##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0960.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 41097372 Filtered Sequences 0 Sequence length 151 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.01235334463722 34.0 33.0 34.0 31.0 34.0 2 33.28258332430599 34.0 34.0 34.0 31.0 34.0 3 33.197076445666646 34.0 34.0 34.0 31.0 34.0 4 36.555370766773116 37.0 37.0 37.0 35.0 37.0 5 36.60083158115317 37.0 37.0 37.0 35.0 37.0 6 36.6059111273587 37.0 37.0 37.0 36.0 37.0 7 36.61504718598552 37.0 37.0 37.0 37.0 37.0 8 36.62460967090548 37.0 37.0 37.0 37.0 37.0 9 38.58821201511376 39.0 39.0 39.0 39.0 39.0 10-14 38.92702539228056 39.4 39.4 39.4 39.0 39.4 15-19 40.29166486849816 41.0 41.0 41.0 39.0 41.0 20-24 40.272827123836535 41.0 41.0 41.0 39.0 41.0 25-29 40.21930492781874 41.0 41.0 41.0 39.0 41.0 30-34 40.13692917396276 41.0 40.6 41.0 39.0 41.0 35-39 40.043925660258765 41.0 40.0 41.0 39.0 41.0 40-44 39.8619844938017 41.0 40.0 41.0 38.2 41.0 45-49 39.498784321294316 41.0 39.6 41.0 37.2 41.0 50-54 39.169587520097394 40.8 39.0 41.0 36.0 41.0 55-59 38.60064441590085 40.0 37.4 41.0 35.0 41.0 60-64 37.791355666245515 38.8 36.0 41.0 35.0 41.0 65-69 36.78367048384505 36.8 35.0 39.4 34.8 41.0 70-74 35.82796191445039 35.6 35.0 37.8 34.0 39.8 75-79 35.06608022040923 35.0 35.0 36.4 34.0 38.2 80-84 34.61391351252338 35.0 35.0 35.4 34.0 36.6 85-89 34.4079095860436 35.0 35.0 35.0 34.0 36.0 90-94 34.28130795808549 35.0 35.0 35.0 34.0 36.0 95-99 34.21259237695296 35.0 35.0 35.0 34.0 35.0 100-104 33.79394572966855 34.8 34.4 35.0 32.6 35.0 105-109 34.12626648730727 35.0 35.0 35.0 33.8 35.0 110-114 34.115109705798226 35.0 35.0 35.0 34.0 35.0 115-119 34.07006748266044 35.0 35.0 35.0 33.0 35.0 120-124 34.01441769561323 35.0 35.0 35.0 33.0 35.0 125-129 34.010109872718864 35.0 35.0 35.0 33.0 35.0 130-134 34.00432878287206 35.0 35.0 35.0 33.0 35.0 135-139 33.94183603759384 35.0 35.0 35.0 33.0 35.0 140-144 33.86931851506223 35.0 35.0 35.0 33.0 35.0 145-149 33.76852829908443 35.0 35.0 35.0 33.0 35.0 150-151 32.911441381215326 34.5 33.5 35.0 30.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 417.0 1 914.0 2 105679.0 3 24480.0 4 21874.0 5 20024.0 6 20407.0 7 21994.0 8 24042.0 9 23425.0 10 22955.0 11 21698.0 12 20073.0 13 19653.0 14 17952.0 15 17659.0 16 17834.0 17 18051.0 18 18758.0 19 19344.0 20 22330.0 21 24111.0 22 28018.0 23 34979.0 24 43199.0 25 53009.0 26 66902.0 27 80467.0 28 98551.0 29 124892.0 30 160414.0 31 214715.0 32 303633.0 33 459648.0 34 828766.0 35 2315986.0 36 1.5927709E7 37 1.945953E7 38 393280.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 17.703349445314643 31.385181064065364 23.222289344323556 27.689180146296437 2 23.70179461153219 30.7859533579322 26.348956611694934 19.163295418840676 3 21.503365407498475 29.42026377210442 26.8697573525182 22.206613467878903 4 21.592447462418825 27.33290346640496 28.117961753328558 22.95668731784766 5 23.20844759849938 27.675676183404914 28.06504242225086 21.050833795844852 6 22.519879843189337 28.229270256312695 27.107872718192798 22.14297718230517 7 23.62326091754782 27.874232925045977 27.628216531415852 20.87428962599035 8 21.636747689087404 27.947606701207906 28.81379330248604 21.60185230721865 9 21.54601588576828 27.086265481725256 29.499303000692436 21.868415631814024 10-14 22.242625472673698 27.95828567012204 27.923830911302428 21.875257945901833 15-19 22.199574944787475 27.83614774945469 27.87188236772812 22.092394938029713 20-24 22.259831451097316 27.706867589278357 27.854038348090764 22.179262611533563 25-29 22.380104071044745 27.666814072889018 27.735169567560835 22.2179122885054 30-34 22.37640102039588 27.605605747064754 27.711402742188106 22.30659049035126 35-39 22.436931487136185 27.640336233933084 27.658557583648125 22.264174695282602 40-44 22.500413999629554 27.59917683728636 27.639338463559348 22.261070699524733 45-49 22.497363429749186 27.56256852107773 27.603874686947204 22.336193362225877 50-54 22.497755330588845 27.582498989724158 27.59977086283434 22.319974816852657 55-59 22.48588842778796 27.58415335361243 27.560383267210398 22.369574951389215 60-64 22.486672611062744 27.549590470374646 27.538216709705253 22.425520208857357 65-69 22.518505985179047 27.550096736191264 27.555161052916294 22.3762362257134 70-74 22.50500206268317 27.537868169371755 27.543313376371326 22.41381639157375 75-79 22.46355974304361 27.53628759507591 27.544460240498804 22.455692421381677 80-84 22.513864687571004 27.566632929226564 27.52805429233493 22.391448090867495 85-89 22.48602546383468 27.56045138103393 27.535612293677115 22.417910861454278 90-94 22.47341097634427 27.515484751001846 27.529713834317516 22.48139043833637 95-99 22.49936235109646 27.526895555246213 27.553626046472544 22.42011604718478 100-104 22.50856706926635 27.537698801213562 27.53489398315814 22.41884014636196 105-109 22.463420601679847 27.51652371489476 27.5631612398248 22.45689444360059 110-114 22.47367911846013 27.578263683674713 27.5513949465058 22.39666225135936 115-119 22.538815097094854 27.525246075516467 27.528317024921062 22.407621802467617 120-124 22.52289682737423 27.486651958115694 27.52597910359464 22.464472110915437 125-129 22.50308814588056 27.54835012842388 27.55350028282534 22.395061442870215 130-134 22.529808446915272 27.557774253376117 27.495073933954277 22.417343365754334 135-139 22.494595192416153 27.528876949331842 27.484177748927458 22.492350109324548 140-144 22.49196236600259 27.57841677027337 27.523756581197382 22.405864282526654 145-149 22.528631489941628 27.605547928728136 27.466141220846364 22.39967936048387 150-151 22.43229078687974 27.557822231176175 27.436900066583014 22.572986915361067 >>END_MODULE >>Per base GC content pass #Base %GC 1 45.39252959161108 2 42.86509003037287 3 43.70997887537738 4 44.549134780266485 5 44.25928139434423 6 44.6628570254945 7 44.497550543538175 8 43.23859999630606 9 43.4144315175823 10-14 44.11788341857553 15-19 44.29196988281719 20-24 44.43909406263088 25-29 44.598016359550144 30-34 44.68299151074714 35-39 44.70110618241879 40-44 44.761484699154295 45-49 44.83355679197506 50-54 44.8177301474415 55-59 44.85546337917717 60-64 44.9121928199201 65-69 44.894742210892446 70-74 44.91881845425692 75-79 44.91925216442529 80-84 44.9053127784385 85-89 44.90393632528895 90-94 44.95480141468064 95-99 44.91947839828124 100-104 44.92740721562831 105-109 44.92031504528043 110-114 44.870341369819485 115-119 44.94643689956248 120-124 44.98736893828967 125-129 44.89814958875078 130-134 44.9471518126696 135-139 44.9869453017407 140-144 44.89782664852925 145-149 44.9283108504255 150-151 45.00527770224081 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5.0 1 6.5 2 13.0 3 22.0 4 35.0 5 47.0 6 60.0 7 76.5 8 111.5 9 159.0 10 189.5 11 279.0 12 411.5 13 509.5 14 1665.0 15 2968.5 16 6185.0 17 13960.0 18 16792.5 19 27537.0 20 42759.5 21 49284.5 22 52908.0 23 55196.5 24 76840.5 25 111614.0 26 138308.0 27 166126.5 28 206154.5 29 240079.0 30 271820.0 31 310579.5 32 357352.5 33 433854.5 34 536100.0 35 663119.5 36 799615.0 37 959769.0 38 1109679.0 39 1252788.0 40 1436710.5 41 1661663.5 42 1887105.5 43 2096964.5 44 2285948.0 45 2412172.0 46 2516016.5 47 2552013.0 48 2472832.5 49 2371978.5 50 2243827.0 51 1971372.5 52 1631480.5 53 1394908.5 54 1178274.0 55 929966.5 56 716639.5 57 503050.0 58 323338.5 59 211916.5 60 152153.0 61 105282.5 62 60528.0 63 31418.5 64 13638.0 65 7544.5 66 4694.0 67 3540.0 68 2847.0 69 2317.5 70 1852.5 71 1518.5 72 1350.0 73 1137.0 74 951.5 75 835.5 76 697.5 77 558.0 78 405.5 79 259.5 80 184.0 81 138.0 82 99.5 83 70.0 84 42.0 85 32.5 86 23.5 87 12.5 88 10.5 89 9.5 90 10.0 91 10.0 92 7.0 93 7.0 94 6.5 95 4.0 96 3.0 97 3.0 98 2.0 99 1.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015619003570349949 2 0.006803354725455438 3 0.005353140341917727 4 0.0022702181540951087 5 0.0070564122688915485 6 0.00909547209004021 7 0.011149131384848647 8 0.007564960601373733 9 0.008168405512644458 10-14 0.008477427705109708 15-19 0.009458025685924638 20-24 0.011100953121771387 25-29 0.008941690967490572 30-34 0.010084343105929011 35-39 0.006621834602952228 40-44 0.004683024500934025 45-49 0.007944546916527899 50-54 0.012481090031742177 55-59 0.021300632069612628 60-64 0.03672692258765353 65-69 0.052903626051806915 70-74 0.055275553872398464 75-79 0.06378850696341362 80-84 0.050495199547065925 85-89 0.02754774684863061 90-94 0.016746569586006618 95-99 0.01028094935121399 100-104 0.009240006879271989 105-109 0.010419644350981859 110-114 0.00855675151199449 115-119 0.0062991862350711865 120-124 0.0050937563598957136 125-129 0.008415136617494667 130-134 0.010802150560867979 135-139 0.007602919232889149 140-144 0.005792584499076972 145-149 0.0036537616079198444 150-151 0.0378941505067526 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 4.1097372E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 94.76139217796914 #Duplication Level Relative count 1 100.0 2 33.52287412768157 3 25.452313259240114 4 21.271646420263632 5 18.79038511243215 6 17.342982682863788 7 16.11527526492634 8 15.074954768674075 9 15.02326182476092 10++ 1029.7299043680537 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE