##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0953.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 50287074 Filtered Sequences 0 Sequence length 151 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.17662405651202 34.0 33.0 34.0 31.0 34.0 2 33.316623751065734 34.0 34.0 34.0 31.0 34.0 3 33.38843264175601 34.0 34.0 34.0 31.0 34.0 4 36.61981200178798 37.0 37.0 37.0 35.0 37.0 5 36.621718694549614 37.0 37.0 37.0 37.0 37.0 6 36.617453224659684 37.0 37.0 37.0 36.0 37.0 7 36.62021683743222 37.0 37.0 37.0 36.0 37.0 8 36.619366439972225 37.0 37.0 37.0 36.0 37.0 9 38.569673510930464 39.0 39.0 39.0 38.0 39.0 10-14 38.906730254379084 39.4 39.4 39.4 38.8 39.4 15-19 40.24998612963641 41.0 41.0 41.0 39.0 41.0 20-24 40.240887242713704 41.0 41.0 41.0 39.0 41.0 25-29 40.199648024858234 41.0 41.0 41.0 39.0 41.0 30-34 40.13461866164653 41.0 40.2 41.0 39.0 41.0 35-39 40.05905860420513 41.0 40.0 41.0 39.0 41.0 40-44 39.931820765710086 41.0 40.0 41.0 38.0 41.0 45-49 39.67975804279247 41.0 40.0 41.0 37.6 41.0 50-54 39.331211328780036 41.0 39.2 41.0 36.4 41.0 55-59 38.79219849617816 40.2 38.0 41.0 35.2 41.0 60-64 37.941487691250444 39.0 36.4 41.0 35.0 41.0 65-69 36.915049107848276 37.2 35.0 39.4 34.6 41.0 70-74 35.907417301710574 35.8 35.0 37.8 34.0 40.0 75-79 35.144630534677766 35.0 35.0 36.4 34.0 38.2 80-84 34.64217641296847 35.0 35.0 35.6 34.0 36.8 85-89 34.42662139777709 35.0 35.0 35.0 34.0 36.0 90-94 34.31882428076845 35.0 35.0 35.0 34.0 36.0 95-99 34.24865146458909 35.0 35.0 35.0 34.0 35.4 100-104 33.84397990227071 34.8 34.4 35.0 32.6 35.0 105-109 34.172718257578474 35.0 35.0 35.0 33.8 35.0 110-114 34.16454001678443 35.0 35.0 35.0 34.0 35.0 115-119 34.198749646877445 35.0 35.0 35.0 34.0 35.0 120-124 34.17000695645962 35.0 35.0 35.0 34.0 35.0 125-129 34.13149614948764 35.0 35.0 35.0 34.0 35.0 130-134 34.096554355101276 35.0 35.0 35.0 34.0 35.0 135-139 34.046779106694494 35.0 35.0 35.0 33.8 35.0 140-144 33.989376224196306 35.0 35.0 35.0 33.0 35.0 145-149 33.906264456746875 35.0 35.0 35.0 33.0 35.0 150-151 33.580341570479916 35.0 34.5 35.0 32.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 13564.0 1 2486.0 2 92825.0 3 26237.0 4 21646.0 5 21512.0 6 21945.0 7 24394.0 8 26251.0 9 26759.0 10 26855.0 11 26908.0 12 24717.0 13 22878.0 14 22112.0 15 21931.0 16 21163.0 17 20554.0 18 20315.0 19 21693.0 20 23983.0 21 27023.0 22 31737.0 23 39339.0 24 49713.0 25 61380.0 26 75972.0 27 100132.0 28 118720.0 29 151583.0 30 201818.0 31 278565.0 32 399261.0 33 614233.0 34 1076719.0 35 2649712.0 36 1.69958E7 37 2.6349257E7 38 535382.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 17.10411823413932 32.34815889879522 23.830079418686946 26.71764344837851 2 22.959510893442108 31.380823184580127 26.982501493270394 18.67716442870737 3 20.81685433857987 29.989904078799917 27.423958253743884 21.769283328876323 4 20.719532582360838 27.97747703343591 28.80987158813646 22.493118796066796 5 22.57969039963322 28.258591554833462 28.632882450783303 20.52883559475002 6 21.90944804148679 28.740975050208657 27.678824544899012 21.67075236340554 7 23.032686069507857 28.425897187249 28.219107365958795 20.322309377284352 8 21.15800958058954 28.48774208431785 29.27516883228187 21.079079502810735 9 20.939053752925084 27.575063365265663 30.022473710667846 21.463409171141407 10-14 21.724528568840295 28.4386679581426 28.375457479562556 21.461345993454554 15-19 21.6889318861008 28.337942144948595 28.309004247196974 21.66412172175363 20-24 21.80485711398617 28.141936314807335 28.29087667879977 21.762329892406726 25-29 21.90097544557071 28.1252256797047 28.184077854226626 21.78972102049796 30-34 21.9367137763513 28.09762903825068 28.108705247940375 21.85695193745764 35-39 22.023789167017746 28.058354267409246 28.07124946614148 21.84660709943153 40-44 22.023847275375775 28.070404674500153 28.047672065196906 21.858075984927165 45-49 22.03359445575453 28.034746709949122 28.012291570783574 21.919367263512783 50-54 22.046320693581738 28.0443797361369 28.004135366960604 21.905164203320762 55-59 22.042847367057178 28.04119188685791 27.999617084660695 21.91634366142422 60-64 22.01441596083965 27.999275205608935 28.002757835017857 21.98355099853356 65-69 22.025663687243156 28.03045317220736 27.9992787530573 21.944604387492184 70-74 22.048429910762128 28.03683410631679 27.98485673712246 21.929879245798624 75-79 21.968932752270085 27.999233836562297 28.019363653146982 22.012469758020632 80-84 22.032366047445585 28.002542836245325 27.995656485505833 21.96943463080326 85-89 22.035730757834024 28.01146733867727 27.98707594208288 21.96572596140583 90-94 21.981925702197618 28.0078513866986 27.98307450357353 22.02714840753025 95-99 21.996818995805047 27.999171963625447 28.003545860308716 22.000463180260795 100-104 22.030179645753826 28.034230934300414 28.000940716406316 21.934648703539448 105-109 22.007863414860363 27.984382326685104 27.99184614857361 22.01590810988092 110-114 21.983469457871998 28.058532874568364 27.993506656766208 21.964491010793427 115-119 22.003967213241683 28.05782824265539 27.981147471129447 21.95705707297348 120-124 22.01100622662608 27.99448467231138 27.996269880885567 21.99823922017697 125-129 22.004668026833265 28.039362481043188 28.010527262143714 21.945442229979832 130-134 22.053155369505916 28.061585958344708 27.95412231312587 21.931136359023505 135-139 22.006319201059867 28.02416679734387 27.988192038052397 21.981321963543866 140-144 22.06571053277108 28.0433882395916 27.95552632709346 21.935374900543856 145-149 22.084321358795222 28.095039856226478 27.91521275035128 21.905426034627013 150-151 22.073167926122206 28.022166886962353 27.92242635914211 21.982238827773333 >>END_MODULE >>Per base GC content pass #Base %GC 1 43.82176168251783 2 41.63667532214948 3 42.58613766745619 4 43.21265137842764 5 43.10852599438324 6 43.58020040489233 7 43.3549954467922 8 42.23708908340028 9 42.40246292406649 10-14 43.18587456229485 15-19 43.353053607854434 20-24 43.5671870063929 25-29 43.69069646606867 30-34 43.793665713808934 35-39 43.870396266449276 40-44 43.88192326030294 45-49 43.95296171926731 50-54 43.95148489690251 55-59 43.9591910284814 60-64 43.99796695937321 65-69 43.970268074735344 70-74 43.978309156560755 75-79 43.981402510290714 80-84 44.00180067824884 85-89 44.001456719239854 90-94 44.00907410972787 95-99 43.997282176065845 100-104 43.96482834929327 105-109 44.023771524741285 110-114 43.94796046866543 115-119 43.961024286215164 120-124 44.00924544680305 125-129 43.9501102568131 130-134 43.98429172852942 135-139 43.98764116460374 140-144 44.00108543331494 145-149 43.989747393422235 150-151 44.05540675389554 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2434.0 1 2534.0 2 1868.5 3 1009.0 4 817.5 5 663.0 6 587.5 7 596.0 8 615.0 9 620.5 10 627.5 11 631.5 12 684.5 13 915.0 14 1180.0 15 1449.5 16 2183.5 17 3753.5 18 6346.0 19 9253.5 20 15984.5 21 28484.5 22 46917.5 23 67615.5 24 80659.5 25 104619.0 26 137175.0 27 162442.0 28 204428.5 29 270762.5 30 368091.0 31 489294.5 32 588315.5 33 679783.5 34 803081.5 35 952376.0 36 1141333.5 37 1353671.0 38 1599418.0 39 1884835.0 40 2174816.0 41 2470941.5 42 2781748.0 43 3039420.5 44 3170969.0 45 3217547.0 46 3172850.0 47 3042623.0 48 2863617.0 49 2617190.5 50 2321878.0 51 1991527.5 52 1618509.0 53 1279258.0 54 1015793.5 55 795093.0 56 587348.0 57 400297.0 58 265188.0 59 173377.0 60 105271.0 61 61346.0 62 40139.5 63 25068.5 64 15862.5 65 10374.5 66 5525.5 67 2594.5 68 1376.0 69 742.0 70 443.5 71 260.5 72 190.0 73 159.0 74 137.0 75 107.5 76 86.5 77 76.5 78 60.5 79 51.5 80 46.0 81 42.0 82 35.0 83 25.0 84 20.5 85 21.0 86 22.0 87 18.5 88 13.0 89 9.5 90 11.0 91 9.5 92 6.5 93 6.5 94 5.0 95 4.0 96 2.5 97 3.5 98 4.0 99 6.0 100 31.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.022620126993270675 2 0.12610994228854916 3 0.05797513691092864 4 0.06375395792564904 5 0.058941588051036733 6 0.04838022590059624 7 0.04476498274685857 8 0.04188949231764807 9 0.030717635311213375 10-14 0.03492070347938717 15-19 0.03451105546526728 20-24 0.035983799733506065 25-29 0.03323716945630998 30-34 0.034143565402115064 35-39 0.03420600689552945 40-44 0.02942784064151356 45-49 0.03571056848525329 50-54 0.0420784076639655 55-59 0.03994664712446781 60-64 0.05209967078219743 65-69 0.05679272570124084 70-74 0.060823980333395415 75-79 0.05429148651599812 80-84 0.05614564092553884 85-89 0.04989234410417277 90-94 0.0350698471738483 95-99 0.0411302514837113 100-104 0.03271377451788108 105-109 0.035638581795393386 110-114 0.040924632043614226 115-119 0.041276213446023925 120-124 0.03666548584632305 125-129 0.0440530701786308 130-134 0.04463850889395553 135-139 0.04120263589008977 140-144 0.04115809164001071 145-149 0.03537529346010468 150-151 0.03407933418436714 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 5.0287074E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 95.24321819945109 #Duplication Level Relative count 1 100.0 2 37.44944283945522 3 29.896822121337184 4 26.264960792406107 5 23.326454808089146 6 22.87247214197276 7 22.50103177878663 8 21.57655798596781 9 19.463475030953365 10++ 1347.4948411060668 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE