium album gene for 18S ribosomal RNA, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2, 28S ribosomal RNA, partial and complete sequence
97.9846gi|31559706|dbj|AB111495.1| Torrubiella confragosa genes for 18S ribosomal RNA, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2, 28S ribosomal RNA, partial and complete sequence
97.9846gi|74267366|dbj|AB233337.1| Paecilomyces farinosus genes for 18S ribosomal RNA, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2, 28S ribosomal RNA, partial and complete sequence, strain: BCMU IF07
97.8846gi|11125692|dbj|AB032475.1| Paecilomyces fumoso-roseus gene for 18S rRNA, partial sequence