##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0964.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 50072602 Filtered Sequences 0 Sequence length 151 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.003655991354314 34.0 33.0 34.0 31.0 34.0 2 33.19470448130497 34.0 34.0 34.0 31.0 34.0 3 33.20213958523665 34.0 34.0 34.0 31.0 34.0 4 36.55618505704976 37.0 37.0 37.0 35.0 37.0 5 36.52234305698753 37.0 37.0 37.0 35.0 37.0 6 36.49566227854506 37.0 37.0 37.0 35.0 37.0 7 36.53005755522751 37.0 37.0 37.0 35.0 37.0 8 36.50327009169605 37.0 37.0 37.0 35.0 37.0 9 38.461522131404315 39.0 39.0 39.0 38.0 39.0 10-14 38.774102695921414 39.4 39.2 39.4 38.2 39.4 15-19 40.112417221697406 41.0 40.4 41.0 39.0 41.0 20-24 40.08214486636824 41.0 40.0 41.0 39.0 41.0 25-29 40.0252803718888 41.0 40.0 41.0 39.0 41.0 30-34 39.91760004403206 41.0 40.0 41.0 38.2 41.0 35-39 39.809213166114276 41.0 40.0 41.0 38.0 41.0 40-44 39.63185763743614 41.0 40.0 41.0 37.8 41.0 45-49 39.32505649696415 41.0 39.4 41.0 36.6 41.0 50-54 38.983035796701756 41.0 39.0 41.0 35.4 41.0 55-59 38.44843576133711 40.0 37.4 41.0 35.0 41.0 60-64 37.72160048722853 39.0 36.0 41.0 35.0 41.0 65-69 36.800282981100125 37.2 35.0 39.8 34.4 41.0 70-74 35.87898118815555 35.8 35.0 38.2 34.0 40.4 75-79 35.09146042380622 35.0 35.0 36.6 34.0 38.8 80-84 34.56911285736659 35.0 35.0 36.0 33.8 37.0 85-89 34.28785538247043 35.0 35.0 35.0 34.0 36.0 90-94 34.11008104591808 35.0 35.0 35.0 33.2 36.0 95-99 34.01264607738979 35.0 35.0 35.0 33.0 36.0 100-104 33.5712136868781 34.8 34.4 35.0 32.2 35.2 105-109 33.900961539805735 35.0 35.0 35.0 33.0 35.0 110-114 33.88404416850556 35.0 35.0 35.0 33.0 35.0 115-119 33.83195930980379 35.0 35.0 35.0 33.0 35.0 120-124 33.77009445604604 35.0 35.0 35.0 33.0 35.0 125-129 33.75768988797507 35.0 35.0 35.0 33.0 35.0 130-134 33.74566374241946 35.0 35.0 35.0 33.0 35.0 135-139 33.67397776133144 35.0 35.0 35.0 33.0 35.0 140-144 33.5944620732911 35.0 35.0 35.0 33.0 35.0 145-149 33.47983344664214 35.0 35.0 35.0 33.0 35.0 150-151 32.61598066144036 34.5 33.5 35.0 30.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 492.0 1 1223.0 2 139094.0 3 37964.0 4 32669.0 5 31456.0 6 33008.0 7 36223.0 8 40271.0 9 39246.0 10 38766.0 11 39139.0 12 35952.0 13 34849.0 14 33009.0 15 32071.0 16 32761.0 17 33753.0 18 34715.0 19 37161.0 20 40095.0 21 45572.0 22 51717.0 23 61851.0 24 76111.0 25 92241.0 26 111420.0 27 135079.0 28 164696.0 29 205198.0 30 262845.0 31 345029.0 32 481301.0 33 719408.0 34 1250258.0 35 3152131.0 36 1.7034405E7 37 2.4230508E7 38 868915.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 17.109341126572225 33.13295486093335 23.819822124590125 25.93788188790429 2 22.553269126739934 32.655035475469354 27.52453833556641 17.2671570622243 3 18.637252103519618 30.86639971182682 28.738643973907514 21.757704210746052 4 19.895685118123644 28.43644410315454 30.23226697436015 21.435603804361662 5 21.984915045898074 29.146444528306333 29.588092215367585 19.28054821042801 6 20.730829683773326 29.5033332177575 28.74308522290504 21.02275187556413 7 22.199514496022132 29.363804997164905 29.14110208272494 19.29557842408802 8 20.32492157573333 29.067048566273684 30.2005522178841 20.407477640108887 9 20.41873532763635 28.005213644793887 30.99972597607044 20.57632505149932 10-14 20.89861231679295 29.26139850678135 29.14476666441375 20.695222512011945 15-19 20.822266874598448 29.110308766971343 29.206480852181254 20.86094350624895 20-24 21.02113690511593 28.987818075115584 29.080537622858945 20.91050739690954 25-29 21.026778236457027 29.023272845217917 28.976305753982373 20.973643164342683 30-34 21.094141717143373 28.88618988106576 28.968394313381395 21.05127408840947 35-39 21.131547332414574 28.903826960567418 28.890093225902685 21.074532481115327 40-44 21.151790617666528 28.89940369091768 28.8897073452341 21.059098346181692 45-49 21.143218808700055 28.825432420502505 28.91412970907031 21.117219061727134 50-54 21.15360964672855 28.884345048076472 28.86641500154284 21.09563030365214 55-59 21.152360564607548 28.876819361884976 28.889762383728936 21.081057689778547 60-64 21.132984635342705 28.854167708436467 28.86890588341544 21.143941772805384 65-69 21.217638799215276 28.850923424566936 28.857755369881644 21.073682406336143 70-74 21.148511362111545 28.86810510202198 28.862999414224632 21.120384121641845 75-79 21.1340213684408 28.875308376361907 28.83239370845238 21.158276546744915 80-84 21.17414932450964 28.810320308078435 28.89488205670298 21.120648310708944 85-89 21.153096956499194 28.86464702944021 28.88618432299575 21.096071691064846 90-94 21.17179650032621 28.80099369170452 28.89813157161385 21.12907823635542 95-99 21.151294845388993 28.851233739908277 28.875206566044948 21.122264848657778 100-104 21.145727481378213 28.875283160117444 28.88479942522925 21.094189933275096 105-109 21.134944353279504 28.83796554846069 28.866421606199378 21.160668492060427 110-114 21.142975678099823 28.86265782743298 28.865323386705505 21.129043107761696 115-119 21.15307547908128 28.88001751517048 28.88168240065334 21.085224605094897 120-124 21.094626290380166 28.857461272507578 28.905682476794947 21.14222996031731 125-129 21.161838095938318 28.861740443149987 28.895636864980958 21.08078459593074 130-134 21.14359682766962 28.887520754158984 28.86899804638142 21.099884371789976 135-139 21.15456507145663 28.849959097929677 28.86283736219019 21.132638468423504 140-144 21.151835176105234 28.923401011030432 28.826839788866852 21.09792402399748 145-149 21.158247073068477 28.972886754359024 28.84405925963301 21.024806912939486 150-151 21.175790910081204 28.86338530507097 28.78479213460951 21.176031650238315 >>END_MODULE >>Per base GC content pass #Base %GC 1 43.04722301447652 2 39.820426188964234 3 40.39495631426567 4 41.33128892248531 5 41.265463256326086 6 41.75358155933746 7 41.495092920110146 8 40.73239921584222 9 40.99506037913567 10-14 41.5938348288049 15-19 41.6832103808474 20-24 41.931644302025475 25-29 42.00042140079971 30-34 42.145415805552844 35-39 42.206079813529904 40-44 42.21088896384822 45-49 42.26043787042719 50-54 42.24923995038069 55-59 42.233418254386095 60-64 42.27692640814809 65-69 42.29132120555142 70-74 42.26889548375339 75-79 42.29229791518571 80-84 42.294797635218586 85-89 42.24916864756404 90-94 42.300874736681635 95-99 42.27355969404677 100-104 42.239917414653306 105-109 42.29561284533993 110-114 42.27201878586152 115-119 42.23830008417618 120-124 42.23685625069747 125-129 42.24262269186906 130-134 42.243481199459595 135-139 42.28720353988014 140-144 42.249759200102716 145-149 42.18305398600797 150-151 42.35182256031952 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 11.0 2 18.0 3 33.0 4 55.0 5 74.0 6 103.0 7 136.5 8 156.0 9 169.5 10 191.0 11 231.0 12 255.0 13 273.0 14 324.0 15 403.5 16 587.0 17 2631.5 18 5206.5 19 10431.5 20 17333.0 21 22528.0 22 40513.0 23 68354.5 24 113155.0 25 166905.5 26 218654.5 27 339388.5 28 540679.0 29 707272.0 30 786060.5 31 839077.5 32 912286.0 33 1018415.5 34 1180883.5 35 1331396.0 36 1521880.0 37 1724745.5 38 1920186.5 39 2250205.0 40 2500226.0 41 2584751.5 42 2662755.0 43 2769116.5 44 2879964.5 45 2887726.0 46 2755882.5 47 2623754.5 48 2451601.5 49 2164040.5 50 1843845.0 51 1528540.0 52 1230597.5 53 972600.0 54 756302.0 55 573912.0 56 410571.0 57 266290.0 58 174914.5 59 114117.0 60 68714.0 61 43182.0 62 26744.5 63 15819.5 64 9388.5 65 5486.5 66 3325.0 67 2222.0 68 1443.5 69 983.0 70 693.0 71 472.5 72 332.5 73 206.0 74 136.5 75 115.5 76 93.5 77 75.0 78 59.5 79 52.0 80 46.0 81 34.5 82 24.5 83 27.0 84 25.0 85 17.0 86 14.0 87 14.5 88 13.5 89 10.0 90 9.5 91 11.0 92 10.0 93 10.0 94 10.5 95 5.0 96 1.5 97 5.5 98 7.5 99 7.0 100 19.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01599477494698598 2 0.0069838591571494526 3 0.005412141354267949 4 0.0022507318473284055 5 0.007003830158456715 6 0.008919049183823122 7 0.010890187012849861 8 0.007183569170222071 9 0.00795245272055165 10-14 0.008216069937807506 15-19 0.009272935326987801 20-24 0.010963680297660585 25-29 0.008694175709103354 30-34 0.0099563429917223 35-39 0.0063735453571995325 40-44 0.004378442326604078 45-49 0.007295806197568882 50-54 0.011593166258865478 55-59 0.020179498560909618 60-64 0.03506468467526413 65-69 0.05065245061560811 70-74 0.052834082798413395 75-79 0.0609203412277237 80-84 0.048339009824174904 85-89 0.026735978290083666 90-94 0.01657912644523646 95-99 0.010145268664088996 100-104 0.009266544606569477 105-109 0.01044683078382865 110-114 0.008607501563429838 115-119 0.0061754330242314946 120-124 0.005018313208488746 125-129 0.008368648387794986 130-134 0.01080071692699333 135-139 0.007474746369281947 140-144 0.00561824208775889 145-149 0.003532470711228468 150-151 0.03721496238601701 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 5.0072602E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 95.35418294139302 #Duplication Level Relative count 1 100.0 2 30.337585362710993 3 21.704677232315422 4 19.15345960572091 5 16.84705579177941 6 15.461925009663704 7 14.38603272774127 8 13.767555727354722 9 12.891379976807112 10++ 1043.9440793712151 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE