##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0957.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 43612686 Filtered Sequences 0 Sequence length 151 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.074841457827205 34.0 33.0 34.0 31.0 34.0 2 33.21980994245573 34.0 34.0 34.0 31.0 34.0 3 33.30590519006328 34.0 34.0 34.0 31.0 34.0 4 36.55158129907431 37.0 37.0 37.0 35.0 37.0 5 36.56832067165045 37.0 37.0 37.0 35.0 37.0 6 36.555252960113485 37.0 37.0 37.0 35.0 37.0 7 36.530477416593875 37.0 37.0 37.0 35.0 37.0 8 36.54892282947214 37.0 37.0 37.0 35.0 37.0 9 38.49693946848401 39.0 39.0 39.0 38.0 39.0 10-14 38.821429613392766 39.4 39.4 39.4 38.2 39.4 15-19 40.13020022660379 41.0 41.0 41.0 39.0 41.0 20-24 40.08617795290114 41.0 40.2 41.0 39.0 41.0 25-29 40.00348212444425 41.0 40.0 41.0 39.0 41.0 30-34 39.8713344002706 41.0 40.0 41.0 38.0 41.0 35-39 39.65471754250587 41.0 40.0 41.0 37.6 41.0 40-44 39.26165784423367 41.0 39.4 41.0 36.2 41.0 45-49 38.59618882450854 40.4 37.8 41.0 35.0 41.0 50-54 37.773219379333796 39.2 35.8 41.0 35.0 41.0 55-59 36.87171009370989 37.6 35.0 40.6 34.0 41.0 60-64 35.95083035243461 35.6 35.0 39.2 33.4 41.0 65-69 35.16951730971122 35.0 35.0 37.2 33.0 40.2 70-74 34.56425457950469 35.0 35.0 36.0 33.0 38.4 75-79 34.175274208059555 35.0 35.0 35.0 33.0 36.8 80-84 33.913111139268054 35.0 35.0 35.0 33.0 36.0 85-89 33.831721682998385 35.0 35.0 35.0 33.0 36.0 90-94 33.75981664600984 35.0 35.0 35.0 33.0 35.2 95-99 33.667889783261685 35.0 35.0 35.0 33.0 35.0 100-104 33.16758482153564 34.8 33.8 35.0 31.6 35.0 105-109 33.516391171137684 35.0 35.0 35.0 32.4 35.0 110-114 33.4752930191 35.0 35.0 35.0 32.0 35.0 115-119 33.51767573774292 35.0 35.0 35.0 33.0 35.0 120-124 33.452795321984986 35.0 35.0 35.0 32.8 35.0 125-129 33.36977765597835 35.0 35.0 35.0 32.0 35.0 130-134 33.28386824420765 35.0 35.0 35.0 32.0 35.0 135-139 33.177938978580684 35.0 35.0 35.0 31.6 35.0 140-144 33.055759303611794 35.0 35.0 35.0 31.0 35.0 145-149 32.88758095752231 35.0 35.0 35.0 31.0 35.0 150-151 32.43709029982698 35.0 34.0 35.0 29.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 11734.0 1 2377.0 2 103654.0 3 36817.0 4 36293.0 5 35059.0 6 34681.0 7 37590.0 8 41412.0 9 44502.0 10 45648.0 11 45965.0 12 43008.0 13 42781.0 14 43906.0 15 44350.0 16 45700.0 17 46788.0 18 48156.0 19 49613.0 20 53087.0 21 58209.0 22 67655.0 23 79700.0 24 93027.0 25 108780.0 26 132873.0 27 163156.0 28 195365.0 29 243794.0 30 313715.0 31 412308.0 32 566543.0 33 856322.0 34 1534088.0 35 4656904.0 36 2.1233722E7 37 1.1542262E7 38 461142.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 19.133465529209083 29.700265399328035 21.31207151145241 29.85419756001047 2 26.392798569458858 29.505905119139715 24.92749759687463 19.173798714526797 3 21.85543889028366 27.676283470112146 25.79481496931112 24.673462670293077 4 22.692840501040067 25.616123346776433 26.82617647138452 24.864859680798983 5 24.73595969202702 26.340814426639287 26.78623127532776 22.13699460600593 6 23.465789884613468 26.244670761577815 26.013955505285175 24.27558384852354 7 25.33022649768702 26.298785064332193 26.297358240778863 22.073630197201926 8 22.880926649847012 26.205611135664338 27.351481545904978 23.561980668583676 9 23.248961628714802 25.198895492680766 27.849596085095413 23.702546793509015 10-14 23.916084544846296 26.215799506808736 26.086839004543588 23.78127694380138 15-19 23.87799147427478 26.07720556934802 26.111886682996882 23.932916273380318 20-24 24.04747738815646 25.933221131873797 26.037847635769978 23.98145384419977 25-29 24.059449047939417 25.93025100350298 25.997703211934343 24.012596736623255 30-34 24.1197695051285 25.837236925899106 25.91736873807165 24.125624830900747 35-39 24.19432043549819 25.854877134521548 25.850025064289245 24.10077736569102 40-44 24.244937070174434 25.861497003073946 25.78574661628647 24.10781931046515 45-49 24.23493935608729 25.776931800228752 25.812344568533916 24.17578427515004 50-54 24.239892223032182 25.798321666312756 25.789179253869587 24.172606856785475 55-59 24.26457343819129 25.815821311464184 25.757233624750047 24.162371625594478 60-64 24.237699604309146 25.77933220903147 25.78179285435206 24.20117533230733 65-69 24.253761460663807 25.809884033600483 25.75568858260735 24.180665923128362 70-74 24.290427898634864 25.814505056808752 25.74636866908001 24.14869837547638 75-79 24.24843723863234 25.795934511386974 25.742502493839037 24.213125756141647 80-84 24.26540340029621 25.803814819541692 25.786513877930627 24.144267902231466 85-89 24.267259127880983 25.81894846044317 25.750389628183036 24.16340278349281 90-94 24.270736096965003 25.778324189287087 25.760459438292283 24.190480275455624 95-99 24.213572130857035 25.810017499574595 25.776732491810883 24.199677877757484 100-104 24.251336366685877 25.843417768335584 25.748779462655076 24.156466402323467 105-109 24.21737076579752 25.78606889387857 25.774898945431907 24.221661394892006 110-114 24.246507502577224 25.78363816130737 25.779976731639692 24.189877604475715 115-119 24.280970600768054 25.837809749269603 25.73269337621833 24.148526273744018 120-124 24.203209089524545 25.817686673453117 25.771180589574623 24.207923647447714 125-129 24.256429989695015 25.804066877390873 25.76075874735406 24.178744385560044 130-134 24.275069948645395 25.84402514964978 25.70506997218103 24.1758349295238 135-139 24.279427805769192 25.789636438578377 25.713649598185956 24.21728615746648 140-144 24.300017849298655 25.821427527239127 25.719299278567103 24.15925534489511 145-149 24.313293608739556 25.857266037932096 25.692840920784143 24.136599432544205 150-151 24.31312225134245 25.77412317483691 25.650532607726444 24.26222196609419 >>END_MODULE >>Per base GC content pass #Base %GC 1 48.98766308921956 2 45.56659728398566 3 46.52890156057674 4 47.557700181839046 5 46.87295429803295 6 47.741373733137 7 47.403856694888944 8 46.442907318430684 9 46.95150842222382 10-14 47.69736148864768 15-19 47.810907747655094 20-24 48.02893123235623 25-29 48.072045784562675 30-34 48.24539433602924 35-39 48.29509780118921 40-44 48.35275638063958 45-49 48.41072363123733 50-54 48.41249907981766 55-59 48.42694506378577 60-64 48.43887493661647 65-69 48.43442738379217 70-74 48.43912627411124 75-79 48.461562994773985 80-84 48.40967130252768 85-89 48.4306619113738 90-94 48.46121637242063 95-99 48.41325000861452 100-104 48.40780276900934 105-109 48.43903216068952 110-114 48.436385107052935 115-119 48.42949687451207 120-124 48.41113273697226 125-129 48.43517437525506 130-134 48.45090487816919 135-139 48.49671396323566 140-144 48.45927319419377 145-149 48.449893041283765 150-151 48.575344217436644 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1930.0 1 2094.5 2 1574.5 3 807.0 4 691.0 5 600.0 6 523.0 7 498.0 8 490.0 9 498.5 10 497.5 11 501.5 12 949.5 13 2871.0 14 4354.0 15 3889.0 16 3686.5 17 4434.0 18 6207.0 19 10549.5 20 19334.0 21 31353.5 22 42774.5 23 64539.0 24 89767.0 25 109535.0 26 140528.0 27 178861.0 28 219638.0 29 244596.5 30 258554.5 31 308515.0 32 360495.5 33 414864.5 34 492750.0 35 574577.5 36 628030.0 37 647193.0 38 696518.0 39 777521.0 40 875770.0 41 983925.0 42 1065120.0 43 1136728.5 44 1276918.5 45 1422542.5 46 1562174.5 47 1750240.5 48 1951419.5 49 2146540.0 50 2333501.0 51 2488417.0 52 2562069.5 53 2535941.5 54 2435006.0 55 2222814.0 56 1903882.0 57 1557676.0 58 1253570.5 59 999418.0 60 770881.0 61 592319.5 62 436364.5 63 304885.5 64 212690.0 65 147488.5 66 103136.0 67 76707.5 68 55495.5 69 41005.0 70 28339.0 71 14704.5 72 8082.0 73 4404.5 74 1827.0 75 864.5 76 604.0 77 448.0 78 329.5 79 247.0 80 211.5 81 182.0 82 159.0 83 138.0 84 117.5 85 104.0 86 88.0 87 86.0 88 80.5 89 60.0 90 49.0 91 50.0 92 38.0 93 28.0 94 26.5 95 25.0 96 22.5 97 16.5 98 13.0 99 13.0 100 30.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02226874996875909 2 0.12332420892398144 3 0.05824681378257693 4 0.06417398827487947 5 0.05932906769374397 6 0.04782324115510794 7 0.0443655316253624 8 0.04139391919131053 9 0.030165534862952488 10-14 0.03438449078784095 15-19 0.034149238136811845 20-24 0.03556533986464397 25-29 0.03304084504219713 30-34 0.03386675152271062 35-39 0.03393737317623592 40-44 0.028992940265132945 45-49 0.03534888908241056 50-54 0.041422809867752694 55-59 0.03938624646966252 60-64 0.05157857051042442 65-69 0.05623547240360293 70-74 0.0602664096405344 75-79 0.05380406976080308 80-84 0.055733783514273806 85-89 0.04932463916576934 90-94 0.03462524642485904 95-99 0.040546459349006844 100-104 0.03224061916296556 105-109 0.03519526405688473 110-114 0.040568929875128536 115-119 0.04073310229046659 120-124 0.0362495444559411 125-129 0.04361941844168919 130-134 0.044033518137360304 135-139 0.04074273251594731 140-144 0.040574891443283266 145-149 0.03487654945168935 150-151 0.033702349816289695 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 4.3612686E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 94.90999379267535 #Duplication Level Relative count 1 100.0 2 42.957317073170735 3 34.3140243902439 4 31.21951219512195 5 29.817073170731707 6 26.966463414634145 7 26.615853658536587 8 26.653963414634145 9 24.375 10++ 1181.471036585366 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE