##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0958.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 58455140 Filtered Sequences 0 Sequence length 151 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.98485228159577 34.0 33.0 34.0 31.0 34.0 2 33.137123442010406 34.0 34.0 34.0 31.0 34.0 3 33.2126906376411 34.0 34.0 34.0 31.0 34.0 4 36.492306835634984 37.0 37.0 37.0 35.0 37.0 5 36.48455771382979 37.0 37.0 37.0 35.0 37.0 6 36.47682176451891 37.0 37.0 37.0 35.0 37.0 7 36.48090296251108 37.0 37.0 37.0 35.0 37.0 8 36.43048878165376 37.0 37.0 37.0 35.0 37.0 9 38.36680900943869 39.0 39.0 39.0 37.0 39.0 10-14 38.69995768721108 39.4 39.2 39.4 38.0 39.4 15-19 39.97406350237122 41.0 40.0 41.0 38.2 41.0 20-24 39.93297484190441 41.0 40.0 41.0 38.4 41.0 25-29 39.84607794284643 41.0 40.0 41.0 38.0 41.0 30-34 39.709469466671365 41.0 40.0 41.0 38.0 41.0 35-39 39.50135066651111 41.0 40.0 41.0 37.4 41.0 40-44 39.139226863540145 41.0 39.2 41.0 35.8 41.0 45-49 38.53171403233317 40.4 37.8 41.0 35.0 41.0 50-54 37.77450783284413 39.4 36.2 41.0 34.6 41.0 55-59 36.91683346922101 38.0 35.0 40.8 34.0 41.0 60-64 36.00215412707932 36.0 35.0 39.4 33.0 41.0 65-69 35.20561750429474 35.0 35.0 37.6 33.0 40.6 70-74 34.5678196647891 35.0 35.0 36.2 32.8 39.0 75-79 34.13892136773601 35.0 35.0 35.2 32.2 37.2 80-84 33.834965503461284 35.0 35.0 35.0 32.0 36.2 85-89 33.716302155807 35.0 35.0 35.0 32.6 36.0 90-94 33.619656040512425 35.0 35.0 35.0 32.6 36.0 95-99 33.512561485611016 35.0 35.0 35.0 32.0 35.0 100-104 33.00214647676834 34.8 33.8 35.0 30.8 35.0 105-109 33.35316163471681 35.0 35.0 35.0 31.8 35.0 110-114 33.314143960650846 35.0 35.0 35.0 31.8 35.0 115-119 33.354991821078514 35.0 35.0 35.0 32.0 35.0 120-124 33.290520652247174 35.0 35.0 35.0 32.0 35.0 125-129 33.20705444893297 35.0 35.0 35.0 31.4 35.0 130-134 33.122118249994784 35.0 35.0 35.0 31.0 35.0 135-139 33.01429275509391 35.0 35.0 35.0 31.0 35.0 140-144 32.88624902104418 35.0 35.0 35.0 31.0 35.0 145-149 32.71379954269206 35.0 35.0 35.0 30.4 35.0 150-151 32.26364000667863 35.0 34.0 35.0 28.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 15419.0 1 3541.0 2 168635.0 3 57836.0 4 56349.0 5 56450.0 6 57647.0 7 62269.0 8 69129.0 9 72237.0 10 71881.0 11 70904.0 12 68596.0 13 65837.0 14 64747.0 15 62737.0 16 65591.0 17 67139.0 18 69065.0 19 73477.0 20 76199.0 21 82859.0 22 97048.0 23 116730.0 24 140208.0 25 164941.0 26 200188.0 27 244420.0 28 293381.0 29 363521.0 30 463020.0 31 612235.0 32 854918.0 33 1280265.0 34 2233137.0 35 6192702.0 36 2.6329686E7 37 1.6419372E7 38 990824.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 18.826728210362923 30.158701178782536 22.138133767193622 28.87643684366092 2 25.865190742794724 29.93748031834586 25.211233553802114 18.986095385057297 3 21.501463355050756 28.162570235633506 26.258743465978995 24.07722294333674 4 22.171467619533683 26.069172784062523 27.538773700959375 24.22058589544442 5 24.299951457866996 26.810864708116526 27.285615293146027 21.60356854087045 6 23.011432880062458 26.904984096967294 26.500270805537152 23.5833122174331 7 24.807797335463576 26.76179664482049 26.900739917768735 21.529666101947196 8 22.599204255444263 26.728974467354956 27.759471573752386 22.912349703448395 9 22.693257576970986 25.755450267655235 28.469524485015402 23.08176767035838 10-14 23.33952551787563 26.808358859078623 26.72169595278214 23.130419670263606 15-19 23.268646756474418 26.682748767809468 26.746977803671445 23.30162667204467 20-24 23.402885782640062 26.54719648058128 26.659160697976986 23.390757038801674 25-29 23.451505782316232 26.5383202313776 26.579392312741778 23.430781673564397 30-34 23.553705100234055 26.448318658204006 26.479268506300617 23.51870773526132 35-39 23.60110489794921 26.463959664181225 26.430891581469467 23.50404385640009 40-44 23.624753807729014 26.454719214310725 26.419473658263353 23.501053319696908 45-49 23.64599526147674 26.375055308035893 26.413776623244413 23.565172807242952 50-54 23.608240249237575 26.434906209800435 26.375632646929077 23.58122089403291 55-59 23.62908176754421 26.423641196579666 26.37861975491956 23.568657280956565 60-64 23.63553181693251 26.392164040756818 26.377305512204295 23.594998630106378 65-69 23.656876641061388 26.4315950594916 26.376537032312942 23.53499126713407 70-74 23.669692497311022 26.402038219372532 26.350684177824146 23.5775851054923 75-79 23.619431352697642 26.408721708610717 26.37007288863739 23.60177405005425 80-84 23.62123360105451 26.45185002673161 26.36284108689771 23.564075285316168 85-89 23.647845690477602 26.43830578222623 26.383963994532404 23.529884532763763 90-94 23.591950198934846 26.438334913393906 26.38094735333356 23.58876753433768 95-99 23.629708344746636 26.4293081408084 26.3882592660729 23.552724248372062 100-104 23.644614483631372 26.485301309652037 26.33614176173485 23.533942444981744 105-109 23.62707383660861 26.395189577447464 26.388921061452553 23.588815524491373 110-114 23.594811164966178 26.4618178432235 26.379782160872896 23.56358883093743 115-119 23.654586576429992 26.457264002333197 26.354676887674856 23.533472533561948 120-124 23.644549746017272 26.4267013512102 26.376385721843555 23.55236318092898 125-129 23.593854712814007 26.404540975716838 26.422577585180377 23.579026726288774 130-134 23.669437942050813 26.439808763080023 26.362802351006554 23.527950943862606 135-139 23.649372961511332 26.441528197527518 26.3273069945951 23.581791846366045 140-144 23.685411819361075 26.435107197429215 26.32678086188668 23.55270012132303 145-149 23.72986520826033 26.42816256233902 26.314085595356723 23.527886634043927 150-151 23.72228712431963 26.37484925998974 26.274473427532424 23.628390188158203 >>END_MODULE >>Per base GC content pass #Base %GC 1 47.70316505402384 2 44.85128612785203 3 45.578686298387495 4 46.3920535149781 5 45.903519998737444 6 46.594745097495554 7 46.337463437410776 8 45.51155395889266 9 45.77502524732937 10-14 46.469945188139235 15-19 46.57027342851909 20-24 46.793642821441736 25-29 46.88228745588063 30-34 47.07241283549538 35-39 47.1051487543493 40-44 47.12580712742592 45-49 47.211168068719694 50-54 47.18946114327049 55-59 47.19773904850078 60-64 47.23053044703889 65-69 47.19186790819546 70-74 47.24727760280332 75-79 47.22120540275189 80-84 47.18530888637068 85-89 47.17773022324137 90-94 47.18071773327252 95-99 47.1824325931187 100-104 47.17855692861311 105-109 47.21588936109998 110-114 47.15839999590361 115-119 47.18805910999194 120-124 47.196912926946254 125-129 47.17288143910278 130-134 47.19738888591342 135-139 47.23116480787738 140-144 47.23811194068411 145-149 47.25775184230426 150-151 47.350677312477835 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2524.0 1 2742.5 2 2088.0 3 1098.0 4 874.0 5 709.0 6 649.0 7 619.0 8 622.0 9 629.5 10 626.5 11 661.5 12 675.0 13 699.0 14 752.5 15 1048.5 16 3301.5 17 5369.5 18 4353.0 19 4959.5 20 9894.5 21 40996.0 22 74212.5 23 94394.0 24 118059.5 25 145266.5 26 189713.5 27 230545.5 28 268572.5 29 345528.5 30 450318.0 31 554684.5 32 673623.5 33 734486.5 34 779095.5 35 891276.0 36 1023179.0 37 1125223.0 38 1175681.5 39 1274067.0 40 1433394.0 41 1589416.5 42 1755133.5 43 1961114.5 44 2155941.5 45 2304389.5 46 2443640.0 47 2638663.5 48 2876507.0 49 2996087.5 50 2946427.0 51 2868337.0 52 2853675.5 53 2802010.0 54 2641109.5 55 2408221.5 56 2119732.5 57 1779590.5 58 1452037.0 59 1169686.0 60 928274.0 61 702625.5 62 492149.5 63 339702.5 64 224100.0 65 134984.0 66 80600.5 67 48374.5 68 28927.5 69 18242.5 70 10861.0 71 5623.5 72 3501.0 73 2439.0 74 1560.5 75 1099.0 76 908.0 77 759.0 78 535.0 79 344.0 80 290.0 81 250.5 82 201.0 83 171.0 84 142.0 85 121.5 86 100.0 87 84.0 88 67.5 89 56.0 90 51.0 91 41.5 92 35.0 93 31.5 94 28.0 95 23.0 96 19.0 97 17.5 98 12.0 99 10.0 100 56.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.022201640437436297 2 0.12441164284269955 3 0.05684358980236811 4 0.06219299106973314 5 0.05769723586326198 6 0.04722424751698482 7 0.04368991332498733 8 0.04075946101574643 9 0.029554287270546268 10-14 0.03380096258429968 15-19 0.03348721771943408 20-24 0.03489752996913531 25-29 0.03224934539546052 30-34 0.03303730005607719 35-39 0.03307835718125044 40-44 0.028341391364386435 45-49 0.03445616587352284 50-54 0.040533304684583764 55-59 0.03855537767936233 60-64 0.05035553759686488 65-69 0.0548307642407494 70-74 0.058885497494317866 75-79 0.05232696389060055 80-84 0.054392137286815155 85-89 0.0483796634479021 90-94 0.033919343961882564 95-99 0.03991299995175788 100-104 0.031680362069101194 105-109 0.03465358221706423 110-114 0.03977340572616882 115-119 0.04009091416084197 120-124 0.03560302823669569 125-129 0.04292111865611818 130-134 0.043555109097335155 135-139 0.04008509773477576 140-144 0.03997184849783954 145-149 0.034267303097725875 150-151 0.03295005366508403 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 5.845514E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 95.49749510633356 #Duplication Level Relative count 1 100.0 2 34.20529069339032 3 26.02608503426424 4 23.65337852774298 5 22.024906049664725 6 21.24382875248692 7 19.821678579323557 8 18.576376096087245 9 18.01635841131825 10++ 1190.1628472478078 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE