##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0952.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 51870140 Filtered Sequences 0 Sequence length 151 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.95979322592922 34.0 33.0 34.0 31.0 34.0 2 33.15329555694278 34.0 34.0 34.0 31.0 34.0 3 33.23164315731556 34.0 34.0 34.0 31.0 34.0 4 36.50683531989696 37.0 37.0 37.0 35.0 37.0 5 36.501296988980556 37.0 37.0 37.0 35.0 37.0 6 36.493711757863004 37.0 37.0 37.0 35.0 37.0 7 36.49008913413382 37.0 37.0 37.0 35.0 37.0 8 36.49402800917831 37.0 37.0 37.0 35.0 37.0 9 38.41661094417713 39.0 39.0 39.0 38.0 39.0 10-14 38.73524705350709 39.4 39.2 39.4 38.2 39.4 15-19 40.02893181703385 41.0 40.0 41.0 38.4 41.0 20-24 40.012860601494424 41.0 40.0 41.0 39.0 41.0 25-29 39.962411784506465 41.0 40.0 41.0 38.2 41.0 30-34 39.88721528031349 41.0 40.0 41.0 38.0 41.0 35-39 39.795238177494795 41.0 40.0 41.0 38.0 41.0 40-44 39.63761903476644 41.0 40.0 41.0 37.8 41.0 45-49 39.349146587998405 41.0 39.6 41.0 36.6 41.0 50-54 38.93370625566077 40.8 38.8 41.0 35.2 41.0 55-59 38.32282195498219 39.8 37.2 41.0 35.0 41.0 60-64 37.41827841220402 38.4 35.6 40.8 34.6 41.0 65-69 36.38902899818662 36.6 35.0 39.2 34.0 41.0 70-74 35.445650568901485 35.4 35.0 37.4 33.4 39.6 75-79 34.76810233402107 35.0 35.0 36.2 33.0 37.8 80-84 34.32648110068722 35.0 35.0 35.2 33.0 36.6 85-89 34.1432832454279 35.0 35.0 35.0 33.0 36.0 90-94 34.04761953601822 35.0 35.0 35.0 33.0 35.8 95-99 33.9719759730743 35.0 35.0 35.0 33.0 35.0 100-104 33.54464106323985 34.8 34.4 35.0 32.0 35.0 105-109 33.88562606540101 35.0 35.0 35.0 33.0 35.0 110-114 33.87695151777111 35.0 35.0 35.0 33.0 35.0 115-119 33.91367106778583 35.0 35.0 35.0 33.0 35.0 120-124 33.88012498520343 35.0 35.0 35.0 33.0 35.0 125-129 33.83493750739828 35.0 35.0 35.0 33.0 35.0 130-134 33.78727189477414 35.0 35.0 35.0 33.0 35.0 135-139 33.7257730324229 35.0 35.0 35.0 33.0 35.0 140-144 33.64955679703197 35.0 35.0 35.0 33.0 35.0 145-149 33.54100765103005 35.0 35.0 35.0 33.0 35.0 150-151 33.18145532285048 35.0 34.5 35.0 31.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 13713.0 1 2960.0 2 135292.0 3 39570.0 4 31360.0 5 32572.0 6 33974.0 7 36819.0 8 39665.0 9 39915.0 10 39045.0 11 39392.0 12 36553.0 13 33359.0 14 31115.0 15 30052.0 16 29544.0 17 28299.0 18 28530.0 19 29563.0 20 33119.0 21 39427.0 22 47285.0 23 60733.0 24 76935.0 25 96548.0 26 120889.0 27 153083.0 28 186115.0 29 233620.0 30 298994.0 31 398175.0 32 555625.0 33 827365.0 34 1417102.0 35 3409576.0 36 1.9193996E7 37 2.345112E7 38 539141.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 17.511375783952012 31.677149184922854 22.91820820401646 27.893266827108675 2 23.55948119806147 30.659568410659322 26.212737394029052 19.56821299725016 3 21.55328706832328 29.086700492009964 26.747297394242047 22.61271504542471 4 21.505294098322082 27.15420095718923 27.956638297480772 23.383866647007917 5 23.300607265172086 27.523923024793866 27.791372246218334 21.384097463815717 6 22.73145341112459 27.902516675238598 26.9913918417547 22.374638071882107 7 23.774135746536864 27.619489833215873 27.477281901500056 21.129092518747207 8 21.74616157705999 27.745274421123423 28.55720204927274 21.95136195254385 9 21.643177064165194 26.75251755308042 29.335854428360964 22.268450954393426 10-14 22.54189571903022 27.591525189864747 27.63869011304743 22.227888978057603 15-19 22.442712564633325 27.538652326383183 27.544113183960455 22.474521925023037 20-24 22.60200050715853 27.40519323221732 27.48873904292205 22.5040672177021 25-29 22.621795274211497 27.415374136609987 27.40976293176366 22.553067657414854 30-34 22.687441496806958 27.32237029033205 27.35480008182371 22.635388131037278 35-39 22.746848885979137 27.31872139001294 27.29509147487517 22.639338249132752 40-44 22.819855126962565 27.269408254280297 27.302085263660373 22.608651355096764 45-49 22.78489893304119 27.207724716258124 27.30877501232426 22.698601338376427 50-54 22.849772045467713 27.26880308540475 27.257058226223307 22.624366642904235 55-59 22.776402329088686 27.323513869805318 27.242958270266175 22.65712553083982 60-64 22.846532971152385 27.24606753478241 27.18157828938223 22.725821204682976 65-69 22.79299798923258 27.237407901135025 27.24677798234151 22.722816127290887 70-74 22.77126835244354 27.300299255507294 27.149439044314494 22.778993347734676 75-79 22.788015942407057 27.28245437551371 27.23250738348055 22.697022298598686 80-84 22.811078074584675 27.287154027657778 27.171335155268174 22.73043274248938 85-89 22.7840833737323 27.282719440113574 27.178661904489648 22.754535281664477 90-94 22.734960346092237 27.252954977442606 27.21282726365341 22.79925741281175 95-99 22.833983590145948 27.226600630480142 27.26646615663506 22.67294962273885 100-104 22.81255103305758 27.214369736483707 27.173799395853454 22.79927983460526 105-109 22.77869372898846 27.22104552943642 27.1990417947685 22.80121894680661 110-114 22.780326022545864 27.250329315469113 27.232793133660994 22.736551528324032 115-119 22.78858568757961 27.26277281967312 27.186862751129098 22.761778741618173 120-124 22.764840420242678 27.27882499359132 27.175101989209043 22.78123259695696 125-129 22.807012014857023 27.28124783983153 27.204016802407537 22.707723342903908 130-134 22.856533751479056 27.27066885616196 27.12204937765552 22.750748014703458 135-139 22.781417720175657 27.315492102591016 27.159578128534406 22.743512048698918 140-144 22.857580399769056 27.26964249456747 27.174123008096174 22.698654097567296 145-149 22.90887957993347 27.281334176565252 27.125830393675887 22.68395584982539 150-151 22.8392725107159 27.28637822484623 27.110399503518224 22.76394976091965 >>END_MODULE >>Per base GC content pass #Base %GC 1 45.40464261106069 2 43.127694195311626 3 44.16600211374799 4 44.889160745329995 5 44.6847047289878 6 45.1060914830067 7 44.90322826528407 8 43.697523529603835 9 43.911628018558616 10-14 44.76978469708782 15-19 44.91723448965636 20-24 45.10606772486063 25-29 45.17486293162635 30-34 45.32282962784424 35-39 45.38618713511189 40-44 45.42850648205933 45-49 45.48350027141762 50-54 45.474138688371944 55-59 45.43352785992851 60-64 45.57235417583536 65-69 45.515814116523465 70-74 45.55026170017821 75-79 45.485038241005746 80-84 45.541510817074055 85-89 45.53861865539678 90-94 45.534217758903985 95-99 45.506933212884796 100-104 45.61183086766284 105-109 45.57991267579508 110-114 45.51687755086989 115-119 45.550364429197785 120-124 45.54607301719963 125-129 45.514735357760934 130-134 45.60728176618252 135-139 45.52492976887458 140-144 45.556234497336355 145-149 45.59283542975886 150-151 45.603222271635545 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2378.0 1 2484.0 2 1817.5 3 976.5 4 824.5 5 668.5 6 610.0 7 587.5 8 564.0 9 594.0 10 606.0 11 835.0 12 1307.5 13 1951.0 14 3464.0 15 5665.5 16 6336.5 17 7374.0 18 9771.5 19 13696.5 20 22742.5 21 34369.0 22 50658.0 23 77780.0 24 95186.0 25 105884.5 26 123075.0 27 151097.0 28 199185.0 29 267050.0 30 335535.5 31 379751.0 32 426022.0 33 546608.0 34 706849.5 35 784543.5 36 876157.5 37 1004413.5 38 1150027.5 39 1349170.0 40 1539216.0 41 1794140.0 42 2131098.5 43 2439580.5 44 2751196.5 45 3135534.5 46 3520476.0 47 3666781.5 48 3522298.5 49 3247979.0 50 2959439.0 51 2578241.5 52 2130634.5 53 1747544.5 54 1442791.0 55 1189873.5 56 934251.5 57 730120.0 58 562777.5 59 393093.0 60 251959.0 61 160707.0 62 103644.0 63 63046.0 64 41807.5 65 38358.0 66 23503.0 67 11147.0 68 6018.5 69 1895.5 70 928.0 71 659.5 72 406.5 73 296.5 74 203.0 75 139.5 76 111.5 77 95.0 78 82.5 79 73.0 80 63.5 81 59.5 82 49.5 83 42.0 84 37.5 85 27.5 86 26.5 87 28.5 88 23.5 89 19.0 90 17.0 91 13.5 92 12.0 93 10.0 94 6.5 95 6.0 96 6.0 97 7.0 98 6.5 99 9.0 100 50.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02262573418926573 2 0.12444732171534528 3 0.05691713961057364 4 0.06231523570208216 5 0.05787337377535515 6 0.047339374831068516 7 0.04399641103725573 8 0.04107758336491862 9 0.029735797898366962 10-14 0.033974460065077906 15-19 0.033696458116365215 20-24 0.034911415315246885 25-29 0.032289868506235 30-34 0.03316166102501362 35-39 0.03320638810691469 40-44 0.02838126135769057 45-49 0.03458945744121763 50-54 0.040624914449816404 55-59 0.03853662241898711 60-64 0.05040819245909111 65-69 0.05502240788245415 70-74 0.059043989470628 75-79 0.05239661971222749 80-84 0.0546167795190065 85-89 0.048521557875108874 90-94 0.03411750961150288 95-99 0.040159135872777675 100-104 0.03180249754483022 105-109 0.0347660522990684 110-114 0.04003999218047224 115-119 0.04027673725191411 120-124 0.035812511784236556 125-129 0.043053672112702994 130-134 0.04375658133947585 135-139 0.04030604120212515 140-144 0.0401471829457179 145-149 0.03450270232546124 150-151 0.033313964450452614 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 5.187014E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 95.72490498858745 #Duplication Level Relative count 1 100.0 2 38.50270870047647 3 30.70295672606227 4 27.041315841002547 5 24.208602571633705 6 21.96984531035833 7 19.887735787481233 8 18.021016904901767 9 16.82005091051498 10++ 1008.2435872332093 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE