genelib report for 4002732, SFHB

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameBurkholderia phytofirmans PsJN
genus_speciesBurkholderia phytofirmans
strainPsJN
source_librarysource_library_name
vector_name
source_dnasource_dna_nameBuph_0002
source_dna_number4002732
source_dna_typeWhole Genome
seq_projectproject_number4002732
project_type2006 Microbe Projects
draft_analysis_group_des
deadline30-SEP-06
seq_librarylibrary_nameSFHB
library_type16s ribosomal Bacteria
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size1.5
plates_expected
depth_target
insert_userhtice
date_entered02-FEB-06
seq_lib_vectorvector_namepCR4-TOPO_eubacteria
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number114949
dna_received02-FEB-06
sample_description
ribosomal_profileProkaryote

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192949494N/A
Failed0200N/A

Contigs Output: 94

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
921
12

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(92)_SFHB401991450PCB-polluted soil clone WD285 AJ292644.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
991453Sargasso Sea AACY01074305.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.81450Burkholderia sp. U37342.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.81440hepatopancreatic symbiont clone 11 AY447042.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.81444Burkholderia sp. str. 418 AY520839.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
CLUSTER0(92)_SFHB43399.21450PCB-polluted soil clone WD285 AJ292644.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
99.21453Burkholderia sp. U37344.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.91453Sargasso Sea AACY01074305.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.81450Burkholderia sp. U37342.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.71447Burkholderia xenovorans str. LB400 U86373.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
CLUSTER0(92)_SFHB44599.11450PCB-polluted soil clone WD285 AJ292644.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
991453Sargasso Sea AACY01074305.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.91450Burkholderia sp. U37342.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.91440hepatopancreatic symbiont clone 11 AY447042.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.91444Burkholderia sp. str. 418 AY520839.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
CLUSTER0(92)_SFHB469991450PCB-polluted soil clone WD285 AJ292644.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
991453Sargasso Sea AACY01074305.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.81450Burkholderia sp. U37342.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.71450Burkholderia sp. str. LMG 21262 AF452132.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
98.81440hepatopancreatic symbiont clone 11 AY447042.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
CLUSTER1(1)_SFHB418951315Burkholderia sp. Clong1 Clong 1 AY178061.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
96.41213PCB-polluted soil clone WD285 AJ292644.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
96.31213Tetraponera binghami symbiont AF459796.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
96.31213Sargasso Sea AACY01074305.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
96.21213Burkholderia sp. str. 418 AY520839.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
CLUSTER2(1)_SFHB40895.71379Burkholderia sp. U37344.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
95.41377PCB-polluted soil clone WD285 AJ292644.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
95.61373Burkholderia sp. UCT 21 AY178057.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
95.71355Burkholderia sp. Clong1 Clong 1 AY178061.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)
95.41379Sargasso Sea AACY01074305.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae)