genelib report for 4002720, SFFZ

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_namePseudomonas putida W619
genus_speciesPseudomonas putida
strainW619
source_librarysource_library_name
vector_name
source_dnasource_dna_namePspu_0002
source_dna_number4002720
source_dna_typeWhole Genome
seq_projectproject_number4002720
project_type2006 Microbe Projects
draft_analysis_group_des
deadline30-SEP-06
seq_librarylibrary_nameSFFZ
library_type16s ribosomal Bacteria
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size1.5
plates_expected
depth_target
insert_userhtice
date_entered25-JAN-06
seq_lib_vectorvector_namepCR4-TOPO_eubacteria
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114932
dna_received25-JAN-06
sample_description
ribosomal_profileProkaryote

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192949494N/A
Failed0200N/A

Contigs Output: 94

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
911
13

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(91)_SFFZ43399.51455Pseudomonas putida str. ATCC 12633 AF094736.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51459Pseudomonas sp. str. ML2 AF378011.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51460Pseudomonas sp. str. WSCIII AY344806.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51459Pseudomonas putida str. KT2440 AE016774.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51459Pseudomonas sp. str. pseudomonas sp TS1138 AY536741.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
CLUSTER0(91)_SFFZ43799.51455Pseudomonas putida str. ATCC 12633 AF094736.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51459Pseudomonas sp. str. ML2 AF378011.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51460Pseudomonas sp. str. WSCIII AY344806.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51459Pseudomonas putida str. KT2440 AE016774.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51459Pseudomonas sp. str. pseudomonas sp TS1138 AY536741.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
CLUSTER0(91)_SFFZ44199.51457Pseudomonas putida str. ATCC 12633 AF094736.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51459Pseudomonas sp. str. ML2 AF378011.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51460Pseudomonas sp. str. WSCIII AY344806.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51459Pseudomonas putida str. KT2440 AE016774.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.51459Pseudomonas sp. str. pseudomonas sp TS1138 AY536741.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
CLUSTER0(91)_SFFZ45099.41469Pseudomonas sp. str. ML2 AF378011.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.41469Pseudomonas putida str. KT2440 AE016774.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.41469Pseudomonas sp. str. pseudomonas sp TS1138 AY536741.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.41468Pseudomonas sp. str. 12B_3 AY689079.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
99.31469Pseudomonas putida str. DSM 291T () Z76667.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
CLUSTER1(1)_SFFZ46695.31032Pseudomonas putida str. Biotype ICMP 2758; ATCC 12633; NCIB 9494 AJ308313.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
95.21032Pseudomonas putida str. ATCC 12633 AF094736.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
95.41010Pseudomonas sp. str. ML2 AF378011.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
95.41010Pseudomonas sp. str. Fa27 AY131221.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
95.41010Pseudomonas sp. str. Fa24 AY131219.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
CLUSTER2(1)_SFFZ45496.81294Pseudomonas putida str. Biotype ICMP 2758; ATCC 12633; NCIB 9494 AJ308313.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
96.71294Pseudomonas putida str. ATCC 12633 AF094736.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
96.71295Pseudomonas sp. str. WSCIII AY344806.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
96.61294Pseudomonas putida str. DSM 291T () Z76667.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
96.51295Pseudomonas sp. str. NPO-JL-67 AY745835.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
CLUSTER3(1)_SFFZ47191.61316Pseudomonas putida str. Biotype ICMP 2758; ATCC 12633; NCIB 9494 AJ308313.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
91.61316Pseudomonas putida str. ATCC 12633 AF094736.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
96.2976Pseudomonas sp. str. ML2 AF378011.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
96.2976Pseudomonas sp. str. Fa27 AY131221.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
96.2976Pseudomonas sp. str. Fa24 AY131219.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)