##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0962.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 52559064 Filtered Sequences 0 Sequence length 151 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.16930307206384 34.0 33.0 34.0 31.0 34.0 2 33.34009264320232 34.0 34.0 34.0 31.0 34.0 3 33.43056042626635 34.0 34.0 34.0 31.0 34.0 4 36.656806064887306 37.0 37.0 37.0 37.0 37.0 5 36.646114835682766 37.0 37.0 37.0 37.0 37.0 6 36.63612641579766 37.0 37.0 37.0 36.0 37.0 7 36.63749519968621 37.0 37.0 37.0 37.0 37.0 8 36.646290257375966 37.0 37.0 37.0 37.0 37.0 9 38.60521597188261 39.0 39.0 39.0 39.0 39.0 10-14 38.94173983768052 39.4 39.4 39.4 39.0 39.4 15-19 40.30625856655286 41.0 41.0 41.0 39.0 41.0 20-24 40.287770607939294 41.0 41.0 41.0 39.0 41.0 25-29 40.23769842628857 41.0 41.0 41.0 39.0 41.0 30-34 40.15942104296226 41.0 40.2 41.0 39.0 41.0 35-39 40.07083647456127 41.0 40.0 41.0 39.0 41.0 40-44 39.915690252779235 41.0 40.0 41.0 38.2 41.0 45-49 39.619833606625875 41.0 40.0 41.0 37.4 41.0 50-54 39.333781735534714 41.0 39.0 41.0 36.4 41.0 55-59 38.80846184018802 40.2 38.0 41.0 35.2 41.0 60-64 38.02301507119685 39.0 36.4 41.0 35.0 41.0 65-69 37.000767011376 37.2 35.2 39.6 35.0 41.0 70-74 35.993337746653935 35.8 35.0 38.0 34.0 40.0 75-79 35.17716943361093 35.0 35.0 36.4 34.0 38.2 80-84 34.684248326796684 35.0 35.0 35.6 34.0 36.8 85-89 34.456628519868616 35.0 35.0 35.0 34.0 36.0 90-94 34.32299969801593 35.0 35.0 35.0 34.0 36.0 95-99 34.2537500477558 35.0 35.0 35.0 34.0 35.2 100-104 33.837029388499005 34.8 34.4 35.0 32.6 35.0 105-109 34.166615840038546 35.0 35.0 35.0 33.8 35.0 110-114 34.15736113565493 35.0 35.0 35.0 34.0 35.0 115-119 34.11579821132279 35.0 35.0 35.0 33.0 35.0 120-124 34.062985512831816 35.0 35.0 35.0 33.0 35.0 125-129 34.05900931949625 35.0 35.0 35.0 33.0 35.0 130-134 34.056187720542354 35.0 35.0 35.0 33.0 35.0 135-139 33.995741811536064 35.0 35.0 35.0 33.0 35.0 140-144 33.92799061261822 35.0 35.0 35.0 33.0 35.0 145-149 33.831804067134826 35.0 35.0 35.0 33.0 35.0 150-151 32.99165601579206 34.5 34.0 35.0 31.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 563.0 1 1148.0 2 111392.0 3 25960.0 4 22086.0 5 21774.0 6 22102.0 7 25284.0 8 27396.0 9 27736.0 10 26612.0 11 26603.0 12 24358.0 13 22671.0 14 22090.0 15 22168.0 16 21738.0 17 22076.0 18 21971.0 19 23544.0 20 25851.0 21 28602.0 22 33573.0 23 40594.0 24 50326.0 25 61205.0 26 75666.0 27 94337.0 28 117612.0 29 153606.0 30 202642.0 31 280131.0 32 402667.0 33 623375.0 34 1108785.0 35 2857112.0 36 1.8808589E7 37 2.6591446E7 38 483673.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 17.508487653865814 32.162870928879954 23.89336051417429 26.43528090307994 2 23.032798275239706 31.25250675586105 26.893684173012073 18.821010795887172 3 20.951142984560256 29.874902623246307 27.41566367326026 21.758290718933175 4 20.965282557561547 27.894615221791213 28.712161593291206 22.427940627356033 5 22.709524597355415 28.180098522804865 28.571733284216855 20.53864359562286 6 22.009412620649186 28.70604979421963 27.581811379853306 21.702726205277877 7 23.1035319412733 28.438968585382124 28.115027215112903 20.34247225823167 8 21.279711334346466 28.51402361814044 29.157280661649516 21.048984385863577 9 21.07145971574135 27.58734711672748 29.875783378682435 21.465409788848735 10-14 21.793542161593972 28.432476116554824 28.32183137170812 21.452150350143075 15-19 21.762147454697093 28.30519603306864 28.272597277639345 21.66005923459492 20-24 21.847966934370373 28.12535159525661 28.253881996004456 21.772799474368565 25-29 21.969644490244114 28.088606872118362 28.1378582403985 21.803890397239027 30-34 21.98624629391937 28.06063534659269 28.070068720960133 21.883049638527808 35-39 22.069537413393157 28.020803277137507 28.028625070904745 21.881034238564588 40-44 22.059626883889305 28.030198929425538 28.0329255017854 21.877248684899754 45-49 22.082372708867076 27.99526080259754 27.97753550592543 21.944830982609954 50-54 22.08051063544313 28.013102368851893 27.981481375838698 21.92490561986628 55-59 22.085470670750592 27.997934338723113 27.963945484287457 21.952649506238842 60-64 22.05485157414828 27.96789341855118 27.96713247965582 22.01012252764472 65-69 22.070720443564028 27.999017790230102 27.959274896890207 21.970986869315663 70-74 22.083306231882798 28.005407457053145 27.952686601120526 21.958599709943538 75-79 22.016469236604095 27.969031085700653 27.97007055735602 22.044429120339228 80-84 22.065394480402688 27.97871547537223 27.962799152825397 21.99309089139968 85-89 22.073443457608732 27.972172543582168 27.957448385276457 21.996935613532635 90-94 22.023824457318707 27.97511408552204 27.94902065981547 22.052040797343782 95-99 22.040607041991493 27.962861785480815 27.970726110189005 22.025805062338694 100-104 22.07390962339152 27.987936406084334 27.963327917250936 21.974826053273215 105-109 22.051636225612025 27.936236531549714 27.960569032847083 22.051558209991175 110-114 22.028818640289753 28.012091398568856 27.95541127905684 22.003678682084544 115-119 22.03797967098896 28.00980785199667 27.949946487891342 22.00226598912303 120-124 22.041450281509213 27.947986582480727 27.963013497775968 22.04754963823409 125-129 22.02726509645852 27.99882642478823 27.984707399828512 21.989201078924733 130-134 22.08070636589437 28.00610657270215 27.930582925789 21.982604135614487 135-139 22.019419961220418 27.97606629807914 27.978013969009492 22.026499771690954 140-144 22.083059701693603 27.97314885313085 27.944330481049334 21.999460964126214 145-149 22.08618273428642 28.03692076334523 27.930653982733794 21.946242519634556 150-151 22.079059045542753 27.95994256017284 27.913046418491565 22.04795197579284 >>END_MODULE >>Per base GC content pass #Base %GC 1 43.94376855694575 2 41.85380907112688 3 42.70943370349343 4 43.39322318491758 5 43.24816819297828 6 43.71213882592706 7 43.44600419950497 8 42.32869572021004 9 42.536869504590086 10-14 43.24569251173705 15-19 43.42220668929201 20-24 43.62076640873894 25-29 43.77353488748314 30-34 43.86929593244718 35-39 43.950571651957745 40-44 43.93687556878906 45-49 44.02720369147703 50-54 44.00541625530941 55-59 44.03812017698943 60-64 44.064974101793 65-69 44.041707312879694 70-74 44.041905941826336 75-79 44.060898356943326 80-84 44.05848537180238 85-89 44.07037907114137 90-94 44.07586525466249 95-99 44.06641210433018 100-104 44.048735676664734 105-109 44.10319443560321 110-114 44.0324973223743 115-119 44.040245660111985 120-124 44.0889999197433 125-129 44.01646617538326 130-134 44.06331050150885 135-139 44.04591973291137 140-144 44.082520665819814 145-149 44.03242525392098 150-151 44.12701102133559 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 6.0 1 8.0 2 14.0 3 26.5 4 52.5 5 83.0 6 106.5 7 135.0 8 152.5 9 173.0 10 185.5 11 198.0 12 258.5 13 479.5 14 713.0 15 997.0 16 1758.0 17 3224.5 18 5891.5 19 8772.5 20 15408.0 21 27941.5 22 46044.5 23 66343.0 24 79429.0 25 103428.0 26 136076.5 27 162097.0 28 204929.0 29 272399.5 30 372200.5 31 498227.0 32 602373.0 33 695428.0 34 822116.0 35 979429.5 36 1178212.5 37 1402350.5 38 1662940.0 39 1965911.0 40 2268189.5 41 2569981.0 42 2893354.5 43 3172327.5 44 3317095.5 45 3369930.0 46 3331438.5 47 3204101.5 48 3019441.5 49 2761411.0 50 2454931.0 51 2107574.5 52 1710324.0 53 1351299.5 54 1074577.5 55 841066.5 56 622262.0 57 424439.0 58 280298.5 59 183341.5 60 111814.0 61 65316.5 62 42598.0 63 26526.0 64 16602.5 65 10748.0 66 5521.0 67 2429.0 68 1250.0 69 658.5 70 386.0 71 280.5 72 218.5 73 148.5 74 113.0 75 90.5 76 71.5 77 54.0 78 44.5 79 35.5 80 32.0 81 26.0 82 18.5 83 21.0 84 18.0 85 12.0 86 14.5 87 16.5 88 13.5 89 12.5 90 11.5 91 9.0 92 8.0 93 4.5 94 2.0 95 3.5 96 4.0 97 5.0 98 6.0 99 3.0 100 8.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015835517923226333 2 0.006824702966552068 3 0.005490965364223381 4 0.0022622168461751907 5 0.007075848991526942 6 0.009001301849667642 7 0.010896312765387146 8 0.007359339580324338 9 0.007954860078939 10-14 0.008326632300757867 15-19 0.009342632129065312 20-24 0.01091800264936225 25-29 0.00872351912507422 30-34 0.009948807307527395 35-39 0.00636312701459067 40-44 0.004250456210559609 45-49 0.006977293202938318 50-54 0.011419914175031732 55-59 0.020284988332364518 60-64 0.035595382748825205 65-69 0.05118964827836355 70-74 0.05336929135572125 75-79 0.06160535887777606 80-84 0.048654214998958126 85-89 0.026874527293712838 90-94 0.016481267626835973 95-99 0.010051168338918668 100-104 0.0092113512523739 105-109 0.010438161531948134 110-114 0.008527168596457503 115-119 0.006269898565925755 120-124 0.005140883026379618 125-129 0.00845410793464663 130-134 0.010887941231221316 135-139 0.007581565759999074 140-144 0.0057215630780639475 145-149 0.003626015866644809 150-151 0.037216225920613806 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 5.2559064E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 94.95961852731968 #Duplication Level Relative count 1 100.0 2 34.317487665439735 3 27.300493382410526 4 24.379356253426266 5 21.99075886913619 6 21.05881431592137 7 19.672644686349752 8 20.0328921607017 9 18.309969457279347 10++ 1279.230949956927 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE