##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0954.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 52782674 Filtered Sequences 0 Sequence length 151 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.997321109574706 34.0 33.0 34.0 31.0 34.0 2 33.13005004255753 34.0 34.0 34.0 31.0 34.0 3 33.248708487182746 34.0 34.0 34.0 31.0 34.0 4 36.528066274171714 37.0 37.0 37.0 35.0 37.0 5 36.510413796011925 37.0 37.0 37.0 35.0 37.0 6 36.5146797981474 37.0 37.0 37.0 35.0 37.0 7 36.5220123557969 37.0 37.0 37.0 35.0 37.0 8 36.5107259249503 37.0 37.0 37.0 35.0 37.0 9 38.44490731939803 39.0 39.0 39.0 38.0 39.0 10-14 38.7715381717872 39.4 39.2 39.4 38.2 39.4 15-19 40.06766197559449 41.0 40.0 41.0 39.0 41.0 20-24 40.0383149099267 41.0 40.0 41.0 39.0 41.0 25-29 39.9705120396136 41.0 40.0 41.0 38.6 41.0 30-34 39.869717885077215 41.0 40.0 41.0 38.0 41.0 35-39 39.73344929436504 41.0 40.0 41.0 38.0 41.0 40-44 39.4980727653169 41.0 40.0 41.0 37.2 41.0 45-49 39.07209199746113 41.0 39.0 41.0 35.6 41.0 50-54 38.47653177631736 40.2 37.4 41.0 35.0 41.0 55-59 37.71092287215309 39.2 36.0 41.0 35.0 41.0 60-64 36.761130006410816 37.2 35.0 40.2 34.0 41.0 65-69 35.80386260082238 35.6 35.0 38.4 33.6 40.8 70-74 34.98752805513415 35.0 35.0 36.6 33.0 39.0 75-79 34.43273742819472 35.0 35.0 35.8 33.0 37.0 80-84 34.08171285145576 35.0 35.0 35.0 33.0 36.2 85-89 33.95866326893556 35.0 35.0 35.0 33.0 36.0 90-94 33.884926034630226 35.0 35.0 35.0 33.0 35.4 95-99 33.80937010883533 35.0 35.0 35.0 33.0 35.0 100-104 33.35537052177387 34.8 34.4 35.0 31.6 35.0 105-109 33.700756880941654 35.0 35.0 35.0 33.0 35.0 110-114 33.6764473357299 35.0 35.0 35.0 33.0 35.0 115-119 33.71013543194117 35.0 35.0 35.0 33.0 35.0 120-124 33.662294191461385 35.0 35.0 35.0 33.0 35.0 125-129 33.59939094408139 35.0 35.0 35.0 33.0 35.0 130-134 33.53710994255425 35.0 35.0 35.0 33.0 35.0 135-139 33.45757288082829 35.0 35.0 35.0 32.6 35.0 140-144 33.365008142634075 35.0 35.0 35.0 32.0 35.0 145-149 33.236071749604804 35.0 35.0 35.0 32.0 35.0 150-151 32.848701536038135 35.0 34.5 35.0 30.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 14102.0 1 3186.0 2 130943.0 3 43554.0 4 40085.0 5 39886.0 6 39347.0 7 43170.0 8 48252.0 9 49758.0 10 49491.0 11 49156.0 12 45856.0 13 44028.0 14 41586.0 15 41911.0 16 43083.0 17 43297.0 18 45146.0 19 45918.0 20 49694.0 21 55194.0 22 66671.0 23 79468.0 24 95585.0 25 112386.0 26 138610.0 27 172690.0 28 205646.0 29 253875.0 30 326920.0 31 435644.0 32 601803.0 33 902149.0 34 1582370.0 35 4279325.0 36 2.2655848E7 37 1.9577802E7 38 289239.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 18.093876934027627 31.28661058549289 22.292096975126512 28.32741550535297 2 24.42066333601061 31.09086197442279 25.766720923514306 18.72175376605229 3 20.286699210975204 29.177343733605504 26.97991762637762 23.55603942904167 4 21.560126866283664 26.511174166026247 28.34622790212728 23.58247106556281 5 23.750250656008813 27.29470955352274 27.95661202779564 20.998427762672804 6 22.356853780571942 27.699493763917598 26.972655457383127 22.970996998127333 7 24.277715211473968 27.398582929922988 27.423397587159354 20.900304271443694 8 22.177293948240468 27.20171944846991 28.417125501455736 22.203861101833887 9 22.06153040165623 26.285695756665312 29.16668103814071 22.486092803537755 10-14 22.735307985178018 27.412440344753293 27.316056015706625 22.536195654362064 15-19 22.671347138010105 27.26443530638038 27.365613098435343 22.69860445717417 20-24 22.84411473056853 27.14322679520262 27.282111243447055 22.730547230781795 25-29 22.848221820843463 27.18355364683076 27.19813066915893 22.770093863166842 30-34 22.885479934406135 27.056914440742275 27.115490219707517 22.94211540514407 35-39 22.95417619551089 27.075053852295984 27.09113651903759 22.879633433155536 40-44 23.015772526792244 27.066011422751373 27.039662539630115 22.878553510826265 45-49 23.018600945514464 26.99457869647604 27.048634920111237 22.938185437898262 50-54 23.01521365090655 27.011341709928395 27.04682871509475 22.926615924070305 55-59 23.04697567212219 27.028381713547333 26.98072676566466 22.94391584866581 60-64 23.022577064942208 26.983617932843313 26.987402564315854 23.006402437898625 65-69 23.031719057072184 27.033814950306738 26.987080607526664 22.947385385094414 70-74 23.042065971655816 27.02644903282932 26.999649882930022 22.931835112584846 75-79 23.00587406142775 26.99970764923194 26.994068313086935 23.00034997625337 80-84 23.025466493653038 26.992192685694466 27.029703892955265 22.952636927697235 85-89 23.03418007260122 27.049877589166538 26.981002694351158 22.934939643881084 90-94 22.965997168692354 27.034146489013256 27.02872805391644 22.971128288377948 95-99 22.98366469568891 27.08518543094695 27.003747816360924 22.92740205700322 100-104 22.99257337557849 27.090523017659045 26.97936155260161 22.937542054160854 105-109 22.949109148258856 27.06296025288055 26.999894537962128 22.988036060898466 110-114 22.986293411234808 27.07040942090308 26.992730761778176 22.950566406083936 115-119 22.97702830479059 27.089956267783933 26.972277532327603 22.960737895097875 120-124 22.98483998470882 27.03050396082272 26.9734095488739 23.01124650559456 125-129 23.018066115525908 27.069883434141722 26.968707088586847 22.943343361745523 130-134 22.994635978260057 27.07265567276166 26.98842596339519 22.944282385583097 135-139 22.992304963053254 27.018193112591426 26.99381340777323 22.995688516582092 140-144 23.016926439753764 27.12099306821984 26.939157334226195 22.922923157800206 145-149 23.047236583873293 27.10530576555866 26.92602121435936 22.921436436208687 150-151 23.05050816476507 27.06482635309586 26.863902539830736 23.02076294230833 >>END_MODULE >>Per base GC content pass #Base %GC 1 46.42129243938059 2 43.14241710206289 3 43.842738640016876 4 45.142597931846474 5 44.74867841868162 6 45.32785077869927 7 45.17801948291766 8 44.381155050074355 9 44.547623205193986 10-14 45.271503639540086 15-19 45.369951595184276 20-24 45.57466196135033 25-29 45.618315684010305 30-34 45.82759533955021 35-39 45.83380962866642 40-44 45.89432603761851 45-49 45.95678638341273 50-54 45.94182957497685 55-59 45.990891520788004 60-64 46.02897950284083 65-69 45.979104442166594 70-74 45.97390108424066 75-79 46.00622403768112 80-84 45.97810342135027 85-89 45.969119716482304 90-94 45.9371254570703 95-99 45.91106675269213 100-104 45.930115429739345 105-109 45.93714520915732 110-114 45.93685981731874 115-119 45.937766199888465 120-124 45.99608649030338 125-129 45.96140947727143 130-134 45.93891836384316 135-139 45.98799347963534 140-144 45.939849597553966 145-149 45.96867302008198 150-151 46.0712711070734 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2362.0 1 2512.5 2 1910.0 3 1061.0 4 846.0 5 676.5 6 615.0 7 592.0 8 560.0 9 553.5 10 558.0 11 583.0 12 640.0 13 688.5 14 815.5 15 2300.0 16 4261.0 17 5803.0 18 7589.5 19 8043.0 20 8828.0 21 12449.5 22 23561.5 23 52242.5 24 76128.0 25 93473.5 26 124037.0 27 153455.5 28 178066.5 29 188947.5 30 223012.0 31 294530.0 32 369577.0 33 478716.0 34 602500.5 35 710318.5 36 851905.0 37 1058719.5 38 1248402.0 39 1411497.0 40 1668494.5 41 1944092.5 42 2205651.5 43 2579282.0 44 2920170.0 45 3084018.0 46 3165251.5 47 3149254.0 48 3091246.5 49 3103904.0 50 3044784.5 51 2832249.0 52 2516790.0 53 2167966.5 54 1865747.0 55 1515869.5 56 1147637.0 57 852988.5 58 605797.0 59 414550.0 60 270994.0 61 173729.5 62 111552.0 63 65998.0 64 32957.0 65 18213.0 66 10856.5 67 5815.0 68 3703.0 69 2573.0 70 1777.0 71 1369.5 72 1081.5 73 863.0 74 727.0 75 550.0 76 435.5 77 361.5 78 287.0 79 205.5 80 153.5 81 113.5 82 75.5 83 64.0 84 46.5 85 40.0 86 31.0 87 18.5 88 20.5 89 18.5 90 16.5 91 13.0 92 10.5 93 10.0 94 7.0 95 6.5 96 6.5 97 3.5 98 5.0 99 10.0 100 31.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.022554749689263565 2 0.12529300808064403 3 0.05796030720232173 4 0.06364209588926852 5 0.058913271426908 6 0.04788124224248282 7 0.04458470595862574 8 0.04174665345677637 9 0.03051758991975283 10-14 0.03464659634333797 15-19 0.034349529165574294 20-24 0.03563858852622738 25-29 0.03304038745744484 30-34 0.033839513322117785 35-39 0.03370954643184618 40-44 0.029085301741249413 45-49 0.035469593677652636 50-54 0.04159016271134729 55-59 0.039580033402627536 60-64 0.05154570228859569 65-69 0.0560888597648539 70-74 0.0601466306917304 75-79 0.05349785802818554 80-84 0.05564932159367296 85-89 0.04954390904863971 90-94 0.034787930600105633 95-99 0.040829685892760946 100-104 0.032371607395260044 105-109 0.03536046695929047 110-114 0.040665995815217695 115-119 0.0408656825533318 120-124 0.036359658474294045 125-129 0.043781033147354376 130-134 0.044294838112976236 135-139 0.040876671007611325 140-144 0.04080391986203655 145-149 0.03506264195709372 150-151 0.033908854257743745 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 5.2782674E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 95.90321234876929 #Duplication Level Relative count 1 100.0 2 33.206411051093596 3 26.97246081643496 4 22.961126361462853 5 21.163552643230318 6 19.631630213406535 7 18.533604887983707 8 17.869476666961834 9 17.187638360046048 10++ 1493.4826883910387 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE