##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0951.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 40249030 Filtered Sequences 0 Sequence length 151 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.11429184753024 34.0 33.0 34.0 31.0 34.0 2 33.31502225022566 34.0 34.0 34.0 31.0 34.0 3 33.263992771999725 34.0 34.0 34.0 31.0 34.0 4 36.56837730002437 37.0 37.0 37.0 35.0 37.0 5 36.60068110958202 37.0 37.0 37.0 35.0 37.0 6 36.606439981286506 37.0 37.0 37.0 36.0 37.0 7 36.61242420003662 37.0 37.0 37.0 37.0 37.0 8 36.614889427148924 37.0 37.0 37.0 37.0 37.0 9 38.56986218052957 39.0 39.0 39.0 39.0 39.0 10-14 38.91167505900142 39.4 39.4 39.4 39.0 39.4 15-19 40.26273191180012 41.0 41.0 41.0 39.0 41.0 20-24 40.25515818393636 41.0 41.0 41.0 39.0 41.0 25-29 40.21253159144457 41.0 41.0 41.0 39.0 41.0 30-34 40.14650904630496 41.0 41.0 41.0 39.0 41.0 35-39 40.06801215333637 41.0 40.2 41.0 39.0 41.0 40-44 39.924189536990085 41.0 40.0 41.0 38.4 41.0 45-49 39.625642794372936 41.0 40.0 41.0 37.4 41.0 50-54 39.23116650016162 41.0 39.0 41.0 36.0 41.0 55-59 38.64640695191909 40.0 37.6 41.0 35.0 41.0 60-64 37.76987715728801 38.8 36.0 41.0 35.0 41.0 65-69 36.755815377414066 36.8 35.0 39.4 34.6 41.0 70-74 35.793661914336816 35.6 35.0 37.8 34.0 39.8 75-79 35.079651733221894 35.0 35.0 36.4 34.0 38.2 80-84 34.61203141044641 35.0 35.0 35.4 34.0 36.6 85-89 34.41451415847786 35.0 35.0 35.0 34.0 36.0 90-94 34.313069562173304 35.0 35.0 35.0 34.0 36.0 95-99 34.243076034378966 35.0 35.0 35.0 34.0 35.2 100-104 33.84427941244795 34.8 34.4 35.0 33.0 35.0 105-109 34.16967386791681 35.0 35.0 35.0 34.0 35.0 110-114 34.15899410743564 35.0 35.0 35.0 34.0 35.0 115-119 34.19089078171574 35.0 35.0 35.0 34.0 35.0 120-124 34.161489516641765 35.0 35.0 35.0 34.0 35.0 125-129 34.12239459683873 35.0 35.0 35.0 34.0 35.0 130-134 34.084895084428126 35.0 35.0 35.0 34.0 35.0 135-139 34.03393376685103 35.0 35.0 35.0 34.0 35.0 140-144 33.974729010860635 35.0 35.0 35.0 33.6 35.0 145-149 33.88910867168725 35.0 35.0 35.0 33.0 35.0 150-151 33.56515247696653 35.0 34.5 35.0 32.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 11088.0 1 2015.0 2 87789.0 3 25391.0 4 21475.0 5 19228.0 6 19798.0 7 21030.0 8 22516.0 9 22572.0 10 22652.0 11 21992.0 12 20047.0 13 19606.0 14 18093.0 15 17525.0 16 17757.0 17 17040.0 18 17318.0 19 17390.0 20 19937.0 21 22008.0 22 25444.0 23 33189.0 24 41419.0 25 51281.0 26 64849.0 27 82297.0 28 97221.0 29 120025.0 30 155487.0 31 208437.0 32 295057.0 33 442950.0 34 774604.0 35 2051927.0 36 1.4546083E7 37 2.0297868E7 38 476625.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 17.57047271673229 31.966003930235487 23.359838913824383 27.103684439207843 2 23.404818540335743 31.053355323423563 26.505300361531948 19.036525774708746 3 21.184449713370096 29.651969237966526 26.944749793030464 22.218831255632914 4 21.208840864415656 27.537197537124193 28.270511088622087 22.983450509838065 5 22.982085890668692 27.848815239398412 28.162942370953175 21.006156498979717 6 22.320379452466202 28.317483456226245 27.28718800067632 22.07494909063123 7 23.403300133279288 28.05004663494965 27.788896882536328 20.75775634923474 8 21.438769664227124 28.02969366308186 28.98487957856369 21.546657094127326 9 21.351233581557977 27.17412286251175 29.66996389376153 21.80467966216874 10-14 22.138135078024458 28.068579901687148 27.97256555391574 21.82071946637266 15-19 22.083836447947768 27.96476145001774 27.89668865272126 22.054713449313233 20-24 22.182873227184466 27.784707976699032 27.889047611650486 22.14337118446602 25-29 22.276770239513112 27.76324450669916 27.796750807876553 22.163234445911172 30-34 22.297686143979032 27.69913279964193 27.755310667871274 22.247870388507767 35-39 22.351872947071552 27.723811114037417 27.71567442194479 22.208641516946237 40-44 22.440113027470417 27.682768354873083 27.666725912281148 22.21039270537535 45-49 22.418951432759386 27.642366456088286 27.658019221102325 22.280662890050003 50-54 22.428735347358483 27.66908020984062 27.640703753418943 22.261480689381955 55-59 22.406976296211973 27.664974432558896 27.618486006818816 22.309563264410315 60-64 22.411629129459232 27.63404734260706 27.595022503988844 22.359301023944866 65-69 22.449474653495123 27.62160746426722 27.605093713126337 22.32382416911131 70-74 22.43786643331309 27.614541363436444 27.5915467297327 22.356045473517767 75-79 22.38848452957333 27.606787300850467 27.600049534909697 22.40467863466651 80-84 22.44794105154555 27.640389620002182 27.575899993806495 22.33576933464578 85-89 22.41988613718896 27.629339802563784 27.58852206268145 22.36225199756581 90-94 22.398871928976963 27.586486703551078 27.589924538090322 22.424716829381637 95-99 22.428188724089804 27.585435973033167 27.617451214996624 22.3689240878804 100-104 22.43361838703096 27.621800974794024 27.58764910964244 22.356931528532574 105-109 22.394833074309354 27.59040591414753 27.62115673738647 22.393604274156647 110-114 22.415429381225096 27.64321570224533 27.608951594767372 22.3324033217622 115-119 22.47493391702816 27.60442341403738 27.584190800524926 22.336451868409526 120-124 22.461061597288563 27.564038818417114 27.59268474333707 22.382214840957253 125-129 22.45772447184324 27.630975928811637 27.601663659097113 22.30963594024801 130-134 22.47804589935084 27.632639886809713 27.560803755930834 22.328510457908614 135-139 22.448856997075904 27.617013536190644 27.51696010075218 22.41716936598127 140-144 22.45247525330802 27.664626879824578 27.558788625364123 22.324109241503283 145-149 22.50958178892705 27.70249415840903 27.481429159701232 22.306494892962686 150-151 22.416884870910494 27.67193135109555 27.457429310666793 22.453754467327162 >>END_MODULE >>Per base GC content pass #Base %GC 1 44.67415715594013 2 42.44134431504449 3 43.40328096900301 4 44.19229137425372 5 43.988242389648406 6 44.395328543097435 7 44.16105648251403 8 42.98542675835445 9 43.155913243726715 10-14 43.95885454439712 15-19 44.138549897261 20-24 44.326244411650485 25-29 44.44000468542429 30-34 44.5455565324868 35-39 44.56051446401779 40-44 44.65050573284577 45-49 44.69961432280938 50-54 44.69021603674044 55-59 44.71653956062229 60-64 44.770930153404095 65-69 44.773298822606435 70-74 44.79391190683086 75-79 44.793163164239836 80-84 44.78371038619132 85-89 44.78213813475477 90-94 44.8235887583586 95-99 44.79711281197021 100-104 44.79054991556353 105-109 44.788437348466 110-114 44.747832702987296 115-119 44.811385785437686 120-124 44.843276438245816 125-129 44.76736041209125 130-134 44.80655635725946 135-139 44.86602636305717 140-144 44.7765844948113 145-149 44.81607668188974 150-151 44.87063933823766 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2001.0 1 2017.5 2 1446.5 3 769.5 4 646.0 5 554.5 6 491.5 7 482.5 8 488.5 9 504.5 10 537.5 11 655.5 12 795.0 13 898.5 14 2205.0 15 3640.0 16 7247.0 17 15758.5 18 18592.0 19 30202.0 20 46867.5 21 53667.0 22 56898.0 23 58629.0 24 81739.0 25 118543.5 26 145642.0 27 173855.5 28 213775.0 29 247068.5 30 279114.5 31 318485.5 32 364229.5 33 440823.0 34 543148.0 35 668083.0 36 802606.5 37 961079.5 38 1107899.5 39 1246596.0 40 1426933.5 41 1646286.0 42 1863044.5 43 2061258.5 44 2238716.5 45 2352591.5 46 2447258.0 47 2479015.0 48 2394854.0 49 2289241.5 50 2163945.5 51 1901836.0 52 1569666.0 53 1337360.5 54 1127308.5 55 889726.0 56 684795.5 57 478025.5 58 306737.0 59 201332.5 60 144254.0 61 99023.0 62 56213.0 63 29270.0 64 12576.5 65 7035.5 66 4532.5 67 3389.5 68 2735.5 69 2248.0 70 1737.5 71 1361.0 72 1222.5 73 1104.5 74 960.5 75 835.0 76 701.0 77 552.5 78 417.5 79 308.5 80 230.5 81 149.0 82 100.0 83 87.5 84 70.5 85 52.0 86 39.5 87 30.0 88 29.5 89 26.0 90 20.0 91 13.0 92 6.5 93 9.5 94 8.0 95 4.5 96 4.5 97 4.5 98 3.5 99 3.5 100 24.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.022862662777214757 2 0.12651981923539524 3 0.06089836202263757 4 0.06694571272897756 5 0.06179030898384384 6 0.04893534080200193 7 0.04589675825727974 8 0.042935196202243876 9 0.031039257343593127 10-14 0.03530519865944596 15-19 0.035186438033413474 20-24 0.03641081536623367 25-29 0.03382193310000266 30-34 0.03470443883989254 35-39 0.03479885105305643 40-44 0.029852147989653414 45-49 0.03628658876996539 50-54 0.04245120938318265 55-59 0.04029910782943092 60-64 0.05296326395940473 65-69 0.05754275320423871 70-74 0.06177142654121106 75-79 0.054774984639381366 80-84 0.057207341394314354 85-89 0.05079128615025009 90-94 0.035777756631650504 95-99 0.04209542441147029 100-104 0.033424407991944155 105-109 0.0364232380258605 110-114 0.0418454804997785 115-119 0.042128220232885115 120-124 0.03735493749787262 125-129 0.04495909590864674 130-134 0.045466437327806405 135-139 0.04205865333897488 140-144 0.04195132155979908 145-149 0.036096770530867454 150-151 0.0347374831144999 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 4.024903E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 95.13730015724225 #Duplication Level Relative count 1 100.0 2 36.21539102074804 3 27.03490389285962 4 22.80202622996322 5 21.31704947609465 6 18.97855804593713 7 17.8960516272292 8 16.53597946013462 9 16.306987717715632 10++ 1110.7417944625633 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE