##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0961.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 45212200 Filtered Sequences 0 Sequence length 151 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.989604575756104 34.0 33.0 34.0 31.0 34.0 2 33.230582187993505 34.0 34.0 34.0 31.0 34.0 3 33.2779053662507 34.0 34.0 34.0 31.0 34.0 4 36.590550448772674 37.0 37.0 37.0 35.0 37.0 5 36.57212177244195 37.0 37.0 37.0 35.0 37.0 6 36.56883805698462 37.0 37.0 37.0 35.0 37.0 7 36.56727263880103 37.0 37.0 37.0 35.0 37.0 8 36.5745044479145 37.0 37.0 37.0 36.0 37.0 9 38.52421518970544 39.0 39.0 39.0 38.0 39.0 10-14 38.848301237276665 39.4 39.4 39.4 38.2 39.4 15-19 40.179977289315715 41.0 41.0 41.0 39.0 41.0 20-24 40.15563343964682 41.0 40.8 41.0 39.0 41.0 25-29 40.09850938463512 41.0 40.2 41.0 39.0 41.0 30-34 40.0127689252016 41.0 40.0 41.0 38.6 41.0 35-39 39.91027521332738 41.0 40.0 41.0 38.0 41.0 40-44 39.726307014478394 41.0 40.0 41.0 37.8 41.0 45-49 39.392495627286436 41.0 39.4 41.0 36.8 41.0 50-54 39.041976369210076 40.8 38.8 41.0 35.4 41.0 55-59 38.44372919256307 39.8 37.2 41.0 35.0 41.0 60-64 37.601425265746855 38.6 35.6 40.8 35.0 41.0 65-69 36.57390138944798 36.6 35.0 39.2 34.2 41.0 70-74 35.62984379437408 35.4 35.0 37.4 34.0 39.6 75-79 34.8979032163885 35.0 35.0 36.2 33.8 37.8 80-84 34.47030620496238 35.0 35.0 35.2 33.4 36.6 85-89 34.27354448578039 35.0 35.0 35.0 33.4 36.0 90-94 34.15028123382626 35.0 35.0 35.0 33.0 35.8 95-99 34.075403369002174 35.0 35.0 35.0 33.0 35.0 100-104 33.64185875936141 34.8 34.4 35.0 32.2 35.0 105-109 33.97874707269277 35.0 35.0 35.0 33.0 35.0 110-114 33.96605896196159 35.0 35.0 35.0 33.0 35.0 115-119 33.91513746289718 35.0 35.0 35.0 33.0 35.0 120-124 33.856904194000734 35.0 35.0 35.0 33.0 35.0 125-129 33.85013691879625 35.0 35.0 35.0 33.0 35.0 130-134 33.840441814377535 35.0 35.0 35.0 33.0 35.0 135-139 33.771061589570955 35.0 35.0 35.0 33.0 35.0 140-144 33.687216967986515 35.0 35.0 35.0 33.0 35.0 145-149 33.569005219830046 35.0 35.0 35.0 33.0 35.0 150-151 32.69386551638717 34.5 33.5 35.0 29.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 440.0 1 1068.0 2 106113.0 3 27733.0 4 22736.0 5 23145.0 6 23845.0 7 26178.0 8 29159.0 9 29538.0 10 28171.0 11 29027.0 12 27496.0 13 25569.0 14 23880.0 15 23483.0 16 23560.0 17 23260.0 18 23645.0 19 25065.0 20 28346.0 21 33365.0 22 38948.0 23 47260.0 24 59746.0 25 73799.0 26 92488.0 27 114416.0 28 142553.0 29 180003.0 30 232077.0 31 311465.0 32 436083.0 33 653253.0 34 1144203.0 35 2989439.0 36 1.7801405E7 37 1.9881014E7 38 409226.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 17.860512908998803 31.500797479919214 22.8766859344894 27.762003676592585 2 23.60373977177013 30.622864629218533 26.091638825829396 19.681756773181945 3 21.690919994046407 28.99508917040829 26.713285451102465 22.600705384442836 4 21.737625707922685 27.069199652333566 27.806024495903138 23.387150143840618 5 23.39650615569936 27.51253633181607 27.658522756907818 21.432434755576754 6 22.843225534905127 27.84811579774326 26.87794454298605 22.43071412436557 7 23.80958901173347 27.621887317480176 27.37216906923695 21.19635460154941 8 21.825934628071177 27.715996740999003 28.495147840872026 21.96292079005779 9 21.764697476887072 26.73693090516825 29.182965712910253 22.315405905034428 10-14 22.60019966080959 27.567181579158635 27.573001727282463 22.25961703274931 15-19 22.507293665354354 27.483790655373607 27.50451884654177 22.504396832730265 20-24 22.63809653990925 27.35967970162519 27.462567185963486 22.539656572502075 25-29 22.67287420237506 27.375476234684275 27.356836285602387 22.59481327733828 30-34 22.730248949644746 27.281874426333957 27.303873773763776 22.68400285025752 35-39 22.786070950729144 27.27784041701376 27.24238047846064 22.693708153796454 40-44 22.851234941830484 27.23254872676773 27.260811348706138 22.65540498269565 45-49 22.828693892439514 27.16255740638383 27.270042207793843 22.738706493382807 50-54 22.89015318135456 27.218110736218353 27.21900218869944 22.672733893727646 55-59 22.81648297399099 27.280827537571987 27.20185708475321 22.70083240368381 60-64 22.89034358042599 27.202080561413716 27.1434874203876 22.76408843777269 65-69 22.83299125764614 27.187861679785957 27.2123143618214 22.766832700746505 70-74 22.819418263626776 27.259106965200168 27.111265949251102 22.81020882192196 75-79 22.839046277870796 27.220257336815557 27.198338887963452 22.74235749735019 80-84 22.842432686227912 27.247461281797104 27.14277857381349 22.767327458161493 85-89 22.833187135528252 27.232826101543807 27.1268481979617 22.80713856496624 90-94 22.771289242446176 27.20617615694182 27.18003463099601 22.842499969615996 95-99 22.882500519049458 27.17779858350485 27.21695081702787 22.72275008041783 100-104 22.84592377711752 27.177655437974146 27.135071415776927 22.841349369131407 105-109 22.826284249829744 27.17052955076517 27.15680349928752 22.846382700117566 110-114 22.81335531068783 27.196804537426967 27.210077305846553 22.77976284603865 115-119 22.834715440880863 27.206835886719787 27.140765093074986 22.817683579324363 120-124 22.81189681706071 27.233042279822634 27.136589855550476 22.818471047566184 125-129 22.845411148422297 27.227417843200275 27.165758022242343 22.761412986135092 130-134 22.88415075455197 27.21337361718406 27.09661538949411 22.80586023876986 135-139 22.80932045930064 27.249945279399075 27.13468971646387 22.806044544836414 140-144 22.871868423597153 27.19770366904804 27.164190028046796 22.766237879308008 145-149 22.921589047705808 27.195820833994073 27.129178040495283 22.753412077804832 150-151 22.852264309430836 27.184642544718663 27.09998041952574 22.863112726324765 >>END_MODULE >>Per base GC content pass #Base %GC 1 45.622516585591384 2 43.285496544952075 3 44.29162537848924 4 45.124775851763296 5 44.82894091127611 6 45.273939659270695 7 45.00594361328288 8 43.78885541812897 9 44.0801033819215 10-14 44.8598166935589 15-19 45.01169049808462 20-24 45.177753112411324 25-29 45.26768747971334 30-34 45.41425179990227 35-39 45.479779104525605 40-44 45.506639924526134 45-49 45.567400385822324 50-54 45.56288707508221 55-59 45.5173153776748 60-64 45.65443201819868 65-69 45.59982395839264 70-74 45.629627085548734 75-79 45.58140377522099 80-84 45.609760144389405 85-89 45.64032570049449 90-94 45.61378921206217 95-99 45.60525059946728 100-104 45.68727314624893 105-109 45.67266694994731 110-114 45.59311815672648 115-119 45.65239902020522 120-124 45.63036786462689 125-129 45.606824134557385 130-134 45.69001099332183 135-139 45.615365004137054 140-144 45.63810630290516 145-149 45.67500112551065 150-151 45.7153770357556 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 14.0 1 18.0 2 24.5 3 29.0 4 41.5 5 58.5 6 76.5 7 97.0 8 108.5 9 134.0 10 173.5 11 375.5 12 744.0 13 1243.5 14 2491.5 15 4330.5 16 4817.5 17 5547.5 18 7534.0 19 10793.0 20 18073.5 21 27626.5 22 41152.5 23 63293.0 24 78025.5 25 87099.0 26 100852.5 27 124683.5 28 165512.0 29 222017.5 30 280013.5 31 319455.5 32 358936.5 33 461198.0 34 599566.0 35 668805.0 36 748240.0 37 859364.5 38 988971.5 39 1164984.5 40 1333058.0 41 1560014.0 42 1856475.0 43 2124717.0 44 2397273.0 45 2736580.5 46 3072722.0 47 3201523.0 48 3081633.5 49 2851362.0 50 2608567.0 51 2278659.5 52 1886294.5 53 1546368.0 54 1275035.5 55 1051983.5 56 826825.0 57 646471.0 58 498742.5 59 347739.0 60 222185.0 61 140340.5 62 89461.0 63 54099.5 64 35747.5 65 32778.0 66 19955.5 67 9482.0 68 5153.5 69 1641.5 70 799.0 71 581.5 72 351.0 73 252.0 74 175.5 75 108.0 76 64.5 77 57.0 78 52.0 79 42.0 80 41.5 81 38.0 82 30.0 83 21.5 84 17.5 85 18.0 86 18.5 87 16.5 88 14.0 89 10.5 90 10.0 91 9.5 92 7.0 93 9.0 94 6.0 95 5.0 96 7.0 97 3.5 98 4.0 99 6.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016146084463927877 2 0.0069251219803504365 3 0.005589199375389829 4 0.0023179584271501943 5 0.007082159240205077 6 0.008838322399706274 7 0.010729404895138923 8 0.007197172444605659 9 0.007789932805747121 10-14 0.008246889114000204 15-19 0.009296605783394748 20-24 0.010953238285241595 25-29 0.008674649762674676 30-34 0.009942891520430326 35-39 0.006351825392261381 40-44 0.0043289200702465265 45-49 0.007085698108032787 50-54 0.011234135919066093 55-59 0.01982694936322497 60-64 0.03491004640340439 65-69 0.0506124453134331 70-74 0.05262517639044329 75-79 0.0606765430569625 80-84 0.048078615948792584 85-89 0.02659237993284998 90-94 0.01657472982955928 95-99 0.010090196893758764 100-104 0.009210345880094312 105-109 0.01047150990219454 110-114 0.00850876533325076 115-119 0.006224426150463813 120-124 0.005189307310858573 125-129 0.00847116486258134 130-134 0.010917849606964493 135-139 0.0076293566780647705 140-144 0.005638743524977771 145-149 0.003561428110111872 150-151 0.036860626114190415 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 4.52122E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 95.14848796221376 #Duplication Level Relative count 1 100.0 2 37.3730378578024 3 29.010849492151433 4 25.3808864265928 5 23.020544783010155 6 20.290858725761773 7 19.067405355494 8 16.874422899353647 9 16.441597414589104 10++ 866.7416897506926 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE