gene_oid gene_length percent_identity query_start query_end subj_start subj_end evalue bit_score cog_id cog_name cog_length 650064839 415 17.58 57 386 61 378 5.0e-05 42.5 COG2814 Predicted arabinose efflux permease, MFS family 394 650064840 197 25.14 1 179 5 182 2.0e-12 65.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650064842 453 31.24 3 425 1 415 4.0e-65 242 COG0446 NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase 415 650064843 211 22.28 4 194 3 199 5.0e-11 61.5 COG0702 Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains 275 650064844 159 61.01 1 159 3 161 1.0e-66 245 COG0386 Glutathione peroxidase, house-cleaning role in reducing lipid peroxides 162 650064848 559 37.37 1 462 28 505 4.0e-113 402 COG0513 Superfamily II DNA and RNA helicase 513 650064850 556 36.85 4 519 3 517 3.0e-118 419 COG0661 Predicted unusual protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family 517 650064851 105 35.58 1 104 4 107 5.0e-10 56.1 COG3937 Polyhydroxyalkanoate synthesis regulator phasin 108 650064856 486 56.18 4 476 16 492 0.0e+00 671 COG0753 Catalase 496 650064860 336 40.07 31 321 3 278 3.0e-70 259 COG1686 D-alanyl-D-alanine carboxypeptidase 389 650064861 231 45.45 4 231 3 227 4.0e-62 231 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650064862 367 27.84 20 367 1 336 9.0e-37 148 COG0642 Signal transduction histidine kinase 336 650064863 370 46.7 178 359 1 179 4.0e-40 159 COG2199 GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants 181 650064864 316 47.65 1 314 1 311 2.0e-83 302 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650064868 517 21.85 34 402 2 379 2.0e-36 146 COG0665 Glycine/D-amino acid oxidase (deaminating) 387 650064871 297 35.35 2 295 1 295 7.0e-58 217 COG1597 Diacylglycerol kinase family enzyme 301 650064872 624 40.85 35 619 1 567 0.0e+00 520 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650064873 575 38.18 1 571 4 567 5.0e-126 445 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650064874 160 34.51 33 144 19 126 2.0e-12 65 COG1846 DNA-binding transcriptional regulator, MarR family 126 650064875 351 35.92 10 315 2 298 9.0e-72 264 COG1162 Putative ribosome biogenesis GTPase RsgA 301 650064876 762 24.03 182 761 7 636 5.0e-66 246 COG1199 Rad3-related DNA helicase 654 650064877 264 34.62 57 258 49 255 3.0e-36 145 COG0726 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family 267 650064878 347 31.46 1 346 2 340 4.0e-56 212 COG0673 Predicted dehydrogenase 342 650064880 540 52.24 29 516 13 493 0.0e+00 640 COG0753 Catalase 496 650064881 296 33.44 1 296 1 295 1.0e-48 186 COG0583 DNA-binding transcriptional regulator, LysR family 297 650064882 123 40.71 9 121 9 121 5.0e-17 80.2 COG1380 Putative effector of murein hydrolase LrgA, UPF0299 family 128 650064883 229 49.56 1 228 1 228 8.0e-60 223 COG1346 Putative effector of murein hydrolase 230 650064884 619 28.62 15 611 22 627 2.0e-79 290 COG1368 Phosphoglycerol transferase MdoB or a related enzyme of AlkP superfamily 650 650064886 409 38.35 1 396 40 429 9.0e-101 360 COG1253 Hemolysin or related protein, contains CBS domains 429 650064887 529 17.45 207 516 15 374 6.0e-12 66 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 393 650064888 640 36.64 162 636 3 473 4.0e-101 362 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase 475 650064891 462 67.53 1 461 1 462 0.0e+00 757 COG0114 Fumarate hydratase class II 462 650064892 342 28.71 47 340 54 345 1.0e-28 120 COG4427 Uncharacterized protein 350 650064893 598 37.44 5 594 6 573 0.0e+00 522 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 573 650064894 591 37.8 17 589 4 558 0.0e+00 498 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 559 650064895 338 44.31 1 334 4 342 3.0e-72 265 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 346 650064896 467 51.74 1 455 2 451 0.0e+00 492 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 457 650064897 192 30.57 2 191 1 187 1.0e-35 142 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 189 650064898 198 23.32 1 190 2 192 1.0e-11 63.1 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650064899 591 27.41 252 582 26 336 4.0e-38 153 COG0642 Signal transduction histidine kinase 336 650064900 238 38.72 4 236 2 229 1.0e-57 215 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650064901 409 37.21 4 386 10 390 2.0e-65 243 COG2311 Uncharacterized membrane protein YeiB 394 650064902 101 40 1 94 2 95 5.0e-13 66.1 COG2329 Heme-degrading monooxygenase HmoA and related ABM domain proteins 105 650064905 113 26.61 5 110 18 125 5.0e-09 53.1 COG5649 Uncharacterized protein 132 650064906 132 29.32 5 132 2 132 1.0e-16 79.2 COG2764 Uncharacterized conserved protein PhnB, glyoxalase superfamily 136 650064907 420 50 6 415 3 411 1.0e-119 423 COG4941 Predicted RNA polymerase sigma factor, contains C-terminal TPR domain 415 650064908 143 41.18 1 117 1 114 3.0e-24 104 COG3795 Uncharacterized conserved protein 123 650064910 382 18.73 69 381 1 282 2.0e-08 53.6 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650064912 304 55.33 3 300 1 299 3.0e-112 397 COG0031 Cysteine synthase 300 650064913 283 26.01 30 252 17 217 8.0e-25 107 COG0095 Lipoate-protein ligase A 248 650064915 542 32.29 1 535 21 606 3.0e-97 349 COG3211 Secreted phosphatase, PhoX family 616 650064916 73 36.23 4 72 2 70 6.0e-12 62.3 COG1826 Sec-independent protein translocase protein TatA 94 650064917 230 33.47 1 230 17 255 3.0e-41 161 COG0805 Sec-independent protein secretion pathway component TatC 255 650064918 525 34.48 40 519 8 473 8.0e-77 281 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase 475 650064919 348 40.12 53 345 118 440 2.0e-68 252 COG3325 Chitinase, GH18 family 441 650064923 462 23.88 53 383 1 331 5.0e-30 125 COG3669 Alpha-L-fucosidase 430 650064924 535 19.04 1 451 1 412 3.0e-16 80.5 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650064925 302 31.76 12 301 8 281 1.0e-46 180 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650064926 323 48.04 18 323 4 309 2.0e-95 342 COG4209 ABC-type polysaccharide transport system, permease component 309 650064928 345 32.54 24 344 61 437 2.0e-61 229 COG3325 Chitinase, GH18 family 441 650064929 70 50.72 1 69 3 70 2.0e-13 67.1 COG2155 Uncharacterized membrane protein YuzA, DUF378 family 79 650064930 347 32.2 30 346 12 329 3.0e-51 195 COG2855 Uncharacterized membrane protein YadS 334 650064931 299 26.87 2 295 20 282 2.0e-22 99 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650064932 302 23.2 12 302 18 312 1.0e-20 93.6 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650064933 159 61.39 1 158 3 160 8.0e-66 242 COG0386 Glutathione peroxidase, house-cleaning role in reducing lipid peroxides 162 650064934 653 42.01 13 650 9 585 0.0e+00 581 COG3533 Uncharacterized conserved protein, DUF1680 family 589 650064935 274 30.89 152 274 2 124 1.0e-18 87.2 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650064936 133 45.45 1 131 3 125 3.0e-35 140 COG3865 Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase 151 650064938 246 29.71 8 244 3 229 5.0e-28 118 COG1011 FMN phosphatase YigB, HAD superfamily 229 650064939 294 20.95 51 254 47 233 3.0e-13 69.1 COG2226 Ubiquinone/menaquinone biosynthesis C-methylase UbiE 238 650064940 344 33.69 1 343 1 373 4.0e-69 255 COG3835 Sugar diacid utilization regulator 376 650064941 382 58.87 7 378 3 374 0.0e+00 479 COG1929 Glycerate kinase 378 650064942 431 26.83 11 431 8 442 2.0e-43 170 COG2610 H+/gluconate symporter or related permease 442 650064943 470 41.16 2 441 47 508 9.0e-99 354 COG4147 Na+(or H+)/acetate symporter ActP 529 650064947 99 29.41 1 99 1 102 9.0e-17 78.4 COG3162 Uncharacterized membrane protein, DUF485 family 102 650064948 265 36.15 4 263 2 242 4.0e-41 161 COG3279 DNA-binding response regulator, LytR/AlgR family 244 650064949 584 35.99 1 575 1 550 1.0e-116 413 COG3275 Sensor histidine kinase, LytS/YehU family 557 650064950 151 33.8 1 141 2 143 2.0e-21 94.9 COG3610 Uncharacterized membrane protein YjjB, DUF3815 family 156 650064951 327 36.89 1 321 1 314 2.0e-61 229 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650064952 433 45.52 1 430 1 429 2.0e-125 443 COG0172 Seryl-tRNA synthetase 429 650064953 279 28.4 30 274 8 261 1.0e-39 156 COG2141 Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) 336 650064954 250 41.5 2 247 1 250 3.0e-53 201 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650064955 143 31.75 2 126 1 126 1.0e-12 65.7 COG1846 DNA-binding transcriptional regulator, MarR family 126 650064958 747 51.84 14 744 1 709 0.0e+00 827 COG2217 Cation transport ATPase 713 650064960 66 44.12 1 66 1 68 4.0e-09 53.1 COG2608 Copper chaperone CopZ 71 650064961 107 41.57 19 106 1 89 9.0e-18 81.8 COG1937 DNA-binding transcriptional regulator, FrmR family 89 650064962 713 54.69 21 713 6 682 0.0e+00 900 COG3661 Alpha-glucuronidase 684 650064963 338 39.4 34 333 51 339 7.0e-75 274 COG3693 Endo-1,4-beta-xylanase, GH35 family 345 650064964 311 30.64 20 310 8 281 3.0e-45 175 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650064965 346 54.76 53 346 18 309 1.0e-104 373 COG4209 ABC-type polysaccharide transport system, permease component 309 650064966 562 21.54 3 387 2 346 8.0e-13 69.3 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650064967 593 24.24 79 573 3 447 2.0e-50 193 COG2972 Sensor histidine kinase YesM 456 650064968 531 29.43 1 520 1 474 5.0e-67 249 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650064969 467 46.64 6 466 4 463 0.0e+00 557 COG1904 Glucuronate isomerase 463 650064970 225 31.42 1 225 6 230 2.0e-36 145 COG1802 DNA-binding transcriptional regulator, GntR family 230 650064971 365 50.97 1 351 1 357 0.0e+00 470 COG1312 D-mannonate dehydratase 362 650064972 313 31.52 36 307 2 250 6.0e-42 165 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650064973 438 46.49 4 433 3 441 0.0e+00 489 COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase 442 650064974 327 30.94 1 301 4 290 8.0e-30 124 COG2971 BadF-type ATPase, related to human N-acetylglucosamine kinase 301 650064976 358 31.72 39 345 1 284 1.0e-56 213 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 284 650064977 296 33.44 1 296 1 289 3.0e-36 145 COG0583 DNA-binding transcriptional regulator, LysR family 297 650064978 272 25.66 53 268 50 268 3.0e-17 82.7 COG3393 Predicted acetyltransferase, GNAT family 268 650064979 178 25.95 20 174 1 142 7.0e-14 70.4 COG5628 Predicted acetyltransferase 143 650064984 257 44.18 6 254 4 251 2.0e-60 226 COG1349 DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family 253 650064985 283 25.36 147 281 3 139 1.0e-04 41 COG2510 Uncharacterized membrane protein 140 650064986 176 25.5 1 169 3 199 3.0e-22 98.4 COG1335 Nicotinamidase-related amidase 205 650064987 159 28.1 23 140 3 123 2.0e-12 65.7 COG1846 DNA-binding transcriptional regulator, MarR family 126 650064988 297 32.42 10 296 8 281 1.0e-44 173 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650064989 311 42.19 11 311 9 309 4.0e-81 294 COG4209 ABC-type polysaccharide transport system, permease component 309 650064990 529 24.1 4 385 1 349 2.0e-14 74.7 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650064992 364 30.9 30 364 1 332 9.0e-47 181 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650064993 730 34.83 1 727 38 758 0.0e+00 606 COG3537 Putative alpha-1,2-mannosidase 768 650065001 187 31.64 10 184 6 182 2.0e-27 115 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065006 340 28.14 8 171 9 175 7.0e-22 98.2 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065007 327 52.55 1 306 5 314 2.0e-98 352 COG0180 Tryptophanyl-tRNA synthetase 314 650065008 349 34.57 5 323 2 304 2.0e-51 196 COG0492 Thioredoxin reductase 305 650065009 334 52.34 47 302 2 257 3.0e-93 335 COG1120 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component 258 650065010 315 24.62 1 315 1 315 4.0e-34 138 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650065014 336 40.61 8 336 2 330 3.0e-56 212 COG0609 ABC-type Fe3+-siderophore transport system, permease component 334 650065015 522 43.65 8 508 6 508 0.0e+00 496 COG1292 Choline-glycine betaine transporter 537 650065016 325 33.09 5 139 1 124 8.0e-07 48.3 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650065017 172 47.37 1 145 1 151 1.0e-45 175 COG0242 Peptide deformylase 168 650065018 80 29.49 1 77 2 71 3.0e-05 40.2 COG3655 DNA-binding transcriptional regulator, XRE family 73 650065019 214 30.66 1 212 1 199 2.0e-31 128 COG3764 Sortase (surface protein transpeptidase) 210 650065021 317 27.81 2 302 1 292 3.0e-05 43.3 COG0697 Permease of the drug/metabolite transporter (DMT) superfamily 292 650065023 229 34.53 3 221 2 223 2.0e-49 189 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650065024 334 23.48 8 327 8 332 2.0e-25 109 COG0642 Signal transduction histidine kinase 336 650065025 253 47.51 3 222 1 221 6.0e-75 273 COG1136 ABC-type lipoprotein export system, ATPase component 226 650065027 161 19.4 27 152 23 150 3.0e-03 35 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650065030 255 25.19 3 249 6 261 5.0e-27 114 COG0561 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases 264 650065031 232 19.68 33 218 25 212 9.0e-16 77.2 COG0664 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases 214 650065032 312 34.16 32 293 23 303 1.0e-41 164 COG2367 Beta-lactamase class A 329 650065034 353 27.83 25 338 13 336 7.0e-42 164 COG2141 Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) 336 650065035 169 31.9 5 167 1 149 2.0e-22 98.6 COG3832 Uncharacterized conserved protein YndB, AHSA1/START domain 149 650065036 125 41.76 22 110 19 109 3.0e-08 51 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650065040 404 42.6 19 401 10 394 1.0e-68 253 COG2814 Predicted arabinose efflux permease, MFS family 394 650065041 163 46.67 12 161 1 149 7.0e-33 133 COG0782 Transcription elongation factor, GreA/GreB family 151 650065042 389 31.98 2 381 17 455 1.0e-76 280 COG0246 Mannitol-1-phosphate/altronate dehydrogenases 473 650065043 146 49.64 4 142 2 140 8.0e-39 152 COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain 142 650065044 689 24.29 6 496 2 443 8.0e-43 169 COG3711 Transcriptional antiterminator 491 650065045 477 67.95 10 476 3 467 0.0e+00 662 COG2213 Phosphotransferase system, mannitol-specific IIBC component 472 650065049 295 24.32 6 289 8 254 5.0e-21 95.3 COG0584 Glycerophosphoryl diester phosphodiesterase 257 650065051 425 34.55 245 424 63 253 8.0e-29 121 COG0726 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family 267 650065053 237 23.14 1 237 5 255 8.0e-04 37.7 COG0730 Uncharacterized membrane protein YfcA 258 650065054 113 78.57 2 113 1 112 4.0e-46 176 COG2824 Uncharacterized Zn-ribbon-containing protein 112 650065055 338 21.75 1 311 1 314 1.0e-26 114 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650065056 166 46.67 1 164 1 163 1.0e-45 175 COG4297 Uncharacterized protein YjlB 163 650065058 304 41.84 11 301 10 302 1.0e-58 220 COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 303 650065062 264 24.54 14 264 18 280 4.0e-26 111 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650065063 363 25.57 4 350 2 323 4.0e-28 119 COG3274 Surface polysaccharide O-acyltransferase, integral membrane enzyme 332 650065064 386 31.56 85 378 117 436 6.0e-49 188 COG3325 Chitinase, GH18 family 441 650065066 492 42.34 5 492 1 488 0.0e+00 576 COG0397 Uncharacterized conserved protein YdiU, UPF0061 family 488 650065067 246 43.35 22 245 44 276 5.0e-50 191 COG4760 Uncharacterized membrane protein, YccA/Bax inhibitor family 276 650065071 481 34.02 1 445 26 513 8.0e-110 391 COG0513 Superfamily II DNA and RNA helicase 513 650065072 501 35.44 5 475 1 429 4.0e-107 381 COG0579 L-2-hydroxyglutarate oxidase LhgO 429 650065074 362 28.46 95 361 81 344 3.0e-33 136 COG4194 Uncharacterized membrane protein 350 650065077 262 31.73 3 242 13 245 1.0e-31 130 COG2746 Aminoglycoside N3'-acetyltransferase 251 650065078 433 22.3 1 425 5 424 3.0e-38 153 COG1215 Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase 439 650065080 296 26.39 115 258 3 143 6.0e-08 51.7 COG2199 GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants 181 650065090 146 29.6 23 144 23 146 2.0e-11 61.6 COG0071 Molecular chaperone IbpA, HSP20 family 146 650065097 214 33.33 15 213 11 183 8.0e-24 103 COG0693 Putative intracellular protease/amidase 188 650065101 142 31.25 14 140 1 126 1.0e-08 52.2 COG1846 DNA-binding transcriptional regulator, MarR family 126 650065102 436 26.48 14 429 12 392 7.0e-29 122 COG1228 Imidazolonepropionase or related amidohydrolase 406 650065105 517 26.84 4 233 1 221 2.0e-26 114 COG1961 Site-specific DNA recombinase related to the DNA invertase Pin 222 650065113 131 20.91 25 130 4 110 2.0e-05 41.9 COG2337 mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module 112 650065114 245 24.49 20 208 17 210 5.0e-11 61.5 COG3279 DNA-binding response regulator, LytR/AlgR family 244 650065115 181 19.14 7 166 4 158 1.0e-09 56 COG0817 Holliday junction resolvasome RuvABC endonuclease subunit 160 650065123 312 25.57 13 307 1 295 1.0e-23 104 COG4974 Site-specific recombinase XerD 300 650065127 485 30 56 401 3 322 2.0e-51 197 COG0270 Site-specific DNA-cytosine methylase 328 650065132 146 37.5 1 125 1 127 2.0e-24 105 COG3727 G:T-mismatch repair DNA endonuclease, very short patch repair protein 150 650065134 127 34.23 16 125 3 111 4.0e-19 87.3 COG2337 mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module 112 650065141 192 27.78 3 164 14 172 9.0e-13 67 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650065145 148 26.81 1 136 1 134 6.0e-09 53.3 COG3153 Predicted N-acetyltransferase YhbS 171 650065147 456 39.61 152 456 58 344 5.0e-57 215 COG0265 Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain 347 650065149 267 34.66 1 233 2 252 3.0e-38 152 COG1235 Phosphoribosyl 1,2-cyclic phosphodiesterase 269 650065150 249 20.65 1 226 1 241 2.0e-12 66.5 COG4853 Two-component signal transduction system YycFG, regulatory protein YycI 264 650065151 425 22.09 2 415 3 422 1.0e-28 120 COG4863 Two-component signal transduction system YycFG, regulatory protein YycH 439 650065152 609 51.33 151 600 1 447 8.0e-127 447 COG5002 Signal transduction histidine kinase 459 650065153 243 47.64 5 236 3 226 5.0e-65 241 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650065155 524 31.29 258 524 3 261 1.0e-34 141 COG0739 Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain 277 650065157 225 45.41 3 224 2 229 1.0e-57 215 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650065158 460 33.87 152 458 28 328 1.0e-49 191 COG0642 Signal transduction histidine kinase 336 650065160 232 46.19 6 227 2 224 6.0e-72 263 COG1136 ABC-type lipoprotein export system, ATPase component 226 650065161 429 58.39 1 421 1 423 0.0e+00 634 COG0104 Adenylosuccinate synthase 430 650065162 440 52 8 431 14 435 0.0e+00 501 COG0305 Replicative DNA helicase 435 650065163 147 55.78 1 147 1 147 8.0e-39 152 COG0359 Ribosomal protein L9 148 650065164 665 46.21 1 655 1 647 0.0e+00 667 COG3887 c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains 655 650065165 305 19.66 15 303 20 312 7.0e-11 61.9 COG4241 Uncharacterized conserved protein YybS, DUF2232 family 314 650065167 147 24.58 10 126 6 117 2.0e-06 44.8 COG0517 CBS domain 117 650065168 328 25.16 1 311 1 295 3.0e-42 165 COG1316 Anionic cell wall polymer biosynthesis enzyme, LytR-Cps2A-Psr (LCP) family 307 650065169 330 43.05 1 294 2 279 8.0e-72 264 COG1686 D-alanyl-D-alanine carboxypeptidase 389 650065170 321 55.13 2 313 1 266 3.0e-108 385 COG4608 ABC-type oligopeptide transport system, ATPase component 309 650065171 325 59.56 5 319 1 316 2.0e-130 458 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 316 650065172 307 47.59 19 307 7 288 1.0e-72 266 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650065173 320 43.89 1 319 1 315 5.0e-87 314 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650065177 90 62.67 11 85 1 75 1.0e-20 91.4 COG0238 Ribosomal protein S18 75 650065178 165 44.77 1 165 2 167 5.0e-32 130 COG0629 Single-stranded DNA-binding protein 167 650065199 70 31.88 1 69 2 70 3.0e-09 53.7 COG3655 DNA-binding transcriptional regulator, XRE family 73 650065200 303 27.42 16 300 6 300 2.0e-31 130 COG4974 Site-specific recombinase XerD 300 650065202 83 41.18 1 67 2 69 1.0e-08 51.5 COG1598 Predicted nuclease of the RNAse H fold, HicB family 73 650065205 348 25.81 32 336 12 299 2.0e-43 169 COG4974 Site-specific recombinase XerD 300 650065207 73 63.16 4 60 3 59 2.0e-18 84.2 COG4481 Uncharacterized protein 60 650065208 296 30.68 40 286 37 283 2.0e-25 109 COG0668 Small-conductance mechanosensitive channel 316 650065213 382 37.05 3 380 22 402 1.0e-85 310 COG0520 Selenocysteine lyase/Cysteine desulfurase 405 650065214 279 36.9 24 274 4 240 2.0e-35 143 COG1475 Chromosome segregation protein Spo0J, contains ParB-like nuclease domain 240 650065215 253 47.43 1 251 1 252 4.0e-63 234 COG1192 Cellulose biosynthesis protein BcsQ 259 650065216 272 45.88 18 210 1 191 8.0e-33 134 COG1475 Chromosome segregation protein Spo0J, contains ParB-like nuclease domain 240 650065217 240 43.96 14 220 11 213 5.0e-60 224 COG0357 16S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B) 215 650065218 628 63.43 4 620 1 617 0.0e+00 988 COG0445 tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA 621 650065219 458 52.29 1 458 2 454 0.0e+00 530 COG0486 tRNA U34 5-carboxymethylaminomethyl modifying GTPase MnmE/TrmE 454 650065220 260 33.59 3 258 1 208 2.0e-47 182 COG1847 Predicted RNA-binding protein Jag, conains KH and R3H domains 208 650065222 128 37.39 15 128 3 116 8.0e-18 82.6 COG0594 RNase P protein component 117 650065224 299 60.67 1 299 1 300 9.0e-122 430 COG1023 6-phosphogluconate dehydrogenase (decarboxylating) 300 650065225 225 26.11 1 225 5 225 2.0e-28 119 COG1802 DNA-binding transcriptional regulator, GntR family 230 650065226 453 48.09 11 453 1 442 9.0e-91 327 COG2610 H+/gluconate symporter or related permease 442 650065227 515 36.74 2 505 1 501 2.0e-121 429 COG1070 Sugar (pentulose or hexulose) kinase 502 650065229 448 48.73 9 441 1 407 0.0e+00 483 COG0593 Chromosomal replication initiation ATPase DnaA 408 650065230 380 34.56 1 378 1 364 4.0e-69 255 COG0592 DNA polymerase III sliding clamp (beta) subunit, PCNA homolog 364 650065231 71 42.25 1 71 2 72 2.0e-15 74.1 COG2501 Ribosome-associated protein YbcJ, S4-like RNA binding protein 73 650065232 370 46.34 1 368 1 361 5.0e-111 394 COG1195 Recombinational DNA repair ATPase RecF 363 650065234 634 65.99 1 634 1 635 0.0e+00 1014 COG0187 DNA gyrase/topoisomerase IV, subunit B 635 650065235 832 59.41 1 808 1 804 0.0e+00 1052 COG0188 DNA gyrase/topoisomerase IV, subunit A 804 650065241 217 27.01 31 204 1 163 4.0e-07 48.4 COG2801 Transposase InsO and inactivated derivatives 232 650065244 555 33.93 5 554 6 545 5.0e-102 365 COG1982 Arginine/lysine/ornithine decarboxylase 557 650065245 214 43.69 5 210 2 205 2.0e-57 215 COG0125 Thymidylate kinase 208 650065246 109 69.72 1 109 1 109 6.0e-42 162 COG3870 Uncharacterized protein YaaQ 109 650065247 147 27.2 21 145 25 149 7.0e-20 90 COG1728 Uncharacterized protein YaaR, TM1646/DUF327 family 151 650065249 266 54.34 1 264 1 264 3.0e-77 281 COG1774 Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development) 265 650065250 123 50 1 123 1 113 3.0e-24 103 COG4467 Regulator of replication initiation timing 114 650065251 255 44.8 1 249 2 245 3.0e-72 265 COG4123 tRNA1(Val) A37 N6-methylase TrmN6 248 650065252 297 50 18 294 5 272 7.0e-90 324 COG0313 16S rRNA C1402 (ribose-2'-O) methylase RsmI 275 650065255 429 39.66 6 411 1 404 3.0e-96 345 COG1078 HD superfamily phosphohydrolase 421 650065256 254 58.2 1 254 2 256 1.0e-93 336 COG0084 Tat protein secretion system quality control protein TatD (DNase activity) 256 650065258 205 46.77 17 135 2 125 4.0e-27 115 COG1658 5S rRNA maturation endonuclease (Ribonuclease M5), contains TOPRIM domain 127 650065259 294 51.67 21 289 1 255 4.0e-84 304 COG0030 16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity) 259 650065261 91 66.67 4 75 5 76 2.0e-24 103 COG4466 Uncharacterized protein Veg 80 650065263 284 45.45 1 283 2 284 1.0e-85 309 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 289 650065264 275 31.87 81 260 1 179 1.0e-34 140 COG0503 Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein 179 650065265 94 73.91 1 92 1 92 2.0e-35 140 COG2088 DNA-binding protein SpoVG, cell septation regulator 95 650065266 462 55.12 1 455 1 459 0.0e+00 626 COG1207 Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase 460 650065267 317 61.34 5 315 2 314 4.0e-125 441 COG0462 Phosphoribosylpyrophosphate synthetase 314 650065269 187 53.23 1 185 2 187 1.0e-69 255 COG0193 Peptidyl-tRNA hydrolase 190 650065271 1175 45.8 23 1158 6 1132 0.0e+00 1274 COG1197 Transcription-repair coupling factor (superfamily II helicase) 1139 650065272 361 21.24 8 313 1 295 8.0e-07 48.2 COG0760 Parvulin-like peptidyl-prolyl isomerase 320 650065273 180 45.45 1 76 1 77 1.0e-11 62.7 COG2002 Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module 89 650065274 560 25.81 8 528 6 479 3.0e-24 107 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 480 650065275 504 47.87 1 493 1 484 0.0e+00 514 COG3956 Uncharacterized conserved protein YabN, contains tetrapyrrole methylase and MazG-like pyrophosphatase domain 488 650065277 92 46.15 1 91 9 99 5.0e-21 92.7 COG1188 Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain 100 650065280 116 19.39 13 106 11 108 8.0e-06 42.6 COG2919 Cell division protein FtsB 117 650065281 163 45 1 160 1 129 3.0e-35 141 COG1098 Predicted RNA-binding protein, contains ribosomal protein S1 (RPS1) domain 129 650065282 836 21.34 419 813 1 367 5.0e-34 140 COG2208 Serine phosphatase RsbU, regulator of sigma subunit 367 650065285 476 34.25 5 294 2 287 1.0e-45 178 COG0037 tRNA(Ile)-lysidine synthase TilS/MesJ 298 650065287 179 65.34 1 176 3 178 6.0e-69 253 COG0634 Hypoxanthine-guanine phosphoribosyltransferase 178 650065288 689 57.4 10 607 2 589 0.0e+00 727 COG0465 ATP-dependent Zn proteases 596 650065289 312 53.92 11 312 18 323 2.0e-114 405 COG0379 Quinolinate synthase 324 650065290 538 46 19 528 8 513 0.0e+00 560 COG0029 Aspartate oxidase 518 650065291 291 56.73 10 284 6 279 2.0e-98 352 COG0157 Nicotinate-nucleotide pyrophosphorylase 280 650065292 254 47.06 1 254 1 251 1.0e-70 259 COG1521 Pantothenate kinase type III 251 650065293 294 46.45 6 285 5 283 5.0e-84 304 COG1281 Redox-regulated molecular chaperone, HSP33 family 286 650065294 311 18.42 46 306 51 303 4.0e-09 55.5 COG0760 Parvulin-like peptidyl-prolyl isomerase 320 650065295 311 57.57 4 305 1 300 4.0e-112 397 COG0031 Cysteine synthase 300 650065297 193 67.38 1 186 3 189 3.0e-85 307 COG0512 Anthranilate/para-aminobenzoate synthase component II 191 650065298 295 38.64 1 291 1 280 2.0e-51 196 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 284 650065299 286 46.24 18 279 2 267 6.0e-78 284 COG0294 Dihydropteroate synthase 274 650065300 120 45 1 120 2 121 4.0e-30 123 COG1539 Dihydroneopterin aldolase 121 650065301 182 48.73 12 169 4 157 2.0e-45 175 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 160 650065303 343 47.4 3 326 1 323 4.0e-90 324 COG0042 tRNA-dihydrouridine synthase 323 650065304 158 48 8 157 1 149 7.0e-35 140 COG0782 Transcription elongation factor, GreA/GreB family 151 650065305 503 61.95 5 503 1 502 0.0e+00 749 COG1190 Lysyl-tRNA synthetase (class II) 502 650065307 485 31.19 258 475 1 170 7.0e-40 158 COG0516 IMP dehydrogenase/GMP reductase 170 650065308 472 34.09 68 465 25 389 4.0e-76 279 COG1686 D-alanyl-D-alanine carboxypeptidase 389 650065309 293 73.04 1 293 4 296 0.0e+00 497 COG0214 Pyridoxal biosynthesis lyase PdxS 296 650065310 195 57.81 1 188 1 192 2.0e-72 265 COG0311 Glutamine amidotransferase PdxT (pyridoxal biosynthesis) 194 650065311 427 62.79 1 427 1 429 0.0e+00 595 COG0172 Seryl-tRNA synthetase 429 650065317 163 58.22 15 159 7 152 3.0e-50 191 COG0590 tRNA(Arg) A34 adenosine deaminase TadA 152 650065318 233 40.74 1 228 3 245 3.0e-58 218 COG1187 16S rRNA U516 pseudouridylate synthase RsuA and related 23S rRNA U2605, pseudouridylate synthases 248 650065319 273 36.72 1 256 1 243 3.0e-53 202 COG1360 Flagellar motor protein MotB 244 650065320 266 44.19 1 258 1 258 6.0e-66 244 COG1291 Flagellar motor component MotA 266 650065322 103 35.79 4 97 7 101 8.0e-18 81.9 COG2154 Pterin-4a-carbinolamine dehydratase 101 650065323 118 25.62 1 117 14 127 4.0e-07 46.9 COG2010 Cytochrome c, mono- and diheme variants 150 650065330 748 36.08 21 737 4 708 0.0e+00 618 COG2217 Cation transport ATPase 713 650065331 127 38 27 126 2 101 1.0e-11 61.7 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650065334 686 41.97 4 633 3 631 0.0e+00 559 COG0744 Membrane carboxypeptidase (penicillin-binding protein) 661 650065335 289 38.16 1 289 1 303 3.0e-61 228 COG0010 Arginase family enzyme 305 650065337 690 23.64 4 362 2 362 2.0e-39 157 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650065339 285 28.52 1 281 1 269 3.0e-36 146 COG0388 Predicted amidohydrolase 274 650065340 223 15.71 17 207 10 163 5.0e-06 44.6 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650065342 141 28.47 1 140 3 143 4.0e-14 70.8 COG4506 Uncharacterized beta-barrel protein YwiB, DUF1934 family 143 650065343 559 43.15 3 559 1 577 0.0e+00 570 COG0018 Arginyl-tRNA synthetase 577 650065345 188 35.93 12 175 9 175 5.0e-09 54.2 COG3343 DNA-directed RNA polymerase, delta subunit 175 650065346 533 67.8 2 532 1 530 0.0e+00 931 COG0504 CTP synthase (UTP-ammonia lyase) 533 650065348 284 55.9 1 284 1 286 2.0e-106 379 COG0191 Fructose/tagatose bisphosphate aldolase 286 650065349 419 54.27 1 418 1 421 0.0e+00 558 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 421 650065350 445 63.86 2 410 3 417 0.0e+00 651 COG1158 Transcription termination factor Rho 422 650065351 425 22.32 184 403 43 245 5.0e-09 56.1 COG1180 Pyruvate-formate lyase-activating enzyme 260 650065352 65 48.53 1 64 1 68 8.0e-19 85.3 COG0254 Ribosomal protein L31 75 650065355 573 38.76 1 494 1 485 4.0e-124 438 COG2812 DNA polymerase III, gamma/tau subunits 515 650065356 103 49.51 1 103 4 105 4.0e-23 99.5 COG0718 Conserved DNA-binding protein YbaB (function unknown) 105 650065357 199 58.08 1 198 1 198 8.0e-85 306 COG0353 Recombinational DNA repair protein RecR 198 650065370 374 53.42 1 365 1 338 7.0e-124 437 COG3839 ABC-type sugar transport system, ATPase component 338 650065372 312 56.91 3 306 1 304 6.0e-103 367 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 308 650065373 377 37.79 6 301 11 286 2.0e-64 239 COG0682 Prolipoprotein diacylglyceryltransferase 287 650065374 216 33.94 1 214 3 220 1.0e-41 163 COG0546 Phosphoglycolate phosphatase, HAD superfamily 220 650065375 168 32.89 14 156 22 173 6.0e-18 83.8 COG0110 Acetyltransferase (isoleucine patch superfamily) 190 650065376 408 18.51 8 354 12 345 3.0e-09 56.3 COG1835 Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains 386 650065377 397 35.93 7 363 3 356 3.0e-70 259 COG3705 ATP phosphoribosyltransferase regulatory subunit HisZ 390 650065378 215 43.38 5 212 3 219 2.0e-56 212 COG0040 ATP phosphoribosyltransferase 290 650065379 201 58.46 7 201 2 195 8.0e-79 286 COG0131 Imidazoleglycerol phosphate dehydratase HisB 195 650065380 203 58.5 1 199 2 200 2.0e-79 288 COG0118 Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH 204 650065381 243 55.51 4 239 2 235 2.0e-77 282 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 241 650065382 252 67.32 1 252 1 254 1.0e-111 396 COG0107 Imidazole glycerol phosphate synthase subunit HisF 256 650065383 234 52.73 8 116 1 110 2.0e-42 166 COG0139 Phosphoribosyl-AMP cyclohydrolase 111 650065383 234 57.61 141 232 1 92 2.0e-29 122 COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 92 650065384 279 23.41 1 251 1 212 6.0e-23 101 COG1387 Histidinol phosphatase or related hydrolase of the PHP family 237 650065385 316 49.84 1 311 1 313 2.0e-100 359 COG0462 Phosphoribosylpyrophosphate synthetase 314 650065386 578 20.59 25 223 37 238 1.0e-05 45.4 COG5010 Flp pilus assembly protein TadD, contains TPR repeats 257 650065387 317 52.46 1 304 3 301 5.0e-92 331 COG0492 Thioredoxin reductase 305 650065388 162 30.94 24 162 1 139 2.0e-14 71.5 COG5577 Spore coat protein CotF 145 650065389 150 23.08 1 121 1 124 1.0e-05 42.9 COG1246 N-acetylglutamate synthase or related acetyltransferase, GNAT family 153 650065390 272 28.57 4 86 1 84 4.0e-10 58.9 COG1396 Transcriptional regulator, contains XRE-family HTH domain 120 650065391 259 34.47 1 254 1 262 4.0e-38 151 COG3231 Aminoglycoside phosphotransferase 266 650065392 164 25.49 6 152 12 158 6.0e-11 60.4 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650065393 192 20.44 1 179 2 178 6.0e-12 64.2 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650065395 473 52.86 93 471 30 411 0.0e+00 475 COG0281 Malic enzyme 432 650065396 508 55.49 1 507 1 502 0.0e+00 530 COG3333 TctA family transporter 504 650065398 335 38.04 10 335 2 319 2.0e-67 249 COG3181 Tripartite-type tricarboxylate transporter, receptor component TctC 319 650065399 536 41.1 1 526 8 533 0.0e+00 471 COG3290 Sensor histidine kinase regulating citrate/malate metabolism 537 650065400 231 43.11 2 226 1 220 9.0e-61 226 COG4565 Response regulator of citrate/malate metabolism 224 650065402 368 21.54 13 202 2 173 5.0e-08 52.2 COG4767 Glycopeptide antibiotics resistance protein 199 650065405 153 30.16 1 125 6 121 7.0e-12 63.5 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650065409 269 39.54 5 265 7 265 3.0e-40 158 COG2035 Uncharacterized membrane protein 276 650065410 189 22.62 3 170 9 174 9.0e-09 53.5 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650065419 122 33.9 1 118 2 118 4.0e-19 86.8 COG1725 DNA-binding transcriptional regulator YhcF, GntR family 125 650065420 403 27.7 19 371 11 365 4.0e-44 172 COG4585 Signal transduction histidine kinase 365 650065421 248 18.03 18 245 51 282 1.0e-06 46.8 COG0842 ABC-type multidrug transport system, permease component 286 650065422 307 33.22 8 300 3 291 6.0e-57 214 COG1131 ABC-type multidrug transport system, ATPase component 293 650065423 316 40.58 6 315 8 307 6.0e-56 211 COG1940 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 314 650065424 302 54.04 16 300 2 286 1.0e-115 409 COG1660 RNase adaptor protein for sRNA GlmZ degradation, contains a P-loop ATPase domain 286 650065425 326 45.4 6 311 5 318 2.0e-78 285 COG0391 Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family 323 650065426 309 53.57 1 308 1 305 3.0e-94 338 COG1481 DNA-binding transcriptional regulator WhiA, involved in cell division 308 650065427 89 44.32 1 88 1 88 5.0e-24 102 COG1925 Phosphotransferase system, HPr and related phosphotransfer proteins 88 650065428 226 45.37 3 222 2 226 3.0e-54 205 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650065429 358 35.53 54 354 38 332 2.0e-44 173 COG0642 Signal transduction histidine kinase 336 650065430 242 67.36 4 242 3 240 8.0e-110 389 COG1126 ABC-type polar amino acid transport system, ATPase component 240 650065431 253 35.86 18 253 11 242 3.0e-35 141 COG2968 Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain 243 650065432 323 48.86 1 323 3 352 7.0e-111 393 COG3842 ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components 352 650065433 282 45.29 1 274 6 281 3.0e-66 245 COG1176 ABC-type spermidine/putrescine transport system, permease component I 287 650065434 230 47.12 1 207 5 212 1.0e-56 212 COG1177 ABC-type spermidine/putrescine transport system, permease component II 267 650065436 350 40.33 1 350 2 363 2.0e-75 276 COG0687 Spermidine/putrescine-binding periplasmic protein 363 650065438 198 71.35 1 192 1 192 2.0e-83 301 COG0740 ATP-dependent protease ClpP, protease subunit 200 650065440 347 26.9 11 344 3 321 6.0e-54 205 COG2390 DNA-binding transcriptional regulator LsrR, DeoR family 321 650065441 334 67.07 1 332 1 333 0.0e+00 488 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 335 650065442 393 59.05 1 393 2 393 0.0e+00 531 COG0126 3-phosphoglycerate kinase 395 650065443 250 55.16 1 250 1 248 3.0e-83 301 COG0149 Triosephosphate isomerase 251 650065444 514 59.88 2 510 1 507 0.0e+00 731 COG0696 Phosphoglycerate mutase (BPG-independent, AlkP superfamily) 509 650065445 429 70.66 1 426 1 423 0.0e+00 684 COG0148 Enolase 423 650065449 374 40.11 10 364 2 341 4.0e-89 321 COG1902 2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family 363 650065450 103 32.04 1 103 13 98 5.0e-10 56.4 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650065451 310 45.02 18 302 15 302 3.0e-74 272 COG4189 Predicted transcriptional regulator 308 650065457 739 28.78 2 660 1 652 6.0e-112 398 COG1201 Lhr-like helicase 814 650065459 339 36.06 4 328 1 328 1.0e-76 279 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650065460 329 42.35 20 325 2 306 4.0e-79 288 COG4209 ABC-type polysaccharide transport system, permease component 309 650065461 294 28.92 13 293 8 281 3.0e-46 179 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065462 548 19.08 63 399 27 349 3.0e-13 70.4 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065463 448 23.88 36 442 36 425 5.0e-55 208 COG5520 O-Glycosyl hydrolase 433 650065469 546 40.89 1 543 4 558 0.0e+00 546 COG0143 Methionyl-tRNA synthetase 558 650065470 557 43.66 10 529 1 505 2.0e-111 397 COG0366 Glycosidase 505 650065471 266 21.15 3 261 31 279 2.0e-18 86.3 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650065474 254 37.8 1 253 1 253 7.0e-59 220 COG1349 DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family 253 650065476 539 22.16 5 539 5 539 2.0e-50 193 COG1178 ABC-type Fe3+ transport system, permease component 540 650065478 364 31.75 3 357 5 359 4.0e-84 305 COG0075 Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG 383 650065479 272 23.23 3 256 1 217 2.0e-19 90.2 COG0637 Beta-phosphoglucomutase or related phosphatase, HAD superfamily 221 650065481 482 31.8 21 340 50 365 6.0e-47 182 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650065482 315 16.62 2 315 1 299 3.0e-19 89.4 COG1073 Fermentation-respiration switch protein FrsA, has esterase activity, DUF1100 family 299 650065487 205 36.06 4 202 3 207 1.0e-42 166 COG4832 Uncharacterized protein 207 650065488 262 24.23 3 261 67 310 1.0e-20 93.9 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650065489 214 22.28 13 205 6 193 4.0e-12 65.1 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650065490 192 36.02 1 182 14 198 2.0e-39 155 COG1611 Predicted Rossmann fold nucleotide-binding protein 205 650065491 105 28.43 1 102 5 91 4.0e-07 46.5 COG1694 NTP pyrophosphatase, house-cleaning of non-canonical NTPs 102 650065493 241 42.08 3 241 1 232 4.0e-49 188 COG2025 Electron transfer flavoprotein, alpha subunit 313 650065494 255 45 1 255 1 260 8.0e-63 233 COG2086 Electron transfer flavoprotein, alpha and beta subunits 260 650065495 196 27.13 1 185 6 193 9.0e-12 63.5 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650065498 396 45.72 1 392 1 392 2.0e-87 316 COG0183 Acetyl-CoA acetyltransferase 392 650065499 559 41.36 24 556 12 529 0.0e+00 481 COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II 534 650065501 149 29.63 16 148 2 136 1.0e-18 85.9 COG2050 Acyl-coenzyme A thioesterase PaaI, contains HGG motif 141 650065502 76 44 1 75 1 72 6.0e-06 42.5 COG1314 Preprotein translocase subunit SecG 86 650065503 891 46.98 1 711 4 706 0.0e+00 744 COG0557 Exoribonuclease R 706 650065504 159 51.95 3 156 1 153 3.0e-52 197 COG0691 tmRNA-binding protein 153 650065506 268 24 2 243 56 283 6.0e-19 88 COG4974 Site-specific recombinase XerD 300 650065512 592 21.53 18 571 16 620 1.0e-44 174 COG0210 Superfamily I DNA or RNA helicase 655 650065518 378 29.41 137 315 2 187 5.0e-23 102 COG2856 Zn-dependent peptidase ImmA, M78 family 213 650065526 301 36.96 1 293 1 292 1.0e-66 246 COG1131 ABC-type multidrug transport system, ATPase component 293 650065527 247 20.08 2 245 39 283 3.0e-04 39.1 COG0842 ABC-type multidrug transport system, permease component 286 650065528 390 24.04 19 379 14 364 1.0e-40 160 COG4585 Signal transduction histidine kinase 365 650065529 201 36.19 2 201 1 210 5.0e-45 174 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650065532 343 24.14 1 87 2 88 8.0e-06 44.9 COG4842 Uncharacterized conserved protein YukE 97 650065540 333 48.8 1 330 2 328 6.0e-101 360 COG1995 4-hydroxy-L-threonine phosphate dehydrogenase PdxA 332 650065541 431 28.14 1 426 1 413 3.0e-65 242 COG3395 Uncharacterized conserved protein YgbK, DUF1537 family 413 650065544 417 18.18 104 399 53 316 1.0e-18 88 COG0668 Small-conductance mechanosensitive channel 316 650065545 673 49.85 124 465 2 338 7.0e-99 355 COG1299 Phosphotransferase system, fructose-specific IIC component 343 650065547 161 25.62 1 157 14 173 1.0e-19 89.8 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065550 66 65.67 1 66 1 67 6.0e-21 92.5 COG1278 Cold shock protein, CspA family 67 650065553 148 33.6 22 145 22 144 2.0e-16 78.5 COG0071 Molecular chaperone IbpA, HSP20 family 146 650065554 233 32 1 222 1 225 6.0e-19 88 COG1842 Phage shock protein A 225 650065556 266 21.97 9 266 11 269 2.0e-25 109 COG1512 Uncharacterized membrane protein YgcG, contains a TPM-fold domain 271 650065557 339 36.49 1 339 4 345 8.0e-101 360 COG4260 Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain 345 650065560 370 36.96 1 361 1 334 3.0e-54 206 COG1744 Basic membrane lipoprotein Med, periplasmic binding protein (PBP1-ABC) superfamily 345 650065561 510 60.64 1 501 1 501 0.0e+00 689 COG3845 ABC-type uncharacterized transport system, ATPase component 501 650065562 351 43.86 7 345 18 354 3.0e-73 268 COG4603 ABC-type uncharacterized transport system, permease component 356 650065563 317 46.73 12 316 14 304 2.0e-63 236 COG1079 ABC-type uncharacterized transport system, permease component 304 650065564 2086 35.81 1134 1639 16 503 4.0e-84 307 COG0737 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family 517 650065568 289 39.17 166 285 7 126 4.0e-20 92.2 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650065569 439 33.81 2 437 3 464 4.0e-68 252 COG3119 Arylsulfatase A or related enzyme 475 650065572 1651 25.91 533 1199 35 640 7.0e-113 403 COG1523 Pullulanase/glycogen debranching enzyme 697 650065574 284 29.61 5 284 15 317 1.0e-35 143 COG0226 ABC-type phosphate transport system, periplasmic component 318 650065575 320 43 30 318 10 308 7.0e-65 240 COG0573 ABC-type phosphate transport system, permease component 310 650065576 302 41.28 21 299 11 291 7.0e-62 230 COG0581 ABC-type phosphate transport system, permease component 292 650065577 258 24.55 1 201 1 205 3.0e-09 55.7 COG1387 Histidinol phosphatase or related hydrolase of the PHP family 237 650065578 269 24.22 25 267 6 247 5.0e-07 48.4 COG0619 Energy-coupling factor transporter transmembrane protein EcfT 252 650065579 714 38.43 11 248 1 235 3.0e-54 207 COG1122 Energy-coupling factor transporter ATP-binding protein EcfA2 235 650065581 280 28.73 1 268 6 276 2.0e-33 136 COG1737 DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains 281 650065583 562 14.5 144 550 32 399 5.0e-07 49.9 COG2304 Secreted protein containing bacterial Ig-like domain and vWFA domain 399 650065584 379 27.86 1 377 3 385 1.0e-54 207 COG3853 Uncharacterized conserved protein YaaN involved in tellurite resistance 386 650065585 207 21.14 1 175 5 172 2.0e-07 49.6 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650065586 316 24.22 27 276 35 283 2.0e-26 113 COG2334 Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist 331 650065591 116 41.9 1 105 3 107 3.0e-32 130 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650065593 341 24.83 47 341 1 297 2.0e-48 186 COG1533 DNA repair photolyase 297 650065594 336 38.02 2 333 1 329 9.0e-82 297 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650065595 776 39.11 10 762 6 753 0.0e+00 668 COG1554 Trehalose and maltose hydrolase (possible phosphorylase) 772 650065596 431 25.8 10 431 1 431 9.0e-42 164 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065597 309 37.63 12 304 3 295 1.0e-61 230 COG1175 ABC-type sugar transport system, permease component 295 650065598 279 41.16 4 275 3 279 2.0e-57 216 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065602 217 40.19 4 212 1 202 2.0e-45 175 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650065603 415 22.38 13 404 14 420 9.0e-29 121 COG1215 Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase 439 650065604 450 45.58 16 450 9 439 4.0e-99 355 COG0733 Na+-dependent transporter, SNF family 439 650065605 75 47.95 1 73 2 74 6.0e-14 68.8 COG4224 Uncharacterized protein YnzC, UPF0291/DUF896 family 77 650065606 177 30.29 4 167 1 175 2.0e-23 102 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065608 431 25.48 1 410 5 408 2.0e-39 157 COG1215 Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase 439 650065610 291 23.57 110 249 3 139 7.0e-07 48.2 COG2199 GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants 181 650065611 299 27.33 1 168 15 182 2.0e-18 86.7 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065612 148 33.57 8 141 33 172 9.0e-22 96.4 COG2128 Alkylhydroperoxidase family enzyme, contains CxxC motif 177 650065614 177 31.1 1 162 15 177 3.0e-26 111 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065617 249 28.64 26 231 12 214 2.0e-32 132 COG0664 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases 214 650065618 355 35.74 12 344 6 333 5.0e-81 294 COG1477 Thiamine biosynthesis lipoprotein ApbE 337 650065619 126 31.75 1 125 8 131 3.0e-18 83.8 COG5341 Uncharacterized protein 132 650065620 181 38.85 11 165 7 161 2.0e-20 92.2 COG4769 Uncharacterized membrane protein 181 650065621 290 49.12 16 239 10 235 6.0e-62 231 COG1122 Energy-coupling factor transporter ATP-binding protein EcfA2 235 650065622 287 41.74 1 242 2 235 4.0e-58 218 COG1122 Energy-coupling factor transporter ATP-binding protein EcfA2 235 650065623 263 35.91 5 263 1 248 1.0e-29 123 COG0619 Energy-coupling factor transporter transmembrane protein EcfT 252 650065626 334 31.85 1 333 1 318 1.0e-55 210 COG0142 Geranylgeranyl pyrophosphate synthase 322 650065628 624 37.5 1 412 3 405 3.0e-97 349 COG1252 NADH dehydrogenase, FAD-containing subunit 405 650065629 302 26.23 181 302 27 136 1.0e-06 47.4 COG4939 Major membrane immunogen, membrane-anchored lipoprotein 147 650065630 310 36.74 6 309 4 306 1.0e-61 230 COG0167 Dihydroorotate dehydrogenase 310 650065631 233 23.32 4 227 12 252 1.0e-25 110 COG0543 NAD(P)H-flavin reductase 252 650065632 178 38.62 1 175 1 188 9.0e-41 159 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 189 650065633 109 45 4 102 2 101 4.0e-17 79.9 COG1695 DNA-binding transcriptional regulator, PadR family 138 650065634 440 26.03 78 426 11 374 6.0e-30 125 COG0772 Bacterial cell division protein FtsW, lipid II flippase 381 650065635 436 23.35 75 422 11 374 3.0e-25 110 COG0772 Bacterial cell division protein FtsW, lipid II flippase 381 650065636 214 37.72 1 212 1 227 1.0e-53 202 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650065637 305 36.93 29 300 3 281 2.0e-50 193 COG1408 Predicted phosphohydrolase, MPP superfamily 284 650065638 344 55.99 2 310 1 263 1.0e-106 379 COG4608 ABC-type oligopeptide transport system, ATPase component 309 650065639 340 59.75 11 326 1 315 0.0e+00 469 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 316 650065640 307 50.32 1 304 1 313 3.0e-91 328 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650065641 536 33.84 42 534 34 552 1.0e-92 334 COG0747 ABC-type transport system, periplasmic component 556 650065642 319 33.94 4 319 3 330 6.0e-67 247 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650065643 402 18.4 1 402 14 431 8.0e-23 101 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065644 291 36.86 1 291 3 294 6.0e-52 197 COG1175 ABC-type sugar transport system, permease component 295 650065645 278 37.01 2 278 7 281 4.0e-47 181 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065647 476 24.64 12 298 26 362 6.0e-31 128 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650065653 559 53.49 1 558 3 560 0.0e+00 689 COG2060 K+-transporting ATPase, A chain 560 650065654 677 67.85 5 676 4 678 0.0e+00 1021 COG2216 High-affinity K+ transport system, ATPase chain B 681 650065655 209 56.52 27 207 8 190 8.0e-65 240 COG2156 K+-transporting ATPase, c chain 190 650065656 211 58.03 3 195 10 201 2.0e-63 235 COG0572 Uridine kinase 218 650065658 331 44.41 1 314 1 315 2.0e-85 309 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650065663 213 27.75 44 207 7 179 3.0e-24 105 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065669 845 24.08 354 843 2 427 1.0e-43 172 COG3664 Beta-xylosidase 428 650065670 444 20.11 52 388 39 397 1.0e-12 67.9 COG2211 Na+/melibiose symporter or related transporter 467 650065673 517 23.04 35 494 47 451 1.0e-42 168 COG2972 Sensor histidine kinase YesM 456 650065675 441 24.94 1 438 1 429 1.0e-34 141 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065676 291 34.25 1 291 2 292 7.0e-56 210 COG1175 ABC-type sugar transport system, permease component 295 650065677 289 38.66 24 288 13 281 2.0e-54 206 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065678 355 54.44 6 185 7 186 2.0e-61 229 COG2169 Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains 187 650065680 276 25.98 142 268 1 127 1.0e-18 86.8 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650065681 257 23.44 4 251 1 270 3.0e-20 92.2 COG1082 Sugar phosphate isomerase/epimerase 274 650065682 339 35.17 1 339 1 340 6.0e-64 237 COG0673 Predicted dehydrogenase 342 650065685 438 21.41 1 426 1 422 9.0e-33 135 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065686 281 42.05 1 281 1 281 2.0e-62 232 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065687 304 37.98 12 294 8 290 2.0e-50 193 COG1175 ABC-type sugar transport system, permease component 295 650065696 320 24.45 19 284 30 288 4.0e-24 105 COG2334 Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist 331 650065697 225 33.93 7 225 2 219 8.0e-40 157 COG0637 Beta-phosphoglucomutase or related phosphatase, HAD superfamily 221 650065698 761 37.5 3 755 11 766 0.0e+00 637 COG1554 Trehalose and maltose hydrolase (possible phosphorylase) 772 650065700 600 27.86 204 598 67 456 8.0e-41 162 COG2972 Sensor histidine kinase YesM 456 650065701 518 27.61 2 516 3 473 5.0e-59 222 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650065702 415 23.74 6 415 2 427 4.0e-29 122 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065703 314 38.18 21 314 1 291 5.0e-54 205 COG1175 ABC-type sugar transport system, permease component 295 650065704 274 35.97 3 273 5 281 1.0e-49 190 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065705 709 41.77 15 392 1 367 6.0e-79 289 COG1472 Periplasmic beta-glucosidase and related glycosidases 397 650065706 690 28.7 1 651 10 628 2.0e-96 347 COG3408 Glycogen debranching enzyme (alpha-1,6-glucosidase) 641 650065707 156 19.23 19 142 21 147 9.0e-05 39.6 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650065709 184 38.29 10 184 5 179 8.0e-44 169 COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 181 650065711 323 23.05 1 322 102 433 2.0e-33 136 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065712 289 45.17 1 289 7 295 5.0e-63 234 COG1175 ABC-type sugar transport system, permease component 295 650065713 286 36.33 13 286 7 281 2.0e-51 196 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065714 281 25.29 4 263 3 261 2.0e-39 156 COG0561 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases 264 650065715 220 32.71 1 194 23 236 3.0e-30 125 COG0584 Glycerophosphoryl diester phosphodiesterase 257 650065716 199 23.08 1 182 6 184 5.0e-09 54.7 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650065718 238 35.84 5 229 2 224 3.0e-40 158 COG2323 Uncharacterized membrane protein YcaP, DUF421 family 224 650065719 440 25.7 11 420 16 438 2.0e-44 173 COG2211 Na+/melibiose symporter or related transporter 467 650065720 304 22.54 1 280 1 255 5.0e-17 81.9 COG3394 Predicted glycoside hydrolase or deacetylase ChbG, UPF0249 family 257 650065722 455 27.66 124 447 5 328 2.0e-35 143 COG0642 Signal transduction histidine kinase 336 650065723 535 30.28 295 535 81 330 1.0e-31 131 COG0642 Signal transduction histidine kinase 336 650065724 540 37.43 1 537 1 532 0.0e+00 461 COG1283 Na+/phosphate symporter 533 650065727 338 19.75 29 320 3 310 6.0e-12 65.4 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650065728 360 22.78 24 336 8 288 2.0e-13 70.7 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 299 650065729 227 31.82 1 215 33 249 7.0e-38 150 COG1760 L-serine deaminase 262 650065730 309 40.68 16 278 10 262 2.0e-58 219 COG1760 L-serine deaminase 262 650065734 321 50.49 13 321 1 309 2.0e-95 342 COG4209 ABC-type polysaccharide transport system, permease component 309 650065735 292 32.53 9 291 5 281 6.0e-47 181 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065736 746 42.34 634 744 12 122 8.0e-22 99.6 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650065737 340 23.97 1 318 1 336 2.0e-21 96.6 COG1063 Threonine dehydrogenase or related Zn-dependent dehydrogenase 350 650065738 407 19.72 59 404 21 348 4.0e-08 53.1 COG3405 Endo-1,4-beta-D-glucanase Y 360 650065739 799 29.43 51 568 33 516 4.0e-89 323 COG3507 Beta-xylosidase 549 650065740 208 27.57 1 208 2 207 1.0e-27 116 COG0778 Nitroreductase 207 650065745 216 43.48 9 214 12 217 1.0e-46 179 COG0765 ABC-type amino acid transport system, permease component 222 650065746 219 42.47 1 218 3 221 1.0e-51 196 COG0765 ABC-type amino acid transport system, permease component 222 650065747 269 39.03 7 265 1 264 3.0e-38 152 COG0834 ABC-type amino acid transport/signal transduction system, periplasmic component/domain 275 650065748 249 63.33 8 247 2 240 1.0e-110 392 COG1126 ABC-type polar amino acid transport system, ATPase component 240 650065749 393 18.25 1 360 9 358 2.0e-08 53.6 COG1835 Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains 386 650065752 66 67.16 1 66 1 67 3.0e-22 96.7 COG1278 Cold shock protein, CspA family 67 650065755 293 26.69 3 292 1 281 7.0e-42 164 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065756 554 22.35 57 403 29 349 7.0e-15 75.8 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065762 464 30.61 10 449 18 455 6.0e-66 245 COG0534 Na+-driven multidrug efflux pump 455 650065763 180 28.9 4 169 3 175 2.0e-23 102 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065765 405 35.48 71 399 16 347 1.0e-63 237 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 351 650065767 346 37.46 5 342 1 333 8.0e-91 327 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650065768 437 24.6 1 434 1 431 1.0e-38 154 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065769 293 34.02 1 289 5 290 2.0e-51 196 COG1175 ABC-type sugar transport system, permease component 295 650065770 276 42.86 1 275 2 281 3.0e-59 221 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065771 413 21.14 1 401 3 342 2.0e-36 147 COG0673 Predicted dehydrogenase 342 650065774 245 26.53 1 239 1 234 2.0e-33 136 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 238 650065776 385 35.34 8 383 16 380 1.0e-66 247 COG1820 N-acetylglucosamine-6-phosphate deacetylase 380 650065777 666 31.73 4 666 1 619 4.0e-105 376 COG1506 Dipeptidyl aminopeptidase/acylaminoacyl peptidase 620 650065778 194 27.94 1 188 3 205 5.0e-18 84.6 COG0778 Nitroreductase 207 650065780 276 56.2 11 276 7 280 9.0e-105 373 COG0656 Aldo/keto reductase, related to diketogulonate reductase 280 650065783 135 22.86 3 125 1 138 4.0e-10 57.1 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650065784 353 40 1 350 3 309 2.0e-81 296 COG2152 Predicted glycosyl hydrolase, GH43/DUF377 family 314 650065786 546 35.56 12 518 1 501 4.0e-88 319 COG0366 Glycosidase 505 650065787 279 35.59 4 277 3 278 2.0e-48 186 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065788 293 39.25 1 291 3 295 2.0e-51 196 COG1175 ABC-type sugar transport system, permease component 295 650065789 439 23.82 5 439 3 430 1.0e-33 137 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065790 575 28.79 41 568 1 463 2.0e-91 330 COG1109 Phosphomannomutase 464 650065791 819 35.42 53 680 3 636 1.0e-109 391 COG0210 Superfamily I DNA or RNA helicase 655 650065793 166 29.27 5 164 16 179 4.0e-26 110 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065798 544 28.39 220 527 3 311 8.0e-43 168 COG2206 HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant) 344 650065801 67 46.38 1 67 1 69 4.0e-10 56.2 COG2608 Copper chaperone CopZ 71 650065802 246 35.92 1 187 2 207 4.0e-27 115 COG0778 Nitroreductase 207 650065803 772 40.59 669 768 21 121 2.0e-19 91.5 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650065805 307 48.49 9 307 11 309 6.0e-97 347 COG4209 ABC-type polysaccharide transport system, permease component 309 650065806 294 31.65 3 293 2 281 6.0e-49 188 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065807 517 22.32 14 446 4 416 8.0e-22 99 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065809 271 32.7 12 271 2 256 3.0e-40 158 COG0084 Tat protein secretion system quality control protein TatD (DNase activity) 256 650065810 279 50.39 23 276 1 247 1.0e-82 299 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 248 650065811 251 37.3 2 251 6 257 8.0e-47 180 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 258 650065812 97 31.25 2 96 1 96 9.0e-19 85.3 COG0011 Uncharacterized conserved protein YqgV, UPF0045/DUF77 family 100 650065813 343 27.1 38 341 22 327 2.0e-37 149 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component 335 650065814 143 22.46 20 142 1 138 5.0e-08 50.6 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650065815 509 45.98 315 487 1 173 1.0e-37 151 COG2199 GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants 181 650065818 769 45.71 2 766 1 767 0.0e+00 827 COG1554 Trehalose and maltose hydrolase (possible phosphorylase) 772 650065819 216 31.16 4 216 2 212 7.0e-41 160 COG0637 Beta-phosphoglucomutase or related phosphatase, HAD superfamily 221 650065820 344 41.19 3 336 1 328 6.0e-91 328 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650065821 564 35.25 70 526 2 492 1.0e-74 274 COG0366 Glycosidase 505 650065822 224 41.85 5 224 3 227 1.0e-50 193 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650065823 449 25.71 144 447 20 326 2.0e-26 113 COG0642 Signal transduction histidine kinase 336 650065824 306 35.55 7 302 4 293 1.0e-69 256 COG1131 ABC-type multidrug transport system, ATPase component 293 650065825 238 25.42 2 237 1 234 8.0e-23 100 COG4200 Uncharacterized protein 239 650065826 244 24.58 8 241 5 239 2.0e-24 106 COG4200 Uncharacterized protein 239 650065827 279 16.29 1 279 3 342 2.0e-06 46.8 COG0673 Predicted dehydrogenase 342 650065828 360 29.64 1 354 1 342 1.0e-59 223 COG0673 Predicted dehydrogenase 342 650065829 315 37.74 203 308 15 120 3.0e-23 102 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650065831 249 23.08 1 248 10 280 2.0e-22 99.8 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650065832 669 37.42 5 308 2 308 1.0e-66 248 COG0826 Collagenase-like protease, PrtC family 347 650065833 432 36.66 11 430 18 447 3.0e-106 378 COG0160 4-aminobutyrate aminotransferase or related aminotransferase 447 650065834 290 29.72 3 285 2 287 1.0e-32 133 COG0382 4-hydroxybenzoate polyprenyltransferase 289 650065835 582 29.59 131 544 1 493 2.0e-61 230 COG0366 Glycosidase 505 650065836 86 36.49 1 74 5 78 6.0e-15 72.6 COG1937 DNA-binding transcriptional regulator, FrmR family 89 650065837 337 56.59 2 334 7 340 1.0e-125 442 COG2130 NADPH-dependent curcumin reductase CurA 340 650065838 163 46.9 11 155 5 148 3.0e-28 118 COG4846 Membrane protein CcdC involved in cytochrome C biogenesis 163 650065839 163 23.68 1 148 6 157 2.0e-07 48.5 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650065840 239 25 1 227 4 225 8.0e-21 94.2 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650065842 183 30.9 5 172 3 180 6.0e-27 114 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065848 354 41.4 10 350 6 346 5.0e-81 294 COG2706 6-phosphogluconolactonase, cycloisomerase 2 family 346 650065850 359 65.92 5 358 4 347 0.0e+00 515 COG1613 ABC-type sulfate transport system, periplasmic component 348 650065851 282 56.88 14 282 6 274 5.0e-77 280 COG0555 ABC-type sulfate transport system, permease component 274 650065852 288 67.75 10 285 1 276 8.0e-109 386 COG4208 ABC-type sulfate transport system, permease component 287 650065853 73 34.09 8 51 7 50 5.0e-06 42.7 COG5583 Uncharacterized protein 54 650065855 327 19.03 84 326 19 282 3.0e-15 76.3 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650065856 250 30 5 113 1 108 4.0e-11 62.1 COG0789 DNA-binding transcriptional regulator, MerR family 124 650065858 210 49.06 1 210 1 211 6.0e-62 230 COG2910 Putative NADH-flavin reductase 211 650065859 583 44.1 116 275 45 203 6.0e-35 142 COG0062 NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain 203 650065859 583 46.86 314 583 23 277 2.0e-58 220 COG0063 NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domain 284 650065861 302 35.6 53 297 1 249 2.0e-52 199 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650065863 181 30.51 3 177 2 178 1.0e-23 102 COG0431 NAD(P)H-dependent FMN reductase 184 650065865 184 52.27 9 183 3 168 4.0e-51 194 COG3910 Predicted ATPase 233 650065867 135 30.61 21 118 15 112 2.0e-10 58.4 COG1846 DNA-binding transcriptional regulator, MarR family 126 650065869 265 62.4 1 250 7 256 1.0e-90 326 COG3739 Uncharacterized membrane protein YoaT, DUF817 family 263 650065871 313 29.51 1 182 3 184 3.0e-26 112 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650065873 343 31.88 5 342 3 343 4.0e-72 265 COG0208 Ribonucleotide reductase beta subunit, ferritin-like domain 348 650065874 777 34.01 53 776 11 654 0.0e+00 573 COG0209 Ribonucleotide reductase alpha subunit 696 650065875 101 50 1 100 2 100 4.0e-23 99.5 COG0011 Uncharacterized conserved protein YqgV, UPF0045/DUF77 family 100 650065878 243 38.46 1 182 42 231 1.0e-36 146 COG0860 N-acetylmuramoyl-L-alanine amidase 231 650065880 588 34.98 13 578 1 560 1.0e-100 361 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650065881 601 28.01 1 585 1 567 1.0e-81 297 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650065886 191 31.91 1 138 1 139 4.0e-16 78.1 COG4502 5'(3')-deoxyribonucleotidase 180 650065887 750 39.59 5 749 109 930 0.0e+00 770 COG0178 Excinuclease UvrABC ATPase subunit 935 650065888 558 42.78 9 532 1 505 5.0e-103 368 COG0366 Glycosidase 505 650065889 353 39.66 6 349 1 350 5.0e-80 291 COG1063 Threonine dehydrogenase or related Zn-dependent dehydrogenase 350 650065892 172 29.55 1 168 4 179 2.0e-18 85.9 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065902 255 33.07 1 249 2 255 7.0e-45 174 COG0805 Sec-independent protein secretion pathway component TatC 255 650065904 536 33.74 65 536 7 450 2.0e-84 307 COG1231 Monoamine oxidase 450 650065905 181 32.86 38 177 7 129 1.0e-16 79.6 COG0251 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family 130 650065907 67 38.46 1 65 3 67 1.0e-07 48 COG3237 Uncharacterized conserved protein YjbJ, UPF0337 family 67 650065909 386 18.75 21 347 57 400 5.0e-05 42.5 COG2270 MFS-type transporter involved in bile tolerance, Atg22 family 438 650065911 126 58.59 1 126 2 129 3.0e-37 147 COG0251 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family 130 650065912 309 26.03 11 293 36 319 3.0e-29 122 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650065917 293 35.25 1 293 1 294 2.0e-52 199 COG1175 ABC-type sugar transport system, permease component 295 650065918 278 36.65 1 277 1 281 9.0e-51 193 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065919 429 24.83 2 429 1 432 8.0e-38 151 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065922 933 26.35 304 933 73 770 1.0e-65 245 COG0553 Superfamily II DNA or RNA helicase, SNF2 family 866 650065925 292 37.32 75 282 33 241 4.0e-46 178 COG1876 LD-carboxypeptidase LdcB, LAS superfamily 241 650065930 365 25.52 103 365 2 284 1.0e-26 114 COG1408 Predicted phosphohydrolase, MPP superfamily 284 650065931 189 34.44 1 180 5 179 6.0e-33 133 COG0503 Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein 179 650065932 375 46.84 14 355 10 356 8.0e-87 314 COG2233 Xanthine/uracil permease 451 650065936 112 44.66 10 112 1 103 2.0e-20 91.1 COG4818 Uncharacterized membrane protein 105 650065939 349 22.98 48 317 64 363 1.0e-26 113 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650065942 249 46.61 1 249 1 251 1.0e-78 286 COG0024 Methionine aminopeptidase 255 650065943 349 42.92 11 243 1 227 2.0e-56 212 COG1622 Heme/copper-type cytochrome/quinol oxidase, subunit 2 247 650065944 577 55.01 12 576 2 565 0.0e+00 591 COG0843 Heme/copper-type cytochrome/quinol oxidase, subunit 1 566 650065946 206 42.64 8 203 14 207 2.0e-41 162 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 209 650065947 109 26.74 24 108 17 102 3.0e-08 50.2 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 111 650065948 302 28.86 1 288 1 296 2.0e-43 170 COG3336 Cytochrome c oxidase assembly factor CtaG 299 650065949 154 36.57 6 139 44 177 2.0e-25 108 COG2322 Uncharacterized membrane protein YozB, DUF420 family 177 650065951 133 34.96 4 126 1 123 1.0e-23 102 COG1725 DNA-binding transcriptional regulator YhcF, GntR family 125 650065952 300 29.31 5 285 4 286 6.0e-46 177 COG1131 ABC-type multidrug transport system, ATPase component 293 650065953 300 49.66 4 300 3 300 2.0e-94 339 COG4152 ABC-type uncharacterized transport system, ATPase component 300 650065954 434 27.29 1 423 1 399 4.0e-38 152 COG1668 ABC-type Na+ efflux pump, permease component 407 650065956 723 16.2 13 722 4 705 1.0e-09 58.6 COG5295 Autotransporter adhesin 715 650065957 325 37.2 14 322 23 314 1.0e-47 184 COG1262 Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain 314 650065958 176 32.95 2 176 7 178 3.0e-23 101 COG2059 Chromate transport protein ChrA 195 650065959 215 35.15 20 181 9 173 4.0e-26 111 COG2059 Chromate transport protein ChrA 195 650065960 512 23.83 1 509 1 473 1.0e-51 197 COG3119 Arylsulfatase A or related enzyme 475 650065961 284 38.78 183 280 22 119 1.0e-21 97.2 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650065964 513 17.65 43 377 30 349 1.0e-13 71.6 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065965 320 43.09 17 320 6 309 6.0e-92 331 COG4209 ABC-type polysaccharide transport system, permease component 309 650065966 297 29.73 7 296 1 281 2.0e-46 179 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065967 677 27.96 207 670 50 501 7.0e-62 232 COG3534 Alpha-L-arabinofuranosidase 501 650065968 432 38.17 5 430 3 420 1.0e-101 363 COG1253 Hemolysin or related protein, contains CBS domains 429 650065969 355 41.33 5 349 3 339 1.0e-84 307 COG1253 Hemolysin or related protein, contains CBS domains 429 650065970 1040 35.15 50 923 7 808 0.0e+00 547 COG3250 Beta-galactosidase/beta-glucuronidase 808 650065971 197 19.79 1 192 6 194 5.0e-07 47.7 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650065972 259 25.53 1 256 2 281 2.0e-28 119 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650065973 398 25.25 1 394 2 392 1.0e-47 184 COG1960 Acyl-CoA dehydrogenase related to the alkylation response protein AidB 393 650065975 257 40.86 3 95 1 93 6.0e-17 81.3 COG0789 DNA-binding transcriptional regulator, MerR family 124 650065978 171 25.74 35 161 19 139 2.0e-03 36.1 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650065980 471 53.65 93 471 30 411 0.0e+00 482 COG0281 Malic enzyme 432 650065982 345 38.08 15 299 7 308 4.0e-61 228 COG3397 Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains 308 650065983 409 35.42 138 406 75 335 1.0e-45 177 COG0642 Signal transduction histidine kinase 336 650065984 230 38.12 1 202 1 201 9.0e-55 206 COG1349 DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family 253 650065985 262 43.92 1 238 90 338 4.0e-65 241 COG3839 ABC-type sugar transport system, ATPase component 338 650065986 292 42.71 1 292 1 294 1.0e-58 220 COG1175 ABC-type sugar transport system, permease component 295 650065987 277 38.79 1 277 1 281 3.0e-56 212 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065988 437 26.55 1 437 1 432 6.0e-43 168 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065989 255 33.73 11 251 6 257 1.0e-36 146 COG0584 Glycerophosphoryl diester phosphodiesterase 257 650065990 406 29.16 31 395 13 337 2.0e-55 209 COG0371 Glycerol dehydrogenase or related enzyme, iron-containing ADH family 360 650065993 237 27.65 1 149 13 182 1.0e-14 74 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650065994 406 26.8 1 390 2 404 3.0e-37 149 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650065995 288 37.24 1 288 5 294 1.0e-54 207 COG1175 ABC-type sugar transport system, permease component 295 650065996 272 32.61 2 272 7 281 5.0e-43 168 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650065997 332 33.53 1 327 4 340 2.0e-61 229 COG0673 Predicted dehydrogenase 342 650065998 331 32.66 1 329 1 342 3.0e-52 199 COG0673 Predicted dehydrogenase 342 650066001 280 46.07 1 280 1 269 4.0e-64 238 COG1968 Undecaprenyl pyrophosphate phosphatase UppP 270 650066002 203 31.4 1 203 3 205 5.0e-32 131 COG0586 Uncharacterized membrane protein DedA, SNARE-associated domain 208 650066007 336 22.22 14 327 9 327 8.0e-28 117 COG0642 Signal transduction histidine kinase 336 650066008 233 39.13 3 229 2 229 8.0e-52 197 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650066011 497 34.36 173 493 20 328 3.0e-43 169 COG0642 Signal transduction histidine kinase 336 650066012 228 44.2 8 224 2 224 3.0e-57 214 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650066015 65 77.78 1 63 1 63 1.0e-20 90.8 COG4895 Uncharacterized protein YwbE 63 650066018 161 63.35 1 161 2 162 3.0e-61 227 COG1956 GAF domain-containing protein, putative methionine-R-sulfoxide reductase 163 650066021 193 29.95 7 189 1 187 6.0e-22 97.3 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650066022 251 27.42 3 250 5 248 7.0e-21 94.7 COG0619 Energy-coupling factor transporter transmembrane protein EcfT 252 650066023 196 31.49 17 192 9 188 1.0e-14 73.4 COG4721 ABC-type thiamine/hydroxymethylpyrimidine transport system, permease component 192 650066025 293 32.42 78 293 1 212 5.0e-40 158 COG1122 Energy-coupling factor transporter ATP-binding protein EcfA2 235 650066026 504 15.79 18 345 20 380 4.0e-14 73.3 COG2814 Predicted arabinose efflux permease, MFS family 394 650066028 563 16.89 54 392 27 374 8.0e-09 55.8 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066029 296 41.41 1 296 13 309 3.0e-89 322 COG4209 ABC-type polysaccharide transport system, permease component 309 650066030 292 31.86 3 291 2 281 3.0e-43 168 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066031 690 42.4 8 686 9 672 0.0e+00 618 COG1874 Beta-galactosidase GanA 673 650066032 350 39.27 5 324 2 346 2.0e-71 262 COG3867 Arabinogalactan endo-1,4-beta-galactosidase 403 650066033 155 30.48 38 142 19 123 1.0e-13 69.2 COG1846 DNA-binding transcriptional regulator, MarR family 126 650066034 452 18.26 77 441 58 394 3.0e-09 56.8 COG2814 Predicted arabinose efflux permease, MFS family 394 650066037 421 23.24 12 377 5 344 1.0e-11 64.9 COG4473 Predicted ABC-type exoprotein transport system, permease component 379 650066038 425 47.27 1 421 1 408 0.0e+00 485 COG2081 Predicted flavoprotein YhiN 408 650066041 269 39.16 17 269 3 256 4.0e-61 228 COG0171 NH3-dependent NAD+ synthetase 268 650066042 130 43.75 1 128 1 124 3.0e-27 114 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 127 650066043 380 42.4 4 377 5 340 1.0e-104 373 COG1194 Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs 342 650066044 414 18.72 64 390 85 430 1.0e-05 44.4 COG2271 Sugar phosphate permease 448 650066045 202 63.9 1 202 2 202 7.0e-79 286 COG0605 Superoxide dismutase 204 650066047 188 50 1 165 1 166 2.0e-55 208 COG1136 ABC-type lipoprotein export system, ATPase component 226 650066049 442 22.02 11 440 22 406 6.0e-20 92.3 COG4591 ABC-type transport system, involved in lipoprotein release, permease component 408 650066050 362 22.65 1 362 1 354 3.0e-19 89.4 COG0845 Multidrug efflux pump subunit AcrA (membrane-fusion protein) 372 650066051 140 27.21 3 123 14 149 4.0e-08 50.8 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650066053 617 43.24 18 354 2 337 4.0e-92 332 COG1600 Epoxyqueuosine reductase QueG (queuosine biosynthesis) 337 650066055 197 58.7 14 196 10 193 3.0e-73 267 COG0302 GTP cyclohydrolase I 195 650066059 389 48.26 188 383 4 203 2.0e-67 250 COG0605 Superoxide dismutase 204 650066061 246 40.25 9 243 1 241 2.0e-46 179 COG1414 DNA-binding transcriptional regulator, IclR family 246 650066062 365 27.37 8 365 5 348 4.0e-36 145 COG4194 Uncharacterized membrane protein 350 650066063 132 40.16 3 124 2 123 5.0e-30 123 COG1725 DNA-binding transcriptional regulator YhcF, GntR family 125 650066065 905 61.8 5 902 1 861 0.0e+00 1205 COG1048 Aconitase A 861 650066067 364 39.66 5 349 2 317 2.0e-85 309 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 317 650066069 336 36.2 1 332 25 346 2.0e-80 293 COG4294 UV DNA damage repair endonuclease 347 650066070 287 46.47 14 279 2 260 1.0e-65 243 COG0483 Archaeal fructose-1,6-bisphosphatase or related enzyme of inositol monophosphatase family 260 650066073 420 19.68 42 288 10 208 5.0e-07 49.5 COG2755 Lysophospholipase L1 or related esterase 216 650066075 248 48.21 1 248 2 252 1.0e-78 285 COG0024 Methionine aminopeptidase 255 650066077 440 27.16 1 440 1 472 5.0e-54 205 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650066078 311 32.76 24 310 1 290 3.0e-50 192 COG1175 ABC-type sugar transport system, permease component 295 650066079 288 30.3 28 287 18 281 1.0e-42 166 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066080 482 21.35 1 451 1 425 3.0e-25 110 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066082 438 55.15 3 438 2 431 0.0e+00 589 COG0001 Glutamate-1-semialdehyde aminotransferase 432 650066083 352 32.98 2 283 1 261 3.0e-46 179 COG1316 Anionic cell wall polymer biosynthesis enzyme, LytR-Cps2A-Psr (LCP) family 307 650066084 151 59.73 1 149 4 152 1.0e-58 218 COG1225 Peroxiredoxin 157 650066085 284 40.08 41 281 37 275 3.0e-47 182 COG1741 Redox-sensitive bicupin YhaK, pirin superfamily 276 650066086 435 32.92 40 277 19 254 4.0e-32 132 COG0726 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family 267 650066087 156 23.33 31 150 27 145 6.0e-09 53.8 COG2427 Uncharacterized conserved protein YjgD, DUF1641 family 148 650066088 391 42.28 1 390 2 391 8.0e-104 370 COG1252 NADH dehydrogenase, FAD-containing subunit 405 650066090 515 23.74 1 514 1 475 1.0e-57 217 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650066091 440 23.87 10 435 7 433 3.0e-44 172 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066092 317 42.25 31 312 7 290 4.0e-65 241 COG1175 ABC-type sugar transport system, permease component 295 650066093 277 42.14 1 276 2 281 2.0e-61 229 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066094 513 25.73 1 505 1 471 6.0e-59 222 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650066095 614 23.71 113 594 17 456 5.0e-44 172 COG2972 Sensor histidine kinase YesM 456 650066096 510 26.9 3 506 2 471 2.0e-56 213 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650066097 533 19.95 39 439 41 430 6.0e-12 66.2 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066098 287 49.83 1 286 24 308 9.0e-90 323 COG4209 ABC-type polysaccharide transport system, permease component 309 650066099 319 32.34 22 318 2 281 7.0e-45 174 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066100 767 44.41 5 324 3 329 5.0e-74 272 COG0714 MoxR-like ATPase 329 650066102 512 67.72 197 512 1 315 0.0e+00 539 COG0519 GMP synthase, PP-ATPase domain/subunit 315 650066104 456 50.55 1 454 6 436 3.0e-92 332 COG2252 Xanthine/uracil/vitamin C permease, AzgA family 436 650066106 301 29.57 1 300 1 297 9.0e-35 140 COG0583 DNA-binding transcriptional regulator, LysR family 297 650066107 344 44.63 3 323 6 352 3.0e-98 352 COG3842 ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components 352 650066108 354 32.65 70 351 1 290 1.0e-40 160 COG1840 ABC-type Fe3+ transport system, periplasmic component 299 650066109 561 29.67 6 550 1 529 2.0e-62 234 COG1178 ABC-type Fe3+ transport system, permease component 540 650066110 438 27.49 2 436 1 425 6.0e-45 175 COG1236 RNA processing exonuclease, beta-lactamase fold, Cft2 family 427 650066111 326 52.34 5 325 3 323 4.0e-109 388 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 323 650066112 447 20.22 3 446 1 432 6.0e-30 125 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066113 318 37.41 25 315 7 295 3.0e-53 202 COG1175 ABC-type sugar transport system, permease component 295 650066114 287 38.63 14 286 6 281 2.0e-58 219 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066115 573 31.12 200 573 97 455 3.0e-48 186 COG2972 Sensor histidine kinase YesM 456 650066116 447 22.82 32 433 23 425 9.0e-37 148 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066117 532 27.31 8 527 2 473 1.0e-59 224 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650066118 323 32.12 4 129 1 137 4.0e-08 52.5 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650066119 318 29.72 1 318 5 311 3.0e-39 155 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650066120 297 27.69 9 265 3 245 7.0e-22 98 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650066121 85 45.68 1 78 1 81 2.0e-05 41.2 COG2261 Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family 82 650066122 244 23.35 16 211 15 210 3.0e-18 85.4 COG3884 Acyl-ACP thioesterase 250 650066123 232 39.39 2 228 1 229 1.0e-46 179 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650066124 326 26.09 17 326 13 327 2.0e-33 136 COG0642 Signal transduction histidine kinase 336 650066125 256 50 3 224 1 224 2.0e-75 275 COG1136 ABC-type lipoprotein export system, ATPase component 226 650066129 711 34.98 2 595 1 567 0.0e+00 497 COG0550 DNA topoisomerase IA 570 650066132 144 37.33 1 144 3 151 3.0e-18 84.6 COG0589 Nucleotide-binding universal stress protein, UspA family 154 650066133 161 67.7 1 161 1 159 3.0e-64 237 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 162 650066134 395 49.73 19 389 1 364 6.0e-129 454 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 375 650066135 431 50.46 1 431 1 438 0.0e+00 545 COG0015 Adenylosuccinate lyase 438 650066136 296 34.28 16 293 5 247 1.0e-51 196 COG0152 Phosphoribosylaminoimidazole-succinocarboxamide synthase 247 650066137 81 56.25 1 80 1 80 5.0e-23 99.1 COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component 83 650066138 229 56.39 1 217 3 228 3.0e-90 324 COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 231 650066139 747 51.14 9 740 7 743 0.0e+00 937 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 743 650066140 492 56.32 29 487 1 462 0.0e+00 647 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 470 650066141 346 61.95 1 339 2 339 0.0e+00 472 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase 345 650066142 203 48.74 5 203 2 200 6.0e-72 263 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 200 650066143 515 62.93 3 515 2 515 0.0e+00 769 COG0138 AICAR transformylase/IMP cyclohydrolase PurH 515 650066145 422 57.55 1 421 1 423 0.0e+00 552 COG0151 Phosphoribosylamine-glycine ligase 428 650066146 436 36.55 40 428 22 412 2.0e-75 276 COG2182 Maltose-binding periplasmic protein MalE 420 650066147 437 31.35 132 433 8 293 4.0e-51 195 COG1175 ABC-type sugar transport system, permease component 295 650066148 280 53.57 1 280 3 282 2.0e-80 292 COG3833 ABC-type maltose transport system, permease component 282 650066149 678 27.49 293 663 54 407 1.0e-35 145 COG0840 Methyl-accepting chemotaxis protein 408 650066150 713 25.79 43 450 2 416 7.0e-48 185 COG0366 Glycosidase 505 650066151 378 30.49 22 375 43 385 1.0e-36 147 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650066152 318 28.68 188 309 19 154 6.0e-05 41.9 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650066153 235 22.77 1 197 5 202 1.0e-19 90.1 COG2120 N-acetylglucosaminyl deacetylase, LmbE family 237 650066154 199 48.48 15 179 18 182 2.0e-45 175 COG0400 Predicted esterase 207 650066155 315 37.93 24 312 3 290 6.0e-61 228 COG1175 ABC-type sugar transport system, permease component 295 650066156 279 38.79 1 278 1 281 1.0e-55 210 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066157 459 20.13 4 457 2 433 7.0e-28 118 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066158 603 25.53 174 598 78 453 1.0e-39 158 COG2972 Sensor histidine kinase YesM 456 650066159 540 22.53 1 492 1 475 9.0e-34 138 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650066162 650 38.98 13 484 16 457 9.0e-105 374 COG4289 Uncharacterized protein 458 650066164 422 51 6 351 2 347 1.0e-121 430 COG1171 Threonine dehydratase 347 650066167 111 42.99 6 110 4 108 1.0e-17 81.4 COG1695 DNA-binding transcriptional regulator, PadR family 138 650066169 275 21.71 9 263 28 297 4.0e-10 59 COG1073 Fermentation-respiration switch protein FrsA, has esterase activity, DUF1100 family 299 650066170 258 46.97 1 258 7 267 2.0e-66 245 COG3384 Aromatic ring-opening dioxygenase, catalytic subunit, LigB family 268 650066172 179 21.02 7 153 7 142 4.0e-05 41.1 COG2259 Uncharacterized membrane protein YphA, DoxX/SURF4 family 142 650066174 174 22.08 9 152 9 141 7.0e-05 40.4 COG2259 Uncharacterized membrane protein YphA, DoxX/SURF4 family 142 650066175 178 24 14 153 14 142 3.0e-05 41.5 COG2259 Uncharacterized membrane protein YphA, DoxX/SURF4 family 142 650066178 204 30.81 1 203 7 217 3.0e-29 121 COG1392 Uncharacterized conserved protein YkaA, distantly related to PhoU, UPF0111/DUF47 family 217 650066179 329 40.55 5 328 2 322 4.0e-62 232 COG0306 Phosphate/sulfate permease 326 650066180 318 36.72 18 317 22 322 2.0e-63 236 COG0598 Mg2+ and Co2+ transporter CorA 322 650066183 96 70.21 1 94 1 94 1.0e-35 141 COG4496 Uncharacterized protein YerC 100 650066184 244 19.91 26 235 36 236 1.0e-11 63.5 COG2138 Sirohydrochlorin ferrochelatase 245 650066185 293 45.08 1 293 2 294 7.0e-76 277 COG1597 Diacylglycerol kinase family enzyme 301 650066186 502 43.25 30 495 1 432 0.0e+00 477 COG2265 tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family 432 650066188 170 19.46 2 159 35 215 2.0e-03 35.7 COG1738 Uncharacterized PurR-regulated membrane protein YhhQ, DUF165 family 233 650066194 223 47 4 216 1 214 8.0e-77 279 COG0603 7-cyano-7-deazaguanine synthase (queuosine biosynthesis) 222 650066195 163 39.84 35 159 5 127 4.0e-21 94.2 COG0720 6-pyruvoyl-tetrahydropterin synthase 127 650066196 244 29.66 5 240 1 212 6.0e-47 180 COG0602 Organic radical activating enzyme 212 650066201 234 18.64 27 193 59 226 1.0e-03 37.4 COG2120 N-acetylglucosaminyl deacetylase, LmbE family 237 650066222 329 30.34 4 316 3 317 5.0e-66 244 COG0042 tRNA-dihydrouridine synthase 323 650066226 353 37.45 73 324 70 328 4.0e-47 182 COG3344 Retron-type reverse transcriptase 328 650066233 334 17.93 2 330 49 330 9.0e-26 111 COG0620 Methionine synthase II (cobalamin-independent) 330 650066237 234 46.46 4 223 1 226 4.0e-74 271 COG1136 ABC-type lipoprotein export system, ATPase component 226 650066238 775 18 1 384 6 406 8.0e-11 63 COG4591 ABC-type transport system, involved in lipoprotein release, permease component 408 650066239 329 26.69 1 314 6 330 2.0e-43 169 COG0673 Predicted dehydrogenase 342 650066241 82 47.44 1 78 1 74 2.0e-08 50.8 COG4997 Predicted house-cleaning noncanonical NTP pyrophosphatase, all-alpha NTP-PPase (MazG) superfamily 95 650066251 316 20.49 59 298 53 284 2.0e-08 53.7 COG5006 Threonine/homoserine efflux transporter RhtA 292 650066252 450 30.91 18 447 5 434 2.0e-62 233 COG2233 Xanthine/uracil permease 451 650066253 454 26.63 71 451 56 407 5.0e-55 209 COG0402 Cytosine/adenosine deaminase or related metal-dependent hydrolase 421 650066257 250 40.97 114 248 37 178 7.0e-28 117 COG2032 Cu/Zn superoxide dismutase 179 650066258 76 37.04 1 76 2 82 4.0e-15 72.7 COG2336 Antitoxin component of the MazEF toxin-antitoxin module 82 650066259 113 42.34 6 112 1 110 1.0e-23 101 COG2337 mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module 112 650066265 291 24.1 7 286 21 316 1.0e-16 80.4 COG0535 Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family 347 650066266 506 38.52 16 498 28 509 9.0e-113 401 COG0513 Superfamily II DNA and RNA helicase 513 650066267 225 23.6 21 189 45 220 6.0e-08 51.4 COG2226 Ubiquinone/menaquinone biosynthesis C-methylase UbiE 238 650066268 215 20.99 28 199 30 210 5.0e-16 78 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650066272 201 51.69 105 193 2 89 7.0e-22 97.3 COG3860 Uncharacterized protein 89 650066277 228 32.11 1 217 1 218 4.0e-46 178 COG0819 Thiaminase 218 650066278 279 51.15 12 272 7 265 3.0e-69 255 COG2145 Hydroxyethylthiazole kinase, sugar kinase family 265 650066280 211 45.28 1 209 1 207 1.0e-45 176 COG0352 Thiamine monophosphate synthase 211 650066281 390 25.88 1 383 1 396 6.0e-46 178 COG1301 Na+/H+-dicarboxylate symporter 415 650066284 398 23.08 1 91 2 92 1.0e-05 44.9 COG4842 Uncharacterized conserved protein YukE 97 650066289 630 24.44 309 572 16 271 3.0e-16 80.7 COG2339 Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family 274 650066291 471 52.11 1 471 4 477 0.0e+00 550 COG0469 Pyruvate kinase 477 650066292 259 29.84 134 257 1 124 1.0e-18 87.2 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650066293 315 28.98 1 312 1 291 5.0e-49 188 COG1316 Anionic cell wall polymer biosynthesis enzyme, LytR-Cps2A-Psr (LCP) family 307 650066294 347 35.21 10 347 5 333 7.0e-74 271 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650066295 442 28.03 4 441 3 433 2.0e-41 163 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066296 282 40.57 5 281 1 281 1.0e-56 213 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066297 294 36.95 3 294 2 294 2.0e-56 213 COG1175 ABC-type sugar transport system, permease component 295 650066300 233 27.35 1 220 6 222 9.0e-29 120 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650066302 248 35.9 3 111 1 117 2.0e-14 73.2 COG0789 DNA-binding transcriptional regulator, MerR family 124 650066303 113 45.92 15 112 7 104 7.0e-28 115 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650066304 312 48.9 1 312 1 309 2.0e-85 309 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650066305 324 46.84 1 309 1 308 2.0e-88 319 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650066308 167 29.49 1 154 1 143 4.0e-11 61.1 COG2954 CYTH domain, found in class IV adenylate cyclase and various triphosphatases 156 650066309 309 25.41 1 180 30 193 1.0e-07 50.6 COG2340 Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain 207 650066313 120 45.76 1 118 2 118 7.0e-31 125 COG2315 Predicted DNA-binding protein with ?double-wing? structural motif, MmcQ/YjbR family 118 650066316 450 27.79 8 446 13 447 1.0e-51 197 COG0534 Na+-driven multidrug efflux pump 455 650066317 873 27.45 4 871 2 892 2.0e-100 361 COG2909 ATP-, maltotriose- and DNA-dependent transcriptional regulator MalT 894 650066318 667 27.03 43 378 58 435 2.0e-45 177 COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 476 650066320 497 50.5 1 494 3 501 0.0e+00 575 COG3845 ABC-type uncharacterized transport system, ATPase component 501 650066321 355 37.11 1 352 5 355 6.0e-62 231 COG4603 ABC-type uncharacterized transport system, permease component 356 650066322 224 41.83 11 209 46 253 2.0e-49 188 COG2041 Periplasmic DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit 271 650066323 243 35.86 6 232 9 244 1.0e-44 173 COG2820 Uridine phosphorylase 248 650066324 156 19.74 6 147 5 156 5.0e-10 57.3 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650066326 172 23.17 1 163 4 167 9.0e-07 46.6 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650066327 318 20 3 248 2 259 1.0e-14 74.2 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650066329 155 31.06 5 153 19 178 2.0e-18 85.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650066333 625 46.42 3 624 6 618 0.0e+00 684 COG0326 Molecular chaperone, HSP90 family 623 650066335 383 25 12 373 18 388 4.0e-26 112 COG2814 Predicted arabinose efflux permease, MFS family 394 650066338 128 41.8 1 122 1 120 9.0e-28 115 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650066344 453 23.96 4 450 1 433 5.0e-38 152 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066345 321 43.43 23 317 1 290 8.0e-67 247 COG1175 ABC-type sugar transport system, permease component 295 650066346 274 37.91 2 274 5 281 4.0e-55 208 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066347 292 26.39 4 286 2 274 2.0e-28 119 COG1082 Sugar phosphate isomerase/epimerase 274 650066348 336 25.6 7 328 5 330 2.0e-27 116 COG0673 Predicted dehydrogenase 342 650066349 342 30.21 7 336 3 341 2.0e-55 210 COG0673 Predicted dehydrogenase 342 650066350 262 28.98 23 261 7 238 1.0e-40 160 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 238 650066351 387 36.31 26 384 25 380 1.0e-68 254 COG1820 N-acetylglucosamine-6-phosphate deacetylase 380 650066352 162 17.83 7 161 3 159 4.0e-05 41.1 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650066355 483 24.6 47 467 4 402 2.0e-43 170 COG2312 Erythromycin esterase homolog 405 650066356 65 56.92 1 65 2 65 2.0e-17 80.6 COG1476 DNA-binding transcriptional regulator, XRE-family HTH domain 68 650066358 300 21.23 50 249 9 197 1.0e-04 41 COG2226 Ubiquinone/menaquinone biosynthesis C-methylase UbiE 238 650066359 143 35.51 4 140 1 133 4.0e-29 120 COG2764 Uncharacterized conserved protein PhnB, glyoxalase superfamily 136 650066361 502 43.77 222 501 6 286 6.0e-66 245 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650066362 480 44.09 171 474 2 314 1.0e-81 297 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650066363 580 54.96 1 538 2 538 0.0e+00 705 COG1123 ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain 539 650066364 211 23 1 204 2 206 3.0e-15 75.3 COG2755 Lysophospholipase L1 or related esterase 216 650066365 373 27.18 50 331 29 309 2.0e-26 113 COG1879 ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain 322 650066366 331 38.22 19 330 7 311 7.0e-48 184 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component 316 650066369 332 27.22 1 321 2 333 2.0e-46 179 COG0673 Predicted dehydrogenase 342 650066370 358 26.67 6 330 13 330 3.0e-49 189 COG3239 Fatty acid desaturase 343 650066371 377 23.32 1 365 4 364 3.0e-46 179 COG4585 Signal transduction histidine kinase 365 650066372 200 39.9 2 198 1 208 4.0e-48 184 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650066375 162 47.8 4 162 3 160 4.0e-39 153 COG0490 K+/H+ antiporter YhaU, regulatory subunit KhtT 162 650066376 249 32.14 1 244 1 249 4.0e-42 165 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650066378 394 17.66 9 356 12 349 3.0e-08 53.2 COG1835 Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains 386 650066379 230 41.85 6 230 3 226 2.0e-61 229 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650066382 748 17.88 407 707 32 339 9.0e-04 39.4 COG1520 Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat 370 650066387 484 21.41 55 482 33 461 5.0e-24 106 COG0471 Di- and tricarboxylate transporter 461 650066390 769 31.97 648 769 2 123 2.0e-19 91.8 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650066391 306 47.87 2 306 7 309 3.0e-95 341 COG4209 ABC-type polysaccharide transport system, permease component 309 650066392 286 30.14 10 285 8 281 2.0e-45 176 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066393 516 22.34 3 374 2 349 3.0e-20 93.6 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066394 119 35.34 1 114 3 103 6.0e-17 79.6 COG2146 Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase 106 650066396 180 35.06 5 178 8 181 7.0e-30 123 COG2059 Chromate transport protein ChrA 195 650066397 189 36.93 2 177 9 184 6.0e-33 133 COG2059 Chromate transport protein ChrA 195 650066398 160 32.89 14 160 6 154 7.0e-28 116 COG1522 DNA-binding transcriptional regulator, Lrp family 154 650066399 365 26.5 54 356 38 350 4.0e-35 142 COG2843 Poly-gamma-glutamate biosynthesis protein CapA/YwtB (capsule formation), metallophosphatase superfamily 372 650066401 108 25 12 104 1 100 6.0e-11 59.2 COG2329 Heme-degrading monooxygenase HmoA and related ABM domain proteins 105 650066402 332 28.07 6 331 1 339 5.0e-49 188 COG0673 Predicted dehydrogenase 342 650066404 1191 29.88 472 874 30 415 3.0e-75 277 COG1649 Uncharacterized lipoprotein YddW, UPF0748 family 418 650066405 212 22 1 198 14 213 3.0e-20 91.9 COG0398 Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain 223 650066406 556 20.77 1 539 1 489 5.0e-48 185 COG3428 Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain 494 650066407 160 32.92 4 159 2 160 2.0e-25 108 COG3402 Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain 161 650066408 261 31.2 1 234 5 233 4.0e-42 165 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650066410 169 29.03 14 167 6 154 2.0e-16 78.5 COG3708 Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain 157 650066414 758 46.45 6 643 3 645 0.0e+00 651 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 822 650066416 296 47.62 3 296 16 309 1.0e-93 336 COG4209 ABC-type polysaccharide transport system, permease component 309 650066417 293 31.54 1 292 1 281 2.0e-45 176 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066418 539 19.8 3 394 1 349 3.0e-18 87 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066420 1274 34.94 308 823 20 517 5.0e-88 320 COG0737 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family 517 650066422 327 22.14 23 162 1 140 4.0e-04 39.4 COG2510 Uncharacterized membrane protein 140 650066423 180 26.23 2 179 1 179 4.0e-13 67.8 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650066425 320 47.25 13 320 1 309 2.0e-86 312 COG4209 ABC-type polysaccharide transport system, permease component 309 650066426 290 28.81 1 289 1 281 1.0e-42 166 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066428 266 26.29 29 257 30 244 1.0e-19 90.8 COG0327 Putative GTP cyclohydrolase 1 type 2, NIF3 family 250 650066429 224 28.23 1 208 7 214 2.0e-31 129 COG1802 DNA-binding transcriptional regulator, GntR family 230 650066430 693 56.43 17 693 11 682 0.0e+00 929 COG3661 Alpha-glucuronidase 684 650066431 257 42.91 1 253 18 270 1.0e-67 249 COG4326 Sporulation-control protein spo0M 270 650066432 532 46.14 84 522 3 432 2.0e-130 460 COG2265 tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family 432 650066433 515 29.11 1 231 1 222 1.0e-22 101 COG1961 Site-specific DNA recombinase related to the DNA invertase Pin 222 650066442 573 17.26 1 571 4 590 2.0e-15 78.1 COG5293 Uncharacterized protein YydD, contains DUF2326 domain 591 650066447 950 34.33 106 419 13 347 2.0e-21 98.7 COG3391 DNA-binding beta-propeller fold protein YncE 381 650066449 306 26.29 47 296 32 225 1.0e-18 87.7 COG3910 Predicted ATPase 233 650066451 191 41.76 5 94 4 93 1.0e-13 69.9 COG1825 Ribosomal protein L25 (general stress protein Ctc) 93 650066452 235 17.16 33 201 41 204 1.0e-04 40 COG4912 3-methyladenine DNA glycosylase AlkD 222 650066454 287 31.09 1 233 1 227 4.0e-39 155 COG0030 16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity) 259 650066455 125 29.03 1 123 1 124 1.0e-15 75.2 COG0789 DNA-binding transcriptional regulator, MerR family 124 650066460 570 22.25 23 356 23 371 9.0e-32 132 COG2730 Aryl-phospho-beta-D-glucosidase BglC, GH1 family 407 650066465 160 26.06 11 132 7 148 7.0e-10 57 COG3832 Uncharacterized conserved protein YndB, AHSA1/START domain 149 650066466 334 23.1 8 323 8 324 2.0e-32 133 COG4927 Predicted choloylglycine hydrolase 336 650066469 577 38.22 3 571 2 567 7.0e-123 434 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650066470 619 42.86 40 613 3 564 0.0e+00 499 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650066472 258 21.67 3 258 8 268 6.0e-19 88 COG4587 ABC-type uncharacterized transport system, permease component 268 650066473 266 25.09 4 266 2 260 7.0e-28 117 COG3694 ABC-type uncharacterized transport system, permease component 260 650066474 330 44.55 1 330 3 321 9.0e-87 313 COG4586 ABC-type uncharacterized transport system, ATPase component 325 650066477 278 44.44 1 277 2 268 5.0e-71 261 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 268 650066478 410 48.19 1 409 3 414 2.0e-121 429 COG2195 Di- or tripeptidase 414 650066479 336 43.9 3 242 9 252 4.0e-58 218 COG0476 Molybdopterin or thiamine biosynthesis adenylyltransferase 254 650066480 206 46.63 1 206 3 209 2.0e-53 201 COG0352 Thiamine monophosphate synthase 211 650066481 66 33.33 1 66 3 68 5.0e-08 49.4 COG2104 Sulfur carrier protein ThiS (thiamine biosynthesis) 68 650066482 260 56.98 1 258 2 259 7.0e-96 343 COG2022 Thiamin biosynthesis thiazole synthase ThiGH, ThiG subunit 262 650066483 375 31.95 1 371 3 382 5.0e-47 182 COG0665 Glycine/D-amino acid oxidase (deaminating) 387 650066484 299 35 169 287 3 122 7.0e-24 104 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650066485 432 41.72 3 431 5 439 0.0e+00 482 COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase 442 650066488 435 26.84 104 435 2 334 4.0e-34 139 COG0642 Signal transduction histidine kinase 336 650066489 336 37.42 6 329 3 314 6.0e-68 251 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650066490 278 33.1 1 278 11 288 2.0e-46 179 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650066491 304 42.47 1 288 28 312 2.0e-84 305 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 316 650066495 221 34.11 2 214 1 211 3.0e-38 152 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650066496 665 36.22 295 664 31 408 2.0e-52 200 COG0840 Methyl-accepting chemotaxis protein 408 650066497 292 32.43 175 285 16 126 8.0e-21 94.5 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650066498 499 35.24 1 443 2 442 1.0e-116 413 COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase 442 650066499 372 67.12 1 370 1 370 0.0e+00 523 COG0686 Alanine dehydrogenase 371 650066500 230 39.17 1 226 3 242 4.0e-58 217 COG1187 16S rRNA U516 pseudouridylate synthase RsuA and related 23S rRNA U2605, pseudouridylate synthases 248 650066501 186 39.44 1 180 1 179 5.0e-42 164 COG4474 Uncharacterized SPBc2 prophage-derived protein YoqJ 180 650066504 178 31.29 17 176 17 179 2.0e-26 112 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650066506 171 25.83 4 154 2 151 2.0e-19 89.2 COG3663 G:T/U-mismatch repair DNA glycosylase 169 650066507 284 43.31 1 281 3 270 7.0e-83 300 COG2107 Predicted periplasmic solute-binding protein 272 650066508 238 22.41 40 213 34 206 5.0e-14 71.6 COG0775 Nucleoside phosphorylase 234 650066509 199 22.68 1 192 3 195 1.0e-10 59.7 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650066511 335 29.43 40 335 31 318 8.0e-43 167 COG1879 ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain 322 650066512 644 28.29 127 628 13 452 1.0e-59 224 COG2972 Sensor histidine kinase YesM 456 650066514 361 44.03 10 361 3 341 3.0e-108 385 COG4213 ABC-type xylose transport system, periplasmic component 341 650066515 510 48.32 1 505 4 498 0.0e+00 616 COG1129 ABC-type sugar transport system, ATPase component 500 650066517 292 25.76 1 288 1 293 3.0e-38 152 COG1131 ABC-type multidrug transport system, ATPase component 293 650066518 128 32.74 8 120 8 119 5.0e-20 90.3 COG1725 DNA-binding transcriptional regulator YhcF, GntR family 125 650066521 289 39.64 9 288 1 279 2.0e-56 212 COG1737 DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains 281 650066522 320 33.65 1 311 5 309 5.0e-57 215 COG1940 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 314 650066523 426 23.86 1 426 1 433 6.0e-38 152 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066524 309 39.87 10 307 1 295 2.0e-57 216 COG1175 ABC-type sugar transport system, permease component 295 650066525 277 44.64 1 277 3 281 2.0e-59 222 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066526 225 51.85 6 221 16 229 2.0e-62 232 COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 229 650066528 357 53.28 1 351 35 384 0.0e+00 475 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 388 650066529 307 27.72 5 302 4 306 7.0e-22 98.1 COG0679 Predicted permease 311 650066530 239 38.89 1 226 2 232 3.0e-45 175 COG4221 NADP-dependent 3-hydroxy acid dehydrogenase YdfG 246 650066532 239 50 71 225 1 156 1.0e-46 179 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 158 650066537 485 34.36 3 479 9 527 2.0e-103 370 COG0659 Sulfate permease or related transporter, MFS superfamily 554 650066538 635 24.33 310 635 1 336 1.0e-35 144 COG0642 Signal transduction histidine kinase 336 650066539 621 23.56 300 619 1 330 5.0e-34 139 COG0642 Signal transduction histidine kinase 336 650066545 480 44.61 7 474 7 478 6.0e-122 431 COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains 574 650066546 157 42.31 1 156 1 156 3.0e-39 154 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) 156 650066548 165 59.06 4 152 1 149 9.0e-56 209 COG0780 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily 149 650066549 224 28.64 1 220 18 212 1.0e-41 163 COG0602 Organic radical activating enzyme 212 650066550 206 41.67 35 127 5 99 1.0e-18 86.5 COG0720 6-pyruvoyl-tetrahydropterin synthase 127 650066551 225 46.76 3 213 1 213 4.0e-76 277 COG0603 7-cyano-7-deazaguanine synthase (queuosine biosynthesis) 222 650066560 593 31.94 26 326 42 326 1.0e-26 114 COG3344 Retron-type reverse transcriptase 328 650066564 381 25.94 4 381 1 377 3.0e-34 139 COG0438 Glycosyltransferase involved in cell wall bisynthesis 381 650066568 253 29.55 5 239 5 248 1.0e-32 133 COG1216 Glycosyltransferase, GT2 family 305 650066569 243 50 1 235 1 232 3.0e-71 261 COG1209 dTDP-glucose pyrophosphorylase 286 650066575 365 27.74 87 361 77 361 2.0e-29 123 COG4641 Spore maturation protein CgeB 373 650066576 374 27.99 103 372 77 359 7.0e-30 125 COG4641 Spore maturation protein CgeB 373 650066577 466 19.53 6 384 1 370 5.0e-18 86.2 COG0438 Glycosyltransferase involved in cell wall bisynthesis 381 650066578 364 33.97 1 357 4 369 2.0e-80 293 COG0381 UDP-N-acetylglucosamine 2-epimerase 383 650066580 319 27.62 10 311 2 309 9.0e-29 120 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650066582 395 43.86 14 395 7 379 6.0e-108 384 COG1820 N-acetylglucosamine-6-phosphate deacetylase 380 650066583 242 38.71 1 241 1 236 9.0e-58 216 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 238 650066584 291 34.97 1 286 2 281 3.0e-59 222 COG1737 DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains 281 650066589 439 23.82 4 437 3 428 2.0e-35 144 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066590 293 35.86 1 288 2 291 2.0e-55 209 COG1175 ABC-type sugar transport system, permease component 295 650066591 294 42.6 20 293 5 281 2.0e-56 213 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066594 83 41.79 10 76 3 69 2.0e-11 60.6 COG1918 Fe2+ transport system protein FeoA 75 650066595 101 41.24 6 101 4 100 2.0e-09 54 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650066596 576 42.56 1 567 1 498 0.0e+00 531 COG0442 Prolyl-tRNA synthetase 500 650066597 297 33.21 20 296 2 281 3.0e-49 188 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066598 294 38.1 1 293 2 293 5.0e-57 214 COG1175 ABC-type sugar transport system, permease component 295 650066604 465 30.49 100 463 112 453 6.0e-52 198 COG2972 Sensor histidine kinase YesM 456 650066607 299 23.58 4 247 33 246 8.0e-15 74.5 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650066609 393 56.91 1 360 1 361 0.0e+00 497 COG0448 ADP-glucose pyrophosphorylase 393 650066610 367 34.16 1 354 3 363 7.0e-85 307 COG0448 ADP-glucose pyrophosphorylase 393 650066613 187 33.75 16 167 1 160 2.0e-37 149 COG1267 Phosphatidylglycerophosphatase A 160 650066614 352 26.04 65 348 10 246 9.0e-21 94.6 COG5401 Spore germination protein GerM 250 650066615 252 55.88 1 237 8 230 3.0e-74 271 COG0689 Ribonuclease PH 230 650066616 210 49.01 8 209 3 193 7.0e-58 217 COG0127 Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family 194 650066617 614 37.04 1 573 1 516 6.0e-120 425 COG0367 Asparagine synthetase B (glutamine-hydrolyzing) 542 650066626 254 26.98 6 184 3 185 6.0e-15 75 COG4106 Trans-aconitate methyltransferase 257 650066627 142 50 1 142 1 140 2.0e-25 108 COG2510 Uncharacterized membrane protein 140 650066628 155 23.97 1 131 12 156 1.0e-06 45.8 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650066631 442 47.52 1 442 1 439 1.0e-96 347 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 441 650066632 196 73.06 1 193 1 193 5.0e-83 300 COG0740 ATP-dependent protease ClpP, protease subunit 200 650066633 421 71.08 14 419 1 408 0.0e+00 683 COG1219 ATP-dependent protease Clp, ATPase subunit 408 650066634 369 59.5 4 360 3 360 0.0e+00 497 COG0821 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG/GcpE 361 650066635 588 24.82 7 492 19 562 1.0e-86 314 COG1067 Predicted ATP-dependent protease 647 650066636 778 63.54 10 774 9 776 0.0e+00 1131 COG0466 ATP-dependent Lon protease, bacterial type 782 650066637 214 49.49 1 196 2 199 4.0e-65 240 COG0218 GTP-binding protein EngB required for normal cell division 200 650066639 132 40.65 5 127 13 135 7.0e-36 142 COG1586 S-adenosylmethionine decarboxylase or arginine decarboxylase 136 650066640 468 46.68 1 422 1 414 1.0e-126 446 COG0373 Glutamyl-tRNA reductase 414 650066641 264 18.81 49 263 38 253 3.0e-07 49.4 COG4137 ABC-type uncharacterized transport system, permease component 265 650066642 218 36.32 5 205 2 201 1.0e-41 162 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 210 650066643 318 54.86 1 317 1 306 6.0e-110 390 COG0181 Porphobilinogen deaminase 307 650066644 518 52.23 1 247 2 244 1.0e-85 310 COG0007 Uroporphyrinogen-III methylase (siroheme synthase) 244 650066645 333 62.28 1 332 3 329 0.0e+00 525 COG0113 Delta-aminolevulinic acid dehydratase, porphobilinogen synthase 330 650066646 431 65.72 11 431 7 429 0.0e+00 640 COG0001 Glutamate-1-semialdehyde aminotransferase 432 650066647 300 41.35 60 287 55 289 2.0e-54 206 COG0564 Pseudouridylate synthase, 23S rRNA- or tRNA-specific 289 650066649 889 56.63 12 889 1 877 0.0e+00 1252 COG0525 Valyl-tRNA synthetase 877 650066650 467 38.96 23 459 2 423 9.0e-106 377 COG0285 Folylpolyglutamate synthase/Dihydropteroate synthase 427 650066651 458 49.67 1 452 4 455 0.0e+00 508 COG0773 UDP-N-acetylmuramate-alanine ligase 459 650066654 203 50 6 201 2 193 6.0e-56 210 COG0424 Predicted house-cleaning NTP pyrophosphatase, Maf/HAM1 superfamily 193 650066655 229 53.12 6 229 1 224 3.0e-72 264 COG2003 DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif 224 650066656 291 30.47 10 288 6 272 9.0e-47 180 COG1792 Cell shape-determining protein MreC 284 650066657 174 26.25 9 167 10 167 5.0e-09 54 COG2891 Cell shape-determining protein MreD 167 650066658 220 27.98 8 205 1 218 2.0e-26 113 COG0850 Septum formation inhibitor MinC 219 650066659 264 59.78 1 262 1 271 4.0e-107 380 COG2894 Septum formation inhibitor-activating ATPase MinD 272 650066661 287 23.32 13 193 30 215 2.0e-07 50.4 COG1994 Zn-dependent protease (includes SpoIVFB) 230 650066662 396 42.17 2 395 16 408 4.0e-95 341 COG1530 Ribonuclease G or E 487 650066663 103 60.19 1 103 1 103 9.0e-32 128 COG0261 Ribosomal protein L21 103 650066664 110 40.74 1 107 1 106 1.0e-19 88.4 COG2868 Uncharacterized conserved protein YsxB, DUF464 family 109 650066665 103 71.43 9 92 1 84 2.0e-33 133 COG0211 Ribosomal protein L27 87 650066668 436 51.76 1 369 2 369 0.0e+00 500 COG0536 GTPase involved in cell partioning and DNA repair 369 650066669 443 25.64 4 346 12 344 5.0e-41 162 COG4260 Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain 345 650066677 428 46.85 1 324 1 333 5.0e-102 364 COG0460 Homoserine dehydrogenase 333 650066678 357 49.85 1 332 49 385 8.0e-103 367 COG0498 Threonine synthase 411 650066679 323 41.41 7 302 4 294 3.0e-78 285 COG0083 Homoserine kinase 299 650066680 295 39.86 1 285 2 275 7.0e-69 254 COG0077 Prephenate dehydratase 279 650066681 294 40.35 3 284 1 280 1.0e-68 253 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 284 650066690 167 49.01 4 154 1 150 3.0e-52 197 COG0817 Holliday junction resolvasome RuvABC endonuclease subunit 160 650066691 178 38.64 2 175 29 200 8.0e-42 163 COG0632 Holliday junction resolvasome RuvABC DNA-binding subunit 201 650066692 335 71.08 2 333 1 332 0.0e+00 548 COG2255 Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit 332 650066694 343 63.4 1 343 1 343 0.0e+00 525 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 348 650066695 379 62.43 10 371 2 363 0.0e+00 568 COG0343 Queuine/archaeosine tRNA-ribosyltransferase 372 650066696 116 48.19 27 109 4 86 5.0e-23 99.5 COG1862 Preprotein translocase subunit YajC 97 650066698 265 35.09 1 265 1 224 1.0e-48 186 COG2323 Uncharacterized membrane protein YcaP, DUF421 family 224 650066699 534 22.87 1 513 3 477 3.0e-19 90.5 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 480 650066701 416 35.01 15 404 90 505 9.0e-80 291 COG0342 Preprotein translocase subunit SecD 506 650066702 305 40.86 4 300 8 305 2.0e-67 249 COG0341 Preprotein translocase subunit SecF 305 650066703 321 29.9 1 307 3 298 2.0e-36 146 COG0053 Divalent metal cation (Fe/Co/Zn/Cd) transporter 304 650066705 171 51.45 1 171 6 178 1.0e-42 166 COG0503 Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein 179 650066706 432 40.05 7 415 9 439 2.0e-80 293 COG2233 Xanthine/uracil permease 451 650066707 725 52.49 1 723 7 701 0.0e+00 924 COG0317 (p)ppGpp synthase/hydrolase, HD superfamily 701 650066708 147 66.9 1 145 1 145 2.0e-61 228 COG1490 D-Tyr-tRNAtyr deacylase 145 650066710 168 47.51 1 168 2 182 6.0e-33 133 COG0693 Putative intracellular protease/amidase 188 650066712 591 63.42 2 586 1 585 0.0e+00 931 COG0173 Aspartyl-tRNA synthetase 585 650066713 251 49.6 1 246 9 258 5.0e-88 317 COG1179 tRNA A37 threonylcarbamoyladenosine dehydratase 263 650066715 435 49.41 17 434 14 430 0.0e+00 485 COG2256 Replication-associated recombination protein RarA (DNA-dependent ATPase) 436 650066717 742 30.5 2 742 4 699 0.0e+00 476 COG1328 Anaerobic ribonucleoside-triphosphate reductase 700 650066718 167 31.85 9 153 11 167 6.0e-18 83.9 COG0602 Organic radical activating enzyme 212 650066719 139 39.04 1 139 1 146 2.0e-34 138 COG1959 DNA-binding transcriptional regulator, IscR family 150 650066722 381 51.84 4 381 3 380 0.0e+00 484 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme 386 650066723 173 27.39 2 157 3 151 1.0e-17 83.1 COG3881 Uncharacterized protein YrrD, contains PRC-barrel domain 176 650066725 355 34.59 8 349 1 344 1.0e-40 160 COG0628 Predicted PurR-regulated permease PerM 355 650066726 875 55.73 1 873 6 877 0.0e+00 1163 COG0013 Alanyl-tRNA synthetase 879 650066727 86 59.3 1 86 1 85 6.0e-27 112 COG4472 Uncharacterized protein, UPF0297 family 88 650066728 137 52.9 1 137 1 138 1.0e-40 158 COG0816 RNase H-fold protein, predicted Holliday junction resolvase in Firmicutes and mycoplasms, involved in anti-termination at Rho-dependent terminators 141 650066729 100 36.46 8 97 9 104 5.0e-04 36.1 COG3906 Uncharacterized protein YrzB, UPF0473 family 105 650066731 347 37.75 1 343 9 338 2.0e-79 289 COG1559 Cell division protein YceG, involved in septum cleavage 342 650066732 310 35.6 4 310 6 307 1.0e-61 230 COG0826 Collagenase-like protease, PrtC family 347 650066733 448 42.97 13 394 1 347 4.0e-97 348 COG0826 Collagenase-like protease, PrtC family 347 650066734 765 22.94 363 750 37 407 3.0e-35 144 COG0840 Methyl-accepting chemotaxis protein 408 650066735 598 28.81 2 582 10 584 2.0e-74 273 COG0768 Cell division protein FtsI/penicillin-binding protein 2 599 650066736 389 26.39 15 354 16 346 2.0e-26 113 COG0628 Predicted PurR-regulated permease PerM 355 650066737 461 33.02 31 239 58 266 2.0e-31 130 COG0726 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family 267 650066738 557 59.72 1 557 11 572 0.0e+00 782 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 575 650066741 255 26.25 14 251 5 213 5.0e-24 104 COG0546 Phosphoglycolate phosphatase, HAD superfamily 220 650066742 250 40.41 6 244 1 241 2.0e-65 242 COG0846 NAD-dependent protein deacetylase, SIR2 family 250 650066743 341 41.67 13 332 1 312 2.0e-80 292 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650066744 289 36.72 158 285 1 127 4.0e-22 98.8 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650066745 386 48.83 1 382 3 383 2.0e-117 415 COG0153 Galactokinase 390 650066746 329 55.62 1 326 1 329 0.0e+00 512 COG1087 UDP-glucose 4-epimerase 329 650066747 510 54.37 2 504 10 501 0.0e+00 629 COG4468 Galactose-1-phosphate uridylyltransferase 503 650066748 387 50.13 1 387 1 384 0.0e+00 529 COG1979 Alcohol dehydrogenase YqhD, Fe-dependent ADH family 384 650066750 511 36.19 1 475 8 528 7.0e-65 241 COG2268 Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain 548 650066752 693 39.13 1 422 1 393 9.0e-81 295 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 393 650066753 91 40.23 2 88 3 88 6.0e-18 82.2 COG1925 Phosphotransferase system, HPr and related phosphotransfer proteins 88 650066754 573 60.53 4 566 3 567 0.0e+00 810 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 574 650066755 791 30.38 23 678 65 691 2.0e-116 413 COG1523 Pullulanase/glycogen debranching enzyme 697 650066756 208 39.13 8 96 3 93 2.0e-16 79.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) 93 650066757 293 33.33 52 285 26 271 4.0e-33 135 COG0834 ABC-type amino acid transport/signal transduction system, periplasmic component/domain 275 650066758 250 39.92 4 247 1 250 2.0e-47 182 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650066759 249 41.2 1 247 1 248 2.0e-52 199 COG1349 DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family 253 650066760 277 58.27 1 277 1 278 1.0e-113 403 COG3717 5-keto 4-deoxyuronate isomerase 278 650066761 299 42.91 49 288 7 250 7.0e-53 200 COG0584 Glycerophosphoryl diester phosphodiesterase 257 650066762 419 39.13 40 399 1 366 3.0e-72 265 COG0683 ABC-type branched-chain amino acid transport system, periplasmic component 366 650066763 301 39.2 1 299 3 296 6.0e-53 201 COG0559 Branched-chain amino acid ABC-type transport system, permease component 297 650066764 279 54.84 24 271 2 249 8.0e-92 330 COG4674 ABC-type uncharacterized transport system, ATPase component 249 650066765 231 45.53 1 231 3 237 4.0e-75 274 COG0410 ABC-type branched-chain amino acid transport system, ATPase component 237 650066766 495 65.05 1 495 2 496 0.0e+00 741 COG2160 L-arabinose isomerase 497 650066767 401 32.44 36 362 4 331 1.0e-55 210 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650066768 229 39.74 1 229 4 219 1.0e-61 229 COG0235 Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase 219 650066769 556 39.96 3 553 2 541 0.0e+00 572 COG1069 Ribulose kinase 544 650066771 331 34.34 27 320 68 337 8.0e-57 214 COG0371 Glycerol dehydrogenase or related enzyme, iron-containing ADH family 360 650066773 305 42.76 2 302 5 308 7.0e-93 333 COG4189 Predicted transcriptional regulator 308 650066774 499 54.2 1 499 2 501 0.0e+00 689 COG3534 Alpha-L-arabinofuranosidase 501 650066775 442 23.23 1 442 1 431 1.0e-36 148 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066776 297 35.14 3 296 2 293 5.0e-48 185 COG1175 ABC-type sugar transport system, permease component 295 650066777 277 37.77 2 276 5 281 5.0e-50 191 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066779 289 29.04 25 288 16 276 1.0e-20 94.1 COG1284 Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains 289 650066780 414 30.73 1 379 4 381 7.0e-36 144 COG0475 Kef-type K+ transport system, membrane component KefB 397 650066781 163 49.69 1 163 1 162 8.0e-42 163 COG0490 K+/H+ antiporter YhaU, regulatory subunit KhtT 162 650066787 612 30.2 201 604 87 454 1.0e-44 175 COG2972 Sensor histidine kinase YesM 456 650066791 283 49.82 1 283 27 309 5.0e-90 324 COG4209 ABC-type polysaccharide transport system, permease component 309 650066792 305 29.41 22 304 6 281 7.0e-45 174 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066793 512 22.84 71 415 46 393 5.0e-19 89.7 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066794 1551 19.25 521 908 50 383 4.0e-12 68.5 COG1649 Uncharacterized lipoprotein YddW, UPF0748 family 418 650066798 233 27.83 28 233 17 222 7.0e-29 120 COG2091 Phosphopantetheinyl transferase 223 650066801 509 21.34 1 415 1 391 2.0e-24 107 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066802 512 20.73 2 380 1 349 8.0e-24 105 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650066803 319 53.57 12 319 2 309 5.0e-107 381 COG4209 ABC-type polysaccharide transport system, permease component 309 650066804 292 30.03 5 291 3 281 5.0e-48 184 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650066805 475 28.63 7 471 23 547 4.0e-61 229 COG3507 Beta-xylosidase 549 650066807 105 36.36 5 98 21 119 4.0e-11 59.4 COG1917 Cupin domain protein related to quercetin dioxygenase 131 650066809 353 22.18 74 316 8 224 2.0e-11 63.9 COG0412 Dienelactone hydrolase 236 650066810 233 36.25 28 231 3 247 1.0e-37 150 COG1191 DNA-directed RNA polymerase specialized sigma subunit 247 650066811 477 21.7 37 476 2 413 9.0e-36 145 COG3395 Uncharacterized conserved protein YgbK, DUF1537 family 413 650066812 340 36.39 3 333 106 441 7.0e-47 181 COG2610 H+/gluconate symporter or related permease 442 650066814 297 47.9 1 285 1 286 7.0e-81 294 COG2084 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase 286 650066815 207 37.21 1 204 9 223 1.0e-31 129 COG1802 DNA-binding transcriptional regulator, GntR family 230 650066819 267 40.07 2 264 55 318 1.0e-58 220 COG3458 Cephalosporin-C deacetylase or related acetyl esterase 321 650066820 123 18.42 3 114 4 117 8.0e-03 32.6 COG5609 Uncharacterized protein YbcI 124 650066821 259 48.63 2 256 1 248 2.0e-85 309 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 248 650066822 293 30.47 38 293 2 257 2.0e-43 169 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 258 650066823 335 25.47 21 335 20 330 1.0e-23 103 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component 335 650066824 220 33.66 11 200 4 202 4.0e-31 128 COG1335 Nicotinamidase-related amidase 205 650066825 479 22.83 23 364 16 383 2.0e-18 87.2 COG2814 Predicted arabinose efflux permease, MFS family 394 650066826 357 46.76 3 354 2 355 2.0e-112 399 COG1363 Putative aminopeptidase FrvX 355 650066831 318 44 1 314 5 329 4.0e-72 265 COG0714 MoxR-like ATPase 329 650066832 415 21.77 16 411 7 408 3.0e-28 119 COG1721 Uncharacterized conserved protein, DUF58 family, contains vWF domain 416 650066833 176 45.78 1 166 2 165 7.0e-44 170 COG2179 Predicted phosphohydrolase YqeG, HAD superfamily 175 650066834 374 29.71 41 374 1 322 5.0e-47 181 COG1161 Ribosome biogenesis GTPase A 322 650066835 286 45.39 7 286 2 283 4.0e-83 301 COG0169 Shikimate 5-dehydrogenase 283 650066836 96 62.5 1 96 1 96 9.0e-28 114 COG1534 RNA-binding protein YhbY 97 650066837 196 41.75 1 192 3 195 2.0e-51 195 COG1057 Nicotinic acid mononucleotide adenylyltransferase 197 650066838 192 43.85 3 189 1 187 7.0e-49 186 COG1713 HD superfamily phosphohydrolase YqeK (fused to NMNAT in mycoplasms) 187 650066839 115 50 6 113 4 111 4.0e-33 133 COG0799 Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits 115 650066840 291 42.18 1 272 1 268 1.0e-62 233 COG2996 Predicted RNA-binding protein, contains S1 domains, virulence factor B family 287 650066842 288 20.96 1 262 3 253 5.0e-20 91.8 COG1082 Sugar phosphate isomerase/epimerase 274 650066843 389 28.93 1 352 1 342 3.0e-50 192 COG0673 Predicted dehydrogenase 342 650066844 361 26.09 44 361 26 340 8.0e-25 108 COG0673 Predicted dehydrogenase 342 650066845 294 35.9 171 287 6 121 1.0e-19 90.7 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650066847 280 34.09 1 262 2 262 2.0e-53 202 COG0345 Pyrroline-5-carboxylate reductase 266 650066849 172 37.82 7 158 6 152 7.0e-34 136 COG2131 Deoxycytidylate deaminase 164 650066850 884 33.45 595 881 46 285 9.0e-48 185 COG2333 Metal-dependent hydrolase, beta-lactamase superfamily II 293 650066851 181 32.2 1 173 1 177 2.0e-32 132 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650066853 90 60.23 1 88 1 88 8.0e-10 55.3 COG0268 Ribosomal protein S20 88 650066856 604 71.5 5 604 3 602 0.0e+00 1093 COG0481 Translation elongation factor EF-4, membrane-bound GTPase 603 650066857 388 43.27 10 385 36 413 8.0e-110 390 COG0635 Coproporphyrinogen III oxidase or related Fe-S oxidoreductase 416 650066858 153 35.57 6 152 4 152 3.0e-29 121 COG1246 N-acetylglutamate synthase or related acetyltransferase, GNAT family 153 650066859 344 40.41 1 344 3 345 1.0e-92 333 COG1420 Transcriptional regulator of heat shock response 346 650066860 511 28.96 17 505 12 512 3.0e-62 233 COG0459 Chaperonin GroEL (HSP60 family) 524 650066861 198 42.33 10 197 5 190 1.0e-37 149 COG0576 Molecular chaperone GrpE (heat shock protein) 193 650066862 612 64.09 1 576 4 579 0.0e+00 680 COG0443 Molecular chaperone DnaK (HSP70) 579 650066863 372 59.68 4 371 3 371 0.0e+00 485 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 371 650066866 325 40.62 1 325 2 300 5.0e-78 284 COG2264 Ribosomal protein L11 methylase PrmA 300 650066867 230 32.18 20 209 21 210 1.0e-14 73.5 COG1994 Zn-dependent protease (includes SpoIVFB) 230 650066868 256 41.27 1 252 3 246 3.0e-58 219 COG1385 16S rRNA U1498 N3-methylase RsmE 246 650066869 447 39.41 1 435 2 436 0.0e+00 478 COG0621 tRNA A37 methylthiotransferase MiaB 437 650066872 457 39.43 4 452 1 393 4.0e-98 351 COG1092 23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI 393 650066874 1176 36.09 1 1174 1 1108 0.0e+00 850 COG3857 ATP-dependent helicase/DNAse subunit B 1108 650066875 392 27.79 1 387 1 390 2.0e-43 170 COG0420 DNA repair exonuclease SbcCD nuclease subunit 390 650066876 1151 22.63 1 813 1 779 2.0e-28 121 COG0419 DNA repair exonuclease SbcCD ATPase subunit 908 650066877 119 38.39 1 110 1 109 4.0e-26 109 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase 138 650066879 146 53.06 1 146 1 147 1.0e-37 148 COG1610 Uncharacterized conserved protein YqeY 148 650066880 453 31.03 33 451 19 431 4.0e-68 252 COG1030 Membrane-bound serine protease (ClpP class) 436 650066881 335 74.54 6 331 2 327 2.0e-130 459 COG4864 Uncharacterized protein YqfA, UPF0365 family 328 650066885 323 51.83 1 323 9 336 2.0e-103 369 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 348 650066886 760 38.4 10 738 1 697 0.0e+00 544 COG1480 Membrane-associated HD superfamily phosphohydrolase 700 650066887 165 39.24 8 165 6 148 3.0e-32 131 COG0319 ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme 153 650066888 127 47.32 8 119 11 122 8.0e-24 102 COG0818 Diacylglycerol kinase 123 650066889 137 50.75 1 134 3 134 6.0e-41 159 COG0295 Cytidine deaminase 134 650066891 262 34.14 11 257 3 243 1.0e-46 180 COG1381 Recombinational DNA repair protein (RecF pathway) 251 650066892 295 71.67 1 289 5 297 0.0e+00 547 COG0752 Glycyl-tRNA synthetase, alpha subunit 298 650066893 157 37.41 7 153 2 148 4.0e-38 150 COG1671 Uncharacterized conserved protein YaiI, UPF0178 family 150 650066894 605 33.62 8 584 2 555 3.0e-108 386 COG0358 DNA primase (bacterial type) 568 650066895 376 54.81 41 376 1 342 1.0e-95 343 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 342 650066896 242 41.88 2 234 12 225 5.0e-53 200 COG2384 tRNA A22 N-methylase 226 650066905 386 49.21 1 378 2 381 8.0e-129 453 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase or related enzyme 386 650066906 412 45.93 3 381 2 379 6.0e-116 411 COG0301 Adenylyl- and sulfurtransferase ThiI, participates in tRNA 4-thiouridine and thiamine biosynthesis 383 650066909 220 25.75 2 213 15 246 3.0e-24 105 COG0861 Membrane protein TerC, possibly involved in tellurium resistance 254 650066911 613 67.22 4 604 2 601 0.0e+00 1012 COG1217 Predicted membrane GTPase involved in stress response 603 650066913 365 25.69 27 348 1 291 8.0e-36 144 COG1316 Anionic cell wall polymer biosynthesis enzyme, LytR-Cps2A-Psr (LCP) family 307 650066916 443 55.38 1 443 1 436 0.0e+00 527 COG1875 Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains 436 650066917 420 20.58 66 352 52 349 4.0e-12 66.1 COG2182 Maltose-binding periplasmic protein MalE 420 650066920 321 33.96 3 319 1 299 4.0e-54 205 COG1893 Ketopantoate reductase 307 650066922 552 33.04 1 546 3 553 5.0e-112 398 COG4166 ABC-type oligopeptide transport system, periplasmic component 562 650066923 310 40.25 1 306 1 317 2.0e-75 276 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650066924 316 48.94 37 316 7 288 5.0e-80 291 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650066925 300 60.81 4 298 1 292 3.0e-126 444 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 316 650066927 543 32.58 12 541 12 535 6.0e-92 331 COG4365 Uncharacterized protein YllA, UPF0747 family 537 650066928 422 55.34 11 421 7 418 0.0e+00 582 COG0499 S-adenosylhomocysteine hydrolase 420 650066929 145 47.95 1 143 1 146 3.0e-52 197 COG2001 MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity 146 650066930 317 53.31 1 317 4 312 6.0e-124 437 COG0275 16S rRNA C1402 N4-methylase RsmH 314 650066931 138 29.2 7 116 3 114 3.0e-05 41.1 COG4839 Cell division protein FtsL 120 650066932 647 40 1 569 6 599 0.0e+00 465 COG0768 Cell division protein FtsI/penicillin-binding protein 2 599 650066933 495 47.08 22 493 9 475 0.0e+00 475 COG0769 UDP-N-acetylmuramyl tripeptide synthase 475 650066934 472 46.3 5 462 4 450 2.0e-128 452 COG0770 UDP-N-acetylmuramyl pentapeptide synthase 451 650066935 321 41.36 5 321 4 316 1.0e-53 203 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 319 650066936 479 43.63 3 479 1 446 4.0e-129 455 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 448 650066937 365 47.92 9 365 15 373 8.0e-83 300 COG0772 Bacterial cell division protein FtsW, lipid II flippase 381 650066940 301 45.94 19 300 6 288 4.0e-87 314 COG0812 UDP-N-acetylenolpyruvoylglucosamine reductase 291 650066941 427 55.5 1 415 1 417 0.0e+00 537 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 421 650066942 256 19.77 1 254 13 265 5.0e-19 88.2 COG1589 Cell division septal protein FtsQ 269 650066943 427 43.09 1 427 2 418 2.0e-107 382 COG0849 Cell division ATPase FtsA 418 650066944 375 59.29 1 338 1 338 8.0e-106 377 COG0206 Cell division GTPase FtsZ 338 650066946 240 37.85 35 238 1 246 2.0e-39 156 COG1191 DNA-directed RNA polymerase specialized sigma subunit 247 650066947 260 38.96 14 259 1 245 2.0e-57 216 COG1191 DNA-directed RNA polymerase specialized sigma subunit 247 650066948 113 31.76 7 91 1 84 4.0e-12 63.3 COG1873 Sporulation protein YlmC, PRC-barrel domain family 87 650066949 285 42.97 29 284 14 249 1.0e-60 226 COG1496 Copper oxidase (laccase) domain 249 650066950 229 45.65 1 228 1 227 7.0e-72 263 COG0325 Uncharacterized pyridoxal phosphate-containing protein, affects Ilv metabolism, UPF0001 family 228 650066953 89 37.21 4 89 10 94 2.0e-05 40.9 COG0762 Uncharacterized conserved protein YggT, Ycf19 family 96 650066954 260 40.23 4 259 3 256 2.0e-66 245 COG2302 RNA-binding protein YlmH, contains S4-like domain 257 650066956 246 33.91 4 118 1 106 4.0e-15 75.1 COG1734 RNA polymerase-binding transcription factor DksA 120 650066958 166 45.45 1 152 11 163 2.0e-34 138 COG0597 Lipoprotein signal peptidase 167 650066959 323 51.7 24 311 3 289 2.0e-88 319 COG0564 Pseudouridylate synthase, 23S rRNA- or tRNA-specific 289 650066961 527 39.55 1 525 1 512 0.0e+00 470 COG0488 ATPase components of ABC transporters with duplicated ATPase domains 530 650066963 415 31.3 29 409 10 393 2.0e-81 296 COG0436 Aspartate/methionine/tyrosine aminotransferase 393 650066964 186 58.79 3 184 1 179 4.0e-60 224 COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 179 650066965 303 46.79 6 303 4 313 5.0e-97 347 COG0540 Aspartate carbamoyltransferase, catalytic chain 316 650066966 1068 68.19 13 405 1 392 0.0e+00 581 COG0458 Carbamoylphosphate synthase large subunit 400 650066967 247 44.26 1 244 1 234 2.0e-55 209 COG0284 Orotidine-5'-phosphate decarboxylase 240 650066968 213 37.62 9 208 4 200 3.0e-46 178 COG0461 Orotate phosphoribosyltransferase 201 650066969 305 33.67 1 292 2 288 3.0e-62 232 COG1131 ABC-type multidrug transport system, ATPase component 293 650066971 194 23.03 2 165 11 175 6.0e-11 60.8 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650066977 90 26.67 1 90 1 90 2.0e-05 40.3 COG4842 Uncharacterized conserved protein YukE 97 650066989 401 23.41 6 396 10 394 2.0e-25 110 COG2814 Predicted arabinose efflux permease, MFS family 394 650066990 205 22.11 1 196 3 201 5.0e-13 67.8 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650066991 257 41.26 51 251 61 265 3.0e-41 162 COG0726 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family 267 650066994 230 58.11 3 222 2 223 2.0e-92 331 COG0692 Uracil DNA glycosylase 223 650066996 358 30.92 13 357 9 351 6.0e-38 151 COG0628 Predicted PurR-regulated permease PerM 355 650066999 492 22.88 5 351 1 337 2.0e-20 93.9 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067000 305 33.22 18 304 10 281 7.0e-48 184 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067001 1040 34.63 234 1036 201 942 0.0e+00 523 COG0383 Alpha-mannosidase 943 650067002 439 54.35 17 430 7 419 0.0e+00 567 COG3538 Meiotically up-regulated gene 157 (Mug157) protein (function unknown) 434 650067004 911 32.49 6 908 5 943 0.0e+00 617 COG0383 Alpha-mannosidase 943 650067007 127 22.06 6 121 2 136 4.0e-07 47.1 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650067009 261 38.46 5 236 3 236 2.0e-61 229 COG1131 ABC-type multidrug transport system, ATPase component 293 650067012 268 26.96 1 267 117 405 7.0e-25 107 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase 409 650067014 272 39.53 1 258 1 258 8.0e-53 200 COG1177 ABC-type spermidine/putrescine transport system, permease component II 267 650067015 287 39.16 12 274 16 276 7.0e-48 184 COG1176 ABC-type spermidine/putrescine transport system, permease component I 287 650067016 366 47.77 7 363 6 352 6.0e-111 394 COG3842 ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components 352 650067017 366 23.13 63 366 1 298 9.0e-29 121 COG1840 ABC-type Fe3+ transport system, periplasmic component 299 650067018 251 34.96 6 249 1 246 2.0e-52 198 COG1414 DNA-binding transcriptional regulator, IclR family 246 650067020 182 24.03 6 151 3 156 4.0e-10 58 COG4512 Accessory gene regulator protein AgrB 198 650067036 147 32.62 10 147 14 152 4.0e-18 83.8 COG2153 Predicted N-acyltransferase, GNAT family 155 650067038 245 17.62 3 221 2 258 5.0e-14 71.6 COG1234 Ribonuclease BN, tRNA processing enzyme 292 650067041 491 35.61 2 486 5 545 0.0e+00 469 COG1982 Arginine/lysine/ornithine decarboxylase 557 650067042 207 48.54 1 206 1 206 8.0e-64 236 COG4493 Uncharacterized protein YktB, UPF0637 family 209 650067044 469 69.15 1 469 1 469 0.0e+00 815 COG0362 6-phosphogluconate dehydrogenase 473 650067046 170 41.67 4 170 1 168 3.0e-39 154 COG0703 Shikimate kinase 172 650067047 102 30.39 2 100 1 102 4.0e-17 79.6 COG0607 Rhodanese-related sulfurtransferase 110 650067048 430 39.53 1 426 3 428 4.0e-104 371 COG0128 5-enolpyruvylshikimate-3-phosphate synthase 428 650067049 140 62.12 3 132 1 132 3.0e-45 173 COG1832 Predicted CoA-binding protein 140 650067050 627 31.44 1 377 3 387 4.0e-54 206 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 393 650067051 587 48.68 1 569 2 569 0.0e+00 664 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 574 650067052 175 33.52 5 172 2 183 1.0e-25 109 COG0693 Putative intracellular protease/amidase 188 650067055 336 42.81 3 335 1 333 8.0e-96 343 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650067056 233 42.17 6 233 5 233 8.0e-53 200 COG0775 Nucleoside phosphorylase 234 650067058 417 38.73 17 417 6 401 1.0e-103 370 COG0162 Tyrosyl-tRNA synthetase 401 650067059 200 53.66 1 200 1 205 2.0e-57 215 COG0522 Ribosomal protein S4 or related protein 205 650067062 371 31.17 3 365 1 385 1.0e-80 293 COG2309 Leucyl aminopeptidase (aminopeptidase T) 385 650067063 80 29.23 10 73 22 86 1.0e-04 38.6 COG1925 Phosphotransferase system, HPr and related phosphotransfer proteins 88 650067064 95 64.1 13 90 11 88 2.0e-21 94.3 COG4838 Uncharacterized protein YlaN, UPF0358 family 92 650067065 357 37.14 9 355 18 365 6.0e-61 228 COG0387 Ca2+/H+ antiporter 368 650067066 128 46.34 1 122 1 123 3.0e-22 97.6 COG1302 Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family 131 650067067 405 42.82 14 393 15 381 7.0e-83 301 COG0772 Bacterial cell division protein FtsW, lipid II flippase 381 650067069 169 24.58 22 139 4 119 5.0e-07 47.3 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650067070 365 50.14 12 356 12 359 1.0e-110 393 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 392 650067071 576 36.74 172 574 6 424 1.0e-76 280 COG1061 Superfamily II DNA or RNA helicase 442 650067073 145 30.77 10 126 1 115 1.0e-12 65.7 COG3679 Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development) 118 650067074 87 36.47 1 85 2 85 3.0e-14 70.2 COG4471 Uncharacterized protein YlbG, UPF0298 family 90 650067076 298 33 1 298 1 292 6.0e-40 157 COG0583 DNA-binding transcriptional regulator, LysR family 297 650067077 289 39.04 8 256 2 247 1.0e-41 163 COG0613 Predicted metal-dependent phosphoesterase TrpH, contains PHP domain 258 650067078 929 45.83 1 902 18 904 0.0e+00 882 COG0474 Magnesium-transporting ATPase (P-type) 917 650067079 278 47.5 1 278 1 272 3.0e-85 308 COG0253 Diaminopimelate epimerase 272 650067080 623 39.22 3 287 6 311 8.0e-75 275 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain 311 650067081 295 37.37 1 295 1 290 9.0e-64 237 COG1561 Uncharacterized conserved protein YicC, UPF0701 family 290 650067082 86 86.05 1 86 1 86 3.0e-33 132 COG2052 Regulator of extracellular matrix RemA, YlzA/DUF370 family 89 650067083 190 54.26 1 188 1 187 9.0e-71 259 COG0194 Guanylate kinase 191 650067084 66 38.1 1 62 1 63 8.0e-10 55.3 COG1758 DNA-directed RNA polymerase, subunit K/omega 74 650067085 417 51.57 1 412 1 391 3.0e-112 398 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 392 650067086 844 48.48 219 843 133 730 0.0e+00 702 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 730 650067087 164 47.93 1 164 1 162 2.0e-47 181 COG0242 Peptide deformylase 168 650067088 313 52.9 1 310 2 307 2.0e-112 398 COG0223 Methionyl-tRNA formyltransferase 307 650067089 460 41.06 103 457 1 353 6.0e-99 354 COG0144 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family 355 650067090 346 48.99 2 344 1 345 1.0e-128 453 COG0820 Adenine C2-methylase RlmN of 23S rRNA A2503 and tRNA A37 349 650067091 258 40.94 1 252 7 259 1.0e-52 200 COG0631 Serine/threonine protein phosphatase PrpC 262 650067092 709 33.89 10 285 2 296 3.0e-46 180 COG0515 Serine/threonine protein kinase 384 650067093 219 61.29 1 217 3 217 5.0e-86 310 COG0036 Pentose-5-phosphate-3-epimerase 220 650067094 62 51.72 1 56 1 58 4.0e-12 63 COG0227 Ribosomal protein L28 77 650067095 592 46.27 2 591 1 542 0.0e+00 567 COG1461 Predicted kinase related to dihydroxyacetone kinase 542 650067096 285 46.21 3 279 2 275 8.0e-72 264 COG1307 Fatty acid-binding protein DegV (function unknown) 282 650067097 683 48.56 1 655 3 661 0.0e+00 797 COG1200 RecG-like helicase 677 650067100 233 46.72 1 227 1 220 3.0e-61 228 COG2135 Putative SOS response-associated peptidase YedK 226 650067101 433 52.78 1 431 9 435 8.0e-106 377 COG2252 Xanthine/uracil/vitamin C permease, AzgA family 436 650067103 206 35.33 27 205 9 190 1.0e-30 126 COG3554 Uncharacterized protein 190 650067104 149 28.7 32 146 13 127 1.0e-19 89.2 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650067106 303 19.54 39 299 32 290 8.0e-07 47.9 COG0697 Permease of the drug/metabolite transporter (DMT) superfamily 292 650067107 305 25.33 9 301 22 313 1.0e-29 123 COG1612 Heme A synthase 323 650067108 297 42.69 6 258 4 245 2.0e-62 232 COG1622 Heme/copper-type cytochrome/quinol oxidase, subunit 2 247 650067109 657 53.75 41 610 1 566 0.0e+00 616 COG0843 Heme/copper-type cytochrome/quinol oxidase, subunit 1 566 650067110 208 44.9 13 207 16 208 2.0e-45 175 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 209 650067111 107 40.59 2 100 1 101 2.0e-15 74.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 111 650067112 290 41.13 9 290 20 300 6.0e-74 270 COG0109 Polyprenyltransferase (heme O synthase) 304 650067115 186 31.02 1 177 10 193 1.0e-27 116 COG1999 Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family 207 650067116 173 27.69 38 152 5 133 3.0e-17 81.8 COG1225 Peroxiredoxin 157 650067117 151 27.71 1 145 5 170 1.0e-13 68.9 COG1495 Disulfide bond formation protein DsbB 170 650067118 49 61.22 1 49 2 50 1.0e-09 54.4 COG0267 Ribosomal protein L33 50 650067120 204 38.8 10 192 5 183 1.0e-34 139 COG3506 Regulation of enolase protein 1 (function unknown), concanavalin A-like superfamily 189 650067121 589 50 1 327 1 322 3.0e-93 336 COG2376 Dihydroxyacetone kinase 323 650067122 305 27.98 65 298 72 312 2.0e-28 120 COG0657 Acetyl esterase/lipase 312 650067127 325 27.25 1 324 2 342 1.0e-42 166 COG0673 Predicted dehydrogenase 342 650067130 326 21.26 16 304 5 279 3.0e-15 76 COG1940 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 314 650067131 626 23.71 257 601 2 310 5.0e-17 83.4 COG1482 Mannose-6-phosphate isomerase, class I 312 650067134 302 41 3 299 1 293 3.0e-85 308 COG1090 NAD dependent epimerase/dehydratase family enzyme 297 650067135 320 31.12 1 319 9 339 1.0e-40 160 COG0798 Arsenite efflux pump ArsB, ACR3 family 342 650067136 396 44.84 4 395 6 396 0.0e+00 482 COG4992 Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase 404 650067137 291 40.21 6 288 22 290 9.0e-56 210 COG0010 Arginase family enzyme 305 650067138 453 29.33 6 448 3 433 2.0e-53 203 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067140 274 40.79 2 273 5 281 1.0e-53 203 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067141 324 37.54 33 324 2 294 2.0e-62 233 COG1175 ABC-type sugar transport system, permease component 295 650067142 327 39.76 2 325 1 332 3.0e-80 292 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650067143 292 40.39 3 292 1 307 5.0e-55 208 COG0524 Sugar or nucleoside kinase, ribokinase family 311 650067144 115 50.85 1 114 18 135 3.0e-34 136 COG1869 D-ribose pyranose/furanose isomerase RbsD 135 650067145 493 54.27 3 492 9 500 0.0e+00 676 COG1129 ABC-type sugar transport system, ATPase component 500 650067146 322 51.6 13 321 2 310 4.0e-65 241 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component 316 650067147 358 30.88 10 351 6 339 7.0e-47 181 COG0673 Predicted dehydrogenase 342 650067149 540 23.51 2 528 3 474 8.0e-45 175 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650067150 284 41.75 1 284 25 309 1.0e-77 283 COG4209 ABC-type polysaccharide transport system, permease component 309 650067151 306 29.29 15 305 1 281 2.0e-43 169 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067152 539 20 63 397 34 351 2.0e-15 77.4 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067153 244 58.51 4 244 3 241 2.0e-89 321 COG4813 Trehalose utilization protein 261 650067154 351 27.45 1 351 1 342 1.0e-48 186 COG0673 Predicted dehydrogenase 342 650067156 584 46.44 62 580 4 485 0.0e+00 560 COG1492 Cobyric acid synthase 486 650067158 79 35.53 4 77 2 76 1.0e-10 58.1 COG0695 Glutaredoxin 80 650067161 399 26.43 15 394 7 381 1.0e-40 160 COG0754 Glutathionylspermidine synthase 387 650067163 130 26.89 9 127 17 129 2.0e-11 61.4 COG3766 Uncharacterized membrane protein YjfL, UPF0719 family 133 650067166 519 33.08 1 515 2 517 6.0e-107 381 COG1384 Lysyl-tRNA synthetase, class I 521 650067170 455 23.91 1 448 12 427 6.0e-37 148 COG1215 Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase 439 650067172 453 44.88 8 432 1 429 0.0e+00 479 COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 436 650067175 429 32.84 225 419 58 257 1.0e-33 137 COG0726 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family 267 650067176 437 38.13 3 431 1 432 2.0e-114 406 COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 436 650067179 496 22.57 66 488 5 438 2.0e-32 133 COG1215 Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase 439 650067181 715 29.24 5 696 1 763 2.0e-97 350 COG1511 Uncharacterized membrane protein YhgE, phage infection protein (PIP) family 780 650067185 301 52.56 1 155 19 174 1.0e-57 216 COG0225 Peptide methionine sulfoxide reductase MsrA 174 650067186 205 24.12 5 201 19 217 4.0e-16 78 COG0398 Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain 223 650067187 233 26.12 3 222 11 254 7.0e-31 127 COG0861 Membrane protein TerC, possibly involved in tellurium resistance 254 650067189 272 30.89 147 269 1 123 2.0e-19 89.9 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650067190 366 28.86 1 345 1 338 1.0e-48 186 COG0673 Predicted dehydrogenase 342 650067191 361 33.52 2 357 1 338 2.0e-62 233 COG0673 Predicted dehydrogenase 342 650067192 322 24.92 1 313 3 274 4.0e-32 132 COG1082 Sugar phosphate isomerase/epimerase 274 650067193 240 58.97 1 233 2 235 2.0e-93 335 COG4813 Trehalose utilization protein 261 650067194 220 27.62 14 219 17 200 5.0e-22 97.8 COG1573 Uracil-DNA glycosylase 202 650067195 106 44 7 106 8 107 1.0e-25 108 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650067198 241 31.53 19 221 11 212 1.0e-33 136 COG0664 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases 214 650067199 748 61.02 10 745 11 753 0.0e+00 984 COG1882 Pyruvate-formate lyase 755 650067200 242 37.87 1 234 16 247 3.0e-65 241 COG1180 Pyruvate-formate lyase-activating enzyme 260 650067201 450 24.39 3 445 1 429 4.0e-35 142 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067202 294 36.99 1 291 2 293 2.0e-55 209 COG1175 ABC-type sugar transport system, permease component 295 650067203 275 35.87 2 274 7 281 1.0e-48 187 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067204 618 25.32 143 603 52 451 4.0e-38 153 COG2972 Sensor histidine kinase YesM 456 650067207 156 33.1 1 141 2 145 1.0e-26 112 COG0735 Fe2+ or Zn2+ uptake regulation protein 145 650067208 85 55.56 5 85 7 87 7.0e-27 111 COG0759 Membrane-anchored protein YidD, putatitve component of membrane protein insertase Oxa1/YidC/SpoIIIJ 92 650067210 333 38.14 1 332 10 301 5.0e-69 254 COG0803 ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA 303 650067211 249 44.88 10 214 2 205 1.0e-69 256 COG1121 ABC-type Mn2+/Zn2+ transport system, ATPase component 254 650067212 268 38.64 1 264 5 268 4.0e-34 138 COG1108 ABC-type Mn2+/Zn2+ transport system, permease component 274 650067213 237 37.56 2 215 9 219 4.0e-33 135 COG0785 Cytochrome c biogenesis protein CcdA 220 650067214 141 42.74 1 123 3 126 3.0e-27 113 COG1321 Mn-dependent transcriptional regulator, DtxR family 154 650067215 518 32.66 143 518 28 388 1.0e-68 254 COG1649 Uncharacterized lipoprotein YddW, UPF0748 family 418 650067216 307 27.95 1 282 10 271 3.0e-29 122 COG1752 Predicted acylesterase/phospholipase RssA, containd patatin domain 306 650067218 330 52.66 1 319 1 314 1.0e-102 366 COG3872 Uncharacterized conserved protein YqhQ 318 650067220 148 60.56 2 143 1 142 2.0e-53 201 COG0757 3-dehydroquinate dehydratase 146 650067221 356 38.4 1 356 9 383 1.0e-89 323 COG0006 Xaa-Pro aminopeptidase 384 650067222 185 46.51 1 129 3 131 6.0e-40 157 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 131 650067223 417 43.36 1 403 1 447 2.0e-109 389 COG0527 Aspartokinase 447 650067225 332 47.08 6 312 7 293 7.0e-77 281 COG3854 Stage III sporulation protein SpoIIIAA 308 650067233 167 31.87 7 166 1 140 3.0e-22 97.8 COG0511 Biotin carboxyl carrier protein 140 650067234 137 53.17 7 131 2 127 2.0e-26 111 COG1302 Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family 131 650067235 179 22.81 76 169 2 115 6.0e-06 44.1 COG1302 Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family 131 650067237 152 44.59 1 148 8 151 4.0e-32 130 COG0781 Transcription termination factor NusB 151 650067238 286 56.38 5 285 1 282 8.0e-107 380 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 283 650067239 461 51.83 13 450 4 433 0.0e+00 493 COG1570 Exonuclease VII, large subunit 440 650067240 86 48.48 9 74 11 76 5.0e-09 53 COG1722 Exonuclease VII small subunit 81 650067241 301 42.38 6 270 2 257 1.0e-65 243 COG0142 Geranylgeranyl pyrophosphate synthase 322 650067242 635 56.85 1 625 3 626 0.0e+00 872 COG1154 Deoxyxylulose-5-phosphate synthase 627 650067243 290 59.75 6 246 2 241 4.0e-93 334 COG1189 Predicted rRNA methylase YqxC, contains S4 and FtsJ domains 245 650067245 149 47.3 1 148 3 150 2.0e-45 175 COG1438 Arginine repressor 150 650067246 579 47.64 1 569 1 557 0.0e+00 552 COG0497 DNA repair ATPase RecN 557 650067249 300 47.06 1 299 1 306 7.0e-99 353 COG4189 Predicted transcriptional regulator 308 650067250 412 24.83 2 406 1 432 8.0e-28 118 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067251 291 33.56 1 289 5 290 1.0e-46 180 COG1175 ABC-type sugar transport system, permease component 295 650067252 304 38.18 29 300 8 279 3.0e-57 215 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067253 277 24.16 3 242 2 262 6.0e-17 81.5 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650067257 473 44.95 1 462 1 453 0.0e+00 468 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component or related enzyme 454 650067258 346 45.59 10 346 15 353 5.0e-111 394 COG1071 TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha 358 650067259 328 55.25 3 326 1 322 0.0e+00 474 COG0022 Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component 324 650067260 469 37.58 8 460 3 396 3.0e-99 355 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component 404 650067261 226 37.17 1 225 7 216 2.0e-47 181 COG0321 Lipoate-protein ligase B 221 650067263 376 24.94 1 376 1 414 1.0e-60 227 COG2195 Di- or tripeptidase 414 650067266 189 27.78 52 180 9 150 9.0e-09 53.5 COG0494 8-oxo-dGTP pyrophosphatase MutT and related house-cleaning NTP pyrophosphohydrolases, NUDIX family 161 650067267 404 37.31 14 402 1 381 7.0e-92 331 COG1379 PHP family phosphoesterase with a Zn ribbon 403 650067268 207 26.56 9 200 14 200 1.0e-11 63.4 COG1300 Uncharacterized membrane protein SpoIIM, required for sporulation 207 650067269 154 40.27 1 149 1 145 1.0e-33 135 COG0735 Fe2+ or Zn2+ uptake regulation protein 145 650067271 294 44.75 1 293 5 299 2.0e-87 315 COG4974 Site-specific recombinase XerD 300 650067272 274 43.87 9 274 2 262 7.0e-74 270 COG0005 Purine nucleoside phosphorylase 262 650067273 396 36.78 1 394 2 386 2.0e-93 335 COG1686 D-alanyl-D-alanine carboxypeptidase 389 650067274 117 35.92 11 113 12 114 4.0e-16 76.6 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 117 650067275 152 34.07 13 143 8 142 2.0e-27 114 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) 146 650067276 251 40 8 249 1 244 3.0e-54 205 COG1191 DNA-directed RNA polymerase specialized sigma subunit 247 650067280 443 41.13 5 409 1 394 3.0e-113 402 COG0019 Diaminopimelate decarboxylase 394 650067281 143 47.73 14 140 10 141 3.0e-42 163 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 158 650067282 147 36.64 15 145 2 131 1.0e-26 112 COG0824 Acyl-CoA thioesterase FadM 137 650067283 366 48.64 147 363 1 216 8.0e-59 221 COG1985 Pyrimidine reductase, riboflavin biosynthesis 218 650067284 222 53 1 200 1 198 6.0e-68 250 COG0307 Riboflavin synthase alpha chain 204 650067285 412 61.08 5 207 1 203 2.0e-84 306 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 203 650067286 155 64.67 3 152 2 151 5.0e-57 213 COG0054 6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain) 152 650067287 263 39.92 1 251 2 242 8.0e-37 147 COG1354 Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family 248 650067288 201 42.39 1 183 3 184 2.0e-42 165 COG1386 Chromosome segregation and condensation protein ScpB 184 650067290 147 46.72 1 137 1 121 1.0e-32 132 COG3874 Uncharacterized spore protein YtfJ 138 650067291 394 35.54 6 370 3 372 7.0e-75 274 COG1686 D-alanyl-D-alanine carboxypeptidase 389 650067292 210 54.31 1 197 1 197 1.0e-65 242 COG2715 Spore maturation protein SpmA (function unknown) 206 650067293 177 48.15 16 177 1 162 2.0e-40 158 COG0700 Spore maturation protein SpmB (function unknown) 162 650067295 251 49.39 1 239 2 246 3.0e-78 285 COG1187 16S rRNA U516 pseudouridylate synthase RsuA and related 23S rRNA U2605, pseudouridylate synthases 248 650067297 139 27.69 2 118 7 135 1.0e-15 75.7 COG1225 Peroxiredoxin 157 650067298 567 26.14 73 563 1 473 6.0e-75 275 COG1333 Cytochrome c biogenesis protein ResB 478 650067299 417 30.34 185 415 61 281 3.0e-23 103 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 281 650067300 238 50 7 238 2 229 3.0e-67 248 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067301 477 31.36 27 471 11 447 6.0e-72 265 COG5002 Signal transduction histidine kinase 459 650067302 530 50 1 323 3 323 3.0e-97 349 COG0111 Phosphoglycerate dehydrogenase or related dehydrogenase 324 650067303 199 26.52 20 188 38 218 2.0e-05 43 COG1266 Membrane protease YdiL, CAAX protease family 226 650067305 272 26.44 1 271 1 284 2.0e-28 119 COG1408 Predicted phosphohydrolase, MPP superfamily 284 650067306 303 33.66 106 303 58 261 3.0e-32 132 COG0726 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family 267 650067308 203 31.7 1 199 1 222 1.0e-31 129 COG4862 Negative regulator of genetic competence, sporulation and motility 224 650067309 231 34.33 1 219 38 270 2.0e-25 109 COG2339 Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family 274 650067312 217 24.89 5 217 10 229 2.0e-15 75.7 COG5581 c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains 233 650067314 226 47.51 9 226 2 219 9.0e-69 253 COG0283 Cytidylate kinase 222 650067315 196 35.45 1 177 32 220 2.0e-26 112 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 255 650067316 405 41.33 5 395 1 385 7.0e-93 334 COG0539 Ribosomal protein S1 541 650067317 440 60.23 1 438 1 440 0.0e+00 602 COG1160 Predicted GTPases 444 650067318 208 41.71 1 195 2 200 3.0e-41 161 COG0344 Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase 200 650067319 346 54.41 4 332 3 329 7.0e-121 427 COG0240 Glycerol-3-phosphate dehydrogenase 329 650067326 90 64.44 1 90 2 91 2.0e-29 120 COG0776 Bacterial nucleoid DNA-binding protein 94 650067329 320 30.28 3 318 8 303 3.0e-48 185 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 303 650067332 252 44.54 12 248 2 238 9.0e-75 273 COG2226 Ubiquinone/menaquinone biosynthesis C-methylase UbiE 238 650067333 290 35.31 1 286 6 289 2.0e-39 156 COG0382 4-hydroxybenzoate polyprenyltransferase 289 650067334 200 55.38 5 199 1 187 3.0e-70 257 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase 191 650067335 287 34.6 8 270 4 249 2.0e-43 169 COG1427 Predicted periplasmic solute-binding protein 252 650067336 324 39.14 5 324 2 322 8.0e-71 260 COG0142 Geranylgeranyl pyrophosphate synthase 322 650067337 147 60.45 1 134 2 135 3.0e-55 207 COG0105 Nucleoside diphosphate kinase 135 650067338 267 42.48 10 266 1 266 2.0e-70 259 COG1352 Methylase of chemotaxis methyl-accepting proteins 268 650067340 339 46.55 1 332 57 368 1.0e-106 380 COG0082 Chorismate synthase 369 650067341 364 49.04 1 363 1 360 3.0e-116 412 COG0337 3-dehydroquinate synthetase 360 650067342 124 57.5 1 120 1 120 3.0e-39 153 COG4401 Chorismate mutase 125 650067343 517 48.45 20 497 1 461 0.0e+00 517 COG0147 Anthranilate/para-aminobenzoate synthases component I 462 650067344 346 49.7 4 341 1 338 4.0e-114 404 COG0547 Anthranilate phosphoribosyltransferase 338 650067345 269 50 3 258 1 252 5.0e-81 294 COG0134 Indole-3-glycerol phosphate synthase 254 650067346 205 43.07 4 204 21 207 5.0e-47 180 COG0135 Phosphoribosylanthranilate isomerase 208 650067347 398 67.68 3 398 1 395 0.0e+00 678 COG0133 Tryptophan synthase beta chain 396 650067348 268 44.98 1 268 1 261 2.0e-82 298 COG0159 Tryptophan synthase alpha chain 265 650067349 365 40.72 3 358 2 352 9.0e-92 330 COG0079 Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase 356 650067350 362 36.07 1 278 4 276 2.0e-62 233 COG0287 Prephenate dehydrogenase 279 650067351 197 36.46 2 181 1 177 5.0e-29 120 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650067353 195 36.92 1 183 3 196 2.0e-32 132 COG0406 Broad specificity phosphatase PhoE 208 650067358 181 26.9 19 180 7 173 3.0e-21 94.9 COG0723 Rieske Fe-S protein 177 650067361 210 41.15 1 192 1 179 2.0e-31 129 COG4347 Uncharacterized membrane protein YpjA 200 650067363 123 27.27 14 123 2 102 2.0e-14 71.6 COG1694 NTP pyrophosphatase, house-cleaning of non-canonical NTPs 102 650067365 267 40.96 3 267 1 265 1.0e-68 253 COG0289 Dihydrodipicolinate reductase 266 650067366 139 54.48 1 134 5 138 2.0e-51 195 COG1803 Methylglyoxal synthase 142 650067367 235 34.27 1 204 7 213 2.0e-31 129 COG2120 N-acetylglucosaminyl deacetylase, LmbE family 237 650067368 387 28.31 8 378 6 381 3.0e-40 159 COG0438 Glycosyltransferase involved in cell wall bisynthesis 381 650067369 434 32.45 24 432 14 412 1.0e-63 237 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 412 650067370 311 42.47 90 307 1 216 2.0e-55 209 COG0340 Biotin-(acetyl-CoA carboxylase) ligase 238 650067371 293 57.3 8 274 3 268 4.0e-103 367 COG0413 Ketopantoate hydroxymethyltransferase 268 650067372 296 49.32 1 290 1 285 1.0e-99 356 COG0414 Panthothenate synthetase 285 650067373 127 69.05 2 127 1 126 2.0e-48 184 COG0853 Aspartate 1-decarboxylase 126 650067375 961 32.48 252 945 5 651 6.0e-110 392 COG1199 Rad3-related DNA helicase 654 650067376 221 44.33 5 207 6 208 5.0e-59 220 COG2344 NADH/NAD ratio-sensing transcriptional regulator Rex 211 650067377 433 40.29 7 409 4 411 9.0e-88 317 COG0402 Cytosine/adenosine deaminase or related metal-dependent hydrolase 421 650067378 172 21.25 2 160 3 152 9.0e-13 66.6 COG5353 Uncharacterized protein YpmB 161 650067380 500 40.86 17 499 95 594 9.0e-103 367 COG0465 ATP-dependent Zn proteases 596 650067381 290 44.33 1 290 1 290 2.0e-79 289 COG1250 3-hydroxyacyl-CoA dehydrogenase 307 650067382 402 57.64 1 399 1 395 0.0e+00 565 COG0282 Acetate kinase 396 650067383 431 52.4 1 431 1 435 0.0e+00 565 COG0017 Aspartyl/asparaginyl-tRNA synthetase 435 650067384 268 29.82 21 248 10 212 5.0e-33 134 COG3935 DNA replication protein DnaD 246 650067385 229 30.3 1 228 2 225 3.0e-30 125 COG1011 FMN phosphatase YigB, HAD superfamily 229 650067389 336 24.12 48 291 41 283 5.0e-26 111 COG2334 Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist 331 650067390 203 32.79 21 202 1 180 8.0e-27 113 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650067396 218 32.35 12 214 6 196 4.0e-27 115 COG0235 Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase 219 650067397 226 32.42 6 224 2 218 1.0e-43 169 COG4359 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase (methionine salvage) 220 650067398 404 37.5 1 401 19 424 6.0e-102 364 COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit, or a RuBisCO-like protein 429 650067399 289 43.07 15 281 4 264 1.0e-68 253 COG0345 Pyrroline-5-carboxylate reductase 266 650067400 415 57.93 1 415 2 417 0.0e+00 585 COG0014 Gamma-glutamyl phosphate reductase 417 650067401 367 51.1 4 366 8 369 3.0e-123 435 COG0263 Glutamate 5-kinase 369 650067402 397 39.02 15 393 3 388 3.0e-99 355 COG0436 Aspartate/methionine/tyrosine aminotransferase 393 650067403 270 41.7 9 270 3 269 4.0e-60 224 COG0388 Predicted amidohydrolase 274 650067405 310 33.89 1 299 1 291 2.0e-44 173 COG0583 DNA-binding transcriptional regulator, LysR family 297 650067406 488 58.33 16 479 1 422 0.0e+00 629 COG0065 Homoaconitase/3-isopropylmalate dehydratase large subunit 423 650067407 175 53.66 1 164 1 156 1.0e-60 225 COG0066 3-isopropylmalate dehydratase small subunit 191 650067409 525 37.23 305 522 2 228 1.0e-49 191 COG0860 N-acetylmuramoyl-L-alanine amidase 231 650067411 461 39.57 243 458 2 228 3.0e-53 203 COG0860 N-acetylmuramoyl-L-alanine amidase 231 650067414 228 54.72 1 212 1 211 6.0e-79 287 COG0177 Endonuclease III 211 650067416 589 38.19 43 571 1 518 6.0e-122 431 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650067418 153 25.49 7 150 7 157 1.0e-08 52.3 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650067420 283 25.23 73 281 10 207 5.0e-16 78.4 COG2755 Lysophospholipase L1 or related esterase 216 650067421 322 36.19 9 318 4 293 2.0e-70 259 COG1131 ABC-type multidrug transport system, ATPase component 293 650067422 329 20.74 114 328 65 278 2.0e-13 69.8 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 278 650067423 659 57.36 17 659 1 634 0.0e+00 877 COG0187 DNA gyrase/topoisomerase IV, subunit B 635 650067424 819 48.01 3 807 4 797 0.0e+00 896 COG0188 DNA gyrase/topoisomerase IV, subunit A 804 650067425 143 38.32 29 134 20 126 4.0e-10 57.6 COG1846 DNA-binding transcriptional regulator, MarR family 126 650067426 244 31.82 10 224 76 289 3.0e-40 158 COG0564 Pseudouridylate synthase, 23S rRNA- or tRNA-specific 289 650067428 172 41.67 1 168 4 168 2.0e-37 148 COG3153 Predicted N-acetyltransferase YhbS 171 650067430 599 35.28 4 597 1 595 0.0e+00 461 COG1164 Oligoendopeptidase F 598 650067432 93 39.08 1 87 6 92 7.0e-19 85.4 COG2388 Predicted acetyltransferase, GNAT superfamily 99 650067434 151 18.05 7 124 5 137 5.0e-05 40.6 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650067435 198 24.04 1 182 3 185 8.0e-13 67.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650067436 313 32.29 1 306 1 305 2.0e-52 199 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650067437 279 31.43 171 275 17 120 2.0e-17 83 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650067442 461 31.28 24 459 16 449 2.0e-46 180 COG0534 Na+-driven multidrug efflux pump 455 650067443 86 40.48 1 84 5 87 8.0e-16 75.3 COG1937 DNA-binding transcriptional regulator, FrmR family 89 650067444 75 47.37 1 75 2 77 2.0e-19 87.2 COG0425 TusA-related sulfurtransferase 78 650067445 161 41.88 4 161 2 137 3.0e-34 137 COG2210 Peroxiredoxin family protein 137 650067446 119 35.05 26 119 4 100 6.0e-18 83 COG0607 Rhodanese-related sulfurtransferase 110 650067447 98 33.33 1 98 3 104 4.0e-15 73 COG0607 Rhodanese-related sulfurtransferase 110 650067448 191 40.82 95 189 9 106 2.0e-15 76.1 COG0607 Rhodanese-related sulfurtransferase 110 650067449 375 26.84 130 295 25 211 2.0e-17 83.8 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650067450 260 28.24 2 260 1 255 2.0e-08 53.1 COG0730 Uncharacterized membrane protein YfcA 258 650067451 641 29.55 96 628 1 515 1.0e-65 244 COG1657 Squalene cyclase 517 650067453 267 33.33 136 261 1 126 4.0e-21 95.3 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650067454 490 23.89 1 432 5 462 1.0e-46 181 COG3119 Arylsulfatase A or related enzyme 475 650067457 268 36.08 8 260 1 253 6.0e-51 194 COG1349 DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family 253 650067458 335 25.95 36 295 47 293 4.0e-21 95.8 COG2334 Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist 331 650067460 263 35.94 1 254 4 258 6.0e-51 194 COG2116 Formate/nitrite transporter FocA, FNT family 265 650067461 175 38.89 1 175 1 180 3.0e-29 121 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650067462 325 28.53 12 325 3 314 1.0e-35 144 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650067464 423 33.33 62 160 26 124 1.0e-20 94.5 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650067465 612 34.51 1 473 1 457 2.0e-117 416 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase 477 650067466 463 25.8 186 461 29 298 4.0e-34 139 COG3735 Uncharacterized conserved protein YbaP, TraB family 299 650067472 170 22 6 105 38 137 2.0e-10 59.1 COG1695 DNA-binding transcriptional regulator, PadR family 138 650067473 189 28.72 5 183 4 196 6.0e-31 127 COG0288 Carbonic anhydrase 207 650067475 505 49.6 3 501 1 497 0.0e+00 600 COG2317 Zn-dependent carboxypeptidase, M32 family 497 650067476 334 25.89 1 334 1 332 5.0e-39 155 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component 335 650067477 240 45.7 3 223 2 218 9.0e-74 270 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 248 650067478 277 30.92 26 274 3 251 2.0e-48 186 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 258 650067479 326 26.77 2 310 10 318 8.0e-39 154 COG4129 Uncharacterized membrane protein YgaE, UPF0421/DUF939 family 332 650067483 924 48.38 1 821 3 824 0.0e+00 869 COG0249 DNA mismatch repair ATPase MutS 843 650067484 660 39.22 1 659 1 638 0.0e+00 612 COG0323 DNA mismatch repair ATPase MutL 638 650067485 315 46.77 5 313 1 308 2.0e-97 349 COG0324 tRNA A37 N6-isopentenylltransferase MiaA 308 650067486 79 51.32 1 76 1 76 1.0e-23 101 COG1923 sRNA-binding regulator protein Hfq 77 650067487 886 37.34 24 654 1 615 0.0e+00 501 COG0744 Membrane carboxypeptidase (penicillin-binding protein) 661 650067488 185 27.61 1 163 1 162 4.0e-22 97.8 COG2306 Predicted RNA-binding protein, associated with RNAse of E/G family 183 650067489 217 25.12 13 208 7 206 4.0e-16 78.4 COG2949 Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin 235 650067491 429 52.32 13 417 3 405 9.0e-122 430 COG2262 50S ribosomal subunit-associated GTPase HflX 411 650067492 417 59.07 6 413 9 416 0.0e+00 579 COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance 416 650067493 136 31.73 12 114 1 104 9.0e-14 69.4 COG0789 DNA-binding transcriptional regulator, MerR family 124 650067494 442 51.24 3 439 1 441 0.0e+00 569 COG0174 Glutamine synthetase 443 650067496 179 28.49 6 174 6 177 7.0e-28 116 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650067498 208 49.76 1 208 1 201 5.0e-59 220 COG1974 SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase) 201 650067502 263 32.45 1 263 2 229 1.0e-28 120 COG1011 FMN phosphatase YigB, HAD superfamily 229 650067504 178 36.69 1 169 1 160 1.0e-31 129 COG1791 Acireductone dioxygenase (methionine salvage), cupin superfamily 181 650067505 1146 42.67 310 1143 4 842 0.0e+00 875 COG1410 Methionine synthase I, cobalamin-binding domain 842 650067506 309 51.96 1 305 2 291 2.0e-78 286 COG1234 Ribonuclease BN, tRNA processing enzyme 292 650067507 263 39.7 1 262 4 266 2.0e-66 245 COG0647 Ribonucleotide monophosphatase NagD, HAD superfamily 269 650067508 272 36.86 1 270 1 273 5.0e-58 217 COG0266 Formamidopyrimidine-DNA glycosylase 273 650067509 282 30.53 4 280 1 273 5.0e-40 158 COG0648 Endonuclease IV 280 650067514 358 28.76 79 355 65 352 3.0e-22 99.6 COG2933 23S rRNA C2498 (ribose-2'-O)-methylase RlmM 358 650067515 489 27.49 18 273 2 288 3.0e-30 126 COG0515 Serine/threonine protein kinase 384 650067518 289 18.56 1 254 2 245 7.0e-04 38.2 COG1192 Cellulose biosynthesis protein BcsQ 259 650067519 637 24.82 269 539 65 332 3.0e-10 60.7 COG4962 Pilus assembly protein, ATPase of CpaF family 355 650067525 517 43.08 1 511 1 511 0.0e+00 499 COG0488 ATPase components of ABC transporters with duplicated ATPase domains 530 650067526 376 42.63 35 280 6 254 1.0e-56 214 COG0476 Molybdopterin or thiamine biosynthesis adenylyltransferase 254 650067528 239 39.73 5 224 3 225 2.0e-42 166 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067530 214 36.45 4 214 2 211 2.0e-40 159 COG1564 Thiamine pyrophosphokinase 212 650067531 217 41.38 3 201 3 204 5.0e-41 161 COG2860 Uncharacterized membrane protein YeiH 209 650067532 242 35.59 9 242 66 297 4.0e-44 171 COG2382 Enterochelin esterase or related enzyme 299 650067533 375 42.61 38 375 6 357 4.0e-103 368 COG1071 TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha 358 650067534 325 59.57 3 325 1 324 0.0e+00 478 COG0022 Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component 324 650067535 439 46 2 438 1 404 3.0e-107 382 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component 404 650067536 471 51.99 11 458 6 454 0.0e+00 504 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component or related enzyme 454 650067537 264 68.8 1 264 3 268 5.0e-118 417 COG0207 Thymidylate synthase 268 650067538 164 40 1 162 1 167 3.0e-38 151 COG0262 Dihydrofolate reductase 167 650067539 495 42.95 22 491 1 453 0.0e+00 491 COG0493 NADPH-dependent glutamate synthase beta chain or related oxidoreductase 457 650067540 761 31.02 2 607 1 554 9.0e-119 421 COG0550 DNA topoisomerase IA 570 650067541 245 18.88 3 242 2 228 6.0e-14 71.1 COG1011 FMN phosphatase YigB, HAD superfamily 229 650067543 393 23.73 15 378 16 385 2.0e-11 64.1 COG2814 Predicted arabinose efflux permease, MFS family 394 650067547 225 40 3 206 2 204 1.0e-52 199 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067548 484 33.44 147 467 17 335 9.0e-49 188 COG0642 Signal transduction histidine kinase 336 650067551 377 53.2 1 354 1 356 9.0e-123 433 COG0448 ADP-glucose pyrophosphorylase 393 650067552 657 49.12 10 626 6 624 0.0e+00 687 COG0296 1,4-alpha-glucan branching enzyme 628 650067553 582 28.99 131 543 1 494 3.0e-54 206 COG0366 Glycosidase 505 650067554 480 48.36 267 478 10 222 3.0e-67 249 COG0765 ABC-type amino acid transport system, permease component 222 650067557 242 39.42 138 240 16 109 1.0e-12 67.3 COG3584 3D (Asp-Asp-Asp) domain 109 650067558 282 45.64 87 276 65 257 4.0e-42 165 COG0726 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family 267 650067559 340 46.59 1 327 3 336 1.0e-95 343 COG1902 2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family 363 650067560 222 41.1 1 218 1 219 5.0e-21 94.6 COG1842 Phage shock protein A 225 650067561 134 21.97 3 134 5 131 1.0e-08 52.2 COG3766 Uncharacterized membrane protein YjfL, UPF0719 family 133 650067565 428 41.06 14 426 1 404 3.0e-102 365 COG0303 Molybdopterin biosynthesis enzyme 404 650067566 167 37.5 1 166 2 161 4.0e-33 134 COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein 161 650067567 360 27.81 15 346 1 285 2.0e-33 136 COG4974 Site-specific recombinase XerD 300 650067568 167 33.58 26 161 1 135 2.0e-17 82.3 COG5628 Predicted acetyltransferase 143 650067569 443 22.1 6 443 2 431 3.0e-26 113 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067570 285 34.49 1 282 5 291 6.0e-44 171 COG1175 ABC-type sugar transport system, permease component 295 650067571 290 39.78 15 289 3 281 2.0e-56 212 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067575 145 28.1 19 135 3 123 9.0e-11 59.6 COG1846 DNA-binding transcriptional regulator, MarR family 126 650067576 211 52.34 1 209 1 211 3.0e-66 244 COG2910 Putative NADH-flavin reductase 211 650067581 249 38.04 1 242 1 251 9.0e-46 176 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650067583 525 19.02 38 443 33 408 1.0e-11 65.4 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067584 293 31.86 3 292 1 281 2.0e-48 186 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067585 212 33.05 11 124 10 127 1.0e-18 86.6 COG2372 Copper-binding protein CopC (methionine-rich) 127 650067586 362 21.86 11 278 10 288 1.0e-13 71.5 COG1276 Putative copper export protein 289 650067589 213 48.08 3 210 1 208 3.0e-53 201 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650067590 272 32.92 1 221 1 240 2.0e-27 116 COG0702 Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains 275 650067598 196 28.14 22 188 18 181 2.0e-20 92.8 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650067599 409 46.06 7 409 3 385 2.0e-110 393 COG2309 Leucyl aminopeptidase (aminopeptidase T) 385 650067600 410 46.57 5 409 1 385 6.0e-108 384 COG2309 Leucyl aminopeptidase (aminopeptidase T) 385 650067602 450 32.01 41 446 86 499 3.0e-56 213 COG0168 Trk-type K+ transport system, membrane component 499 650067603 378 36.65 1 378 2 350 2.0e-76 279 COG1063 Threonine dehydrogenase or related Zn-dependent dehydrogenase 350 650067604 241 41.94 15 231 10 226 3.0e-42 165 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 238 650067605 108 39.22 7 108 6 107 2.0e-11 61 COG4392 Branched-chain amino acid transport protein 107 650067607 443 25.16 28 330 27 325 3.0e-25 110 COG0438 Glycosyltransferase involved in cell wall bisynthesis 381 650067610 355 18.96 1 353 1 377 8.0e-20 91.6 COG0438 Glycosyltransferase involved in cell wall bisynthesis 381 650067611 305 37.82 1 304 1 311 8.0e-61 227 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650067612 641 25.51 14 631 29 632 2.0e-72 267 COG1368 Phosphoglycerol transferase MdoB or a related enzyme of AlkP superfamily 650 650067613 331 43.96 10 328 1 321 3.0e-92 332 COG0502 Biotin synthase or related enzyme 335 650067614 101 32.22 1 86 6 93 8.0e-05 38.8 COG0607 Rhodanese-related sulfurtransferase 110 650067616 416 26.83 1 322 1 284 1.0e-38 154 COG2404 Oligoribonuclease NrnB or cAMP/cGMP phosphodiesterase, DHH superfamily 339 650067618 95 18.07 9 89 19 101 9.0e-05 38.7 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 111 650067619 198 45.18 3 198 15 209 1.0e-37 150 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 209 650067620 647 54.66 35 600 1 566 0.0e+00 590 COG0843 Heme/copper-type cytochrome/quinol oxidase, subunit 1 566 650067621 334 43.1 7 245 1 233 2.0e-53 202 COG1622 Heme/copper-type cytochrome/quinol oxidase, subunit 2 247 650067623 481 35.43 11 480 1 456 3.0e-110 392 COG1167 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain 459 650067624 206 36.45 1 200 1 200 1.0e-43 169 COG1279 Arginine exporter protein ArgO 202 650067626 270 22.77 52 251 39 262 4.0e-05 42.1 COG1082 Sugar phosphate isomerase/epimerase 274 650067629 306 28.24 1 241 1 241 4.0e-36 145 COG1876 LD-carboxypeptidase LdcB, LAS superfamily 241 650067633 303 24.03 11 303 7 307 4.0e-20 92 COG3173 Predicted kinase, aminoglycoside phosphotransferase (APT) family 321 650067636 178 48.04 2 177 1 169 1.0e-42 166 COG4675 Microcystin-dependent protein (function unknown) 170 650067637 165 51.18 2 165 1 170 1.0e-42 165 COG4675 Microcystin-dependent protein (function unknown) 170 650067638 169 44.71 2 169 1 170 2.0e-42 165 COG4675 Microcystin-dependent protein (function unknown) 170 650067643 316 32.38 10 313 11 314 9.0e-33 134 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 319 650067646 83 35.62 1 71 1 73 4.0e-11 59.9 COG3655 DNA-binding transcriptional regulator, XRE family 73 650067650 153 20.31 31 153 35 162 2.0e-04 38.8 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650067660 174 25 1 164 20 199 3.0e-18 85.1 COG3896 Chloramphenicol 3-O-phosphotransferase 205 650067664 151 27.52 13 113 7 115 1.0e-08 52.3 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650067667 194 30.94 7 141 5 142 6.0e-13 67.7 COG1896 5'-deoxynucleotidase YfbR and related HD superfamily hydrolases 193 650067670 232 39.39 4 232 2 229 9.0e-62 230 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067671 307 26.8 1 305 39 329 8.0e-35 141 COG0642 Signal transduction histidine kinase 336 650067672 307 38.94 5 303 4 293 2.0e-66 246 COG1131 ABC-type multidrug transport system, ATPase component 293 650067677 133 43.28 3 132 2 135 7.0e-27 113 COG3981 Predicted acetyltransferase 174 650067680 182 37.14 6 174 9 182 2.0e-26 112 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650067682 143 20.61 1 131 1 118 3.0e-07 47.9 COG1246 N-acetylglutamate synthase or related acetyltransferase, GNAT family 153 650067684 222 28.76 1 217 3 227 8.0e-26 110 COG1011 FMN phosphatase YigB, HAD superfamily 229 650067686 202 43.54 50 194 43 189 9.0e-33 133 COG0110 Acetyltransferase (isoleucine patch superfamily) 190 650067688 648 30.6 1 633 7 696 1.0e-117 417 COG0480 Translation elongation factor EF-G, a GTPase 697 650067690 672 29.34 410 667 2 251 1.0e-20 95.6 COG0642 Signal transduction histidine kinase 336 650067691 522 41.88 398 513 2 116 5.0e-21 96.1 COG0784 CheY chemotaxis protein or a CheY-like REC (receiver) domain 130 650067695 181 18 4 180 83 282 6.0e-12 64 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650067697 162 39.02 2 162 10 173 3.0e-24 104 COG0290 Translation initiation factor IF-3 176 650067698 572 30.35 40 543 10 472 5.0e-82 299 COG0008 Glutamyl- or glutaminyl-tRNA synthetase 472 650067699 287 22.14 26 285 5 232 4.0e-16 79.1 COG1357 Uncharacterized protein YjbI, contains pentapeptide repeats 238 650067700 141 30.71 4 141 7 146 4.0e-14 70.6 COG3238 Uncharacterized membrane protein YdcZ, DUF606 family 150 650067701 233 26.17 9 220 1 214 5.0e-23 101 COG0664 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases 214 650067702 152 31.29 1 145 3 149 1.0e-12 66 COG3238 Uncharacterized membrane protein YdcZ, DUF606 family 150 650067704 413 18.31 44 406 50 390 2.0e-08 54.4 COG2814 Predicted arabinose efflux permease, MFS family 394 650067705 150 38.52 25 144 2 122 3.0e-10 58 COG4270 Uncharacterized membrane protein 131 650067706 208 21.71 1 175 4 177 2.0e-11 62.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650067707 153 31.29 6 152 8 153 6.0e-12 63.4 COG5528 Uncharacterized membrane protein 155 650067710 411 21.34 36 349 37 339 1.0e-19 91.4 COG2814 Predicted arabinose efflux permease, MFS family 394 650067717 196 35.6 1 184 2 188 1.0e-23 103 COG0693 Putative intracellular protease/amidase 188 650067718 174 25.93 20 150 1 120 5.0e-12 64.2 COG5628 Predicted acetyltransferase 143 650067719 157 35.85 37 142 16 121 9.0e-11 59.9 COG1846 DNA-binding transcriptional regulator, MarR family 126 650067720 457 21.61 13 407 13 363 3.0e-14 73.3 COG2814 Predicted arabinose efflux permease, MFS family 394 650067721 183 36.59 20 180 16 179 8.0e-25 106 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650067724 502 27.78 5 180 3 182 2.0e-25 111 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650067727 549 71.9 2 548 5 550 0.0e+00 837 COG3573 Predicted oxidoreductase 552 650067729 442 19.79 60 437 39 394 2.0e-07 51 COG2814 Predicted arabinose efflux permease, MFS family 394 650067730 305 46.69 1 305 1 298 9.0e-114 403 COG4989 Predicted oxidoreductase 298 650067732 305 31.72 5 301 3 305 4.0e-48 185 COG0492 Thioredoxin reductase 305 650067733 578 39.62 6 578 5 567 0.0e+00 466 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650067734 274 34.23 3 252 11 249 1.0e-38 153 COG0861 Membrane protein TerC, possibly involved in tellurium resistance 254 650067737 197 23.33 17 186 3 182 6.0e-22 97.5 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650067739 162 25 3 162 21 178 2.0e-18 85.5 COG0431 NAD(P)H-dependent FMN reductase 184 650067741 392 28.24 17 392 15 389 1.0e-64 240 COG4552 Predicted acetyltransferase 389 650067744 635 54.49 36 635 2 584 0.0e+00 746 COG0441 Threonyl-tRNA synthetase 589 650067749 261 32.38 7 111 2 106 1.0e-14 74 COG0789 DNA-binding transcriptional regulator, MerR family 124 650067751 315 25.76 2 315 1 315 8.0e-36 144 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650067754 613 26.2 18 376 1 327 3.0e-43 170 COG3469 Chitinase 332 650067755 567 39.79 1 552 5 563 3.0e-127 449 COG0443 Molecular chaperone DnaK (HSP70) 579 650067759 762 57.27 426 755 1 328 8.0e-120 425 COG0620 Methionine synthase II (cobalamin-independent) 330 650067760 476 34.7 33 238 11 228 1.0e-47 184 COG0860 N-acetylmuramoyl-L-alanine amidase 231 650067761 232 45.92 5 231 2 229 2.0e-57 215 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067762 484 27.09 138 483 6 334 3.0e-39 156 COG0642 Signal transduction histidine kinase 336 650067764 402 18.69 44 359 17 340 2.0e-21 97 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067766 293 35.07 10 290 5 292 2.0e-44 173 COG1175 ABC-type sugar transport system, permease component 295 650067767 292 34.59 6 291 8 281 7.0e-49 187 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067770 536 42.08 7 536 1 539 0.0e+00 542 COG0405 Gamma-glutamyltranspeptidase 539 650067774 201 31.43 20 190 8 182 3.0e-24 105 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650067776 571 31.86 342 567 1 181 9.0e-36 145 COG2199 GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants 181 650067778 164 31.43 29 133 9 113 8.0e-10 56.9 COG1846 DNA-binding transcriptional regulator, MarR family 126 650067780 590 32.27 200 573 48 405 9.0e-40 158 COG0840 Methyl-accepting chemotaxis protein 408 650067784 313 49.67 8 313 5 309 2.0e-106 379 COG2066 Glutaminase 309 650067786 255 47.53 4 225 1 223 1.0e-77 283 COG1136 ABC-type lipoprotein export system, ATPase component 226 650067788 121 38.14 1 117 1 113 4.0e-16 76.9 COG5294 Uncharacterized protein YxeA 113 650067790 235 40.26 6 234 2 229 4.0e-60 224 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067791 470 30.07 166 470 36 327 7.0e-34 138 COG0642 Signal transduction histidine kinase 336 650067792 218 41.67 3 218 1 227 1.0e-54 206 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067795 296 36.77 12 295 3 293 4.0e-46 178 COG1175 ABC-type sugar transport system, permease component 295 650067796 308 33.11 9 307 2 281 7.0e-51 194 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067797 376 19.79 1 370 16 368 1.0e-13 71.3 COG0845 Multidrug efflux pump subunit AcrA (membrane-fusion protein) 372 650067800 464 19.74 9 458 4 426 2.0e-21 97.8 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067803 453 25.46 16 441 14 442 1.0e-45 177 COG0534 Na+-driven multidrug efflux pump 455 650067804 192 24.56 4 174 15 179 3.0e-10 58.5 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650067807 334 42.25 9 331 4 330 2.0e-52 199 COG0609 ABC-type Fe3+-siderophore transport system, permease component 334 650067808 340 42.9 11 340 1 330 2.0e-54 206 COG0609 ABC-type Fe3+-siderophore transport system, permease component 334 650067809 282 26.26 8 282 5 272 5.0e-24 104 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650067810 250 36 25 224 18 217 5.0e-41 161 COG4619 ABC-type iron transport system FetAB, ATPase component 223 650067812 794 32.31 504 760 3 253 2.0e-42 168 COG0142 Geranylgeranyl pyrophosphate synthase 322 650067817 361 35.36 4 352 1 333 8.0e-68 250 COG0136 Aspartate-semialdehyde dehydrogenase 334 650067818 458 30.51 5 446 18 462 3.0e-61 229 COG1757 Na+/H+ antiporter NhaC 485 650067822 475 29.72 9 470 20 487 9.0e-94 337 COG2368 Aromatic ring hydroxylase 493 650067823 264 35.15 57 257 41 241 3.0e-40 158 COG1876 LD-carboxypeptidase LdcB, LAS superfamily 241 650067825 408 26.41 29 404 19 397 3.0e-29 123 COG0402 Cytosine/adenosine deaminase or related metal-dependent hydrolase 421 650067827 231 40.79 4 229 2 225 4.0e-63 234 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067829 570 42.34 15 529 1 496 1.0e-111 397 COG0366 Glycosidase 505 650067830 673 37.37 96 479 1 388 3.0e-81 296 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 393 650067831 245 30.3 4 234 7 236 7.0e-47 180 COG2188 DNA-binding transcriptional regulator, GntR family 236 650067832 260 36.82 3 255 1 249 8.0e-43 167 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650067833 325 25.24 6 309 7 297 2.0e-21 96.9 COG2971 BadF-type ATPase, related to human N-acetylglucosamine kinase 301 650067835 258 57.54 1 251 68 316 4.0e-99 354 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 316 650067836 332 55.13 2 313 1 265 3.0e-109 388 COG4608 ABC-type oligopeptide transport system, ATPase component 309 650067837 554 39.53 34 554 20 553 2.0e-102 366 COG0747 ABC-type transport system, periplasmic component 556 650067838 334 47.31 1 334 1 316 3.0e-98 351 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650067839 298 54.48 22 298 10 288 2.0e-79 289 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650067841 360 32.13 2 360 1 341 2.0e-60 226 COG0673 Predicted dehydrogenase 342 650067844 298 30.83 175 294 8 127 9.0e-23 101 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650067845 439 22.09 87 397 2 293 4.0e-10 60 COG1397 ADP-ribosylglycohydrolase 314 650067846 268 21.34 4 224 7 229 2.0e-15 76.9 COG5285 Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family 299 650067847 269 26.98 143 268 2 127 4.0e-19 88.8 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650067848 301 19.19 6 297 9 293 6.0e-06 45.1 COG2962 Uncharacterized membrane protein RarD, contains two EamA domains 293 650067849 319 43.69 11 319 1 309 1.0e-92 333 COG4209 ABC-type polysaccharide transport system, permease component 309 650067850 531 21.59 2 449 1 417 4.0e-20 93.6 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067851 375 30.93 37 369 21 333 3.0e-53 202 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650067853 601 32.57 35 332 48 328 7.0e-29 122 COG3344 Retron-type reverse transcriptase 328 650067855 462 18.67 22 438 2 477 4.0e-20 92.8 COG1233 Phytoene dehydrogenase-related protein 487 650067856 270 27.15 3 151 33 182 2.0e-19 89.8 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650067863 385 31.27 10 372 2 355 5.0e-72 265 COG3424 Predicted naringenin-chalcone synthase 356 650067865 383 24.15 2 366 1 358 7.0e-29 121 COG0644 Dehydrogenase (flavoprotein) 396 650067868 148 30 27 145 23 135 6.0e-12 63.5 COG1765 Uncharacterized OsmC-related protein 137 650067869 131 60 1 126 1 130 3.0e-39 153 COG1970 Large-conductance mechanosensitive channel 130 650067875 125 43.27 16 119 12 114 2.0e-24 104 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650067876 182 35.57 1 179 1 187 5.0e-32 130 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 189 650067877 224 46.7 2 221 1 226 9.0e-60 223 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067878 457 36.57 150 455 34 333 2.0e-45 176 COG0642 Signal transduction histidine kinase 336 650067879 326 15.52 62 322 5 279 3.0e-13 69.7 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650067883 383 33.63 19 359 1 335 1.0e-42 167 COG0628 Predicted PurR-regulated permease PerM 355 650067884 276 31.03 2 114 1 115 7.0e-16 77.9 COG0789 DNA-binding transcriptional regulator, MerR family 124 650067885 341 26.16 42 318 64 361 1.0e-29 123 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650067887 315 33.23 1 315 4 309 4.0e-46 178 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650067888 409 36.96 43 406 49 408 2.0e-67 250 COG2124 Cytochrome P450 411 650067891 195 56.78 1 195 1 199 3.0e-63 234 COG4430 Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family 200 650067892 123 52.03 1 123 1 123 4.0e-40 156 COG5646 Uncharacterized conserved protein YdhG, YjbR/CyaY-like superfamily, DUF1801 family 126 650067894 340 34.99 3 340 2 329 5.0e-65 241 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650067899 308 42.62 12 308 16 309 1.0e-75 276 COG4209 ABC-type polysaccharide transport system, permease component 309 650067900 298 29.62 16 297 13 281 5.0e-38 151 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650067901 486 20.88 4 361 2 349 3.0e-16 80.5 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650067903 231 41.67 5 230 2 226 2.0e-58 219 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067904 190 29.51 9 189 10 192 3.0e-29 121 COG3963 Phospholipid N-methyltransferase 194 650067906 213 34.16 12 211 11 212 5.0e-40 157 COG2345 Predicted transcriptional regulator, ArsR family 218 650067911 308 38.33 181 300 8 127 1.0e-20 94.2 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650067912 327 40.82 1 311 1 312 2.0e-85 309 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650067914 323 29.1 8 300 1 298 5.0e-48 185 COG0657 Acetyl esterase/lipase 312 650067915 326 43.12 1 324 1 315 5.0e-91 327 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650067917 274 32 47 271 14 225 3.0e-21 95.8 COG2801 Transposase InsO and inactivated derivatives 232 650067920 181 33.33 3 94 1 93 1.0e-08 53.1 COG1396 Transcriptional regulator, contains XRE-family HTH domain 120 650067921 297 23.26 67 279 30 213 7.0e-10 57.9 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650067923 285 20.14 1 283 39 298 5.0e-13 68.5 COG2267 Lysophospholipase, alpha-beta hydrolase superfamily 298 650067925 234 19.03 7 222 9 228 3.0e-11 62.2 COG1018 Ferredoxin-NADP reductase 266 650067926 273 28.25 1 268 1 264 6.0e-41 161 COG0300 Short-chain dehydrogenase 265 650067927 189 27.59 1 145 3 147 8.0e-14 70.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650067928 192 32.22 1 172 20 199 1.0e-25 109 COG3896 Chloramphenicol 3-O-phosphotransferase 205 650067931 529 33.33 7 500 25 517 7.0e-85 308 COG0737 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family 517 650067932 268 35.82 1 267 18 283 3.0e-49 188 COG3639 ABC-type phosphate/phosphonate transport system, permease component 283 650067933 271 33.7 1 271 7 282 1.0e-50 193 COG3639 ABC-type phosphate/phosphonate transport system, permease component 283 650067934 261 54.69 1 256 3 258 6.0e-91 327 COG3638 ABC-type phosphate/phosphonate transport system, ATPase component 258 650067935 378 24.3 57 376 23 297 2.0e-32 133 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component 299 650067938 435 27.63 12 163 6 149 1.0e-17 84.4 COG3832 Uncharacterized conserved protein YndB, AHSA1/START domain 149 650067940 106 41.3 5 94 19 110 9.0e-08 48.7 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650067942 157 26.71 12 157 1 137 1.0e-20 92.8 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase 138 650067944 150 18.32 14 143 15 122 8.0e-03 33.3 COG3324 Predicted enzyme related to lactoylglutathione lyase 127 650067945 188 20 1 167 3 162 7.0e-06 44 COG0406 Broad specificity phosphatase PhoE 208 650067950 225 38.67 4 222 2 224 1.0e-49 189 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650067952 415 24.68 32 410 10 386 2.0e-20 93.7 COG2814 Predicted arabinose efflux permease, MFS family 394 650067953 279 44.89 1 272 1 268 2.0e-78 286 COG3546 Mn-containing catalase (includes spore coat protein CotJC) 277 650067956 322 35.71 1 298 4 311 4.0e-65 242 COG2055 Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family 349 650067958 229 27.8 19 213 3 196 4.0e-10 58.4 COG0702 Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains 275 650067959 278 29.44 38 275 21 258 3.0e-30 125 COG2819 Predicted hydrolase of the alpha/beta superfamily 264 650067960 168 27.68 7 118 1 112 7.0e-17 80.2 COG0789 DNA-binding transcriptional regulator, MerR family 124 650067963 327 40.75 1 314 1 315 2.0e-83 303 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650067964 293 25.94 1 289 1 289 8.0e-34 137 COG0583 DNA-binding transcriptional regulator, LysR family 297 650067969 863 27.99 11 861 7 889 3.0e-90 326 COG2909 ATP-, maltotriose- and DNA-dependent transcriptional regulator MalT 894 650067970 448 35.88 15 302 9 306 8.0e-55 208 COG3397 Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains 308 650067972 150 28.1 10 130 2 122 1.0e-11 62.3 COG1846 DNA-binding transcriptional regulator, MarR family 126 650067975 379 36.81 1 379 1 350 1.0e-80 293 COG1063 Threonine dehydrogenase or related Zn-dependent dehydrogenase 350 650067976 128 36.19 1 105 43 145 3.0e-16 77.7 COG5577 Spore coat protein CotF 145 650067979 622 43.87 351 619 8 258 2.0e-54 207 COG1240 Mg-chelatase subunit ChlD 261 650067980 307 46.92 1 302 7 347 4.0e-89 321 COG1239 Mg-chelatase subunit ChlI 423 650067981 261 48.81 3 253 2 253 2.0e-86 312 COG1120 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component 258 650067982 349 28.36 15 347 2 319 7.0e-39 154 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650067983 399 40.32 11 381 1 323 3.0e-86 312 COG0523 GTPase, G3E family 323 650067984 149 26.39 4 144 2 145 4.0e-20 90.8 COG0735 Fe2+ or Zn2+ uptake regulation protein 145 650067985 89 61.82 35 89 7 61 2.0e-16 77.2 COG0199 Ribosomal protein S14 61 650067986 363 35.28 5 363 3 303 1.0e-75 277 COG0803 ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA 303 650067987 288 41.29 1 264 6 269 1.0e-43 170 COG1108 ABC-type Mn2+/Zn2+ transport system, permease component 274 650067988 235 42.24 1 230 2 231 5.0e-70 257 COG1121 ABC-type Mn2+/Zn2+ transport system, ATPase component 254 650067992 84 39.29 1 83 1 72 4.0e-15 73 COG0254 Ribosomal protein L31 75 650067993 337 30.49 41 333 9 313 4.0e-45 175 COG0701 Uncharacterized membrane protein YraQ, UPF0718 family 317 650067994 306 26.39 13 296 2 269 8.0e-33 134 COG3689 Uncharacterized membrane protein YcgQ, UPF0703/DUF1980 family 271 650067995 108 46.08 1 99 1 101 2.0e-24 104 COG4817 DNA-binding ferritin-like protein (Dps family) 111 650067996 115 48.67 2 114 1 111 2.0e-30 123 COG4817 DNA-binding ferritin-like protein (Dps family) 111 650067997 334 24.19 1 331 117 407 1.0e-21 97.2 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase 409 650067999 426 45.05 4 312 3 310 3.0e-65 242 COG0331 Malonyl CoA-acyl carrier protein transacylase 310 650068000 222 37.67 2 215 23 233 4.0e-45 174 COG3208 Surfactin synthase thioesterase subunit 244 650068010 2172 37.44 907 1562 1 642 6.0e-129 457 COG1020 Non-ribosomal peptide synthetase component F 642 650068011 127 65.08 2 127 1 126 9.0e-46 175 COG0853 Aspartate 1-decarboxylase 126 650068012 353 21.58 1 290 1 287 5.0e-20 92.5 COG0463 Glycosyltransferase involved in cell wall bisynthesis 291 650068013 317 34.75 1 304 1 290 5.0e-58 218 COG1131 ABC-type multidrug transport system, ATPase component 293 650068014 277 21.6 30 277 35 284 9.0e-06 44.5 COG0842 ABC-type multidrug transport system, permease component 286 650068015 201 25.73 1 200 63 261 5.0e-22 97.9 COG0561 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases 264 650068017 326 50.49 5 312 4 266 3.0e-96 345 COG4608 ABC-type oligopeptide transport system, ATPase component 309 650068018 331 54.4 5 320 1 315 5.0e-123 434 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 316 650068019 272 47.74 9 272 21 286 9.0e-70 257 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650068020 314 44.3 1 314 2 317 4.0e-81 295 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650068021 244 29.25 1 244 2 291 1.0e-40 160 COG1234 Ribonuclease BN, tRNA processing enzyme 292 650068022 285 29.39 1 274 2 279 4.0e-42 165 COG1737 DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains 281 650068023 249 27.35 1 227 3 226 8.0e-23 100 COG1011 FMN phosphatase YigB, HAD superfamily 229 650068024 406 18.11 1 388 4 388 5.0e-06 46 COG2814 Predicted arabinose efflux permease, MFS family 394 650068025 248 42.06 1 248 3 248 5.0e-71 260 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 252 650068026 269 43.07 3 264 1 267 6.0e-83 300 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 316 650068027 295 42.91 1 273 12 286 2.0e-66 246 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650068028 310 38.75 1 309 1 316 3.0e-71 262 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650068029 432 45.79 1 428 1 426 0.0e+00 536 COG4408 Uncharacterized protein 431 650068031 293 20.82 5 275 1 272 5.0e-31 128 COG0253 Diaminopimelate epimerase 272 650068032 410 18.54 13 394 10 387 9.0e-06 45.2 COG2814 Predicted arabinose efflux permease, MFS family 394 650068033 255 42.13 1 251 2 249 1.0e-72 266 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 252 650068034 270 45.11 3 263 1 266 3.0e-84 305 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 316 650068035 293 44.16 1 272 13 286 2.0e-68 252 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650068036 309 40.94 1 309 1 317 2.0e-76 279 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650068037 538 26.85 9 538 7 555 9.0e-76 277 COG0747 ABC-type transport system, periplasmic component 556 650068039 195 27.27 7 193 13 193 9.0e-11 60.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068040 292 25.44 17 291 9 282 9.0e-18 84.4 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650068043 284 39.52 1 281 4 293 4.0e-62 231 COG1131 ABC-type multidrug transport system, ATPase component 293 650068044 210 21.46 1 205 1 201 8.0e-11 60.8 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068045 414 33.88 1 414 1 419 3.0e-46 179 COG0025 NhaP-type Na+/H+ or K+/H+ antiporter 429 650068047 474 29.74 72 463 80 489 1.0e-57 217 COG0168 Trk-type K+ transport system, membrane component 499 650068051 108 37.8 1 81 9 90 6.0e-11 59.1 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650068052 431 42.92 5 427 4 424 3.0e-93 336 COG1055 Na+/H+ antiporter NhaD or related arsenite permease 424 650068053 139 34.29 2 134 1 138 8.0e-35 139 COG0394 Protein-tyrosine-phosphatase 139 650068054 448 19.34 19 447 16 459 2.0e-37 150 COG0277 FAD/FMN-containing dehydrogenase 459 650068057 448 37.28 30 291 21 296 3.0e-50 192 COG3397 Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains 308 650068058 211 28.49 4 182 5 190 2.0e-25 108 COG0110 Acetyltransferase (isoleucine patch superfamily) 190 650068060 117 27.03 12 117 3 109 4.0e-08 50.2 COG1695 DNA-binding transcriptional regulator, PadR family 138 650068062 249 19.91 28 246 44 258 1.0e-08 54 COG1682 ABC-type polysaccharide/polyol phosphate export permease 263 650068063 253 45.24 5 252 4 255 9.0e-66 243 COG1131 ABC-type multidrug transport system, ATPase component 293 650068064 114 41.44 4 111 2 111 2.0e-21 94.6 COG4817 DNA-binding ferritin-like protein (Dps family) 111 650068065 110 40 6 108 4 108 9.0e-18 82.2 COG1695 DNA-binding transcriptional regulator, PadR family 138 650068067 113 53 14 113 9 107 3.0e-30 123 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650068068 229 31.46 1 89 9 97 4.0e-09 55.2 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650068069 206 22.58 13 195 9 172 9.0e-19 86.9 COG1853 NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family 176 650068070 309 34.22 1 300 1 297 1.0e-44 173 COG0583 DNA-binding transcriptional regulator, LysR family 297 650068071 339 28.61 3 313 17 349 5.0e-45 175 COG2021 Homoserine acetyltransferase 368 650068073 231 46.26 6 230 3 226 7.0e-67 246 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650068075 435 19.78 1 435 2 432 2.0e-28 120 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650068076 385 18.96 10 385 6 368 7.0e-14 72.1 COG0845 Multidrug efflux pump subunit AcrA (membrane-fusion protein) 372 650068077 292 33 1 291 3 281 5.0e-46 178 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068078 288 33.67 1 287 1 294 5.0e-46 178 COG1175 ABC-type sugar transport system, permease component 295 650068080 575 33.68 1 566 1 573 5.0e-122 431 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 573 650068081 598 36.63 19 593 2 558 1.0e-130 460 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 559 650068082 337 23.32 1 337 5 345 2.0e-41 163 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 346 650068083 455 35.82 4 447 3 456 8.0e-105 374 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 457 650068088 303 27.36 14 303 33 299 1.0e-24 107 COG1073 Fermentation-respiration switch protein FrsA, has esterase activity, DUF1100 family 299 650068089 181 20.78 1 154 3 156 2.0e-09 55.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068090 267 46.07 1 266 3 268 3.0e-61 228 COG1968 Undecaprenyl pyrophosphate phosphatase UppP 270 650068091 127 25.83 8 126 15 124 1.0e-06 45.7 COG3324 Predicted enzyme related to lactoylglutathione lyase 127 650068092 92 33.71 4 92 14 96 1.0e-05 41.7 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650068093 869 23.46 1 863 1 740 2.0e-121 430 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 740 650068095 159 23.78 4 159 3 157 2.0e-04 38.8 COG3708 Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain 157 650068096 320 21.74 1 316 4 303 1.0e-18 87 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650068100 214 39.23 1 209 4 211 2.0e-49 189 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 211 650068101 369 44.9 9 367 2 353 2.0e-90 326 COG0079 Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase 356 650068102 287 39.79 7 285 5 288 3.0e-68 252 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 299 650068105 355 34.81 2 355 1 356 1.0e-72 267 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 357 650068106 473 18.32 10 452 3 457 6.0e-38 152 COG0277 FAD/FMN-containing dehydrogenase 459 650068109 212 26.07 7 211 2 204 3.0e-29 121 COG0778 Nitroreductase 207 650068110 119 31.97 1 119 1 120 9.0e-13 65.5 COG0789 DNA-binding transcriptional regulator, MerR family 124 650068111 320 43.58 1 317 1 332 6.0e-67 247 COG2070 NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family 336 650068112 266 31.27 5 263 1 248 6.0e-26 111 COG0619 Energy-coupling factor transporter transmembrane protein EcfT 252 650068113 282 38.56 1 235 2 235 8.0e-53 200 COG1122 Energy-coupling factor transporter ATP-binding protein EcfA2 235 650068114 269 44.25 1 224 3 228 1.0e-65 243 COG1122 Energy-coupling factor transporter ATP-binding protein EcfA2 235 650068115 275 35.48 1 241 4 248 2.0e-41 163 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650068118 383 41.77 1 380 1 390 2.0e-81 296 COG0183 Acetyl-CoA acetyltransferase 392 650068119 497 31.14 1 494 11 527 5.0e-88 318 COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II 534 650068120 184 48.35 1 182 5 184 8.0e-30 123 COG1268 Biotin transporter BioY 184 650068121 319 16.8 40 277 30 233 5.0e-10 58.7 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650068123 179 31.1 1 163 3 162 2.0e-24 105 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650068124 134 25.23 21 124 15 121 2.0e-04 38 COG3631 Ketosteroid isomerase-related protein 133 650068126 300 31.29 1 291 1 292 4.0e-42 165 COG0583 DNA-binding transcriptional regulator, LysR family 297 650068127 168 35 32 130 9 104 7.0e-07 47.3 COG4270 Uncharacterized membrane protein 131 650068128 383 19.8 80 375 2 282 7.0e-17 82.1 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650068129 223 37.02 3 202 68 270 3.0e-39 155 COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 285 650068132 454 30.92 1 446 4 458 2.0e-94 340 COG1167 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain 459 650068133 269 41.77 28 269 7 254 7.0e-62 230 COG2602 Beta-lactamase class D 254 650068135 161 28.95 1 152 1 136 3.0e-30 124 COG1959 DNA-binding transcriptional regulator, IscR family 150 650068138 231 31.77 3 190 2 192 4.0e-31 128 COG0300 Short-chain dehydrogenase 265 650068140 300 33.44 1 295 2 293 6.0e-60 224 COG1131 ABC-type multidrug transport system, ATPase component 293 650068141 308 31.27 1 300 2 293 2.0e-56 212 COG1131 ABC-type multidrug transport system, ATPase component 293 650068142 214 22 15 214 7 196 2.0e-11 62.7 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068146 292 24.22 7 290 3 280 5.0e-26 112 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650068148 304 34.31 1 302 1 293 3.0e-64 238 COG1131 ABC-type multidrug transport system, ATPase component 293 650068149 312 28.48 2 309 39 329 6.0e-32 131 COG0642 Signal transduction histidine kinase 336 650068150 232 40.43 3 230 1 225 1.0e-61 229 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650068152 408 22.94 6 392 15 404 7.0e-20 92.2 COG0738 Fucose permease 422 650068155 375 17.86 9 366 18 381 2.0e-16 80.2 COG2814 Predicted arabinose efflux permease, MFS family 394 650068157 288 33.57 1 277 2 287 3.0e-57 215 COG1131 ABC-type multidrug transport system, ATPase component 293 650068158 98 39.58 1 96 29 124 2.0e-15 74.1 COG1725 DNA-binding transcriptional regulator YhcF, GntR family 125 650068159 335 36.18 1 332 1 326 8.0e-69 254 COG0604 NADPH:quinone reductase or related Zn-dependent oxidoreductase 326 650068160 108 35.71 18 101 18 100 8.0e-07 45.6 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650068161 303 33.12 1 302 5 310 2.0e-45 175 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650068162 135 31.4 7 127 4 121 3.0e-19 87.6 COG3682 Predicted transcriptional regulator 123 650068163 637 25.64 7 388 3 337 2.0e-35 144 COG4219 Signal transducer regulating beta-lactamase production, contains metallopeptidase domain 337 650068164 136 33.33 7 126 4 120 4.0e-19 86.8 COG3682 Predicted transcriptional regulator 123 650068166 267 22.54 4 265 13 276 2.0e-27 116 COG1562 Phytoene/squalene synthetase 288 650068168 187 15.98 1 169 1 167 2.0e-05 42.7 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068170 235 23.64 23 232 15 230 1.0e-21 96.9 COG1018 Ferredoxin-NADP reductase 266 650068171 751 46.21 130 751 262 930 0.0e+00 790 COG0178 Excinuclease UvrABC ATPase subunit 935 650068172 132 23.08 1 131 6 148 2.0e-13 68.2 COG3832 Uncharacterized conserved protein YndB, AHSA1/START domain 149 650068173 109 37.8 1 82 9 90 2.0e-08 51.3 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650068176 276 39.15 2 275 1 281 4.0e-61 228 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068177 294 37.76 7 291 5 290 5.0e-55 208 COG1175 ABC-type sugar transport system, permease component 295 650068178 432 20.19 26 432 19 431 1.0e-27 117 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650068182 183 30.73 1 178 2 179 5.0e-26 110 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650068183 279 22.74 30 277 53 311 2.0e-29 122 COG1262 Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain 314 650068186 487 27.24 194 486 27 325 2.0e-31 130 COG3469 Chitinase 332 650068190 288 36.07 12 287 8 281 4.0e-48 185 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068191 290 36.21 1 286 13 301 2.0e-58 219 COG4209 ABC-type polysaccharide transport system, permease component 309 650068192 473 21.1 5 468 2 428 8.0e-21 95.5 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650068193 334 36.9 2 331 1 330 1.0e-64 240 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650068195 206 22.67 12 183 10 179 1.0e-08 53.5 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068196 454 31.17 6 451 12 453 3.0e-58 219 COG0534 Na+-driven multidrug efflux pump 455 650068198 267 32.32 5 267 1 260 7.0e-33 134 COG3694 ABC-type uncharacterized transport system, permease component 260 650068199 264 30.42 2 264 8 268 1.0e-31 130 COG4587 ABC-type uncharacterized transport system, permease component 268 650068200 327 44.55 4 324 4 324 6.0e-93 334 COG4586 ABC-type uncharacterized transport system, ATPase component 325 650068201 391 22.38 53 383 18 317 5.0e-20 92.4 COG0641 Sulfatase maturation enzyme AslB, radical SAM superfamily 378 650068207 694 23.68 259 676 10 407 4.0e-34 140 COG0840 Methyl-accepting chemotaxis protein 408 650068208 422 22.45 28 320 92 350 1.0e-21 97.8 COG2273 Beta-glucanase, GH16 family 355 650068211 175 52.66 1 168 6 174 2.0e-61 228 COG0225 Peptide methionine sulfoxide reductase MsrA 174 650068212 455 31.83 130 439 35 330 3.0e-40 159 COG0642 Signal transduction histidine kinase 336 650068213 225 42.57 5 201 1 201 2.0e-49 189 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650068216 189 20.11 11 175 15 195 2.0e-06 46.1 COG4430 Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family 200 650068217 89 40.45 1 89 1 88 1.0e-16 77.9 COG1925 Phosphotransferase system, HPr and related phosphotransfer proteins 88 650068218 244 54.73 1 243 1 243 2.0e-88 318 COG4821 Uncharacterized protein, contains SIS (Sugar ISomerase) phosphosugar binding domain 243 650068219 242 39.43 1 237 2 243 6.0e-52 197 COG1402 Creatinine amidohydrolase/Fe(II)-dependent formamide hydrolase involved in riboflavin and F420 biosynthesis 250 650068220 330 38.39 1 330 1 316 1.0e-98 353 COG1735 Predicted metal-dependent hydrolase, phosphotriesterase family 316 650068221 431 39.78 1 431 5 448 2.0e-107 382 COG3037 Ascorbate-specific PTS system EIIC-type component UlaA 481 650068222 87 42.22 1 87 2 91 4.0e-17 79.5 COG3414 Phosphotransferase system, galactitol-specific IIB component 93 650068223 147 32.19 1 142 3 146 8.0e-23 99.7 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 152 650068224 235 42.36 7 233 3 229 2.0e-62 232 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650068225 482 27.71 134 482 2 330 4.0e-38 152 COG0642 Signal transduction histidine kinase 336 650068226 254 48.64 8 225 1 220 3.0e-69 255 COG1136 ABC-type lipoprotein export system, ATPase component 226 650068231 200 26.4 6 179 5 182 8.0e-25 107 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650068232 69 50 3 64 12 73 4.0e-13 66.5 COG4224 Uncharacterized protein YnzC, UPF0291/DUF896 family 77 650068233 498 28.62 1 492 1 509 4.0e-86 312 COG0488 ATPase components of ABC transporters with duplicated ATPase domains 530 650068236 369 40.5 2 359 1 357 2.0e-83 302 COG0371 Glycerol dehydrogenase or related enzyme, iron-containing ADH family 360 650068237 273 23.49 138 268 10 158 5.0e-09 55 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650068238 490 25.9 45 436 51 440 3.0e-38 153 COG3119 Arylsulfatase A or related enzyme 475 650068239 305 38.94 2 304 1 303 6.0e-69 254 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 308 650068241 295 34.65 193 293 19 119 3.0e-20 93 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650068244 255 46.27 3 252 1 250 3.0e-44 172 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650068245 623 22.12 91 610 19 455 1.0e-35 145 COG2972 Sensor histidine kinase YesM 456 650068248 526 22.02 1 383 1 349 4.0e-22 99.7 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650068249 290 34.83 6 289 5 281 2.0e-48 186 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068250 319 47.68 18 319 8 309 1.0e-91 330 COG4209 ABC-type polysaccharide transport system, permease component 309 650068251 60 30.91 1 54 1 55 3.0e-05 39.9 COG1942 Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family 69 650068253 765 61.03 428 758 1 329 2.0e-124 440 COG0620 Methionine synthase II (cobalamin-independent) 330 650068255 230 44.05 4 228 3 228 3.0e-60 225 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650068256 281 20.69 1 276 3 274 2.0e-21 96.4 COG1082 Sugar phosphate isomerase/epimerase 274 650068257 357 27.37 5 352 1 342 4.0e-50 192 COG0673 Predicted dehydrogenase 342 650068258 339 56.53 11 339 11 336 2.0e-89 323 COG4211 ABC-type glucose/galactose transport system, permease component 336 650068259 332 27.8 46 318 36 312 3.0e-27 116 COG1879 ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain 322 650068260 544 27.29 1 539 1 471 6.0e-63 235 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650068261 438 28.74 2 431 22 453 5.0e-51 195 COG0534 Na+-driven multidrug efflux pump 455 650068262 386 66.67 5 384 13 393 0.0e+00 574 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 394 650068263 297 38.14 6 292 4 290 6.0e-65 240 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 299 650068268 173 35.16 1 171 3 184 2.0e-27 115 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650068269 760 32.78 27 370 48 388 9.0e-61 228 COG1472 Periplasmic beta-glucosidase and related glycosidases 397 650068270 423 42.86 310 414 22 126 2.0e-23 104 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650068271 390 31.39 74 374 1 306 8.0e-47 181 COG1940 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 314 650068273 397 23 8 392 13 419 9.0e-25 107 COG0738 Fucose permease 422 650068276 543 21.09 1 530 1 636 6.0e-39 155 COG0210 Superfamily I DNA or RNA helicase 655 650068277 599 23.68 1 436 1 458 3.0e-34 140 COG3593 Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains 581 650068286 239 51.46 4 239 6 241 3.0e-79 288 COG0217 Transcriptional and/or translational regulatory protein YebC/TACO1 241 650068287 402 21.9 55 397 61 393 2.0e-07 50.6 COG2814 Predicted arabinose efflux permease, MFS family 394 650068288 574 42.37 15 570 7 510 0.0e+00 553 COG0155 Sulfite reductase, beta subunit (hemoprotein) 510 650068289 610 51.51 14 610 1 587 0.0e+00 663 COG0369 Sulfite reductase, alpha subunit (flavoprotein) 587 650068291 218 33.03 5 218 13 226 2.0e-38 152 COG2120 N-acetylglucosaminyl deacetylase, LmbE family 237 650068293 163 45.64 1 147 5 150 7.0e-39 153 COG1683 Uncharacterized conserved protein YbbK, DUF523 family 156 650068294 265 40 9 113 22 126 8.0e-19 87.6 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650068295 362 31.94 2 356 1 340 2.0e-51 196 COG0673 Predicted dehydrogenase 342 650068296 316 34.17 192 311 2 120 1.0e-17 84.1 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650068297 332 27.86 1 329 3 342 8.0e-42 164 COG0673 Predicted dehydrogenase 342 650068301 248 33 8 107 3 102 7.0e-15 74.4 COG0789 DNA-binding transcriptional regulator, MerR family 124 650068302 308 29.61 3 305 1 280 3.0e-46 179 COG5504 Uncharacterized protein YjaZ 280 650068305 213 32.23 1 205 2 212 5.0e-46 177 COG1131 ABC-type multidrug transport system, ATPase component 293 650068307 246 30.33 3 246 5 229 3.0e-16 78.9 COG2801 Transposase InsO and inactivated derivatives 232 650068308 107 23.71 9 102 6 102 1.0e-04 38.7 COG2963 Transposase and inactivated derivatives 116 650068314 381 28.29 33 379 1 333 8.0e-45 174 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650068317 980 30.58 14 977 49 943 0.0e+00 488 COG0383 Alpha-mannosidase 943 650068318 308 47 9 308 10 309 2.0e-89 322 COG4209 ABC-type polysaccharide transport system, permease component 309 650068319 298 29.7 1 297 3 281 2.0e-44 173 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068320 552 18.51 5 413 1 374 3.0e-13 70.4 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650068325 124 31.48 8 113 3 110 2.0e-10 58.3 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650068326 160 27.56 3 152 5 147 2.0e-12 65.5 COG3832 Uncharacterized conserved protein YndB, AHSA1/START domain 149 650068327 180 17.61 8 180 12 184 2.0e-08 52.3 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650068330 316 36.82 19 314 1 292 2.0e-55 209 COG1175 ABC-type sugar transport system, permease component 295 650068331 289 36.79 12 288 3 281 1.0e-52 200 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068332 459 22.37 1 454 2 429 2.0e-20 94.3 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650068333 618 28.84 93 614 1 514 5.0e-60 226 COG1657 Squalene cyclase 517 650068338 481 21.87 17 375 4 321 4.0e-27 116 COG2312 Erythromycin esterase homolog 405 650068342 197 22.73 1 175 4 179 9.0e-07 47 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068344 280 31 1 270 1 297 2.0e-35 143 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650068345 271 24.32 34 138 10 120 1.0e-03 37.3 COG1396 Transcriptional regulator, contains XRE-family HTH domain 120 650068347 278 37.77 7 277 6 281 2.0e-47 183 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068348 302 36.82 1 292 2 290 5.0e-42 165 COG1175 ABC-type sugar transport system, permease component 295 650068360 299 24.1 1 298 1 307 3.0e-41 162 COG0657 Acetyl esterase/lipase 312 650068363 319 36.36 198 318 2 122 3.0e-20 92.6 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650068372 286 29.79 1 284 1 290 1.0e-36 147 COG0583 DNA-binding transcriptional regulator, LysR family 297 650068374 129 42.52 1 126 3 126 8.0e-27 112 COG0251 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family 130 650068377 203 49.74 11 203 7 188 2.0e-48 185 COG3644 Uncharacterized protein 194 650068379 297 25.33 1 295 2 281 1.0e-19 90.9 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650068380 198 21.61 1 198 2 198 5.0e-10 58.1 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068381 306 27.02 55 297 31 271 7.0e-30 124 COG3735 Uncharacterized conserved protein YbaP, TraB family 299 650068382 314 16.78 9 296 6 278 2.0e-06 46.6 COG3595 Uncharacterized conserved protein YvlB, contains DUF4097 and DUF4098 domains 318 650068389 219 17.91 1 201 1 197 3.0e-09 55.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068391 231 39.47 1 223 1 227 8.0e-53 200 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650068392 382 33.44 70 374 26 327 9.0e-44 171 COG0642 Signal transduction histidine kinase 336 650068394 120 31.09 4 118 18 130 2.0e-10 58 COG0251 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family 130 650068395 505 31.73 1 344 1 350 3.0e-53 203 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 387 650068396 161 24.47 47 140 17 110 3.0e-07 48.4 COG1846 DNA-binding transcriptional regulator, MarR family 126 650068401 181 22.67 1 150 3 151 1.0e-08 53.1 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068405 205 21.47 21 203 4 194 1.0e-09 57 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068406 308 24.92 1 300 1 292 2.0e-25 110 COG1893 Ketopantoate reductase 307 650068408 269 31.75 20 269 1 231 1.0e-19 90.8 COG2801 Transposase InsO and inactivated derivatives 232 650068411 332 25.16 26 327 20 330 1.0e-34 140 COG2141 Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) 336 650068412 160 28.57 1 154 1 150 1.0e-21 96.2 COG1959 DNA-binding transcriptional regulator, IscR family 150 650068413 216 39.11 4 205 1 200 5.0e-49 187 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650068414 1015 34.3 284 626 1 336 4.0e-45 177 COG0642 Signal transduction histidine kinase 336 650068418 399 34.17 11 397 25 411 4.0e-76 278 COG2124 Cytochrome P450 411 650068423 416 22.92 10 357 1 344 9.0e-19 88.3 COG2814 Predicted arabinose efflux permease, MFS family 394 650068426 214 69 1 100 1 100 7.0e-42 163 COG0831 Urease gamma subunit 100 650068427 570 71.23 1 569 1 567 0.0e+00 952 COG0804 Urease alpha subunit 568 650068429 603 30 21 213 30 219 2.0e-28 121 COG1418 HD superfamily phosphodieaserase, includes HD domain of RNase Y 222 650068430 440 21.7 203 414 1 211 2.0e-19 91 COG0463 Glycosyltransferase involved in cell wall bisynthesis 291 650068433 821 27.06 412 660 3 253 3.0e-36 147 COG1216 Glycosyltransferase, GT2 family 305 650068436 317 16.2 61 317 97 379 3.0e-13 69.7 COG0438 Glycosyltransferase involved in cell wall bisynthesis 381 650068438 175 36.26 1 175 3 184 1.0e-27 116 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650068439 300 36.1 6 281 16 274 1.0e-38 153 COG1108 ABC-type Mn2+/Zn2+ transport system, permease component 274 650068440 312 39.07 1 279 5 273 2.0e-43 169 COG1108 ABC-type Mn2+/Zn2+ transport system, permease component 274 650068442 312 35.37 1 309 5 303 6.0e-56 211 COG0803 ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA 303 650068448 130 24.58 12 123 16 121 4.0e-03 33.7 COG3324 Predicted enzyme related to lactoylglutathione lyase 127 650068449 109 29.57 1 108 10 123 2.0e-11 60.7 COG0073 tRNA-binding EMAP/Myf domain 123 650068454 310 47.08 11 310 2 309 1.0e-91 329 COG0039 Malate/lactate dehydrogenase 313 650068455 195 28.5 3 193 6 205 2.0e-18 85.7 COG1280 Threonine/homoserine/homoserine lactone efflux protein 208 650068456 184 24.27 7 108 1 103 1.0e-07 49.6 COG1396 Transcriptional regulator, contains XRE-family HTH domain 120 650068457 243 40.61 4 230 23 251 5.0e-46 177 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 258 650068458 258 44.98 10 258 4 243 2.0e-83 302 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 248 650068459 338 25.62 9 319 2 318 2.0e-25 109 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component 335 650068462 387 34.55 1 380 11 390 3.0e-57 216 COG2814 Predicted arabinose efflux permease, MFS family 394 650068463 137 32.8 10 132 9 126 2.0e-11 61.5 COG3607 Predicted lactoylglutathione lyase 133 650068464 419 37.09 18 410 4 393 2.0e-89 323 COG0436 Aspartate/methionine/tyrosine aminotransferase 393 650068465 610 25.47 71 479 36 433 7.0e-58 219 COG5520 O-Glycosyl hydrolase 433 650068466 211 29.63 4 191 2 180 5.0e-23 100 COG0655 Multimeric flavodoxin WrbA 207 650068467 216 33.95 2 215 4 217 6.0e-44 170 COG4845 Chloramphenicol O-acetyltransferase 219 650068469 206 29.38 1 190 2 191 2.0e-29 122 COG0406 Broad specificity phosphatase PhoE 208 650068473 184 33.33 5 174 17 180 2.0e-29 122 COG2320 GrpB domain, predicted nucleotidyltransferase, UPF0157 family 185 650068474 244 23.24 36 216 43 226 4.0e-16 78.8 COG2226 Ubiquinone/menaquinone biosynthesis C-methylase UbiE 238 650068476 504 28.86 26 362 52 390 7.0e-46 178 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650068478 367 27.46 25 298 11 289 7.0e-50 191 COG2008 Threonine aldolase 342 650068479 307 46.62 1 296 2 292 5.0e-78 284 COG1230 Co/Zn/Cd efflux system component 296 650068481 593 28.05 24 591 23 561 3.0e-85 309 COG4533 DNA-binding transcriptional regulator SgrR of sgrS sRNA, contains a MarR-type HTH domain and a periplasmic-type solute-binding domain 564 650068483 374 18.9 14 356 16 372 2.0e-04 40.6 COG0814 Amino acid permease 415 650068486 426 31.8 2 425 5 427 3.0e-76 279 COG0124 Histidyl-tRNA synthetase 429 650068487 688 57.83 18 515 1 489 0.0e+00 706 COG0753 Catalase 496 650068488 305 20.48 1 293 7 292 2.0e-03 36.8 COG0697 Permease of the drug/metabolite transporter (DMT) superfamily 292 650068489 129 46.51 1 129 2 129 1.0e-35 141 COG0509 Glycine cleavage system H protein (lipoate-binding) 131 650068493 364 44.41 2 364 94 448 3.0e-124 438 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain 450 650068498 261 32.16 8 259 4 258 9.0e-46 177 COG2162 Arylamine N-acetyltransferase 275 650068499 159 39.52 1 123 3 125 2.0e-35 142 COG0590 tRNA(Arg) A34 adenosine deaminase TadA 152 650068502 420 46.17 1 418 147 562 3.0e-113 402 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650068504 218 41.83 7 214 2 209 8.0e-53 200 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650068506 186 23.57 41 180 2 157 7.0e-16 77.2 COG1225 Peroxiredoxin 157 650068507 470 39.69 25 467 2 442 2.0e-99 356 COG3182 Uncharacterized iron-regulated membrane protein 442 650068509 243 36.4 6 227 5 232 5.0e-56 210 COG1131 ABC-type multidrug transport system, ATPase component 293 650068510 273 20.44 8 269 7 274 7.0e-09 54.7 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 278 650068511 191 20.11 14 170 3 176 7.0e-04 37.7 COG4314 Nitrous oxide reductase accessory protein NosL 176 650068512 459 27.39 52 421 30 400 2.0e-42 167 COG3420 Nitrous oxidase accessory protein NosD, contains tandem CASH domains 408 650068514 620 24.19 1 614 1 561 3.0e-74 273 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650068515 574 31.5 7 571 11 567 2.0e-93 337 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650068520 727 23.01 9 726 7 749 8.0e-74 272 COG2409 Uncharacterized membrane protein YdfJ, MMPL/SSD domain 937 650068521 207 20.73 10 201 1 192 1.0e-07 50 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068522 211 31.13 8 211 4 207 3.0e-30 125 COG0778 Nitroreductase 207 650068523 152 25.37 21 152 5 135 3.0e-15 74.6 COG1959 DNA-binding transcriptional regulator, IscR family 150 650068524 667 38.35 1 401 6 403 5.0e-73 269 COG0025 NhaP-type Na+/H+ or K+/H+ antiporter 429 650068525 237 41.67 1 235 17 251 2.0e-36 146 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650068526 202 15.73 3 180 1 178 8.0e-10 57.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068527 251 42.46 3 248 2 250 5.0e-53 201 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650068530 278 35 150 269 1 120 3.0e-22 99.2 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650068533 443 24.31 10 257 12 258 7.0e-25 108 COG2819 Predicted hydrolase of the alpha/beta superfamily 264 650068536 335 28.11 96 330 1 248 5.0e-26 112 COG2365 Protein tyrosine/serine phosphatase 249 650068537 279 31.95 8 269 13 276 1.0e-41 163 COG3639 ABC-type phosphate/phosphonate transport system, permease component 283 650068538 263 37.08 1 263 16 282 5.0e-47 181 COG3639 ABC-type phosphate/phosphonate transport system, permease component 283 650068539 208 55.9 1 195 1 195 5.0e-74 270 COG3638 ABC-type phosphate/phosphonate transport system, ATPase component 258 650068540 307 36.75 9 302 2 299 6.0e-53 201 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component 299 650068541 217 30.52 1 213 12 220 3.0e-21 95.5 COG1802 DNA-binding transcriptional regulator, GntR family 230 650068542 217 31.94 3 213 3 218 2.0e-31 129 COG1451 Predicted metal-dependent hydrolase 223 650068544 271 43.49 9 271 5 265 2.0e-44 172 COG0428 Zinc transporter ZupT 266 650068546 484 42.11 8 480 2 472 0.0e+00 463 COG1012 Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase 472 650068549 326 35.58 3 323 4 308 3.0e-60 225 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650068551 211 22.89 3 203 7 206 9.0e-25 106 COG0586 Uncharacterized membrane protein DedA, SNARE-associated domain 208 650068552 412 21.29 8 363 1 344 2.0e-34 140 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 357 650068553 187 25.62 16 170 48 207 5.0e-09 54.5 COG0586 Uncharacterized membrane protein DedA, SNARE-associated domain 208 650068555 215 37.96 1 212 1 216 9.0e-49 186 COG0637 Beta-phosphoglucomutase or related phosphatase, HAD superfamily 221 650068556 130 29.73 57 130 1 68 6.0e-09 53.5 COG3478 Predicted nucleic-acid-binding protein, contains Zn-ribbon domain 68 650068558 223 30 4 222 13 227 6.0e-26 111 COG1011 FMN phosphatase YigB, HAD superfamily 229 650068560 194 23.84 19 189 8 170 2.0e-14 72.3 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650068562 180 38.41 17 179 18 180 4.0e-25 107 COG2320 GrpB domain, predicted nucleotidyltransferase, UPF0157 family 185 650068564 177 28.39 23 174 26 180 1.0e-20 93.1 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650068566 388 17.46 133 373 23 258 6.0e-05 42.3 COG1409 3',5'-cyclic AMP phosphodiesterase CpdA 301 650068567 133 29.55 1 131 5 132 3.0e-14 71.1 COG5341 Uncharacterized protein 132 650068573 201 34.93 2 201 1 209 3.0e-44 171 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650068574 373 27.79 6 364 1 365 9.0e-45 174 COG4585 Signal transduction histidine kinase 365 650068575 377 26.2 5 368 10 378 5.0e-53 202 COG2311 Uncharacterized membrane protein YeiB 394 650068576 484 30.09 4 478 7 571 1.0e-86 314 COG1966 Carbon starvation protein CstA 575 650068577 245 39.92 5 245 2 243 5.0e-46 177 COG3279 DNA-binding response regulator, LytR/AlgR family 244 650068578 583 39.9 1 574 1 550 0.0e+00 503 COG3275 Sensor histidine kinase, LytS/YehU family 557 650068583 200 16.58 1 196 3 201 7.0e-13 67.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650068584 467 27.6 1 440 1 411 1.0e-61 231 COG2124 Cytochrome P450 411 650068591 185 31.32 9 185 4 185 2.0e-25 108 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650068593 237 54.46 14 237 13 236 2.0e-74 272 COG3826 Uncharacterized protein 236 650068594 181 44.74 22 170 17 168 1.0e-41 162 COG0350 O6-methylguanine-DNA--protein-cysteine methyltransferase 168 650068595 200 40.11 1 182 1 180 3.0e-53 201 COG2169 Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains 187 650068601 247 21.8 9 238 26 272 3.0e-11 62.7 COG3173 Predicted kinase, aminoglycoside phosphotransferase (APT) family 321 650068603 125 37.38 5 111 2 106 2.0e-19 87.8 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650068607 321 41.19 2 311 1 316 3.0e-70 258 COG3940 Beta-xylosidase, GH43 family 324 650068610 279 36.3 1 278 3 281 3.0e-55 208 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068611 326 37.46 38 326 5 294 2.0e-63 235 COG1175 ABC-type sugar transport system, permease component 295 650068612 455 23.82 44 452 23 432 9.0e-34 138 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650068613 307 40.52 2 306 3 306 3.0e-80 291 COG4189 Predicted transcriptional regulator 308 650068616 264 32.71 3 260 1 251 1.0e-39 156 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650068617 281 53.52 5 281 1 280 2.0e-103 369 COG0656 Aldo/keto reductase, related to diketogulonate reductase 280 650068618 401 44.59 5 391 8 391 2.0e-73 269 COG2814 Predicted arabinose efflux permease, MFS family 394 650068619 132 40.52 1 116 4 119 5.0e-31 126 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650068620 331 24.68 31 327 11 318 8.0e-33 134 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650068621 571 43.61 1 571 3 567 0.0e+00 504 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650068622 344 42.47 14 344 1 331 9.0e-62 230 COG0609 ABC-type Fe3+-siderophore transport system, permease component 334 650068623 351 43.77 28 350 6 332 7.0e-58 217 COG0609 ABC-type Fe3+-siderophore transport system, permease component 334 650068624 299 37.77 30 299 5 281 2.0e-50 192 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068625 296 35.27 6 296 3 294 4.0e-56 211 COG1175 ABC-type sugar transport system, permease component 295 650068626 452 32.62 47 450 24 433 2.0e-48 186 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650068627 443 29.02 21 409 19 425 2.0e-49 190 COG0038 H+/Cl- antiporter ClcA 443 650068629 295 29.62 5 279 4 290 2.0e-47 182 COG1131 ABC-type multidrug transport system, ATPase component 293 650068630 122 30.33 1 122 2 122 2.0e-22 97.6 COG1725 DNA-binding transcriptional regulator YhcF, GntR family 125 650068632 674 21.43 17 251 29 227 5.0e-06 46.8 COG2339 Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family 274 650068634 216 44.12 3 206 2 201 3.0e-56 211 COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 207 650068635 251 57.37 1 251 1 251 1.0e-93 336 COG1540 Lactam utilization protein B (function unknown) 252 650068636 356 44.97 3 320 1 304 1.0e-95 343 COG1984 Allophanate hydrolase subunit 2 314 650068637 241 45.89 9 236 3 221 2.0e-66 245 COG2049 Allophanate hydrolase subunit 1 223 650068640 167 20.77 1 164 2 184 4.0e-06 44.5 COG1011 FMN phosphatase YigB, HAD superfamily 229 650068641 243 24.61 1 189 1 152 4.0e-09 55.4 COG0622 Predicted phosphodiesterase 172 650068642 206 32.61 18 199 3 182 2.0e-29 122 COG1713 HD superfamily phosphohydrolase YqeK (fused to NMNAT in mycoplasms) 187 650068644 319 36.86 25 315 1 290 2.0e-56 213 COG1175 ABC-type sugar transport system, permease component 295 650068645 273 39.86 2 272 7 281 8.0e-51 193 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650068646 526 18.95 49 428 52 372 3.0e-13 70.6 COG2814 Predicted arabinose efflux permease, MFS family 394 650068648 409 43.7 7 408 3 384 3.0e-94 338 COG2309 Leucyl aminopeptidase (aminopeptidase T) 385 650068651 190 37.36 1 181 1 176 2.0e-36 145 COG3797 Uncharacterized conserved protein, DUF1697 family 178 650068652 463 32.6 2 456 6 444 8.0e-78 284 COG1232 Protoporphyrinogen oxidase 444 650068653 247 47.53 6 225 5 227 2.0e-63 236 COG2357 ppGpp synthetase catalytic domain (RelA/SpoT-type nucleotidyltranferase) 231 650068654 105 34.09 1 87 9 96 7.0e-09 52.5 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650068656 224 26.78 1 215 7 245 1.0e-25 109 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650068657 558 21.93 255 518 2 235 6.0e-29 122 COG3319 Thioesterase domain of type I polyketide synthase or non-ribosomal peptide synthetase 257 650068658 5441 30.41 3439 4500 1 1031 0.0e+00 738 COG3321 Acyl transferase domain in polyketide synthase (PKS) enzymes 1061 650068659 1939 31.23 1024 1888 1 855 0.0e+00 570 COG3321 Acyl transferase domain in polyketide synthase (PKS) enzymes 1061 650068663 192 20.2 1 192 3 175 2.0e-12 65.7 COG0250 Transcription antitermination factor NusG 178 650068664 582 26.26 15 212 1 171 2.0e-21 98.2 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650068666 456 26.63 29 423 4 336 3.0e-51 196 COG2141 Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) 336 650068667 269 47.64 15 268 5 258 1.0e-56 213 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 258 650068668 286 50.39 26 281 3 258 1.0e-61 230 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 258 650068669 339 30.35 1 339 1 330 1.0e-42 167 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component 335 650068670 258 52.21 6 251 4 248 2.0e-85 308 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 248 650068671 190 47.12 1 188 3 193 7.0e-65 240 COG1435 Thymidine kinase 201 650068673 288 44.65 14 280 13 283 2.0e-56 212 COG1284 Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains 289 650068676 216 29.03 15 200 33 218 2.0e-27 115 COG0398 Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain 223 650068680 137 46.02 3 115 1 113 7.0e-25 106 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit 113 650068681 97 46.59 1 88 2 89 1.0e-10 57.8 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit 89 650068682 159 45.57 1 158 1 158 3.0e-38 151 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit 158 650068683 494 33.86 1 492 1 499 1.0e-67 251 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 504 650068684 112 46.09 1 112 1 115 1.0e-24 104 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit 115 650068685 952 39.38 4 646 1 606 2.0e-128 453 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 606 650068687 208 28.8 11 200 18 208 5.0e-25 107 COG0586 Uncharacterized membrane protein DedA, SNARE-associated domain 208 650068690 336 22.18 82 334 46 258 2.0e-13 70.5 COG4278 Uncharacterized protein 269 650068694 114 37.86 11 108 1 103 2.0e-09 54.5 COG1695 DNA-binding transcriptional regulator, PadR family 138 650068695 345 45.51 1 324 3 333 1.0e-96 346 COG1902 2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family 363 650068696 144 26.36 18 127 1 106 2.0e-04 38.4 COG1846 DNA-binding transcriptional regulator, MarR family 126 650068697 197 28.35 1 190 71 264 5.0e-27 114 COG0561 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases 264 650068698 280 52.35 7 278 2 278 3.0e-90 325 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 283 650068699 338 33.55 46 337 17 317 7.0e-46 178 COG0701 Uncharacterized membrane protein YraQ, UPF0718 family 317 650068700 321 20.34 13 300 2 268 1.0e-26 114 COG3689 Uncharacterized membrane protein YcgQ, UPF0703/DUF1980 family 271 650068701 350 30.1 4 306 1 274 3.0e-42 166 COG0523 GTPase, G3E family 323 650068703 403 39.26 6 376 1 323 6.0e-87 314 COG0523 GTPase, G3E family 323 650068704 135 53.27 8 114 3 108 7.0e-32 129 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650068705 187 26.94 10 186 10 202 2.0e-34 138 COG0794 D-arabinose 5-phosphate isomerase GutQ 202 650068706 210 45.02 1 209 4 214 1.0e-53 203 COG0269 3-keto-L-gulonate-6-phosphate decarboxylase 217 650068707 322 48.71 14 322 13 313 1.0e-55 210 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component 316 650068708 326 31.21 35 313 33 314 1.0e-41 163 COG1879 ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain 322 650068709 539 26.78 1 531 1 473 2.0e-63 237 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650068710 180 34.25 1 179 1 178 2.0e-31 128 COG0431 NAD(P)H-dependent FMN reductase 184 650068712 186 29.78 1 175 1 176 3.0e-25 108 COG0431 NAD(P)H-dependent FMN reductase 184 650068713 222 48.87 2 222 1 209 1.0e-57 216 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650068717 496 31.84 7 488 4 473 2.0e-80 293 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase 475 650068718 592 29.47 20 589 14 566 2.0e-77 283 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650068722 103 55.24 1 103 1 105 1.0e-24 104 COG0393 Uncharacterized conserved protein YbjQ, UPF0145 family 108 650068723 142 59.57 1 141 1 141 3.0e-45 174 COG4154 L-fucose mutarotase/ribose pyranase, RbsD/FucU family 144 650068724 505 23.62 5 503 1 495 2.0e-68 253 COG1070 Sugar (pentulose or hexulose) kinase 502 650068725 219 33.49 1 210 3 216 1.0e-38 153 COG0235 Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase 219 650068726 597 37.74 15 595 1 470 1.0e-105 377 COG2407 L-fucose isomerase or related protein 470 650068727 285 39 182 281 24 123 8.0e-24 104 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650068728 128 35.23 39 126 12 99 3.0e-11 60.8 COG0633 Ferredoxin 102 650068732 317 40.69 5 316 1 305 2.0e-62 232 COG1940 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 314 650068733 228 42.33 1 213 2 214 9.0e-55 206 COG3142 Copper homeostasis protein CutC 241 650068734 486 37.18 52 483 70 484 9.0e-99 354 COG0260 Leucyl aminopeptidase 485 650068735 329 52.58 4 313 2 266 2.0e-106 379 COG4608 ABC-type oligopeptide transport system, ATPase component 309 650068736 334 59.25 5 322 1 314 0.0e+00 466 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 316 650068737 301 51.81 27 300 12 287 2.0e-75 275 COG1173 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 289 650068738 308 49.37 1 306 1 316 3.0e-89 321 COG0601 ABC-type dipeptide/oligopeptide/nickel transport system, permease component 317 650068741 334 32.21 6 329 13 337 8.0e-59 221 COG4448 L-asparaginase II 339 650068742 386 27.6 83 386 8 313 8.0e-44 171 COG1940 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 314 650068745 215 40.48 1 208 4 213 4.0e-44 171 COG2345 Predicted transcriptional regulator, ArsR family 218 650068746 367 30.83 1 353 7 390 6.0e-57 214 COG2133 Glucose/arabinose dehydrogenase, beta-propeller fold 399 650068747 502 38.53 22 491 9 475 4.0e-120 425 COG0769 UDP-N-acetylmuramyl tripeptide synthase 475 650068748 243 32.56 9 218 3 213 2.0e-34 139 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650068750 245 27.88 19 242 2 216 3.0e-23 101 COG1556 L-lactate utilization protein LutC, contains LUD domain 218 650068751 506 46.42 6 465 2 457 0.0e+00 519 COG1139 L-lactate utilization protein LutB, contains a ferredoxin-type domain 459 650068753 258 44.14 1 255 1 249 5.0e-67 247 COG1349 DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family 253 650068754 489 26.54 1 469 4 482 2.0e-77 283 COG1070 Sugar (pentulose or hexulose) kinase 502 650068755 421 62.68 1 418 1 418 0.0e+00 699 COG4806 L-rhamnose isomerase 419 650068756 689 50.6 2 418 1 404 0.0e+00 521 COG3347 Rhamnose utilisation protein RhaD, predicted bifunctional aldolase and dehydrogenase 404 650068757 101 42.53 2 88 5 91 7.0e-18 82.3 COG4495 Uncharacterized protein 109 650068760 150 24.47 1 94 1 94 1.0e-07 49.2 COG4842 Uncharacterized conserved protein YukE 97 650068763 360 29.71 219 343 4 137 4.0e-18 85.7 COG1225 Peroxiredoxin 157 650068764 172 27.85 1 156 2 150 1.0e-07 49.5 COG1247 L-amino acid N-acyltransferase YncA 169 650068766 219 18.97 33 202 38 211 1.0e-13 70.3 COG1357 Uncharacterized protein YjbI, contains pentapeptide repeats 238 650068767 315 29.49 5 296 60 341 3.0e-38 152 COG0673 Predicted dehydrogenase 342 650068769 243 50 1 243 3 239 4.0e-81 294 COG3828 Type 1 glutamine amidotransferase (GATase1)-like domain 239 650068770 386 33.42 1 385 1 342 1.0e-61 230 COG0673 Predicted dehydrogenase 342 650068771 350 39.6 8 350 4 333 1.0e-71 263 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650068772 248 28.92 1 248 7 253 4.0e-09 55.4 COG0730 Uncharacterized membrane protein YfcA 258 650068773 417 21.08 14 396 8 412 1.0e-20 94.5 COG0738 Fucose permease 422 650068774 587 20.47 11 587 7 607 2.0e-53 204 COG1874 Beta-galactosidase GanA 673 650068776 130 37.78 1 129 8 142 2.0e-11 61.5 COG2259 Uncharacterized membrane protein YphA, DoxX/SURF4 family 142 650068780 265 41.41 5 260 3 252 3.0e-63 235 COG1349 DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family 253 650068781 343 44.38 1 340 6 352 3.0e-103 368 COG3842 ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components 352 650068782 273 25.19 1 265 2 264 1.0e-35 143 COG1177 ABC-type spermidine/putrescine transport system, permease component II 267 650068783 306 41.91 9 276 8 277 2.0e-61 229 COG4132 ABC-type uncharacterized transport system, permease component 282 650068784 374 26.25 78 369 1 296 2.0e-33 136 COG1840 ABC-type Fe3+ transport system, periplasmic component 299 650068785 214 33.02 1 210 72 281 3.0e-29 121 COG3639 ABC-type phosphate/phosphonate transport system, permease component 283 650068787 262 54.76 2 253 1 252 3.0e-89 321 COG3638 ABC-type phosphate/phosphonate transport system, ATPase component 258 650068788 341 22.92 1 341 1 292 6.0e-30 125 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component 299 650068790 302 37.12 1 296 84 376 2.0e-67 249 COG3454 Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase PhnM 377 650068792 281 45.49 5 281 3 256 2.0e-70 259 COG4107 ABC-type phosphonate transport system, ATPase component 258 650068793 377 40.91 3 364 2 350 6.0e-82 298 COG3626 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI 367 650068796 142 26.24 1 138 6 146 8.0e-08 49.6 COG3624 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG 151 650068797 239 31.14 5 232 10 234 5.0e-37 147 COG2188 DNA-binding transcriptional regulator, GntR family 236 650068798 211 33.97 30 182 37 190 2.0e-22 99.2 COG0110 Acetyltransferase (isoleucine patch superfamily) 190 650068799 284 32.81 1 253 2 247 9.0e-32 130 COG0613 Predicted metal-dependent phosphoesterase TrpH, contains PHP domain 258 650068801 497 41.02 1 497 2 501 0.0e+00 590 COG3534 Alpha-L-arabinofuranosidase 501 650068802 248 57.72 2 247 1 240 7.0e-98 350 COG1126 ABC-type polar amino acid transport system, ATPase component 240 650068803 209 43.01 8 193 13 194 1.0e-43 169 COG0765 ABC-type amino acid transport system, permease component 222 650068804 255 36.3 1 255 2 270 3.0e-38 152 COG0834 ABC-type amino acid transport/signal transduction system, periplasmic component/domain 275 650068807 309 55.95 1 309 1 310 1.0e-99 356 COG1227 Inorganic pyrophosphatase/exopolyphosphatase 311 650068808 340 26.36 13 340 4 286 2.0e-53 203 COG0812 UDP-N-acetylenolpyruvoylglucosamine reductase 291 650068809 316 61.59 35 316 54 342 2.0e-93 336 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 342 650068810 442 38.58 88 423 1 323 8.0e-69 254 COG1472 Periplasmic beta-glucosidase and related glycosidases 397 650068812 276 30.18 1 270 6 280 4.0e-54 205 COG1307 Fatty acid-binding protein DegV (function unknown) 282 650068814 251 39.33 161 249 1 85 3.0e-14 72.3 COG3860 Uncharacterized protein 89 650068817 431 19.3 44 413 41 391 2.0e-08 54.1 COG2814 Predicted arabinose efflux permease, MFS family 394 650068820 213 31.46 4 209 1 211 1.0e-29 123 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650068823 234 20.5 69 221 56 215 3.0e-05 42.6 COG1285 Uncharacterized membrane protein YhiD, involved in acid resistance 221 650068826 214 25.91 11 203 30 222 7.0e-22 97.3 COG0398 Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain 223 650068830 239 48.33 1 207 6 212 4.0e-53 201 COG2761 Predicted dithiol-disulfide isomerase, DsbA family 225 650068831 195 33.85 5 173 7 195 3.0e-30 124 COG0572 Uridine kinase 218 650068834 173 38.86 2 166 3 174 7.0e-29 120 COG3981 Predicted acetyltransferase 174 650068837 534 22.54 193 523 69 420 8.0e-35 142 COG3858 Spore germination protein YaaH 423 650068838 650 28.86 24 648 52 689 9.0e-124 437 COG1523 Pullulanase/glycogen debranching enzyme 697 650068840 367 20.61 1 356 25 358 2.0e-17 83.7 COG1721 Uncharacterized conserved protein, DUF58 family, contains vWF domain 416 650068841 326 43.03 1 319 1 328 5.0e-71 261 COG0714 MoxR-like ATPase 329 650068842 132 21.88 1 94 2 97 4.0e-08 50.3 COG2329 Heme-degrading monooxygenase HmoA and related ABM domain proteins 105 650068844 321 29.22 5 305 2 303 6.0e-40 158 COG0492 Thioredoxin reductase 305 650068845 411 35.39 22 197 1 178 1.0e-30 127 COG2059 Chromate transport protein ChrA 195 650068848 412 48.99 9 404 2 395 6.0e-94 337 COG2807 Cyanate permease 395 650068852 864 20.19 9 417 11 406 8.0e-15 76.5 COG4591 ABC-type transport system, involved in lipoprotein release, permease component 408 650068853 227 50.22 3 224 1 225 7.0e-76 277 COG1136 ABC-type lipoprotein export system, ATPase component 226 650068854 312 22.62 6 171 31 196 2.0e-11 63 COG4767 Glycopeptide antibiotics resistance protein 199 650068855 333 25.23 5 328 14 327 4.0e-33 135 COG0642 Signal transduction histidine kinase 336 650068856 236 41.23 10 233 1 224 2.0e-54 205 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650068857 264 56.65 1 263 1 263 3.0e-89 321 COG1101 ABC-type uncharacterized transport system, ATPase component 263 650068858 306 54.98 4 285 2 291 6.0e-75 274 COG4120 ABC-type uncharacterized transport system, permease component 293 650068859 345 40.79 1 331 2 312 1.0e-67 250 COG2984 ABC-type uncharacterized transport system, periplasmic component 322 650068860 212 24.04 6 204 7 206 2.0e-14 72.6 COG2755 Lysophospholipase L1 or related esterase 216 650068861 301 47.24 3 292 1 278 8.0e-104 370 COG1054 Predicted sulfurtransferase 308 650068863 197 23.19 45 161 4 133 2.0e-03 35.6 COG1225 Peroxiredoxin 157 650068867 463 45.21 57 457 2 395 4.0e-87 315 COG1921 Seryl-tRNA(Sec) selenium transferase 395 650068868 82 40 5 73 4 73 5.0e-06 42.6 COG4844 Uncharacterized protein YuzB, UPF0349 family 78 650068869 263 36.96 6 257 2 248 4.0e-45 175 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650068870 360 39.19 10 356 5 345 1.0e-85 310 COG2706 6-phosphogluconolactonase, cycloisomerase 2 family 346 650068872 424 51.29 1 423 2 404 9.0e-111 393 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component 404 650068873 958 44.89 8 947 3 906 0.0e+00 1087 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 906 650068874 310 33.45 19 299 1 258 3.0e-52 199 COG1801 Uncharacterized conserved protein YecE, DUF72 family 263 650068875 188 31.14 25 188 3 168 4.0e-24 104 COG0622 Predicted phosphodiesterase 172 650068876 212 24.64 1 204 3 208 4.0e-14 71.8 COG1280 Threonine/homoserine/homoserine lactone efflux protein 208 650068877 458 34.57 1 445 4 462 3.0e-89 322 COG1113 L-asparagine transporter and related permeases 462 650068881 494 37.07 1 394 5 387 5.0e-67 248 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 393 650068885 894 36.33 456 731 73 329 2.0e-37 151 COG0642 Signal transduction histidine kinase 336 650068888 187 33.33 5 118 2 106 5.0e-13 67.7 COG1734 RNA polymerase-binding transcription factor DksA 120 650068890 424 18.9 52 416 46 383 1.0e-05 44.8 COG2814 Predicted arabinose efflux permease, MFS family 394 650068891 334 29.62 2 334 1 341 4.0e-57 215 COG0673 Predicted dehydrogenase 342 650068893 395 20.7 5 372 4 332 3.0e-09 56.8 COG3274 Surface polysaccharide O-acyltransferase, integral membrane enzyme 332 650068897 265 36.68 6 260 1 248 9.0e-47 180 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650068898 279 22.76 62 275 24 247 2.0e-09 56.6 COG0631 Serine/threonine protein phosphatase PrpC 262 650068902 91 22.47 1 89 1 89 8.0e-09 52.2 COG4842 Uncharacterized conserved protein YukE 97 650068908 109 34.91 4 105 2 107 7.0e-18 82.2 COG1695 DNA-binding transcriptional regulator, PadR family 138 650068909 186 25.64 1 186 1 195 2.0e-18 85.4 COG4709 Uncharacterized membrane protein 195 650068911 208 45.85 1 205 1 202 9.0e-63 233 COG1182 FMN-dependent NADH-azoreductase 202 650068912 101 48.19 7 89 3 85 3.0e-20 90 COG3860 Uncharacterized protein 89 650068913 325 26.28 1 325 3 300 2.0e-38 152 COG0492 Thioredoxin reductase 305 650068914 147 61.9 1 147 2 148 2.0e-32 131 COG2707 Uncharacterized membrane protein, DUF441 family 151 650068915 266 24.9 14 262 44 289 2.0e-18 86.5 COG0382 4-hydroxybenzoate polyprenyltransferase 289 650068916 210 25.5 1 200 3 190 5.0e-23 101 COG0560 Phosphoserine phosphatase 212 650068920 124 31.67 5 124 2 119 3.0e-19 87.2 COG3682 Predicted transcriptional regulator 123 650068921 474 24.48 4 332 5 326 1.0e-31 131 COG4219 Signal transducer regulating beta-lactamase production, contains metallopeptidase domain 337 650068922 556 43.42 1 555 24 567 0.0e+00 475 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650068925 101 47.37 1 95 1 95 3.0e-24 103 COG4841 Uncharacterized protein YneR 95 650068926 603 35.66 21 592 2 565 1.0e-122 434 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650068927 701 40.33 141 676 32 566 4.0e-127 449 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650068932 296 30.71 1 237 1 254 7.0e-40 157 COG1131 ABC-type multidrug transport system, ATPase component 293 650068933 160 48.72 1 155 19 174 9.0e-53 199 COG0225 Peptide methionine sulfoxide reductase MsrA 174 650068936 325 28.17 5 319 1 277 5.0e-53 201 COG0523 GTPase, G3E family 323 650068937 172 52.2 8 164 1 157 5.0e-45 173 COG0521 Molybdopterin biosynthesis enzyme MoaB 169 650068939 333 32.12 7 330 1 324 2.0e-53 203 COG0604 NADPH:quinone reductase or related Zn-dependent oxidoreductase 326 650068941 484 44.62 6 379 13 378 2.0e-100 360 COG1488 Nicotinic acid phosphoribosyltransferase 405 650068942 184 32.12 1 181 5 197 1.0e-29 123 COG1335 Nicotinamidase-related amidase 205 650068943 257 44.09 42 167 16 141 1.0e-26 113 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650068944 149 40.17 24 140 4 120 1.0e-15 76.2 COG4550 Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development) 120 650068945 519 48.53 74 509 4 436 0.0e+00 523 COG0621 tRNA A37 methylthiotransferase MiaB 437 650068946 190 58.6 5 189 23 208 3.0e-64 237 COG4869 Propanediol utilization protein 210 650068949 86 82.56 1 86 1 86 2.0e-31 127 COG2359 Stage V sporulation protein SpoVS (function unknown) 87 650068950 267 54.79 4 263 1 261 1.0e-99 356 COG1692 Calcineurin-like phosphoesterase 266 650068951 514 56.5 293 514 1 222 2.0e-51 196 COG1418 HD superfamily phosphodieaserase, includes HD domain of RNase Y 222 650068952 245 34.29 64 237 1 174 4.0e-21 95.4 COG2137 SOS response regulatory protein OraA/RecX, interacts with RecA 174 650068953 353 63.73 1 280 4 279 1.0e-85 309 COG0468 RecA/RadA recombinase 279 650068954 420 46.64 1 250 2 252 1.0e-70 260 COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA 255 650068955 195 37.63 1 191 12 189 6.0e-21 93.9 COG0558 Phosphatidylglycerophosphate synthase 192 650068956 163 52.44 1 163 1 164 9.0e-48 182 COG1666 Uncharacterized conserved protein YajQ, UPF0234 family 165 650068958 319 24.53 1 254 1 262 1.0e-28 120 COG1426 Cytoskeletal protein RodZ, contains Xre-like HTH and DUF4115 domains 284 650068961 256 39.76 15 255 6 251 4.0e-49 188 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650068962 426 28.8 6 423 1 428 2.0e-70 260 COG0612 Predicted Zn-dependent peptidase 438 650068963 426 24.07 10 426 22 434 2.0e-42 167 COG0612 Predicted Zn-dependent peptidase 438 650068965 370 38.5 8 367 1 355 3.0e-91 328 COG4225 Rhamnogalacturonyl hydrolase YesR 357 650068966 504 52.03 113 504 3 381 0.0e+00 470 COG2721 Altronate dehydratase 381 650068967 505 28.31 20 503 2 464 4.0e-78 285 COG0246 Mannitol-1-phosphate/altronate dehydrogenases 473 650068968 285 36.13 165 283 5 123 1.0e-19 90.3 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650068970 258 23.5 59 239 31 197 2.0e-27 116 COG0740 ATP-dependent protease ClpP, protease subunit 200 650068971 559 55.73 2 557 1 555 0.0e+00 672 COG0595 mRNA degradation ribonuclease J1/J2 555 650068972 293 46.74 1 288 3 288 5.0e-79 287 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 299 650068973 404 36.68 1 402 1 446 9.0e-101 360 COG0527 Aspartokinase 447 650068978 147 60 8 147 9 147 6.0e-50 190 COG0756 dUTPase 148 650068979 422 38.72 1 409 17 437 1.0e-94 340 COG0612 Predicted Zn-dependent peptidase 438 650068980 701 60.55 1 692 3 691 0.0e+00 971 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 692 650068981 89 67.42 1 89 1 89 2.0e-27 114 COG0184 Ribosomal protein S15P/S13E 89 650068982 317 41.4 1 314 1 304 4.0e-84 304 COG0196 FAD synthase 304 650068983 303 35.43 1 302 11 269 2.0e-60 225 COG0130 tRNA U55 pseudouridine synthase TruB, may also work on U342 of tmRNA 271 650068984 325 32.93 5 325 3 328 7.0e-52 197 COG0618 nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs 332 650068985 117 57.41 5 111 6 113 3.0e-30 123 COG0858 Ribosome-binding factor A 118 650068987 806 66.82 389 806 1 422 0.0e+00 610 COG0532 Translation initiation factor IF-2, a GTPase 509 650068988 108 36.79 1 105 11 116 5.0e-16 76.1 COG1358 Ribosomal protein L7Ae or related RNA K-turn-binding protein 116 650068989 103 50.6 1 83 1 83 2.0e-18 84.2 COG2740 Predicted RNA-binding protein YlxR, DUF448 family 95 650068990 365 53.12 156 346 1 186 2.0e-47 183 COG0195 Transcription antitermination factor NusA, contains S1 and KH domains 190 650068991 153 45.75 1 153 1 153 7.0e-43 166 COG0779 Ribosome maturation factor RimP 153 650068992 485 32.41 7 485 4 499 4.0e-115 408 COG0442 Prolyl-tRNA synthetase 500 650068993 424 30.56 149 423 77 375 6.0e-34 138 COG0750 Membrane-associated protease RseP, regulator of RpoE activity 375 650068994 379 57.82 1 376 1 376 0.0e+00 540 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 385 650068995 266 36.7 1 266 2 265 1.0e-34 140 COG0575 CDP-diglyceride synthetase 265 650068996 184 63.78 1 184 3 187 3.0e-63 234 COG0233 Ribosome recycling factor 187 650068997 242 64.29 2 239 1 238 9.0e-97 346 COG0528 Uridylate kinase 238 650069002 469 34.89 2 463 67 530 3.0e-70 259 COG1315 Uncharacterized conserved protein, DUF342 family 543 650069003 262 37.55 12 254 11 247 2.0e-41 163 COG1191 DNA-directed RNA polymerase specialized sigma subunit 247 650069005 165 48.43 7 165 9 164 4.0e-44 170 COG1871 Chemotaxis receptor (MCP) glutamine deamidase CheD 164 650069006 208 36.45 1 203 1 201 2.0e-36 145 COG1776 Chemotaxis protein CheY-P-specific phosphatase CheC 203 650069007 153 44.59 1 148 14 160 5.0e-33 133 COG0835 Chemotaxis signal transduction protein 165 650069009 296 35.82 31 294 4 261 3.0e-49 189 COG0455 MinD-like ATPase involved in chromosome partitioning or flagellar assembly 262 650069010 479 36.15 185 476 101 396 4.0e-63 235 COG1419 Flagellar biosynthesis GTPase FlhF 407 650069011 677 55.15 1 677 16 695 0.0e+00 834 COG1298 Flagellar biosynthesis pathway, component FlhA 696 650069012 316 46.01 4 316 43 355 9.0e-97 346 COG1377 Flagellar biosynthesis protein FlhB 363 650069013 262 37.5 11 258 15 258 6.0e-42 164 COG1684 Flagellar biosynthesis protein FliR 258 650069014 89 52.81 1 89 1 89 7.0e-17 79 COG1987 Flagellar biosynthesis protein FliQ 89 650069015 250 56.28 3 249 2 248 2.0e-71 262 COG1338 Flagellar biosynthetic protein FliP 248 650069016 174 22.03 19 133 22 136 4.0e-06 44.9 COG3190 Flagellar biogenesis protein FliO 137 650069018 419 35.2 37 231 7 201 1.0e-34 140 COG1776 Chemotaxis protein CheY-P-specific phosphatase CheC 203 650069019 154 20.83 1 142 13 148 6.0e-05 40.6 COG1580 Flagellar basal body-associated protein FliL 159 650069020 74 55 1 60 1 60 3.0e-14 70.3 COG1582 Uncharacterized protein YlzI, FlbEa/FlbD family 67 650069021 274 41.16 1 274 1 265 3.0e-60 225 COG4786 Flagellar basal body rod protein FlgG 265 650069024 447 19.27 10 414 16 399 1.0e-12 68.2 COG3144 Flagellar hook-length control protein FliK 417 650069025 308 27.66 20 207 10 182 2.0e-08 53.9 COG3334 Flagellar motility protein MotE, a chaperone for MotC folding 192 650069026 147 26.03 1 146 1 146 2.0e-08 51.8 COG2882 Flagellar biosynthesis chaperone FliJ 148 650069027 439 60.09 7 437 10 440 0.0e+00 611 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase 441 650069028 284 25.85 63 266 27 224 9.0e-12 64.2 COG1317 Flagellar biosynthesis/type III secretory pathway protein FliH 234 650069029 331 51.98 2 329 11 339 1.0e-90 326 COG1536 Flagellar motor switch protein FliG 339 650069030 102 31.07 1 102 3 105 2.0e-10 57.6 COG1677 Flagellar hook-basal body complex protein FliE 105 650069031 149 48.99 1 149 1 137 4.0e-42 163 COG1558 Flagellar basal body rod protein FlgC 137 650069032 135 40 6 135 5 133 2.0e-25 108 COG1815 Flagellar basal body rod protein FlgB 133 650069033 468 59.87 3 468 1 444 0.0e+00 629 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit 444 650069034 180 63.84 4 180 1 175 1.0e-69 255 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit 178 650069035 442 71.49 2 434 1 435 0.0e+00 738 COG1206 Folate-dependent tRNA-U54 methylase TrmFO/GidA 439 650069036 669 41.09 531 654 1 129 1.0e-28 121 COG0551 ssDNA-binding Zn-finger and Zn-ribbon domains of topoisomerase 1 140 650069036 669 50.63 1 548 29 570 0.0e+00 625 COG0550 DNA topoisomerase IA 570 650069037 391 34.79 4 391 5 350 6.0e-82 298 COG0758 Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake 350 650069038 309 66.23 1 301 1 293 2.0e-117 415 COG0074 Succinyl-CoA synthetase, alpha subunit 293 650069039 386 61.34 1 386 1 385 0.0e+00 537 COG0045 Succinyl-CoA synthetase, beta subunit 387 650069045 532 49.41 14 522 1 489 0.0e+00 569 COG0606 Predicted ATPase with chaperone activity 490 650069046 144 23.29 1 128 12 157 1.0e-05 42.3 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650069047 118 14.71 9 117 3 138 8.0e-03 32.5 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650069048 127 39.83 11 127 1 112 7.0e-26 109 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 114 650069049 103 51.72 12 98 5 91 7.0e-21 91.8 COG2257 Type III secretion system substrate exporter, FlhB-like 92 650069051 205 54.95 17 193 1 181 5.0e-55 207 COG0164 Ribonuclease HII 199 650069052 288 43.49 1 288 12 299 7.0e-71 260 COG1161 Ribosome biogenesis GTPase A 322 650069053 204 26.58 19 173 1 157 9.0e-10 56.9 COG0681 Signal peptidase I 166 650069054 115 75.22 2 114 3 115 3.0e-41 159 COG0335 Ribosomal protein L19 115 650069058 271 53.76 1 265 1 240 6.0e-105 373 COG0336 tRNA G37 N-methylase TrmD 240 650069059 173 45.35 3 173 5 173 6.0e-41 160 COG0806 Ribosomal 30S subunit maturation factor RimM, required for 16S rRNA processing 174 650069060 76 50.67 1 75 1 75 2.0e-16 77.5 COG1837 Predicted RNA-binding protein YlqC, contains KH domain, UPF0109 family 76 650069061 90 62.07 2 87 1 87 2.0e-28 117 COG0228 Ribosomal protein S16 87 650069062 460 58.08 2 459 1 451 0.0e+00 613 COG0541 Signal recognition particle GTPase 451 650069063 118 54.65 7 92 1 86 3.0e-17 80.3 COG2739 Predicted DNA-binding protein YlxM, UPF0122 family 105 650069064 233 52.8 22 232 13 226 3.0e-45 175 COG1272 Predicted membrane channel-forming protein YqfA, hemolysin III family 226 650069065 354 50.56 1 351 19 374 4.0e-111 394 COG0381 UDP-N-acetylglucosamine 2-epimerase 383 650069068 336 17.2 1 312 1 363 2.0e-09 56.9 COG2327 Polysaccharide pyruvyl transferase family protein WcaK 385 650069071 333 53.24 1 319 1 340 1.0e-106 379 COG0552 Signal recognition particle GTPase 340 650069072 1189 41.5 1 1188 1 1163 0.0e+00 694 COG1196 Chromosome segregation ATPase 1163 650069073 232 53.1 4 228 7 230 6.0e-73 267 COG0571 dsRNA-specific ribonuclease 235 650069074 412 56.76 1 410 1 411 0.0e+00 516 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 412 650069075 77 57.14 1 77 3 79 3.0e-11 60.3 COG0236 Acyl carrier protein 80 650069076 249 53.39 5 247 3 250 6.0e-53 200 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650069077 310 55.66 1 307 1 308 7.0e-100 357 COG0331 Malonyl CoA-acyl carrier protein transacylase 310 650069078 329 56.35 7 329 4 322 1.0e-119 422 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 323 650069079 328 54.22 1 327 2 333 8.0e-118 416 COG0416 Fatty acid/phospholipid biosynthesis enzyme 338 650069080 134 20.8 11 130 15 136 7.0e-07 46.2 COG2050 Acyl-coenzyme A thioesterase PaaI, contains HGG motif 141 650069082 57 55.36 1 56 1 56 2.0e-14 70.7 COG0333 Ribosomal protein L32 57 650069083 169 27.38 4 169 8 175 4.0e-19 87.7 COG1399 Uncharacterized metal-binding protein YceD, DUF177 family 176 650069084 411 38.08 1 363 1 350 1.0e-69 257 COG1323 Predicted nucleotidyltransferase 358 650069086 310 36.25 1 308 1 298 4.0e-54 205 COG3480 Predicted secreted protein containing a PDZ domain 342 650069088 171 59.24 10 166 3 159 8.0e-63 232 COG0669 Phosphopantetheine adenylyltransferase 159 650069089 205 45.16 5 187 2 186 3.0e-49 188 COG0742 16S rRNA G966 N2-methylase RsmD 187 650069096 223 19.91 9 213 29 237 1.0e-04 40 COG4700 Uncharacterized protein 251 650069097 192 23.68 2 183 28 204 5.0e-12 64.6 COG2755 Lysophospholipase L1 or related esterase 216 650069099 149 29.46 30 141 12 123 2.0e-13 68.4 COG1846 DNA-binding transcriptional regulator, MarR family 126 650069100 238 51.33 3 227 2 227 9.0e-77 280 COG0120 Ribose 5-phosphate isomerase 227 650069102 191 49.42 7 176 1 168 5.0e-42 164 COG2110 O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain 179 650069106 336 43.2 2 335 1 332 1.0e-86 313 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650069107 402 24.1 8 344 18 377 2.0e-19 90.6 COG2211 Na+/melibiose symporter or related transporter 467 650069108 245 37.8 4 243 6 257 3.0e-49 188 COG0584 Glycerophosphoryl diester phosphodiesterase 257 650069109 154 30.58 21 141 7 124 4.0e-14 71.1 COG1846 DNA-binding transcriptional regulator, MarR family 126 650069110 414 18.84 1 395 1 390 2.0e-12 67.2 COG2814 Predicted arabinose efflux permease, MFS family 394 650069111 376 56.54 1 301 1 305 3.0e-112 398 COG1125 ABC-type proline/glycine betaine transport system, ATPase component 309 650069112 218 62.14 9 214 12 217 1.0e-54 206 COG1174 ABC-type proline/glycine betaine transport system, permease component 221 650069113 296 41.34 11 287 4 282 2.0e-70 259 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 300 650069114 429 22.08 8 400 15 390 1.0e-25 111 COG2814 Predicted arabinose efflux permease, MFS family 394 650069115 567 28.86 160 553 33 408 2.0e-37 150 COG0840 Methyl-accepting chemotaxis protein 408 650069117 775 31.54 8 767 8 747 0.0e+00 507 COG3973 DNA helicase IV 747 650069118 352 26.35 1 289 7 296 1.0e-35 143 COG4129 Uncharacterized membrane protein YgaE, UPF0421/DUF939 family 332 650069123 350 32.53 21 304 18 298 2.0e-32 133 COG2603 tRNA 2-selenouridine synthase SelU, contains rhodanese domain 334 650069124 329 45.89 12 327 32 345 8.0e-90 323 COG0709 Selenophosphate synthase 346 650069125 355 28.67 75 355 17 316 1.0e-36 147 COG0701 Uncharacterized membrane protein YraQ, UPF0718 family 317 650069126 399 23.05 101 376 29 303 6.0e-14 72.1 COG0760 Parvulin-like peptidyl-prolyl isomerase 320 650069133 575 39.12 11 550 1 530 0.0e+00 497 COG0578 Glycerol-3-phosphate dehydrogenase 532 650069134 496 67.54 1 496 3 497 0.0e+00 820 COG0554 Glycerol kinase 499 650069135 298 31.74 2 291 30 309 3.0e-39 155 COG1940 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 314 650069137 419 30.18 1 414 1 430 3.0e-47 182 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069138 312 40.82 21 312 3 294 2.0e-60 226 COG1175 ABC-type sugar transport system, permease component 295 650069139 278 44.29 3 277 2 281 8.0e-64 237 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069140 320 23.39 1 319 3 341 5.0e-36 144 COG0673 Predicted dehydrogenase 342 650069141 474 46.72 4 474 1 469 0.0e+00 528 COG1012 Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase 472 650069142 324 52.16 2 324 1 320 3.0e-103 368 COG4607 ABC-type enterochelin transport system, periplasmic component 320 650069143 252 64.54 1 251 1 251 2.0e-107 381 COG4604 ABC-type enterochelin transport system, ATPase component 252 650069144 315 58.33 4 315 5 316 5.0e-89 321 COG4605 ABC-type enterochelin transport system, permease component 316 650069145 317 61.71 1 316 5 320 3.0e-109 388 COG4606 ABC-type enterochelin transport system, permease component 321 650069146 200 61.81 1 199 2 199 6.0e-78 283 COG3560 Fatty acid repression mutant protein (predicted oxidoreductase) 200 650069150 162 34.97 1 161 21 182 5.0e-20 90.5 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650069155 377 26.63 45 365 66 371 1.0e-28 120 COG0840 Methyl-accepting chemotaxis protein 408 650069157 186 28.5 1 178 2 194 6.0e-25 107 COG0406 Broad specificity phosphatase PhoE 208 650069158 150 29.46 5 133 9 127 5.0e-14 70.4 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650069162 182 45.2 8 181 9 184 2.0e-39 155 COG3575 Uncharacterized protein 184 650069163 303 40.84 3 301 1 307 4.0e-51 195 COG0524 Sugar or nucleoside kinase, ribokinase family 311 650069165 460 23.53 16 313 14 298 5.0e-15 76.1 COG1397 ADP-ribosylglycohydrolase 314 650069166 386 24.3 1 353 1 305 5.0e-25 108 COG1397 ADP-ribosylglycohydrolase 314 650069167 497 22.19 1 368 1 340 8.0e-12 65.4 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069168 290 33.11 2 289 5 281 2.0e-43 169 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069169 297 43 1 297 10 309 7.0e-77 280 COG4209 ABC-type polysaccharide transport system, permease component 309 650069172 232 41.2 1 227 1 233 5.0e-43 167 COG2186 DNA-binding transcriptional regulator, FadR family 241 650069176 355 24.3 1 353 1 341 1.0e-44 173 COG0673 Predicted dehydrogenase 342 650069178 124 44.54 4 119 5 121 4.0e-25 106 COG4288 Uncharacterized protein 124 650069179 365 21.49 145 360 11 216 5.0e-13 69.2 COG2755 Lysophospholipase L1 or related esterase 216 650069181 512 26.64 1 512 1 473 2.0e-58 220 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650069182 446 21.26 41 443 23 432 7.0e-34 138 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069183 299 41.5 1 291 1 290 4.0e-57 215 COG1175 ABC-type sugar transport system, permease component 295 650069184 277 41.67 3 276 8 281 8.0e-59 220 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069185 349 41.64 6 343 5 351 6.0e-96 344 COG4225 Rhamnogalacturonyl hydrolase YesR 357 650069186 205 37.5 63 193 5 138 3.0e-22 98.2 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650069191 403 26.59 1 403 1 381 6.0e-39 155 COG0438 Glycosyltransferase involved in cell wall bisynthesis 381 650069193 367 19.29 1 364 1 385 4.0e-11 62.6 COG1748 Saccharopine dehydrogenase, NADP-dependent 389 650069195 297 33.11 1 295 1 291 6.0e-73 267 COG0384 Predicted epimerase YddE/YHI9, PhzF superfamily 291 650069196 305 42.24 3 300 1 300 2.0e-81 295 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 300 650069197 218 58.74 9 214 12 217 4.0e-54 204 COG1174 ABC-type proline/glycine betaine transport system, permease component 221 650069198 377 54.98 1 303 1 307 3.0e-110 391 COG1125 ABC-type proline/glycine betaine transport system, ATPase component 309 650069201 369 15.86 1 280 2 291 1.0e-11 64.4 COG0463 Glycosyltransferase involved in cell wall bisynthesis 291 650069206 194 37.44 1 192 12 189 1.0e-20 93.5 COG0558 Phosphatidylglycerophosphate synthase 192 650069208 114 22.14 6 111 3 131 1.0e-04 38.3 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650069209 170 30.28 13 119 15 123 1.0e-08 53.1 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650069210 217 44.39 1 204 2 205 9.0e-55 206 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 211 650069211 500 48.29 1 497 4 497 0.0e+00 488 COG3333 TctA family transporter 504 650069213 270 36.73 1 270 45 318 3.0e-55 208 COG3181 Tripartite-type tricarboxylate transporter, receptor component TctC 319 650069214 253 46.12 3 247 1 245 1.0e-71 263 COG1414 DNA-binding transcriptional regulator, IclR family 246 650069215 276 30.52 45 194 21 174 3.0e-23 102 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650069216 193 64.58 1 192 1 192 3.0e-75 274 COG0740 ATP-dependent protease ClpP, protease subunit 200 650069218 303 16.99 6 252 17 268 4.0e-08 52.3 COG3173 Predicted kinase, aminoglycoside phosphotransferase (APT) family 321 650069220 103 21.05 1 93 2 96 1.0e-13 68.1 COG2329 Heme-degrading monooxygenase HmoA and related ABM domain proteins 105 650069221 117 37.96 1 107 5 111 2.0e-21 94.6 COG3502 Uncharacterized conserved protein, DUF952 family 115 650069222 229 21.1 8 217 26 240 7.0e-15 74.2 COG4242 Cyanophycinase and related exopeptidases 293 650069224 335 23.51 40 321 50 318 3.0e-18 86.2 COG2334 Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist 331 650069225 182 22.94 58 166 35 136 2.0e-06 45.8 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650069226 564 22.18 6 561 19 594 6.0e-78 285 COG1164 Oligoendopeptidase F 598 650069227 104 39.42 1 104 2 105 3.0e-14 70.1 COG2076 Multidrug transporter EmrE and related cation transporters 106 650069228 115 42.72 5 104 4 106 2.0e-16 77.4 COG2076 Multidrug transporter EmrE and related cation transporters 106 650069229 288 32.07 1 279 1 288 8.0e-37 147 COG0583 DNA-binding transcriptional regulator, LysR family 297 650069230 184 32.4 10 183 1 179 2.0e-30 125 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650069231 286 26.18 1 275 1 259 1.0e-33 137 COG0561 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases 264 650069233 219 23.38 1 214 2 227 3.0e-17 82.3 COG1011 FMN phosphatase YigB, HAD superfamily 229 650069235 134 29.93 7 133 18 149 2.0e-06 45.1 COG1714 Uncharacterized membrane protein YckC, RDD family 172 650069238 158 26.53 4 148 8 145 2.0e-13 68.5 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650069239 304 17.75 1 299 2 341 4.0e-09 55.6 COG0673 Predicted dehydrogenase 342 650069243 262 48.68 1 226 28 255 2.0e-73 269 COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 257 650069245 249 22.36 7 249 10 228 3.0e-15 75.7 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650069246 312 20.55 11 283 11 279 1.0e-07 50.4 COG2017 Galactose mutarotase or related enzyme 308 650069248 297 35.34 177 292 4 119 2.0e-20 93 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650069250 703 31.18 12 697 4 682 5.0e-112 399 COG3345 Alpha-galactosidase 687 650069251 537 23.06 1 383 1 349 5.0e-18 86.2 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069252 612 30.42 256 597 111 455 2.0e-38 154 COG2972 Sensor histidine kinase YesM 456 650069253 325 45.13 19 325 9 309 2.0e-84 305 COG4209 ABC-type polysaccharide transport system, permease component 309 650069254 297 29.87 5 296 3 281 1.0e-42 166 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069263 365 22.35 9 353 2 312 6.0e-30 124 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650069264 346 36.34 17 344 1 332 9.0e-52 197 COG0609 ABC-type Fe3+-siderophore transport system, permease component 334 650069265 343 38.65 17 340 20 345 7.0e-54 204 COG4779 ABC-type enterobactin transport system, permease component 346 650069266 271 50 5 262 1 258 5.0e-92 330 COG1120 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component 258 650069274 420 44.26 7 67 1 61 3.0e-11 63.3 COG1476 DNA-binding transcriptional regulator, XRE-family HTH domain 68 650069276 494 21.85 30 289 2 254 2.0e-20 94.3 COG3568 Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family 259 650069277 501 32.34 47 382 16 298 7.0e-54 205 COG2421 Acetamidase/formamidase 305 650069282 147 19.26 2 134 26 159 2.0e-05 41.9 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650069285 512 28.12 152 501 17 336 7.0e-39 155 COG0642 Signal transduction histidine kinase 336 650069286 231 44.74 3 225 2 224 3.0e-60 224 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650069288 246 28.3 1 199 4 202 5.0e-24 104 COG0300 Short-chain dehydrogenase 265 650069291 255 29.44 38 243 37 242 6.0e-28 117 COG0327 Putative GTP cyclohydrolase 1 type 2, NIF3 family 250 650069295 267 37.66 1 237 6 242 5.0e-62 231 COG0796 Glutamate racemase 269 650069296 516 20.59 10 340 22 321 2.0e-04 41.1 COG1565 SAM-dependent methyltransferase, MidA family 370 650069299 140 19.12 5 128 3 138 9.0e-08 49.4 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650069300 155 26.83 1 153 3 165 2.0e-22 98.1 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650069302 457 25.83 10 328 10 322 3.0e-33 136 COG3669 Alpha-L-fucosidase 430 650069303 490 12.44 19 419 19 422 3.0e-12 67 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069306 308 40.59 1 303 5 305 2.0e-78 285 COG4209 ABC-type polysaccharide transport system, permease component 309 650069307 292 32.54 1 291 3 281 6.0e-45 174 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069308 213 26.95 39 200 14 180 1.0e-25 110 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650069311 252 43.75 4 225 1 223 2.0e-61 228 COG1136 ABC-type lipoprotein export system, ATPase component 226 650069313 194 19.14 1 162 25 186 2.0e-12 65.8 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650069315 257 43.63 3 254 2 250 2.0e-47 182 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650069316 245 40.94 2 243 1 251 4.0e-48 185 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650069319 172 18.38 27 162 23 143 4.0e-03 34.6 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650069320 393 38.62 1 232 1 241 3.0e-51 196 COG2872 Ser-tRNA(Ala) deacylase AlaX (editing enzyme) 241 650069326 280 24.73 4 272 3 275 3.0e-26 112 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650069327 319 34.19 1 314 70 454 2.0e-59 223 COG1621 Sucrose-6-phosphate hydrolase SacC, GH32 family 486 650069330 141 31.4 1 111 3 123 5.0e-17 80.5 COG1051 ADP-ribose pyrophosphatase YjhB, NUDIX family 145 650069333 884 29.58 87 641 127 646 5.0e-94 339 COG0209 Ribonucleotide reductase alpha subunit 696 650069339 267 30.33 36 266 14 230 4.0e-31 128 COG0860 N-acetylmuramoyl-L-alanine amidase 231 650069340 742 28.12 353 736 40 408 5.0e-44 173 COG0840 Methyl-accepting chemotaxis protein 408 650069341 295 41.67 57 283 24 246 2.0e-54 206 COG2861 Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family 250 650069345 109 29.17 7 102 16 111 3.0e-12 63.5 COG0599 Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family 124 650069348 189 32.78 1 180 5 179 1.0e-26 113 COG0503 Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein 179 650069349 337 31.83 8 317 6 314 7.0e-47 181 COG3949 Uncharacterized membrane protein YkvI 349 650069350 435 24.23 5 308 2 311 5.0e-36 145 COG0420 DNA repair exonuclease SbcCD nuclease subunit 390 650069351 359 36.18 62 353 75 377 1.0e-33 137 COG0438 Glycosyltransferase involved in cell wall bisynthesis 381 650069353 461 34.21 3 283 51 353 2.0e-61 229 COG0144 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family 355 650069354 188 27.43 1 169 1 172 1.0e-26 112 COG0431 NAD(P)H-dependent FMN reductase 184 650069355 357 21.08 26 343 3 334 2.0e-36 146 COG2141 Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) 336 650069358 75 50.79 1 63 2 64 2.0e-16 77 COG3251 Uncharacterized conserved protein YbdZ, MbtH family 71 650069359 325 58.69 1 213 1 213 4.0e-80 291 COG1535 Isochorismate hydrolase 218 650069360 550 59.93 1 539 4 537 0.0e+00 750 COG1021 Non-ribosomal peptide synthetase component E (peptide arylation enzyme) 542 650069361 414 36.67 25 404 46 422 2.0e-96 346 COG1169 Isochorismate synthase EntC 423 650069362 261 40.86 6 256 3 249 2.0e-42 165 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650069363 280 34.63 26 279 15 262 1.0e-45 176 COG2819 Predicted hydrolase of the alpha/beta superfamily 264 650069364 356 26.78 65 353 19 312 1.0e-37 150 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650069365 405 24.81 126 383 53 308 3.0e-27 116 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650069366 266 30.08 1 265 1 262 6.0e-44 171 COG0561 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases 264 650069367 253 47.18 10 253 4 247 6.0e-66 244 COG1187 16S rRNA U516 pseudouridylate synthase RsuA and related 23S rRNA U2605, pseudouridylate synthases 248 650069368 537 36.51 5 312 54 355 5.0e-72 265 COG0144 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family 355 650069369 175 25.47 47 147 4 108 2.0e-06 45.7 COG0526 Thiol-disulfide isomerase or thioredoxin 127 650069371 147 27.66 11 144 18 154 2.0e-09 55 COG1547 Predicted metal-dependent hydrolase 156 650069372 270 53.81 1 208 13 222 2.0e-61 229 COG2357 ppGpp synthetase catalytic domain (RelA/SpoT-type nucleotidyltranferase) 231 650069373 366 43.61 53 366 1 309 2.0e-85 309 COG0167 Dihydroorotate dehydrogenase 310 650069376 79 52.11 3 73 1 68 2.0e-12 64.2 COG1141 Ferredoxin 68 650069377 447 42.06 13 365 1 354 5.0e-86 311 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 354 650069378 272 19.63 15 227 30 236 1.0e-10 60.3 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650069379 538 35.7 3 423 1 409 2.0e-100 360 COG0119 Isopropylmalate/homocitrate/citramalate synthases 409 650069380 183 31.15 41 161 4 123 1.0e-12 66.5 COG0526 Thiol-disulfide isomerase or thioredoxin 127 650069381 177 30.43 10 121 1 107 3.0e-08 51.7 COG1310 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif 134 650069384 471 44.29 29 445 3 407 6.0e-96 344 COG0004 Ammonia channel protein AmtB 409 650069385 150 35.96 11 118 1 114 7.0e-14 70.2 COG0789 DNA-binding transcriptional regulator, MerR family 124 650069386 226 57.52 1 226 1 226 1.0e-86 312 COG2738 Zn-dependent membrane protease YugP 226 650069387 311 35.14 1 294 1 292 5.0e-46 178 COG0583 DNA-binding transcriptional regulator, LysR family 297 650069388 204 33.94 1 204 2 217 3.0e-16 78.6 COG0705 Membrane associated serine protease, rhomboid family 228 650069390 172 58.06 10 161 5 158 3.0e-56 210 COG2077 Peroxiredoxin 158 650069393 276 29.29 11 247 1 208 1.0e-24 107 COG5578 Uncharacterized membrane protein YesL 208 650069395 536 46.12 1 477 28 509 2.0e-124 439 COG0513 Superfamily II DNA and RNA helicase 513 650069396 273 36.56 1 273 9 287 2.0e-50 193 COG1284 Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains 289 650069398 394 41.27 70 387 64 386 2.0e-61 230 COG1306 Uncharacterized protein 400 650069400 391 30.65 1 385 74 454 9.0e-52 197 COG0534 Na+-driven multidrug efflux pump 455 650069401 323 50.29 5 323 3 342 1.0e-101 363 COG0205 6-phosphofructokinase 347 650069403 379 19.57 1 369 22 391 6.0e-05 42.1 COG2814 Predicted arabinose efflux permease, MFS family 394 650069404 65 63.64 1 65 2 67 2.0e-21 93.7 COG1278 Cold shock protein, CspA family 67 650069408 519 44.38 1 519 75 597 0.0e+00 475 COG1164 Oligoendopeptidase F 598 650069409 109 40.51 1 78 20 98 6.0e-13 65.7 COG5416 Uncharacterized integral membrane protein 98 650069410 345 33.43 9 345 2 344 3.0e-84 305 COG1363 Putative aminopeptidase FrvX 355 650069411 651 42.3 1 530 1 527 0.0e+00 528 COG0488 ATPase components of ABC transporters with duplicated ATPase domains 530 650069412 268 25.65 1 267 11 247 6.0e-27 114 COG1836 Uncharacterized membrane protein 247 650069413 207 38.78 5 194 59 250 5.0e-42 164 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 266 650069414 257 35.39 6 234 9 248 2.0e-38 152 COG0584 Glycerophosphoryl diester phosphodiesterase 257 650069415 438 31.06 159 431 82 371 5.0e-32 132 COG2843 Poly-gamma-glutamate biosynthesis protein CapA/YwtB (capsule formation), metallophosphatase superfamily 372 650069416 313 33.64 1 307 2 314 8.0e-71 260 COG0276 Protoheme ferro-lyase (ferrochelatase) 320 650069417 352 48.71 1 343 4 351 7.0e-107 380 COG0407 Uroporphyrinogen-III decarboxylase 352 650069418 403 19.24 8 401 15 394 1.0e-18 88 COG2814 Predicted arabinose efflux permease, MFS family 394 650069419 210 40.48 6 210 13 218 2.0e-36 145 COG4122 Predicted O-methyltransferase YrrM 219 650069420 382 46.05 3 377 2 381 7.0e-116 410 COG0116 23S rRNA G2445 N2-methylase RlmL 381 650069421 661 29.28 25 656 29 640 2.0e-85 310 COG1368 Phosphoglycerol transferase MdoB or a related enzyme of AlkP superfamily 650 650069423 486 27.91 2 354 6 371 1.0e-45 177 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650069425 106 33.33 2 101 16 117 7.0e-13 65.6 COG1695 DNA-binding transcriptional regulator, PadR family 138 650069428 100 33.33 5 92 7 96 1.0e-08 51.4 COG0316 Fe-S cluster assembly iron-binding protein IscA 110 650069430 400 17.47 114 391 112 374 2.0e-11 63.9 COG2866 Murein tripeptide amidase MpaA 374 650069431 268 47.24 1 253 4 256 9.0e-83 300 COG0796 Glutamate racemase 269 650069432 365 60.17 10 363 7 348 0.0e+00 473 COG4362 Nitric oxide synthase, oxygenase domain 355 650069435 140 29.71 2 139 1 136 2.0e-12 65.3 COG2445 Uncharacterized conserved protein YutE, UPF0331/DUF86 family 138 650069437 478 43 1 478 16 485 0.0e+00 472 COG2509 Uncharacterized FAD-dependent dehydrogenase 486 650069448 227 26.89 11 205 6 210 2.0e-09 56.4 COG3714 Uncharacterized membrane protein YhhN 212 650069449 237 37.23 4 234 3 220 3.0e-42 165 COG1285 Uncharacterized membrane protein YhiD, involved in acid resistance 221 650069452 270 43.02 1 262 5 268 2.0e-60 225 COG0647 Ribonucleotide monophosphatase NagD, HAD superfamily 269 650069453 587 40.73 10 548 1 532 1.0e-128 453 COG0578 Glycerol-3-phosphate dehydrogenase 532 650069454 302 34.21 189 302 8 121 4.0e-21 95.7 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650069455 352 35.93 1 352 1 340 7.0e-68 250 COG0673 Predicted dehydrogenase 342 650069456 285 25.95 1 284 3 274 3.0e-26 112 COG1082 Sugar phosphate isomerase/epimerase 274 650069457 298 23.97 14 295 10 270 2.0e-21 96.1 COG1082 Sugar phosphate isomerase/epimerase 274 650069458 305 26.21 1 281 3 277 1.0e-40 160 COG0673 Predicted dehydrogenase 342 650069459 295 30.65 4 254 2 251 3.0e-27 115 COG1082 Sugar phosphate isomerase/epimerase 274 650069461 402 44.67 6 389 1 393 2.0e-109 389 COG0436 Aspartate/methionine/tyrosine aminotransferase 393 650069462 332 39.74 1 293 3 314 5.0e-70 258 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 317 650069463 485 31.81 10 485 2 458 2.0e-95 343 COG1167 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain 459 650069466 474 26.53 7 469 5 430 2.0e-53 203 COG3669 Alpha-L-fucosidase 430 650069467 522 25.41 8 367 16 349 4.0e-20 93.2 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069468 298 35.74 13 297 8 281 4.0e-42 165 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069469 322 44.01 17 322 1 309 3.0e-87 315 COG4209 ABC-type polysaccharide transport system, permease component 309 650069481 362 28.83 121 338 46 265 3.0e-25 109 COG0739 Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain 277 650069487 97 31.82 1 64 1 66 7.0e-06 42.3 COG2002 Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module 89 650069495 305 28.57 8 297 2 291 4.0e-38 151 COG4974 Site-specific recombinase XerD 300 650069496 965 42.77 628 950 1 322 2.0e-78 288 COG4644 Transposase and inactivated derivatives, TnpA family 323 650069502 235 30.56 29 228 81 295 5.0e-27 114 COG4974 Site-specific recombinase XerD 300 650069507 186 30.58 2 186 39 228 1.0e-20 92.8 COG0860 N-acetylmuramoyl-L-alanine amidase 231 650069511 530 38.81 1 514 4 489 3.0e-93 336 COG0286 Type I restriction-modification system, DNA methylase subunit 489 650069512 389 19.44 18 388 1 388 6.0e-24 105 COG0732 Restriction endonuclease S subunit 391 650069513 1051 26.05 6 988 1 907 1.0e-88 322 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ... 962 650069517 220 36.61 4 183 2 184 4.0e-41 161 COG4185 Predicted ABC-type ATPase 187 650069527 73 35 2 61 5 60 8.0e-04 35.6 COG1476 DNA-binding transcriptional regulator, XRE-family HTH domain 68 650069530 640 31.38 4 539 49 558 1.0e-93 337 COG0550 DNA topoisomerase IA 570 650069539 322 23.68 2 316 1 314 3.0e-34 139 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650069540 396 49.09 8 390 5 388 2.0e-127 449 COG0156 7-keto-8-aminopelargonate synthetase or related enzyme 388 650069541 300 21.78 1 299 1 292 6.0e-26 111 COG0583 DNA-binding transcriptional regulator, LysR family 297 650069546 833 48.17 129 831 227 932 0.0e+00 860 COG0178 Excinuclease UvrABC ATPase subunit 935 650069549 453 28.63 2 448 1 433 1.0e-50 194 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069550 274 40.36 4 273 7 281 7.0e-54 204 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069551 308 41.3 17 308 2 294 4.0e-57 215 COG1175 ABC-type sugar transport system, permease component 295 650069553 219 33.95 1 212 2 215 3.0e-34 138 COG0235 Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase 219 650069554 426 52.12 47 424 2 379 2.0e-104 373 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component 379 650069555 166 27.78 1 161 2 163 1.0e-15 76.1 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component 177 650069556 328 40.24 3 324 2 326 4.0e-83 301 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component 332 650069557 341 38.29 1 340 2 350 6.0e-70 258 COG1063 Threonine dehydrogenase or related Zn-dependent dehydrogenase 350 650069558 218 30.56 2 216 4 218 1.0e-31 130 COG1802 DNA-binding transcriptional regulator, GntR family 230 650069559 463 28.44 6 455 1 410 3.0e-61 229 COG3395 Uncharacterized conserved protein YgbK, DUF1537 family 413 650069560 397 40.09 183 391 1 208 2.0e-52 200 COG2140 Oxalate decarboxylase/archaeal phosphoglucose isomerase, cupin superfamily 209 650069562 143 31.43 34 138 19 123 3.0e-12 64.6 COG1846 DNA-binding transcriptional regulator, MarR family 126 650069564 224 38.5 12 208 12 207 5.0e-42 164 COG4122 Predicted O-methyltransferase YrrM 219 650069565 295 31.53 1 294 1 290 7.0e-35 141 COG0583 DNA-binding transcriptional regulator, LysR family 297 650069567 349 28.77 10 300 7 292 8.0e-33 134 COG1879 ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain 322 650069568 329 38.24 13 316 2 305 2.0e-52 199 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component 316 650069569 350 40.38 28 338 3 311 2.0e-56 213 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component 316 650069570 504 49.8 1 496 4 500 0.0e+00 619 COG1129 ABC-type sugar transport system, ATPase component 500 650069572 252 48.7 9 234 10 226 6.0e-68 250 COG4312 Predicted dithiol-disulfide oxidoreductase, DUF899 family 247 650069573 542 21.32 4 539 2 475 5.0e-44 172 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650069575 350 31.82 52 314 33 296 9.0e-42 164 COG1879 ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain 322 650069576 309 29.93 21 308 6 281 2.0e-41 163 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069577 303 41.91 1 303 7 309 3.0e-81 295 COG4209 ABC-type polysaccharide transport system, permease component 309 650069578 114 44.44 19 108 15 104 1.0e-22 98.2 COG1733 DNA-binding transcriptional regulator, HxlR family 120 650069579 389 35.34 3 382 12 391 2.0e-52 199 COG2814 Predicted arabinose efflux permease, MFS family 394 650069583 359 41.46 1 353 4 352 2.0e-92 333 COG3842 ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components 352 650069584 570 27.57 11 564 14 539 7.0e-45 175 COG1178 ABC-type Fe3+ transport system, permease component 540 650069585 373 26.85 80 366 1 292 8.0e-25 108 COG1840 ABC-type Fe3+ transport system, periplasmic component 299 650069586 307 31.67 1 299 1 295 5.0e-40 158 COG0583 DNA-binding transcriptional regulator, LysR family 297 650069587 453 28.25 11 451 10 404 3.0e-55 209 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase 409 650069588 379 37.24 1 379 2 350 2.0e-77 283 COG1063 Threonine dehydrogenase or related Zn-dependent dehydrogenase 350 650069593 330 26.75 1 320 4 311 3.0e-36 145 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650069594 90 24.44 1 89 11 100 1.0e-06 44.6 COG1359 Quinol monooxygenase YgiN 100 650069595 275 34.75 158 275 5 122 5.0e-24 104 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650069596 449 26.8 32 347 1 321 6.0e-34 139 COG3669 Alpha-L-fucosidase 430 650069597 119 20.87 9 114 14 124 1.0e-05 41.8 COG3324 Predicted enzyme related to lactoylglutathione lyase 127 650069598 277 34.41 1 273 1 279 2.0e-49 189 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069599 296 36.21 10 295 4 288 1.0e-47 183 COG1175 ABC-type sugar transport system, permease component 295 650069600 466 27.17 40 457 23 429 4.0e-35 142 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069601 162 52.53 3 159 2 158 2.0e-38 152 COG5500 Uncharacterized membrane protein 159 650069604 410 25.7 36 410 24 401 1.0e-29 124 COG0402 Cytosine/adenosine deaminase or related metal-dependent hydrolase 421 650069606 295 31.54 1 294 1 294 6.0e-36 144 COG0583 DNA-binding transcriptional regulator, LysR family 297 650069608 617 39.41 27 602 2 567 2.0e-127 449 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650069609 554 37.18 1 546 36 567 5.0e-111 395 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650069610 278 17.43 53 270 42 252 7.0e-06 44.8 COG1682 ABC-type polysaccharide/polyol phosphate export permease 263 650069611 313 37.94 1 309 1 293 2.0e-71 262 COG1131 ABC-type multidrug transport system, ATPase component 293 650069612 272 30.13 1 212 1 229 1.0e-26 113 COG0702 Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains 275 650069613 300 29.74 1 297 5 310 2.0e-41 163 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650069615 539 18.91 56 448 16 402 2.0e-15 77.8 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069616 294 33.33 9 293 8 281 1.0e-47 183 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069617 319 47.99 22 319 12 309 5.0e-95 341 COG4209 ABC-type polysaccharide transport system, permease component 309 650069618 346 33.82 2 340 1 328 8.0e-65 241 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650069619 394 33.25 5 387 13 394 1.0e-56 213 COG2814 Predicted arabinose efflux permease, MFS family 394 650069620 91 27.47 1 91 10 98 4.0e-06 42.9 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650069622 356 57.24 75 356 1 283 4.0e-107 381 COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 286 650069624 318 38 13 311 2 287 7.0e-52 197 COG3481 3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily 287 650069626 236 27.52 122 230 1 108 2.0e-12 66.3 COG0789 DNA-binding transcriptional regulator, MerR family 124 650069628 285 27.5 52 131 20 99 3.0e-04 39.7 COG2076 Multidrug transporter EmrE and related cation transporters 106 650069629 373 21.45 40 365 35 355 9.0e-07 48.4 COG4225 Rhamnogalacturonyl hydrolase YesR 357 650069632 503 21.35 1 367 2 351 9.0e-18 85.5 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069633 336 49.84 32 336 5 309 1.0e-102 366 COG4209 ABC-type polysaccharide transport system, permease component 309 650069634 754 34.43 633 753 2 123 2.0e-22 101 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650069635 305 38.24 1 299 1 300 5.0e-65 241 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650069636 451 41.82 13 451 12 450 3.0e-112 399 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) 451 650069638 448 31.96 1 446 3 459 5.0e-91 328 COG1167 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain 459 650069640 221 27.05 1 207 2 196 2.0e-22 99.1 COG2364 Uncharacterized membrane protein YczE 210 650069646 284 26.33 1 273 1 296 7.0e-24 104 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650069647 239 29.19 1 201 6 207 2.0e-30 125 COG0300 Short-chain dehydrogenase 265 650069648 531 61.33 21 531 18 528 0.0e+00 755 COG1866 Phosphoenolpyruvate carboxykinase, ATP-dependent 529 650069650 336 48.8 5 333 4 334 6.0e-107 380 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 335 650069651 381 34.64 1 366 2 385 6.0e-69 254 COG1027 Aspartate ammonia-lyase 471 650069652 450 37.73 18 449 4 442 3.0e-99 356 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 444 650069653 515 41.34 37 515 1 469 2.0e-125 442 COG1012 Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase 472 650069654 306 30.75 6 306 8 328 2.0e-42 166 COG0506 Proline dehydrogenase 391 650069655 580 39.96 60 580 53 559 3.0e-125 442 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains 560 650069661 323 29.19 1 322 4 311 2.0e-39 156 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650069663 368 40.33 1 357 1 328 2.0e-71 262 COG2070 NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family 336 650069665 271 21.03 39 270 33 258 1.0e-11 64 COG1682 ABC-type polysaccharide/polyol phosphate export permease 263 650069666 343 37.46 17 321 4 292 7.0e-73 267 COG1131 ABC-type multidrug transport system, ATPase component 293 650069667 318 44.81 2 307 3 307 2.0e-83 302 COG4189 Predicted transcriptional regulator 308 650069668 465 39.81 31 323 2 313 3.0e-64 239 COG3940 Beta-xylosidase, GH43 family 324 650069670 332 21.56 15 330 13 306 1.0e-29 123 COG2017 Galactose mutarotase or related enzyme 308 650069672 311 28.47 21 310 8 281 3.0e-43 169 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069673 323 47.74 16 323 1 309 4.0e-90 324 COG4209 ABC-type polysaccharide transport system, permease component 309 650069674 579 21.41 102 434 30 351 4.0e-16 80.1 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069675 232 25.17 1 226 42 314 7.0e-24 104 COG1262 Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain 314 650069676 318 41.67 7 317 5 309 1.0e-79 289 COG4209 ABC-type polysaccharide transport system, permease component 309 650069677 309 30.64 16 308 5 281 7.0e-40 158 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069678 587 24.12 245 576 127 453 3.0e-34 140 COG2972 Sensor histidine kinase YesM 456 650069680 506 15.98 8 362 2 349 6.0e-13 69.3 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069682 337 34.57 1 336 1 349 6.0e-66 244 COG1063 Threonine dehydrogenase or related Zn-dependent dehydrogenase 350 650069683 313 29.65 1 295 1 310 6.0e-47 181 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650069684 284 30.29 2 274 11 278 2.0e-45 176 COG3618 Predicted metal-dependent hydrolase, TIM-barrel fold 279 650069685 292 34.21 175 288 8 121 1.0e-22 100 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650069686 149 32.11 38 146 16 123 1.0e-08 53 COG1846 DNA-binding transcriptional regulator, MarR family 126 650069689 112 20.2 16 109 28 125 2.0e-03 34.6 COG5649 Uncharacterized protein 132 650069690 165 31.17 8 160 1 149 5.0e-24 104 COG3832 Uncharacterized conserved protein YndB, AHSA1/START domain 149 650069695 157 60.93 1 151 1 151 6.0e-54 203 COG1327 Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains 156 650069698 199 47.24 1 199 3 196 3.0e-47 181 COG0237 Dephospho-CoA kinase 201 650069699 247 21.62 4 221 2 190 2.0e-11 62.9 COG1971 Putative Mn2+ efflux pump MntP 190 650069700 278 49.28 1 274 1 273 3.0e-94 338 COG0266 Formamidopyrimidine-DNA glycosylase 273 650069701 219 35.94 4 219 10 226 5.0e-37 147 COG0704 Phosphate uptake regulator 240 650069702 251 68.53 1 251 4 253 3.0e-123 434 COG1117 ABC-type phosphate transport system, ATPase component 253 650069703 291 41.4 9 289 6 290 1.0e-61 230 COG0581 ABC-type phosphate transport system, permease component 292 650069704 244 47.81 2 244 62 310 3.0e-60 225 COG0573 ABC-type phosphate transport system, permease component 310 650069705 332 29.7 4 323 1 318 5.0e-54 204 COG0226 ABC-type phosphate transport system, periplasmic component 318 650069707 239 45.26 2 231 4 229 5.0e-63 234 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650069708 604 34.26 140 601 1 454 1.0e-76 281 COG5002 Signal transduction histidine kinase 459 650069709 323 23.78 13 318 12 311 3.0e-24 106 COG0385 Predicted Na+-dependent transporter 319 650069711 288 38 40 283 1 249 1.0e-59 223 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650069714 313 46.13 6 311 1 307 2.0e-95 342 COG0039 Malate/lactate dehydrogenase 313 650069715 430 65.64 11 430 2 406 0.0e+00 601 COG0538 Isocitrate dehydrogenase 407 650069716 370 52.24 1 370 14 390 7.0e-126 443 COG0372 Citrate synthase 390 650069718 372 25.48 3 362 7 345 3.0e-27 116 COG0628 Predicted PurR-regulated permease PerM 355 650069719 130 40.35 1 114 1 114 8.0e-20 89.5 COG3030 Protein affecting phage T7 exclusion by the F plasmid, UPF0716 family 158 650069720 169 32.9 8 161 1 135 1.0e-24 106 COG0824 Acyl-CoA thioesterase FadM 137 650069721 475 60.13 1 471 4 477 0.0e+00 631 COG0469 Pyruvate kinase 477 650069722 330 60.63 1 315 1 315 7.0e-129 453 COG0825 Acetyl-CoA carboxylase alpha subunit 317 650069723 297 62.36 25 292 12 282 2.0e-106 378 COG0777 Acetyl-CoA carboxylase beta subunit 294 650069725 164 30.32 6 151 6 160 2.0e-27 115 COG1267 Phosphatidylglycerophosphatase A 160 650069727 1143 53.64 1 1076 1 1060 0.0e+00 1299 COG0587 DNA polymerase III, alpha subunit 1139 650069731 444 47.24 9 442 2 432 0.0e+00 468 COG4109 Predicted transcriptional regulator containing CBS domains 432 650069733 115 33.33 1 111 3 113 2.0e-14 71.4 COG3679 Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development) 118 650069734 388 27.23 7 386 7 375 4.0e-47 182 COG4399 Uncharacterized membrane protein YheB, UPF0754 family 376 650069735 464 16.57 127 457 19 313 1.0e-07 51.5 COG0189 Glutathione synthase/RimK-type ligase, ATP-grasp superfamily 318 650069736 378 17.08 11 360 4 310 9.0e-05 41.9 COG0189 Glutathione synthase/RimK-type ligase, ATP-grasp superfamily 318 650069740 402 19.83 28 358 22 314 2.0e-10 60.4 COG0189 Glutathione synthase/RimK-type ligase, ATP-grasp superfamily 318 650069741 228 27.19 12 223 6 216 6.0e-25 107 COG0546 Phosphoglycolate phosphatase, HAD superfamily 220 650069745 189 48.24 1 189 1 199 1.0e-63 235 COG3546 Mn-containing catalase (includes spore coat protein CotJC) 277 650069748 343 25.7 6 327 20 332 4.0e-20 92.7 COG0628 Predicted PurR-regulated permease PerM 355 650069749 441 42.66 9 439 2 426 8.0e-100 357 COG1253 Hemolysin or related protein, contains CBS domains 429 650069750 753 26.27 8 731 1 750 3.0e-82 300 COG2409 Uncharacterized membrane protein YdfJ, MMPL/SSD domain 937 650069751 353 31.37 7 316 25 344 8.0e-51 194 COG2206 HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant) 344 650069752 274 43.64 1 274 4 269 2.0e-55 209 COG1968 Undecaprenyl pyrophosphate phosphatase UppP 270 650069753 477 24.74 9 457 26 491 4.0e-55 209 COG0737 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family 517 650069754 245 29.76 4 84 1 84 1.0e-09 57.2 COG1977 Molybdopterin converting factor, small subunit 84 650069754 245 40.31 104 231 8 136 3.0e-38 151 COG0314 Molybdopterin synthase catalytic subunit 149 650069755 348 31.79 5 327 30 344 1.0e-48 187 COG2206 HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant) 344 650069756 465 48.51 33 463 1 412 0.0e+00 472 COG0719 Fe-S cluster assembly scaffold protein SufB 412 650069757 139 50 1 136 1 138 3.0e-40 157 COG0822 NifU homolog involved in Fe-S cluster formation 150 650069758 406 58.44 2 395 5 399 0.0e+00 516 COG0520 Selenocysteine lyase/Cysteine desulfurase 405 650069759 434 33.25 14 431 2 410 1.0e-91 330 COG0719 Fe-S cluster assembly scaffold protein SufB 412 650069760 260 64.63 7 251 6 249 1.0e-101 362 COG0396 Fe-S cluster assembly ATPase SufC 251 650069761 158 44.3 1 158 1 156 3.0e-44 170 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) 156 650069762 407 44.04 24 401 28 407 2.0e-110 392 COG4857 5-Methylthioribose kinase, methionine salvage pathway 408 650069763 359 57.35 15 359 3 345 9.0e-125 440 COG0182 Methylthioribose-1-phosphate isomerase (methionine salvage pathway), a paralog of eIF-2B alpha subunit 346 650069764 100 39.39 1 99 1 95 2.0e-22 96.9 COG3377 Uncharacterized protein YunC, DUF1805 family 95 650069766 126 48.41 1 126 1 124 7.0e-22 96 COG2363 Uncharacterized membrane protein YgdD, TMEM256/DUF423 family 124 650069768 386 34.6 9 385 4 422 9.0e-110 390 COG2718 Uncharacterized conserved protein YeaH/YhbH, required for sporulation, DUF444 family 423 650069770 730 33.68 9 378 12 379 9.0e-63 235 COG1835 Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains 386 650069771 278 42.45 4 278 12 285 3.0e-68 251 COG2897 3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains 285 650069772 219 40.35 3 218 2 228 5.0e-52 197 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650069773 466 29.04 134 463 15 334 5.0e-35 142 COG0642 Signal transduction histidine kinase 336 650069775 337 26.55 11 334 1 314 8.0e-39 154 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650069776 539 24.74 250 532 36 312 1.0e-27 118 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650069777 112 18.38 1 110 1 136 3.0e-04 37.5 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650069778 254 39.37 4 251 3 249 7.0e-45 174 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650069779 459 47.66 32 459 1 411 0.0e+00 515 COG0334 Glutamate dehydrogenase/leucine dehydrogenase 411 650069781 244 22.03 40 143 26 136 5.0e-04 38.4 COG4642 Uncharacterized conserved protein 139 650069783 468 36.1 3 399 1 397 6.0e-67 248 COG1696 D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily 425 650069784 130 17.74 7 130 5 119 2.0e-04 37.9 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650069785 253 43.31 5 251 1 251 1.0e-46 180 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650069787 284 34.31 5 106 20 121 1.0e-18 87.6 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650069789 875 27.24 13 867 6 890 2.0e-97 351 COG2909 ATP-, maltotriose- and DNA-dependent transcriptional regulator MalT 894 650069790 167 31.65 8 161 2 154 5.0e-15 74.2 COG3708 Predicted transcriptional regulator YdeE, contains AraC-type DNA-binding domain 157 650069793 396 57.43 1 396 1 397 0.0e+00 533 COG3007 Trans-2-enoyl-CoA reductase 398 650069794 249 42.13 1 246 2 251 1.0e-39 156 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650069795 299 22.77 1 299 1 292 6.0e-30 125 COG0583 DNA-binding transcriptional regulator, LysR family 297 650069799 165 26.21 17 159 2 138 1.0e-06 46 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650069800 127 24.56 1 111 8 121 5.0e-03 33.4 COG2259 Uncharacterized membrane protein YphA, DoxX/SURF4 family 142 650069801 151 35.48 22 144 1 124 3.0e-12 64.6 COG1846 DNA-binding transcriptional regulator, MarR family 126 650069803 349 38.72 1 346 2 348 1.0e-71 263 COG1063 Threonine dehydrogenase or related Zn-dependent dehydrogenase 350 650069804 342 34.53 7 331 1 328 3.0e-63 235 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650069805 434 42.21 3 434 2 442 3.0e-128 452 COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase 442 650069806 330 30.16 1 299 4 290 6.0e-30 125 COG2971 BadF-type ATPase, related to human N-acetylglucosamine kinase 301 650069807 297 30.79 1 296 1 281 1.0e-45 176 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069808 317 52.32 14 315 8 306 4.0e-94 338 COG4209 ABC-type polysaccharide transport system, permease component 309 650069809 292 29.2 180 292 11 123 1.0e-22 100 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650069811 285 39.6 180 280 22 122 5.0e-20 91.8 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650069817 117 38.05 5 117 1 113 2.0e-15 74.5 COG1695 DNA-binding transcriptional regulator, PadR family 138 650069818 177 22.94 7 174 27 183 2.0e-12 65.3 COG3216 Uncharacterized conserved protein, DUF2062 family 184 650069823 335 26.73 10 334 3 329 2.0e-40 159 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component 335 650069824 325 43.46 12 289 5 286 8.0e-70 257 COG2175 Taurine dioxygenase, alpha-ketoglutarate-dependent 286 650069825 286 38.6 1 227 1 224 8.0e-49 187 COG2323 Uncharacterized membrane protein YcaP, DUF421 family 224 650069827 320 31.53 9 311 1 306 3.0e-46 179 COG0524 Sugar or nucleoside kinase, ribokinase family 311 650069828 222 43.84 1 217 1 211 1.0e-56 213 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 211 650069830 284 25.99 25 247 3 215 4.0e-26 112 COG2220 L-ascorbate metabolism protein UlaG, beta-lactamase superfamily 258 650069833 478 48.28 198 312 3 118 1.0e-35 145 COG1445 Phosphotransferase system fructose-specific component IIB 122 650069834 303 46.43 1 302 1 308 1.0e-95 342 COG1105 Fructose-1-phosphate kinase or kinase (PfkB) 310 650069836 285 37.94 4 284 2 282 5.0e-67 248 COG1307 Fatty acid-binding protein DegV (function unknown) 282 650069838 324 52.71 1 319 1 331 3.0e-109 388 COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein 332 650069839 268 41.22 9 268 6 267 2.0e-69 255 COG1806 Regulator of PEP synthase PpsR, kinase-PPPase family (combines ADP:protein kinase and phosphorylase activities) 273 650069842 324 23 9 320 9 300 8.0e-35 141 COG0053 Divalent metal cation (Fe/Co/Zn/Cd) transporter 304 650069843 598 23.95 8 597 5 616 1.0e-64 241 COG1506 Dipeptidyl aminopeptidase/acylaminoacyl peptidase 620 650069844 463 35.61 1 463 7 495 0.0e+00 482 COG2719 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation (function unknown) 495 650069845 631 41.37 1 631 1 648 0.0e+00 658 COG2766 Predicted Ser/Thr protein kinase 649 650069846 244 33.64 9 224 42 220 4.0e-28 118 COG5482 Uncharacterized protein 229 650069849 218 29.65 6 203 2 200 3.0e-23 101 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650069854 154 58.06 1 154 1 155 4.0e-60 223 COG0219 tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain 155 650069856 362 50.56 4 359 5 362 9.0e-121 426 COG1932 Phosphoserine aminotransferase 365 650069858 278 31.07 5 277 8 281 5.0e-39 154 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069859 297 39.52 9 296 8 293 1.0e-49 190 COG1175 ABC-type sugar transport system, permease component 295 650069860 474 46.35 1 474 1 443 0.0e+00 509 COG0174 Glutamine synthetase 443 650069861 351 56.89 59 336 5 286 1.0e-101 363 COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 286 650069862 598 22.75 124 588 20 456 6.0e-42 166 COG2972 Sensor histidine kinase YesM 456 650069863 524 26.07 1 523 1 474 1.0e-55 210 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650069864 554 20.65 5 398 1 350 7.0e-19 89.3 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650069865 298 31.19 9 297 8 281 2.0e-44 173 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650069866 318 47.71 11 316 4 306 3.0e-92 332 COG4209 ABC-type polysaccharide transport system, permease component 309 650069867 298 42.24 1 273 20 288 5.0e-77 281 COG0761 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH 294 650069868 483 32.46 141 483 20 336 2.0e-45 176 COG0642 Signal transduction histidine kinase 336 650069869 228 47.81 4 227 2 228 8.0e-62 230 COG0745 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 229 650069870 550 41.58 249 535 62 340 9.0e-57 215 COG0265 Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain 347 650069871 217 42.25 4 215 1 209 3.0e-55 208 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650069872 365 29.07 3 334 24 365 5.0e-48 185 COG4585 Signal transduction histidine kinase 365 650069875 247 37.07 97 212 4 109 2.0e-23 103 COG3584 3D (Asp-Asp-Asp) domain 109 650069876 645 55.04 36 640 2 580 0.0e+00 745 COG0441 Threonyl-tRNA synthetase 589 650069878 377 39.84 2 364 6 367 2.0e-101 362 COG1060 2-iminoacetate synthase ThiH (tyrosine cleavage enzyme, thamine biosynthesis) 370 650069879 413 49.87 28 407 4 394 0.0e+00 476 COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase 396 650069880 386 49.36 1 382 1 393 0.0e+00 466 COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase 396 650069881 305 66.11 1 301 1 301 0.0e+00 488 COG1897 Homoserine trans-succinylase 307 650069883 311 34.23 21 311 26 322 1.0e-55 210 COG0598 Mg2+ and Co2+ transporter CorA 322 650069885 227 47.25 4 221 2 219 9.0e-56 210 COG4149 ABC-type molybdate transport system, permease component 225 650069886 279 43.46 16 274 9 256 8.0e-57 214 COG0725 ABC-type molybdate transport system, periplasmic component 258 650069887 296 43.14 1 292 5 299 1.0e-70 260 COG0258 5'-3' exonuclease 310 650069888 358 36.31 8 328 2 289 3.0e-68 252 COG0564 Pseudouridylate synthase, 23S rRNA- or tRNA-specific 289 650069889 186 51.89 1 184 5 184 8.0e-56 210 COG2096 Cob(I)alamin adenosyltransferase 184 650069891 166 32.21 1 149 3 149 3.0e-18 84.7 COG1522 DNA-binding transcriptional regulator, Lrp family 154 650069894 408 25.96 27 402 2 380 3.0e-44 173 COG0665 Glycine/D-amino acid oxidase (deaminating) 387 650069897 139 31.58 7 139 3 132 6.0e-22 96.8 COG3766 Uncharacterized membrane protein YjfL, UPF0719 family 133 650069898 789 46.12 3 788 1 753 0.0e+00 624 COG1193 dsDNA-specific endonuclease/ATPase MutS2 753 650069902 816 46.65 150 815 1 650 0.0e+00 622 COG0072 Phenylalanyl-tRNA synthetase beta subunit 650 650069903 344 53.62 1 340 2 335 7.0e-129 453 COG0016 Phenylalanyl-tRNA synthetase alpha subunit 335 650069904 627 35.84 3 569 2 529 2.0e-120 426 COG0488 ATPase components of ABC transporters with duplicated ATPase domains 530 650069914 500 42.89 38 500 37 484 1.0e-122 433 COG0260 Leucyl aminopeptidase 485 650069915 373 26.69 28 366 12 353 6.0e-39 155 COG3852 Signal transduction histidine kinase, nitrogen specific 363 650069917 179 52.27 5 176 4 178 5.0e-64 237 COG0450 Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin) 194 650069918 358 55.15 4 358 3 346 2.0e-119 422 COG0473 Isocitrate/isopropylmalate dehydrogenase 348 650069920 327 43.6 2 322 1 316 2.0e-81 295 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650069921 512 49.15 2 410 1 409 1.0e-117 417 COG0119 Isopropylmalate/homocitrate/citramalate synthases 409 650069922 330 68.58 1 330 1 331 0.0e+00 535 COG0059 Ketol-acid reductoisomerase 338 650069923 161 57.5 1 160 1 160 4.0e-46 177 COG0440 Acetolactate synthase, small subunit 163 650069924 580 54.15 24 575 2 549 0.0e+00 662 COG0028 Acetolactate synthase large subunit or other thiamine pyrophosphate-requiring enzyme 550 650069927 119 61.86 1 118 1 118 5.0e-40 156 COG0292 Ribosomal protein L20 118 650069928 66 50 1 62 1 62 3.0e-08 50.2 COG0291 Ribosomal protein L35 65 650069929 164 58.54 1 164 11 174 1.0e-60 225 COG0290 Translation initiation factor IF-3 176 650069930 412 21.58 4 405 16 425 4.0e-32 132 COG1215 Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase 439 650069931 369 22.99 2 366 4 355 9.0e-38 151 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 357 650069932 237 33.48 1 218 10 223 4.0e-42 164 COG0220 tRNA G46 methylase TrmB 227 650069935 322 37.85 5 322 2 311 3.0e-69 255 COG1482 Mannose-6-phosphate isomerase, class I 312 650069936 320 25.41 11 309 17 298 2.0e-40 159 COG2267 Lysophospholipase, alpha-beta hydrolase superfamily 298 650069938 587 22.57 8 397 23 432 6.0e-41 162 COG1032 Radical SAM superfamily enzyme YgiQ, UPF0313 family 490 650069939 261 31.86 2 114 15 127 6.0e-18 84.9 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650069941 120 18.52 7 117 6 138 1.0e-05 42.1 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650069942 271 39.78 8 187 1 135 6.0e-32 131 COG1586 S-adenosylmethionine decarboxylase or arginine decarboxylase 136 650069944 676 28.97 30 381 5 359 1.0e-46 181 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650069946 268 27.4 14 226 4 210 5.0e-16 78.4 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650069950 284 44.84 7 257 7 255 3.0e-68 252 COG2514 Catechol-2,3-dioxygenase 265 650069951 148 26.85 1 147 1 144 3.0e-19 88.1 COG1959 DNA-binding transcriptional regulator, IscR family 150 650069955 888 31.12 165 505 1 336 2.0e-40 161 COG0642 Signal transduction histidine kinase 336 650069958 385 28.07 1 374 1 361 6.0e-60 224 COG3947 Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains 361 650069960 154 22.08 1 150 7 158 2.0e-08 51.9 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650069961 191 31.89 10 187 1 185 1.0e-22 99.7 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650069962 485 34.48 21 480 4 454 9.0e-98 351 COG1167 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain 459 650069963 166 35.4 5 164 2 162 1.0e-35 142 COG1247 L-amino acid N-acyltransferase YncA 169 650069964 362 42.13 1 362 10 384 1.0e-87 316 COG0006 Xaa-Pro aminopeptidase 384 650069965 464 58.15 1 454 1 454 0.0e+00 534 COG1823 L-cystine uptake protein TcyP, sodium:dicarboxylate symporter family 458 650069966 273 33.33 4 273 1 246 2.0e-30 126 COG0368 Cobalamin synthase 246 650069967 192 51.67 7 186 3 174 1.0e-51 196 COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 175 650069968 356 42.17 7 356 1 338 5.0e-78 284 COG2038 NaMN:DMB phosphoribosyltransferase 347 650069969 261 39.92 1 253 2 254 4.0e-73 268 COG1120 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component 258 650069970 310 47.18 9 306 34 334 5.0e-63 234 COG0609 ABC-type Fe3+-siderophore transport system, permease component 334 650069971 335 28.28 8 335 2 319 3.0e-37 149 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650069973 246 27.71 3 245 1 200 1.0e-23 103 COG0406 Broad specificity phosphatase PhoE 208 650069974 325 43.3 1 320 3 320 4.0e-74 272 COG1270 Cobalamin biosynthesis protein CobD/CbiB 320 650069975 251 32.72 35 251 1 200 1.0e-31 130 COG1865 Adenosylcobinamide amidohydrolase 200 650069976 371 34.29 28 369 20 355 3.0e-67 249 COG0079 Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase 356 650069977 334 42.46 1 245 1 248 6.0e-55 207 COG0095 Lipoate-protein ligase A 248 650069979 300 22 1 297 2 292 4.0e-05 42.5 COG0697 Permease of the drug/metabolite transporter (DMT) superfamily 292 650069980 268 33.33 2 267 1 264 1.0e-48 186 COG0561 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases 264 650069981 253 33.67 122 216 1 98 9.0e-15 74 COG0789 DNA-binding transcriptional regulator, MerR family 124 650069982 261 23.32 4 237 2 240 2.0e-18 86.3 COG1235 Phosphoribosyl 1,2-cyclic phosphodiesterase 269 650069985 426 33.95 56 426 35 406 4.0e-67 249 COG4826 Serine protease inhibitor 410 650069986 205 24.46 5 185 4 186 4.0e-22 98.1 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650069987 352 34.87 7 348 3 343 2.0e-77 282 COG1613 ABC-type sulfate transport system, periplasmic component 348 650069988 265 40.91 2 265 20 280 1.0e-59 222 COG4208 ABC-type sulfate transport system, permease component 287 650069989 271 44.57 14 271 15 272 6.0e-55 207 COG0555 ABC-type sulfate transport system, permease component 274 650069990 133 44.2 1 132 2 137 6.0e-38 149 COG0432 Thiamin phosphate synthase YjbQ, UPF0047 family 137 650069991 197 23.53 1 186 3 189 2.0e-13 69.3 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650069992 210 40.39 2 202 1 203 6.0e-49 187 COG1739 Putative translation regulator, IMPACT (imprinted ancient) protein family 203 650069993 451 37.42 5 451 4 446 4.0e-123 435 COG0166 Glucose-6-phosphate isomerase 446 650069994 298 48.6 2 286 1 286 4.0e-76 278 COG2084 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase 286 650069996 105 43.33 13 102 4 93 1.0e-20 91.6 COG3123 Uncharacterized conserved protein YaiE, UPF0345 family 94 650069997 673 61.38 6 673 2 662 0.0e+00 1013 COG0021 Transketolase 663 650070001 329 41.85 12 327 12 327 5.0e-65 241 COG0714 MoxR-like ATPase 329 650070004 309 39.41 1 305 4 293 1.0e-72 266 COG1131 ABC-type multidrug transport system, ATPase component 293 650070005 799 21.58 146 346 24 247 5.0e-03 36.9 COG5426 Uncharacterized membrane protein 254 650070006 299 57.04 17 299 5 287 9.0e-118 416 COG0788 Formyltetrahydrofolate hydrolase 287 650070007 373 39.65 1 282 1 272 5.0e-77 281 COG0648 Endonuclease IV 280 650070019 292 39.79 6 292 8 290 4.0e-63 235 COG2333 Metal-dependent hydrolase, beta-lactamase superfamily II 293 650070025 290 21.31 1 287 3 275 2.0e-11 63.4 COG4965 Flp pilus assembly protein TadB 309 650070026 285 23.71 58 285 87 309 3.0e-23 102 COG4965 Flp pilus assembly protein TadB 309 650070027 415 47.94 38 377 21 355 2.0e-95 343 COG4962 Pilus assembly protein, ATPase of CpaF family 355 650070028 383 16.36 129 342 4 216 5.0e-07 49.4 COG1192 Cellulose biosynthesis protein BcsQ 259 650070030 472 42.41 23 467 3 440 4.0e-113 402 COG3182 Uncharacterized iron-regulated membrane protein 442 650070032 141 50 13 140 10 137 3.0e-31 127 COG3011 Predicted thiol-disulfide oxidoreductase YuxK, DCC family 137 650070034 80 41.89 7 80 1 68 7.0e-13 65.4 COG3478 Predicted nucleic-acid-binding protein, contains Zn-ribbon domain 68 650070035 139 50 1 139 4 143 3.0e-40 157 COG1764 Organic hydroperoxide reductase OsmC/OhrA 143 650070037 120 24.11 3 113 1 112 7.0e-04 36.2 COG1396 Transcriptional regulator, contains XRE-family HTH domain 120 650070039 529 35.23 273 528 6 259 3.0e-44 173 COG2819 Predicted hydrolase of the alpha/beta superfamily 264 650070040 339 41.79 7 339 3 331 3.0e-56 212 COG0609 ABC-type Fe3+-siderophore transport system, permease component 334 650070041 335 36.28 10 331 6 331 2.0e-48 186 COG0609 ABC-type Fe3+-siderophore transport system, permease component 334 650070042 336 28.71 39 334 16 312 6.0e-34 138 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 319 650070043 555 36.79 187 292 22 127 4.0e-21 96.9 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650070050 165 38.22 4 156 1 152 4.0e-36 144 COG3091 Predicted Zn-dependent metalloprotease, SprT family 156 650070054 185 22.22 4 181 26 194 1.0e-15 76.3 COG5516 Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 196 650070055 147 17.14 1 130 1 137 7.0e-06 43.3 COG1246 N-acetylglutamate synthase or related acetyltransferase, GNAT family 153 650070056 737 54.78 16 737 3 733 0.0e+00 870 COG2183 Transcriptional accessory protein Tex/SPT6 780 650070058 116 45.13 1 113 1 112 1.0e-27 114 COG2337 mRNA-degrading endonuclease, toxin component of the MazEF toxin-antitoxin module 112 650070060 395 43.8 4 380 1 360 3.0e-109 388 COG0787 Alanine racemase 360 650070066 189 30.06 11 183 1 173 3.0e-33 134 COG1510 DNA-binding transcriptional regulator GbsR, MarR family 177 650070067 400 59.64 1 391 2 386 0.0e+00 487 COG4175 ABC-type proline/glycine betaine transport system, ATPase component 386 650070068 277 60.87 2 277 9 284 7.0e-92 330 COG4176 ABC-type proline/glycine betaine transport system, permease component 290 650070072 325 37.69 2 325 1 329 4.0e-73 268 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650070076 276 61.68 1 274 1 274 6.0e-96 343 COG5564 Predicted TIM-barrel enzyme 276 650070077 403 44.8 1 402 2 400 6.0e-105 374 COG5441 Uncharacterized protein, UPF0261 family 401 650070078 401 28.93 276 396 2 122 4.0e-22 99.6 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650070078 401 44.12 4 274 5 275 3.0e-67 249 COG5564 Predicted TIM-barrel enzyme 276 650070079 211 30.11 6 175 1 172 4.0e-19 88.2 COG3576 Predicted flavin-nucleotide-binding protein, pyridoxine 5'-phosphate oxidase superfamily 173 650070080 270 38.75 3 270 2 267 5.0e-54 204 COG1968 Undecaprenyl pyrophosphate phosphatase UppP 270 650070097 423 34.68 6 372 1 354 4.0e-72 265 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 354 650070098 309 35.86 6 293 1 275 3.0e-63 235 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 354 650070102 236 55.41 1 231 1 230 6.0e-81 293 COG1794 Aspartate/glutamate racemase 230 650070117 162 20.99 1 160 5 155 5.0e-05 40.7 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650070123 542 49.64 1 530 2 523 0.0e+00 497 COG0459 Chaperonin GroEL (HSP60 family) 524 650070124 93 65.96 1 93 2 95 1.0e-29 121 COG0234 Co-chaperonin GroES (HSP10) 96 650070125 259 35.57 1 248 1 253 7.0e-49 187 COG0805 Sec-independent protein secretion pathway component TatC 255 650070126 78 33.78 1 74 1 74 2.0e-09 53.8 COG1826 Sec-independent protein translocase protein TatA 94 650070127 163 45.21 4 148 9 152 4.0e-34 137 COG0521 Molybdopterin biosynthesis enzyme MoaB 169 650070128 158 61.54 1 156 2 157 5.0e-59 220 COG0315 Molybdenum cofactor biosynthesis enzyme 157 650070129 220 34.55 14 204 5 186 1.0e-35 143 COG0212 5-formyltetrahydrofolate cyclo-ligase 191 650070130 650 44.1 1 538 2 529 0.0e+00 555 COG0488 ATPase components of ABC transporters with duplicated ATPase domains 530 650070131 507 47.36 6 414 1 409 2.0e-112 400 COG0119 Isopropylmalate/homocitrate/citramalate synthases 409 650070132 347 50.75 12 342 2 335 2.0e-121 429 COG0533 tRNA A37 threonylcarbamoyltransferase TsaD 342 650070133 174 30.18 11 162 9 177 2.0e-18 85.4 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650070134 263 31.45 13 258 4 219 1.0e-36 147 COG1214 tRNA A37 threonylcarbamoyladenosine modification protein TsaB 220 650070135 156 48.3 1 145 3 149 2.0e-40 158 COG0802 tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaE 149 650070138 309 38.25 1 281 3 278 2.0e-71 262 COG1273 Non-homologous end joining protein Ku, dsDNA break repair 278 650070140 305 37.14 9 279 2 280 1.0e-61 230 COG3285 Eukaryotic-type DNA primase 299 650070141 362 36.88 4 263 8 252 4.0e-51 195 COG1533 DNA repair photolyase 297 650070142 305 46.81 25 302 7 288 3.0e-63 235 COG1284 Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains 289 650070143 476 36.48 39 476 1 438 3.0e-78 286 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase or related enzyme 438 650070145 137 33.33 12 119 22 129 6.0e-17 80 COG1664 Cytoskeletal protein CcmA, bactofilin family 146 650070146 257 19.64 46 255 54 277 1.0e-03 37.4 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 278 650070147 305 38 5 300 3 293 1.0e-67 250 COG1131 ABC-type multidrug transport system, ATPase component 293 650070149 312 27.85 1 312 1 296 8.0e-58 217 COG1316 Anionic cell wall polymer biosynthesis enzyme, LytR-Cps2A-Psr (LCP) family 307 650070150 182 25.49 12 161 1 133 1.0e-08 53.4 COG5652 VanZ like family protein (function unknown) 148 650070151 454 31.2 1 315 2 331 2.0e-54 206 COG0836 Mannose-1-phosphate guanylyltransferase 333 650070152 410 19.51 5 410 3 377 5.0e-14 72.4 COG0438 Glycosyltransferase involved in cell wall bisynthesis 381 650070153 429 18.43 27 383 19 377 6.0e-03 35.9 COG3307 O-antigen ligase 424 650070156 266 20.31 15 266 5 252 4.0e-10 59 COG0463 Glycosyltransferase involved in cell wall bisynthesis 291 650070157 455 21.34 2 418 14 413 6.0e-17 82.5 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 480 650070158 332 55.81 1 320 2 345 0.0e+00 484 COG1089 GDP-D-mannose dehydratase 345 650070159 323 28.75 12 312 2 310 4.0e-45 175 COG0451 Nucleoside-diphosphate-sugar epimerase 314 650070160 235 55.45 36 235 36 226 2.0e-60 225 COG2148 Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid) 226 650070161 297 61.17 1 291 1 290 6.0e-123 433 COG1210 UTP-glucose-1-phosphate uridylyltransferase 291 650070162 253 34.84 2 221 4 222 7.0e-38 150 COG3944 Capsular polysaccharide biosynthesis protein 226 650070164 726 41.07 153 712 16 567 0.0e+00 480 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650070170 229 41 13 209 29 227 6.0e-47 180 COG0489 Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster 265 650070172 122 35.71 6 61 5 60 6.0e-07 46.4 COG1476 DNA-binding transcriptional regulator, XRE-family HTH domain 68 650070174 1531 60.12 711 1200 1 483 0.0e+00 661 COG0069 Glutamate synthase domain 2 485 650070175 755 33.93 4 752 1 776 2.0e-116 413 COG1511 Uncharacterized membrane protein YhgE, phage infection protein (PIP) family 780 650070176 193 26.04 1 191 8 195 2.0e-10 58.9 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650070177 446 23.48 1 322 2 308 8.0e-36 145 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 357 650070178 227 31.02 1 227 7 250 6.0e-37 147 COG2220 L-ascorbate metabolism protein UlaG, beta-lactamase superfamily 258 650070180 189 30 11 189 2 178 6.0e-30 123 COG1514 2'-5' RNA ligase 180 650070181 317 39.86 31 309 34 314 9.0e-76 277 COG0111 Phosphoglycerate dehydrogenase or related dehydrogenase 324 650070184 368 22.01 12 366 2 330 7.0e-33 134 COG2141 Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) 336 650070185 471 30.89 7 463 17 412 4.0e-69 255 COG0232 dGTP triphosphohydrolase 412 650070187 261 47.97 6 153 46 189 2.0e-42 165 COG1705 Flagellum-specific peptidoglycan hydrolase FlgJ 201 650070188 150 32.31 8 137 4 133 1.0e-30 125 COG4824 Phage-related holin (Lysis protein) 133 650070196 239 14.98 22 239 40 262 6.0e-06 44.9 COG1652 Nucleoid-associated protein YgaU, contains BON and LysM domains 269 650070207 384 25.59 9 384 3 352 1.0e-34 141 COG3299 Uncharacterized phage protein gp47/JayE 353 650070223 198 21 1 189 4 203 2.0e-13 69.1 COG1280 Threonine/homoserine/homoserine lactone efflux protein 208 650070224 119 44.76 1 105 2 106 2.0e-23 100 COG2076 Multidrug transporter EmrE and related cation transporters 106 650070225 189 24.21 2 189 14 201 2.0e-07 48.9 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650070226 268 28.63 10 250 11 245 1.0e-21 97 COG0619 Energy-coupling factor transporter transmembrane protein EcfT 252 650070227 209 41.75 13 199 1 192 2.0e-32 132 COG4721 ABC-type thiamine/hydroxymethylpyrimidine transport system, permease component 192 650070228 267 30.08 5 256 2 239 2.0e-41 162 COG0688 Phosphatidylserine decarboxylase 239 650070229 283 36.69 5 249 4 238 8.0e-40 157 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650070232 487 37.03 17 484 5 456 3.0e-95 342 COG1167 DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain 459 650070233 204 25.61 1 162 3 159 6.0e-20 90.8 COG3467 Nitroimidazol reductase NimA or a related FMN-containing flavoprotein, pyridoxamine 5'-phosphate oxidase superfamily 166 650070234 432 23.1 21 430 1 393 5.0e-36 145 COG0436 Aspartate/methionine/tyrosine aminotransferase 393 650070235 404 23.69 1 398 1 375 1.0e-30 127 COG4473 Predicted ABC-type exoprotein transport system, permease component 379 650070238 448 34.43 1 448 26 481 3.0e-92 332 COG0513 Superfamily II DNA and RNA helicase 513 650070239 294 29.83 3 293 1 287 1.0e-40 160 COG0583 DNA-binding transcriptional regulator, LysR family 297 650070240 427 44.99 1 426 1 425 0.0e+00 504 COG0104 Adenylosuccinate synthase 430 650070241 249 19.23 12 239 25 282 7.0e-10 57.8 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650070242 289 27.93 1 288 28 309 7.0e-44 170 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650070244 239 33.33 2 239 22 263 4.0e-57 214 COG0300 Short-chain dehydrogenase 265 650070245 152 33.11 1 151 1 150 3.0e-25 108 COG1406 Chemotaxis protein CheX, a CheY~P-specific phosphatase 153 650070246 300 28.08 1 289 1 288 8.0e-43 167 COG0583 DNA-binding transcriptional regulator, LysR family 297 650070247 269 25.7 1 249 1 213 2.0e-25 109 COG1387 Histidinol phosphatase or related hydrolase of the PHP family 237 650070249 302 37.99 42 301 10 284 1.0e-46 180 COG1408 Predicted phosphohydrolase, MPP superfamily 284 650070250 459 33.94 5 435 36 469 2.0e-95 343 COG1012 Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase 472 650070252 266 37.04 1 265 6 244 4.0e-45 175 COG2746 Aminoglycoside N3'-acetyltransferase 251 650070253 254 36.36 9 249 1 233 1.0e-64 240 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 234 650070254 580 41.75 4 566 8 561 0.0e+00 534 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 562 650070255 223 20.87 3 113 17 130 4.0e-06 45.3 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 132 650070257 305 31.13 1 300 2 297 6.0e-34 138 COG0583 DNA-binding transcriptional regulator, LysR family 297 650070258 224 40.64 4 217 1 219 2.0e-43 168 COG0569 Trk K+ transport system, NAD-binding component 225 650070259 562 17.59 320 518 26 221 6.0e-04 39.5 COG1266 Membrane protease YdiL, CAAX protease family 226 650070260 669 45.95 15 664 2 581 0.0e+00 654 COG0322 Excinuclease UvrABC, nuclease subunit 581 650070265 249 38.46 1 247 1 229 3.0e-70 258 COG3253 Chlorite dismutase 230 650070267 397 38.54 5 396 4 396 5.0e-103 368 COG1252 NADH dehydrogenase, FAD-containing subunit 405 650070274 119 47.66 1 107 4 110 8.0e-33 132 COG0316 Fe-S cluster assembly iron-binding protein IscA 110 650070275 368 42.08 7 368 2 367 7.0e-102 364 COG1060 2-iminoacetate synthase ThiH (tyrosine cleavage enzyme, thamine biosynthesis) 370 650070276 352 30.73 1 352 3 384 6.0e-75 274 COG1252 NADH dehydrogenase, FAD-containing subunit 405 650070277 81 56.1 3 81 4 85 7.0e-19 85.4 COG0694 Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain 93 650070278 257 34.25 1 247 3 250 7.0e-39 154 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650070279 280 55.32 1 280 1 268 3.0e-91 328 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 268 650070280 222 55.96 5 222 5 222 1.0e-66 246 COG2011 ABC-type methionine transport system, permease component 222 650070281 338 54.73 1 337 1 337 1.0e-120 426 COG1135 ABC-type methionine transport system, ATPase component 339 650070283 589 36.07 1 460 1 454 5.0e-117 415 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase 477 650070284 300 26.24 3 277 42 313 1.0e-33 137 COG1612 Heme A synthase 323 650070287 541 21.76 1 504 2 479 1.0e-16 81.7 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 480 650070288 159 38.22 1 156 1 156 5.0e-19 87.2 COG2839 Uncharacterized conserved protein YqgC, DUF456 family 160 650070289 248 29.17 4 247 2 264 1.0e-49 189 COG0561 Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases 264 650070290 683 25.99 20 664 13 594 6.0e-82 299 COG0768 Cell division protein FtsI/penicillin-binding protein 2 599 650070293 383 20.39 23 378 34 393 3.0e-06 46.7 COG2814 Predicted arabinose efflux permease, MFS family 394 650070294 115 25.66 3 105 11 123 1.0e-11 61.5 COG1658 5S rRNA maturation endonuclease (Ribonuclease M5), contains TOPRIM domain 127 650070295 205 25.7 5 205 1 206 3.0e-27 115 COG1999 Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family 207 650070296 312 43.67 13 312 1 299 1.0e-77 283 COG0109 Polyprenyltransferase (heme O synthase) 304 650070299 328 52.87 1 306 5 314 8.0e-106 377 COG0180 Tryptophanyl-tRNA synthetase 314 650070300 329 26.11 8 319 8 305 2.0e-37 149 COG2017 Galactose mutarotase or related enzyme 308 650070304 610 28.83 17 607 10 597 2.0e-116 413 COG1164 Oligoendopeptidase F 598 650070306 235 23.98 10 199 15 210 3.0e-18 85.5 COG1655 Uncharacterized protein, DUF2225 family 267 650070307 125 46.67 6 125 8 127 7.0e-31 126 COG2346 Truncated hemoglobin YjbI 133 650070308 410 19.95 1 358 1 370 2.0e-25 110 COG3314 Uncharacterized membrane protein YjiH, contains nucleoside recognition GATE domain 427 650070309 290 27.54 22 290 17 279 1.0e-44 173 COG0061 NAD kinase 281 650070310 185 46.67 1 105 12 116 7.0e-29 120 COG4470 Uncharacterized protein YutD 126 650070311 297 61.48 8 290 24 306 4.0e-128 450 COG0320 Lipoate synthase 306 650070314 114 33.33 1 100 9 110 9.0e-08 49 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650070315 140 25.53 10 140 8 148 6.0e-12 63.2 COG3832 Uncharacterized conserved protein YndB, AHSA1/START domain 149 650070317 267 38.11 3 261 1 258 8.0e-55 207 COG0566 tRNA G18 (ribose-2'-O)-methylase SpoU 260 650070318 220 41.01 4 215 1 217 1.0e-47 182 COG0569 Trk K+ transport system, NAD-binding component 225 650070320 526 56 6 526 3 527 0.0e+00 769 COG4108 Peptide chain release factor RF-3 528 650070321 515 56.17 15 499 8 480 0.0e+00 633 COG0364 Glucose-6-phosphate 1-dehydrogenase 483 650070323 214 50.48 5 214 1 210 2.0e-59 222 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650070324 357 27.25 9 342 23 365 1.0e-48 187 COG4585 Signal transduction histidine kinase 365 650070325 214 19.81 5 212 29 233 3.0e-13 69.1 COG4758 Predicted membrane protein 235 650070326 228 37.67 1 222 1 221 2.0e-19 90 COG1842 Phage shock protein A 225 650070327 163 40 1 58 5 64 8.0e-15 73.3 COG1983 Phage shock protein PspC (stress-responsive transcriptional regulator) 70 650070328 225 25.68 1 220 1 221 4.0e-15 74.9 COG1842 Phage shock protein A 225 650070344 540 22.19 232 537 106 420 3.0e-33 136 COG3858 Spore germination protein YaaH 423 650070345 139 38.57 1 139 1 140 7.0e-38 149 COG0735 Fe2+ or Zn2+ uptake regulation protein 145 650070346 439 17.05 102 347 35 276 1.0e-05 45.1 COG3595 Uncharacterized conserved protein YvlB, contains DUF4097 and DUF4098 domains 318 650070348 237 41.95 12 185 10 179 4.0e-39 154 COG1285 Uncharacterized membrane protein YhiD, involved in acid resistance 221 650070350 479 59.88 1 478 1 481 0.0e+00 729 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit 483 650070351 485 54.56 1 484 2 475 0.0e+00 539 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase 475 650070352 95 56.84 1 95 1 95 5.0e-23 99.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 96 650070358 181 30.73 4 178 1 179 6.0e-27 114 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650070360 212 32.87 1 206 10 224 1.0e-29 123 COG0491 Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II 252 650070362 202 33.85 18 202 15 206 2.0e-28 118 COG0586 Uncharacterized membrane protein DedA, SNARE-associated domain 208 650070368 263 29.96 7 260 8 282 3.0e-29 122 COG0596 Pimeloyl-ACP methyl ester carboxylesterase 282 650070371 75 37.14 3 72 1 70 8.0e-11 58.5 COG4840 Uncharacterized protein YfkK, UPF0435 family 71 650070372 239 29.32 1 239 1 243 6.0e-21 94.6 COG1741 Redox-sensitive bicupin YhaK, pirin superfamily 276 650070373 334 32.61 4 323 12 332 7.0e-60 224 COG4448 L-asparaginase II 339 650070375 136 26.13 13 119 4 114 1.0e-08 52.3 COG4980 Gas vesicle protein 115 650070377 325 19.76 66 311 76 321 2.0e-28 120 COG0598 Mg2+ and Co2+ transporter CorA 322 650070378 256 32.26 6 253 3 246 2.0e-37 149 COG1191 DNA-directed RNA polymerase specialized sigma subunit 247 650070379 138 31.88 2 134 11 146 6.0e-18 83.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) 146 650070380 107 23.66 14 105 9 101 3.0e-09 53.9 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 117 650070381 559 38.91 137 391 82 326 3.0e-48 186 COG0642 Signal transduction histidine kinase 336 650070382 290 30.88 26 290 3 267 2.0e-51 195 COG1352 Methylase of chemotaxis methyl-accepting proteins 268 650070383 1219 34.77 504 781 83 333 8.0e-39 156 COG0642 Signal transduction histidine kinase 336 650070388 54 67.31 1 52 1 52 6.0e-03 32.5 COG5487 Uncharacterized membrane protein YtjA, UPF0391 family 54 650070390 149 32.99 33 129 20 116 4.0e-09 54.2 COG1846 DNA-binding transcriptional regulator, MarR family 126 650070393 292 41.18 1 287 1 289 9.0e-74 270 COG0053 Divalent metal cation (Fe/Co/Zn/Cd) transporter 304 650070395 541 42.13 1 529 3 529 0.0e+00 597 COG0488 ATPase components of ABC transporters with duplicated ATPase domains 530 650070396 343 28.41 57 313 8 234 2.0e-33 136 COG2220 L-ascorbate metabolism protein UlaG, beta-lactamase superfamily 258 650070398 343 20.58 1 338 5 344 9.0e-37 147 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 346 650070399 450 38.29 4 436 2 444 5.0e-104 371 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 457 650070402 484 52.61 10 483 41 519 0.0e+00 578 COG0833 Amino acid permease 541 650070405 211 41.71 1 210 2 211 2.0e-47 181 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 211 650070406 498 41.4 1 494 3 502 0.0e+00 464 COG1070 Sugar (pentulose or hexulose) kinase 502 650070407 438 58.72 1 435 3 438 0.0e+00 685 COG2115 Xylose isomerase 438 650070408 390 34.29 77 380 1 310 6.0e-55 208 COG1940 Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain 314 650070410 78 30 3 69 2 71 5.0e-10 56.1 COG0695 Glutaredoxin 80 650070411 313 54.05 1 308 3 305 2.0e-93 336 COG0492 Thioredoxin reductase 305 650070412 674 39.58 20 672 75 710 0.0e+00 571 COG2217 Cation transport ATPase 713 650070415 154 20.16 34 147 36 159 2.0e-07 48.3 COG1247 L-amino acid N-acyltransferase YncA 169 650070417 600 28 24 592 14 567 1.0e-65 244 COG1132 ABC-type multidrug transport system, ATPase and permease component 567 650070422 236 27.96 3 212 1 209 5.0e-23 101 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650070423 430 72 4 428 3 426 0.0e+00 696 COG2873 O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent 426 650070424 270 41.37 11 249 6 250 3.0e-43 168 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650070425 285 32.33 16 274 26 287 5.0e-42 165 COG1131 ABC-type multidrug transport system, ATPase component 293 650070427 229 32 3 176 1 175 2.0e-28 119 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650070428 734 13.62 1 248 1 257 1.0e-03 38.9 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 278 650070429 289 39.86 1 285 4 293 2.0e-70 259 COG1131 ABC-type multidrug transport system, ATPase component 293 650070430 301 40.26 1 291 1 307 2.0e-70 259 COG0667 Predicted oxidoreductase (related to aryl-alcohol dehydrogenase) 316 650070431 264 26.32 1 264 3 256 6.0e-06 45 COG0730 Uncharacterized membrane protein YfcA 258 650070436 679 42.21 1 675 8 673 0.0e+00 616 COG1874 Beta-galactosidase GanA 673 650070437 428 24.6 1 428 1 431 4.0e-35 142 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650070438 279 36.65 2 278 1 281 5.0e-52 198 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650070439 293 32.2 1 293 1 294 5.0e-52 198 COG1175 ABC-type sugar transport system, permease component 295 650070442 191 23.16 3 179 1 152 9.0e-16 76.9 COG0262 Dihydrofolate reductase 167 650070443 677 41.68 1 674 8 672 0.0e+00 625 COG1874 Beta-galactosidase GanA 673 650070445 570 22.25 4 396 1 349 7.0e-15 75.8 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650070446 302 31.4 15 301 8 281 5.0e-44 171 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650070447 320 49.35 11 320 2 309 8.0e-100 357 COG4209 ABC-type polysaccharide transport system, permease component 309 650070448 517 30.58 1 516 1 475 5.0e-74 272 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650070450 776 38.38 8 761 1 759 0.0e+00 646 COG1501 Alpha-glucosidase, glycosyl hydrolase family GH31 772 650070451 292 35.29 174 292 4 122 4.0e-23 101 COG2207 AraC-type DNA-binding domain and AraC-containing proteins 127 650070453 238 35.77 1 232 2 244 2.0e-42 165 COG3403 Uncharacterized protein YcgG, contains conserved FPC and CPF motifs 257 650070454 572 47.39 19 570 2 555 0.0e+00 612 COG0595 mRNA degradation ribonuclease J1/J2 555 650070455 404 22.03 7 347 5 338 2.0e-14 73.7 COG2814 Predicted arabinose efflux permease, MFS family 394 650070458 218 20.26 5 153 10 159 4.0e-14 71.4 COG1238 Uncharacterized membrane protein YqaA, SNARE-associated domain 161 650070459 307 51.33 38 300 1 260 1.0e-89 323 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 263 650070461 248 50.6 1 248 2 252 1.0e-92 332 COG0024 Methionine aminopeptidase 255 650070462 261 31.18 1 249 8 249 9.0e-37 147 COG0861 Membrane protein TerC, possibly involved in tellurium resistance 254 650070465 467 30.44 18 463 5 388 2.0e-60 227 COG0247 Fe-S oxidoreductase 388 650070466 487 42.27 10 459 2 457 9.0e-99 354 COG0277 FAD/FMN-containing dehydrogenase 459 650070467 396 42.23 9 394 2 368 1.0e-80 294 COG2377 1,6-Anhydro-N-acetylmuramate kinase 371 650070468 392 45.67 9 389 29 409 1.0e-118 419 COG3876 Uncharacterized conserved protein YbbC, DUF1343 family 409 650070471 368 52.91 1 361 1 338 6.0e-119 420 COG3839 ABC-type sugar transport system, ATPase component 338 650070472 277 41.28 1 276 2 281 1.0e-54 206 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650070473 305 37.02 14 299 1 287 5.0e-53 201 COG1175 ABC-type sugar transport system, permease component 295 650070474 464 20.38 1 464 1 432 1.0e-26 114 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650070475 278 38.69 5 278 6 279 3.0e-64 238 COG1737 DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains 281 650070476 318 29.15 1 318 4 301 5.0e-37 148 COG2971 BadF-type ATPase, related to human N-acetylglucosamine kinase 301 650070477 303 55.59 5 299 1 295 6.0e-104 370 COG2103 N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase 298 650070478 288 32.42 3 249 2 242 4.0e-34 138 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650070479 321 30 1 314 3 312 4.0e-37 148 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 319 650070480 433 60.14 1 432 2 435 0.0e+00 580 COG0213 Thymidine phosphorylase 435 650070481 235 63.4 1 235 2 236 1.0e-99 355 COG0813 Purine-nucleoside phosphorylase 236 650070482 392 62.31 4 392 1 397 0.0e+00 575 COG1015 Phosphopentomutase 397 650070483 392 47.89 1 392 1 403 8.0e-114 404 COG1972 Nucleoside permease NupC 404 650070484 311 39.23 1 310 7 317 7.0e-83 300 COG2390 DNA-binding transcriptional regulator LsrR, DeoR family 321 650070486 244 56.61 4 239 3 243 4.0e-91 327 COG4813 Trehalose utilization protein 261 650070490 156 22.22 1 154 4 160 7.0e-14 70 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650070492 133 38.35 1 128 1 133 2.0e-33 134 COG1959 DNA-binding transcriptional regulator, IscR family 150 650070494 200 24.87 1 196 3 193 3.0e-10 58.5 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650070496 220 23.25 1 220 1 206 2.0e-26 112 COG3341 RNase HI-related protein, contains viroplasmin and RNaseH domains 225 650070499 318 27.91 1 317 5 311 2.0e-45 176 COG2378 Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains 311 650070500 173 30.18 1 169 4 169 3.0e-28 118 COG2318 Uncharacterized damage-inducible protein DinB (forms a four-helix bundle) 172 650070501 176 51.45 4 176 5 177 7.0e-48 183 COG4843 Uncharacterized protein YebE, UPF0316 family 179 650070502 302 19.34 42 268 8 222 2.0e-08 53.8 COG5285 Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family 299 650070503 136 20.34 5 119 13 128 2.0e-04 38.3 COG1917 Cupin domain protein related to quercetin dioxygenase 131 650070504 430 35.68 18 424 27 447 5.0e-109 388 COG0160 4-aminobutyrate aminotransferase or related aminotransferase 447 650070505 170 18.18 1 138 4 157 1.0e-04 39.6 COG0456 Ribosomal protein S18 acetylase RimI and related acetyltransferases 177 650070506 280 58.73 27 278 1 240 9.0e-99 353 COG1126 ABC-type polar amino acid transport system, ATPase component 240 650070507 220 43.32 2 218 6 222 3.0e-53 201 COG0765 ABC-type amino acid transport system, permease component 222 650070508 217 43.78 1 216 7 222 9.0e-47 180 COG0765 ABC-type amino acid transport system, permease component 222 650070509 284 27.34 1 273 2 270 4.0e-26 112 COG0834 ABC-type amino acid transport/signal transduction system, periplasmic component/domain 275 650070512 247 41.96 1 245 1 251 1.0e-49 190 COG1028 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 251 650070513 203 30.48 12 198 5 176 2.0e-26 112 COG1853 NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family 176 650070514 315 31.39 7 130 2 138 2.0e-08 53.7 COG0346 Catechol 2,3-dioxygenase or other lactoylglutathione lyase family enzyme 138 650070515 359 30.43 14 357 9 350 4.0e-33 135 COG0628 Predicted PurR-regulated permease PerM 355 650070516 482 35.38 43 482 1 438 3.0e-86 312 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase or related enzyme 438 650070517 218 35.58 1 206 1 202 9.0e-45 173 COG1182 FMN-dependent NADH-azoreductase 202 650070518 179 33.33 54 170 3 122 1.0e-09 56.9 COG1846 DNA-binding transcriptional regulator, MarR family 126 650070519 136 59.84 6 132 3 129 1.0e-48 185 COG3607 Predicted lactoylglutathione lyase 133 650070520 248 21.82 62 171 20 126 3.0e-05 42.6 COG1846 DNA-binding transcriptional regulator, MarR family 126 650070522 1230 38.24 330 718 37 439 3.0e-93 337 COG3325 Chitinase, GH18 family 441 650070523 389 27.79 28 351 17 345 6.0e-42 165 COG1680 CubicO group peptidase, beta-lactamase class C family 390 650070524 110 48 9 106 4 102 3.0e-16 76.8 COG1695 DNA-binding transcriptional regulator, PadR family 138 650070525 185 23.6 7 174 5 182 8.0e-09 53.8 COG4709 Uncharacterized membrane protein 195 650070526 122 27.12 6 118 15 129 3.0e-04 37.2 COG4319 Ketosteroid isomerase homolog 137 650070538 569 28.84 80 555 8 461 1.0e-56 214 COG0471 Di- and tricarboxylate transporter 461 650070539 239 44.69 2 226 1 224 8.0e-62 230 COG4565 Response regulator of citrate/malate metabolism 224 650070540 537 38.83 13 536 6 532 4.0e-123 435 COG3290 Sensor histidine kinase regulating citrate/malate metabolism 537 650070541 321 43.55 28 310 5 290 2.0e-58 220 COG1175 ABC-type sugar transport system, permease component 295 650070542 278 38.46 9 277 11 281 1.0e-57 216 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650070544 539 25.6 1 538 1 472 1.0e-67 251 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650070545 429 22.4 5 429 1 430 1.0e-33 137 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650070546 610 52.37 1 610 1 597 0.0e+00 758 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 597 650070548 446 48.69 3 445 8 461 1.0e-118 420 COG1109 Phosphomannomutase 464 650070549 486 25.24 1 409 1 402 1.0e-37 151 COG4856 Uncharacterized protein, YbbR domain 403 650070550 276 56.72 9 245 10 247 3.0e-70 258 COG1624 Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain 247 650070551 212 15.69 11 210 4 203 2.0e-09 56.2 COG5662 Transmembrane transcriptional regulator (anti-sigma factor RsiW) 256 650070552 189 36.81 5 186 1 176 3.0e-33 134 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650070553 929 41.56 16 929 9 910 0.0e+00 884 COG2352 Phosphoenolpyruvate carboxylase 910 650070563 205 29.1 16 204 22 199 6.0e-14 71.1 COG1300 Uncharacterized membrane protein SpoIIM, required for sporulation 207 650070564 267 36.45 46 241 56 257 1.0e-34 140 COG0726 Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family 267 650070568 368 46.92 117 323 58 257 1.0e-52 200 COG0489 Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster 265 650070569 257 32.72 38 243 26 227 8.0e-42 164 COG0860 N-acetylmuramoyl-L-alanine amidase 231 650070570 389 57.03 1 384 1 378 0.0e+00 512 COG2046 ATP sulfurylase (sulfate adenylyltransferase) 397 650070571 230 45.78 14 230 19 242 5.0e-58 217 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme 261 650070572 549 17.52 49 415 52 361 4.0e-15 76.8 COG2814 Predicted arabinose efflux permease, MFS family 394 650070573 147 29.57 17 131 2 116 5.0e-15 73.8 COG1846 DNA-binding transcriptional regulator, MarR family 126 650070574 130 65.38 1 130 1 130 3.0e-48 183 COG0103 Ribosomal protein S9 130 650070575 145 63.45 2 145 1 145 5.0e-50 190 COG0102 Ribosomal protein L13 148 650070576 266 42.75 1 255 1 245 8.0e-74 270 COG0101 tRNA U38,U39,U40 pseudouridine synthase TruA 266 650070577 121 61.21 3 118 7 116 1.0e-39 155 COG0203 Ribosomal protein L17 116 650070578 314 55.63 4 314 1 308 3.0e-97 348 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 317 650070579 131 73.23 5 131 3 129 2.0e-49 187 COG0100 Ribosomal protein S11 129 650070580 122 66.94 1 121 1 121 7.0e-42 162 COG0099 Ribosomal protein S13 121 650070581 37 68.42 1 37 1 38 7.0e-05 39 COG0257 Ribosomal protein L36 38 650070582 71 71.83 1 71 1 71 1.0e-25 107 COG0361 Translation initiation factor IF-1 75 650070584 250 55.34 1 250 2 254 9.0e-90 323 COG0024 Methionine aminopeptidase 255 650070585 214 42.25 1 213 1 178 7.0e-49 187 COG0563 Adenylate kinase or related kinase 178 650070586 432 48.97 1 431 6 432 4.0e-114 405 COG0201 Preprotein translocase subunit SecY 436 650070587 146 57.62 1 146 1 151 3.0e-37 147 COG0200 Ribosomal protein L15 152 650070588 61 58.18 4 58 1 55 2.0e-13 67.4 COG1841 Ribosomal protein L30/L7E 55 650070589 165 65.06 1 165 15 180 1.0e-58 218 COG0098 Ribosomal protein S5 181 650070590 122 58.06 1 122 2 125 6.0e-35 139 COG0256 Ribosomal protein L18 125 650070591 180 58.99 1 178 1 178 5.0e-57 213 COG0097 Ribosomal protein L6P/L9E 178 650070592 132 62.12 1 132 1 132 6.0e-54 202 COG0096 Ribosomal protein S8 132 650070593 61 59.02 1 61 1 61 1.0e-17 81.4 COG0199 Ribosomal protein S14 61 650070594 180 65.92 2 180 1 179 1.0e-74 272 COG0094 Ribosomal protein L5 180 650070595 118 66.04 13 117 1 104 6.0e-23 99.6 COG0198 Ribosomal protein L24 104 650070596 122 73.77 1 122 1 122 1.0e-47 181 COG0093 Ribosomal protein L14 122 650070597 88 56.32 1 87 1 87 5.0e-22 96.1 COG0186 Ribosomal protein S17 87 650070598 65 56.25 2 65 4 67 9.0e-12 61.8 COG0255 Ribosomal protein L29 69 650070599 144 61.38 1 143 2 146 1.0e-50 191 COG0197 Ribosomal protein L16/L10AE 146 650070600 221 67 12 213 1 203 5.0e-78 284 COG0092 Ribosomal protein S3 233 650070601 110 64.55 1 110 9 118 3.0e-34 136 COG0091 Ribosomal protein L22 120 650070602 91 62.5 1 88 1 88 1.0e-35 141 COG0185 Ribosomal protein S19 93 650070603 276 66.67 1 276 1 275 6.0e-112 397 COG0090 Ribosomal protein L2 275 650070604 97 42.11 4 96 1 94 2.0e-19 87.6 COG0089 Ribosomal protein L23 94 650070605 207 52.13 1 207 1 211 2.0e-62 231 COG0088 Ribosomal protein L4 214 650070606 207 57.55 1 207 1 212 2.0e-72 265 COG0087 Ribosomal protein L3 218 650070607 102 75.49 1 102 1 102 1.0e-38 151 COG0051 Ribosomal protein S10 104 650070612 396 78.03 1 396 1 394 0.0e+00 688 COG0050 Translation elongation factor EF-Tu, a GTPase 394 650070613 693 66.62 4 693 3 695 0.0e+00 990 COG0480 Translation elongation factor EF-G, a GTPase 697 650070614 156 61.49 2 149 1 148 2.0e-58 218 COG0049 Ribosomal protein S7 148 650070615 139 70.59 1 136 7 129 1.0e-47 181 COG0048 Ribosomal protein S12 129 650070617 1204 49.54 10 858 7 808 0.0e+00 872 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 808 650070618 1181 66.97 378 1151 299 1060 0.0e+00 1169 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit 1060 650070620 120 67.21 1 120 3 124 2.0e-24 104 COG0222 Ribosomal protein L7/L12 124 650070621 167 53.75 4 162 2 161 3.0e-35 141 COG0244 Ribosomal protein L10 175 650070622 230 60.35 1 226 1 227 2.0e-80 292 COG0081 Ribosomal protein L1 228 650070623 141 69.29 2 141 1 140 3.0e-51 193 COG0080 Ribosomal protein L11 141 650070624 177 56.98 1 177 1 177 9.0e-48 182 COG0250 Transcription antitermination factor NusG 178 650070625 63 40.98 1 61 13 73 8.0e-08 48.5 COG0690 Preprotein translocase subunit SecE 73 650070626 49 61.22 1 49 2 50 4.0e-10 56.4 COG0267 Ribosomal protein L33 50 650070627 214 27.32 17 210 1 176 2.0e-17 82.8 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 family 182 650070628 172 46.15 5 171 3 170 1.0e-44 172 COG3688 Predicted RNA-binding protein containing a PIN domain 173 650070629 250 43.55 3 249 19 260 1.0e-65 243 COG0566 tRNA G18 (ribose-2'-O)-methylase SpoU 260 650070630 147 50.77 15 144 3 132 8.0e-41 159 COG1939 23S rRNA maturation mini-RNase III 132 650070631 468 51.27 3 468 2 464 0.0e+00 616 COG0215 Cysteinyl-tRNA synthetase 464 650070632 246 59.36 17 203 2 188 2.0e-71 262 COG1045 Serine acetyltransferase 194 650070633 487 42.62 1 485 6 471 0.0e+00 483 COG0008 Glutamyl- or glutaminyl-tRNA synthetase 472 650070634 162 66.03 2 157 1 156 2.0e-66 245 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 159 650070635 232 47.19 1 227 1 230 2.0e-68 252 COG1211 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 230 650070636 362 56.75 1 357 1 356 4.0e-108 384 COG4956 Uncharacterized conserved protein YacL, contains PIN and TRAM domains 356 650070638 245 39.53 5 214 11 222 4.0e-40 158 COG1183 Phosphatidylserine synthase 234 650070639 358 56.9 2 349 3 349 1.0e-122 433 COG1623 Diadenylate cyclase (c-di-AMP synthetase), DNA integrity scanning protein DisA 349 650070640 455 59.91 1 455 1 455 0.0e+00 650 COG1066 Predicted ATP-dependent serine protease 456 650070641 818 57.02 5 808 1 785 0.0e+00 986 COG0542 ATP-dependent Clp protease ATP-binding subunit ClpA 786 650070642 354 52.87 5 352 4 350 4.0e-111 395 COG3869 Protein-arginine kinase 352 650070643 174 48.82 1 168 1 168 1.0e-46 178 COG3880 Protein-arginine kinase activator protein McsA 176 650070644 153 54.67 1 150 1 150 3.0e-45 174 COG4463 Transcriptional regulator CtsR 153 650070645 238 33.48 3 228 1 228 8.0e-37 147 COG2188 DNA-binding transcriptional regulator, GntR family 236 650070646 338 26.43 4 329 1 306 5.0e-30 125 COG0524 Sugar or nucleoside kinase, ribokinase family 311 650070648 367 27.88 4 363 12 372 7.0e-58 217 COG1921 Seryl-tRNA(Sec) selenium transferase 395 650070649 367 36.83 15 366 20 372 5.0e-80 291 COG3964 Predicted amidohydrolase 386 650070651 233 31.82 1 233 1 242 8.0e-47 180 COG1131 ABC-type multidrug transport system, ATPase component 293 650070652 121 50.43 1 116 2 118 2.0e-28 118 COG1725 DNA-binding transcriptional regulator YhcF, GntR family 125 650070653 252 19.42 1 251 1 277 1.0e-04 40.9 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component 278 650070654 375 37.7 71 371 4 293 3.0e-69 255 COG1131 ABC-type multidrug transport system, ATPase component 293 650070655 102 31.25 1 95 15 110 5.0e-05 39.4 COG0640 DNA-binding transcriptional regulator, ArsR family 110 650070658 418 20.55 47 406 31 384 3.0e-11 63.3 COG2814 Predicted arabinose efflux permease, MFS family 394 650070661 670 45.51 1 669 5 667 0.0e+00 742 COG0272 NAD-dependent DNA ligase 667 650070662 776 48.46 11 646 1 644 0.0e+00 649 COG0210 Superfamily I DNA or RNA helicase 655 650070663 229 36.48 1 229 9 239 2.0e-57 215 COG1646 Heptaprenylglyceryl phosphate synthase 240 650070665 287 20.65 35 271 7 245 7.0e-10 58.3 COG0584 Glycerophosphoryl diester phosphodiesterase 257 650070667 466 46.29 240 466 1 226 1.0e-63 237 COG2148 Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid) 226 650070668 303 34.11 1 254 3 247 1.0e-48 187 COG1216 Glycosyltransferase, GT2 family 305 650070671 294 49.65 1 281 1 276 3.0e-91 328 COG1091 dTDP-4-dehydrorhamnose reductase 281 650070672 340 62.06 1 333 1 340 0.0e+00 535 COG1088 dTDP-D-glucose 4,6-dehydratase 340 650070673 182 55.11 1 176 1 173 3.0e-60 224 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme 173 650070674 247 50.21 1 237 1 239 1.0e-83 302 COG1209 dTDP-glucose pyrophosphorylase 286 650070675 121 27.38 38 118 18 101 8.0e-03 32.7 COG2076 Multidrug transporter EmrE and related cation transporters 106 650070676 129 28.97 6 112 11 117 5.0e-06 43.3 COG2456 Uncharacterized protein 121 650070677 233 21 1 214 3 210 3.0e-13 69 COG0463 Glycosyltransferase involved in cell wall bisynthesis 291 650070679 763 24.38 484 721 5 237 3.0e-17 84 COG1216 Glycosyltransferase, GT2 family 305 650070681 409 50.82 2 243 1 244 2.0e-83 303 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 249 650070682 494 30.08 229 494 3 263 3.0e-39 156 COG1682 ABC-type polysaccharide/polyol phosphate export permease 263 650070683 819 14.54 85 529 21 420 7.0e-07 50.2 COG3307 O-antigen ligase 424 650070684 290 57.44 1 288 2 290 4.0e-123 434 COG1210 UTP-glucose-1-phosphate uridylyltransferase 291 650070687 249 40.21 4 98 1 97 2.0e-15 76.7 COG0789 DNA-binding transcriptional regulator, MerR family 124 650070688 837 44.71 11 335 7 333 5.0e-90 326 COG0826 Collagenase-like protease, PrtC family 347 650070690 365 45.51 92 247 1 156 2.0e-47 182 COG4335 3-methyladenine DNA glycosylase AlkC 167 650070691 402 21.39 8 393 15 392 3.0e-20 93.3 COG2814 Predicted arabinose efflux permease, MFS family 394 650070692 651 28.74 3 608 11 682 3.0e-117 416 COG0480 Translation elongation factor EF-G, a GTPase 697 650070694 358 35.04 8 351 2 347 4.0e-44 172 COG0265 Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain 347 650070697 956 70.85 1 940 1 935 0.0e+00 1618 COG0178 Excinuclease UvrABC ATPase subunit 935 650070698 663 70.06 7 663 1 658 0.0e+00 1097 COG0556 Excinuclease UvrABC helicase subunit UvrB 663 650070699 264 41.53 1 247 1 248 6.0e-65 240 COG1291 Flagellar motor component MotA 266 650070700 270 33.08 6 267 3 243 5.0e-47 181 COG1360 Flagellar motor protein MotB 244 650070702 779 20.8 1 381 2 385 2.0e-16 81.6 COG1668 ABC-type Na+ efflux pump, permease component 407 650070703 312 38.06 1 308 1 293 3.0e-76 278 COG1131 ABC-type multidrug transport system, ATPase component 293 650070704 395 23.73 40 388 32 365 3.0e-30 126 COG4585 Signal transduction histidine kinase 365 650070705 216 45.28 2 213 1 206 1.0e-52 199 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650070707 489 41.15 20 410 3 400 2.0e-88 319 COG0793 C-terminal processing protease CtpA/Prc, contains a PDZ domain 406 650070708 422 23.61 1 422 11 418 3.0e-36 146 COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB 420 650070709 302 36.48 1 302 1 297 1.0e-62 233 COG2177 Cell division protein FtsX 297 650070710 228 62.33 1 223 1 223 2.0e-95 341 COG2884 ABC-type ATPase involved in cell division 223 650070711 478 28.52 144 430 92 371 2.0e-41 164 COG2720 Vancomycin resistance protein YoaR (function unknown), contains peptidoglycan-binding and VanW domains 376 650070713 242 24.58 27 141 8 120 7.0e-04 38 COG1664 Cytoskeletal protein CcmA, bactofilin family 146 650070714 257 27.63 43 254 55 309 2.0e-33 136 COG0627 S-formylglutathione hydrolase FrmB 316 650070715 471 59.65 1 451 2 452 0.0e+00 664 COG0165 Argininosuccinate lyase 459 650070716 410 55.75 1 407 2 399 0.0e+00 565 COG0137 Argininosuccinate synthase 403 650070717 318 55.84 11 317 3 309 9.0e-129 453 COG0078 Ornithine carbamoyltransferase 310 650070718 406 50.76 10 402 9 401 0.0e+00 483 COG4992 Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase 404 650070719 279 44.87 20 277 4 265 8.0e-67 247 COG0548 Acetylglutamate kinase 265 650070720 408 54.32 4 408 2 404 0.0e+00 509 COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 404 650070721 351 50.43 5 351 1 349 7.0e-127 446 COG0002 N-acetyl-gamma-glutamylphosphate reductase 349 650070722 189 31.52 9 187 1 184 4.0e-29 121 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650070723 301 44.84 24 300 9 289 3.0e-64 238 COG1284 Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains 289 650070724 339 63.18 96 334 1 239 6.0e-102 364 COG1186 Protein chain release factor B 239 650070725 837 58.39 1 830 1 822 0.0e+00 1080 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 822 650070726 188 39.09 1 110 1 110 8.0e-26 110 COG1544 Ribosome-associated translation inhibitor RaiA 110 650070727 65 65.15 1 65 2 67 6.0e-22 95.6 COG1278 Cold shock protein, CspA family 67 650070733 127 30.97 9 119 10 122 4.0e-16 76.9 COG1516 Flagellin-specific chaperone FliS 132 650070734 505 28.29 10 505 5 480 6.0e-47 182 COG1345 Flagellar capping protein FliD 483 650070737 78 53.33 1 60 1 60 4.0e-13 66.5 COG1551 sRNA-binding carbon storage regulator CsrA 73 650070738 153 41.43 3 141 2 141 4.0e-27 114 COG1699 Flagellar assembly factor FliW 146 650070740 286 23.63 1 286 12 358 1.0e-25 110 COG1344 Flagellin and related hook-associated protein FlgL 360 650070741 552 27.11 3 519 2 552 9.0e-70 258 COG1256 Flagellar hook-associated protein FlgK 552 650070743 98 26.37 1 91 4 93 4.0e-05 39.9 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) 93 650070745 290 27.41 37 290 23 223 1.0e-24 107 COG1040 Predicted amidophosphoribosyltransferases 225 650070746 633 42.38 207 624 41 440 9.0e-106 378 COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) 441 650070748 240 43.48 11 240 1 211 1.0e-58 219 COG2197 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 211 650070752 401 72.04 3 398 1 386 0.0e+00 686 COG0192 S-adenosylmethionine synthetase 388 650070758 374 37.58 1 315 1 311 3.0e-49 189 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 319 650070759 252 39.11 1 245 1 248 2.0e-67 248 COG1922 UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family 253 650070762 572 29.01 42 558 3 451 1.0e-88 320 COG1109 Phosphomannomutase 464 650070763 143 53.1 1 143 3 147 3.0e-43 167 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase 147 650070765 274 32.85 1 274 1 265 8.0e-54 203 COG4786 Flagellar basal body rod protein FlgG 265 650070766 281 27.78 1 279 13 265 2.0e-40 159 COG4786 Flagellar basal body rod protein FlgG 265 650070767 322 62.22 1 310 4 318 1.0e-116 413 COG1077 Actin-like ATPase involved in cell morphogenesis 342 650070770 360 35.34 19 353 69 394 1.0e-60 227 COG2385 Peptidoglycan hydrolase (amidase) enhancer domain 397 650070772 448 61.61 1 420 1 421 0.0e+00 612 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 421 650070773 84 31.58 9 84 1 76 1.0e-11 61.4 COG4836 Uncharacterized membrane protein YwzB 77 650070775 135 47.01 4 135 2 133 9.0e-29 119 COG0355 FoF1-type ATP synthase, epsilon subunit 135 650070776 466 75.05 1 466 1 465 0.0e+00 806 COG0055 FoF1-type ATP synthase, beta subunit 468 650070777 285 50.53 6 283 1 285 3.0e-90 325 COG0224 FoF1-type ATP synthase, gamma subunit 287 650070778 504 72.56 1 503 1 503 0.0e+00 852 COG0056 FoF1-type ATP synthase, alpha subunit 504 650070779 181 29.21 1 178 1 178 6.0e-30 123 COG0712 FoF1-type ATP synthase, delta subunit 178 650070780 162 34.16 1 161 2 161 5.0e-16 77.2 COG0711 FoF1-type ATP synthase, membrane subunit b or b' 161 650070781 70 48.57 1 70 8 77 2.0e-06 44 COG0636 FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 79 650070782 239 32.53 2 238 17 233 2.0e-29 122 COG0356 FoF1-type ATP synthase, membrane subunit a 246 650070785 385 54.81 1 378 1 382 0.0e+00 469 COG0381 UDP-N-acetylglucosamine 2-epimerase 383 650070786 209 63.81 1 209 1 210 4.0e-82 297 COG0035 Uracil phosphoribosyltransferase 210 650070787 416 64.08 1 411 3 412 0.0e+00 642 COG0112 Glycine/serine hydroxymethyltransferase 413 650070788 194 48.02 9 185 4 180 5.0e-54 204 COG4475 Uncharacterized protein YwlG, UPF0340 family 180 650070789 154 58.28 1 150 1 151 8.0e-53 199 COG0698 Ribose 5-phosphate isomerase RpiB 151 650070791 149 34.51 1 112 2 111 1.0e-21 95.7 COG0394 Protein-tyrosine-phosphatase 139 650070792 187 30.73 11 183 3 181 4.0e-18 84.5 COG1971 Putative Mn2+ efflux pump MntP 190 650070793 385 45.54 32 244 1 211 8.0e-62 231 COG0009 tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC 211 650070795 392 34.92 6 376 12 377 1.0e-64 240 COG0772 Bacterial cell division protein FtsW, lipid II flippase 381 650070796 382 33.16 6 373 12 371 1.0e-55 210 COG0772 Bacterial cell division protein FtsW, lipid II flippase 381 650070797 296 43.01 12 296 1 277 1.0e-56 213 COG2890 Methylase of polypeptide chain release factors 280 650070798 355 61.02 1 352 5 358 0.0e+00 517 COG0216 Protein chain release factor A 363 650070799 366 61.5 1 366 1 372 0.0e+00 513 COG0012 Ribosome-binding ATPase YchF, GTP1/OBG family 372 650070800 500 36.97 68 500 1 438 2.0e-84 306 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase or related enzyme 438 650070801 198 25.44 6 174 17 179 8.0e-11 60.4 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650070802 113 44.34 2 104 1 106 2.0e-19 87.8 COG2076 Multidrug transporter EmrE and related cation transporters 106 650070803 104 40.38 1 104 2 105 4.0e-17 79.7 COG2076 Multidrug transporter EmrE and related cation transporters 106 650070804 317 25.58 1 172 6 177 3.0e-13 69.7 COG1309 DNA-binding transcriptional regulator, AcrR family 201 650070805 1070 31.57 303 1063 245 1009 0.0e+00 539 COG0841 Multidrug efflux pump subunit AcrB 1009 650070807 334 44.01 4 334 1 322 2.0e-99 355 COG2896 Molybdenum cofactor biosynthesis enzyme MoaA 322 650070808 212 36.68 11 208 1 190 5.0e-37 147 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 192 650070811 620 31.89 75 594 6 472 2.0e-91 330 COG0008 Glutamyl- or glutaminyl-tRNA synthetase 472 650070812 84 30.49 1 82 1 82 6.0e-13 65.7 COG5460 Uncharacterized conserved protein, DUF2164 family 82 650070813 182 27.96 1 182 1 186 8.0e-23 100 COG1670 Protein N-acetyltransferase, RimJ/RimL family 187 650070814 219 43.41 5 209 3 205 2.0e-55 209 COG2258 Uncharacterized conserved protein YiiM, contains MOSC domain 210 650070815 164 25 7 164 1 164 3.0e-13 68.4 COG1247 L-amino acid N-acyltransferase YncA 169 650070816 721 36.41 13 400 1 368 1.0e-79 291 COG1472 Periplasmic beta-glucosidase and related glycosidases 397 650070817 253 27.57 21 251 39 309 6.0e-36 144 COG0627 S-formylglutathione hydrolase FrmB 316 650070818 333 40.24 2 330 1 333 3.0e-82 298 COG1609 DNA-binding transcriptional regulator, LacI/PurR family 333 650070819 272 45.85 2 272 5 281 9.0e-57 213 COG0395 ABC-type glycerol-3-phosphate transport system, permease component 281 650070820 299 39.52 6 295 4 289 3.0e-56 212 COG1175 ABC-type sugar transport system, permease component 295 650070821 414 28.84 9 414 7 433 1.0e-44 174 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650070822 421 22.35 38 391 40 380 8.0e-09 55.2 COG2807 Cyanate permease 395 650070823 555 25.14 188 551 79 407 1.0e-35 144 COG2972 Sensor histidine kinase YesM 456 650070824 524 23.66 1 521 1 473 4.0e-51 195 COG4753 Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains 475 650070825 558 19.47 71 406 36 349 9.0e-15 75.5 COG1653 ABC-type glycerol-3-phosphate transport system, periplasmic component 433 650070826 324 49.84 16 322 5 306 6.0e-87 314 COG4209 ABC-type polysaccharide transport system, permease component 309 650070827 695 33.88 14 689 42 762 0.0e+00 501 COG0243 Anaerobic selenocysteine-containing dehydrogenase 765 650070829 291 45.77 1 256 3 261 6.0e-60 224 COG2116 Formate/nitrite transporter FocA, FNT family 265 650070830 471 33.97 16 462 1 456 2.0e-43 170 COG0531 Amino acid transporter 466