##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0965.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 59113878 Filtered Sequences 0 Sequence length 151 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.00632738051799 34.0 33.0 34.0 31.0 34.0 2 33.16121576391926 34.0 33.0 34.0 31.0 34.0 3 33.326465233764566 34.0 34.0 34.0 31.0 34.0 4 36.62566783387143 37.0 37.0 37.0 35.0 37.0 5 36.595104469376885 37.0 37.0 37.0 35.0 37.0 6 36.579183047337885 37.0 37.0 37.0 35.0 37.0 7 36.6332049303211 37.0 37.0 37.0 36.0 37.0 8 36.63914285914384 37.0 37.0 37.0 36.0 37.0 9 38.609219361314786 39.0 39.0 39.0 39.0 39.0 10-14 38.954532497428104 39.4 39.4 39.4 39.0 39.4 15-19 40.317714956883734 41.0 41.0 41.0 39.0 41.0 20-24 40.28909538974926 41.0 41.0 41.0 39.0 41.0 25-29 40.22713270816034 41.0 41.0 41.0 39.0 41.0 30-34 40.130808992094885 41.0 40.2 41.0 39.0 41.0 35-39 40.00446167987828 41.0 40.0 41.0 38.4 41.0 40-44 39.7708462808006 41.0 40.0 41.0 37.8 41.0 45-49 39.33743645104793 41.0 39.2 41.0 36.4 41.0 50-54 38.86468622139796 40.4 38.2 41.0 35.2 41.0 55-59 38.13914516655463 39.4 36.6 41.0 35.0 41.0 60-64 37.22329594076031 37.8 35.2 40.4 35.0 41.0 65-69 36.21857780672079 36.2 35.0 38.6 34.2 40.8 70-74 35.3561542113681 35.0 35.0 36.8 34.0 39.0 75-79 34.731399266344866 35.0 35.0 35.8 34.0 37.0 80-84 34.39775169884811 35.0 35.0 35.0 34.0 36.0 85-89 34.26299365438349 35.0 35.0 35.0 34.0 36.0 90-94 34.16710739904427 35.0 35.0 35.0 34.0 35.2 95-99 34.10426920054205 35.0 35.0 35.0 33.6 35.0 100-104 33.6671487937232 34.8 34.4 35.0 32.2 35.0 105-109 34.002044741507234 35.0 35.0 35.0 33.0 35.0 110-114 33.98035301625787 35.0 35.0 35.0 33.0 35.0 115-119 33.92539017656733 35.0 35.0 35.0 33.0 35.0 120-124 33.858918029366976 35.0 35.0 35.0 33.0 35.0 125-129 33.849252431045045 35.0 35.0 35.0 33.0 35.0 130-134 33.837636891289726 35.0 35.0 35.0 33.0 35.0 135-139 33.76325432075358 35.0 35.0 35.0 33.0 35.0 140-144 33.67544592828101 35.0 35.0 35.0 33.0 35.0 145-149 33.55795458047939 35.0 35.0 35.0 33.0 35.0 150-151 32.67770613864988 34.5 33.5 35.0 30.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 582.0 1 1357.0 2 122110.0 3 34542.0 4 30583.0 5 28986.0 6 28479.0 7 32632.0 8 37374.0 9 37601.0 10 39179.0 11 40282.0 12 37772.0 13 36421.0 14 35424.0 15 35349.0 16 34859.0 17 35269.0 18 36845.0 19 39251.0 20 41152.0 21 47443.0 22 53516.0 23 60659.0 24 74621.0 25 85509.0 26 104177.0 27 127793.0 28 156073.0 29 200141.0 30 260898.0 31 350538.0 32 498634.0 33 765714.0 34 1414850.0 35 4242176.0 36 2.6820272E7 37 2.2826542E7 38 258273.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 18.255917575810816 31.59106250589106 22.112865816057646 28.040154102240482 2 24.276328385348435 31.269926585930683 25.85329566489556 18.600449363825316 3 20.262920164511364 29.179050168813305 27.24101766778857 23.317011998886763 4 21.608869765892823 26.59449540495984 28.553083177392086 23.24355165175525 5 23.62586631805349 27.545133837893992 28.090713186860444 20.73828665719207 6 22.17906077811022 27.965885215928175 27.17046244751628 22.684591558445327 7 24.056680057693534 27.656897160463128 27.565032323906287 20.72139045793705 8 21.939746390433445 27.47333208807427 28.57486867470978 22.012052846782503 9 21.917849447768937 26.436208657700856 29.360376012275868 22.28556588225434 10-14 22.575509418192855 27.585382795915294 27.56726912646445 22.271838659427402 15-19 22.445957705063364 27.484943949063695 27.57633406498052 22.492764280892416 20-24 22.603906470221684 27.37492780127313 27.481836343443767 22.539329385061425 25-29 22.662523957683938 27.374153385595307 27.4290332953334 22.53428936138735 30-34 22.709154639468412 27.229899057847962 27.37172096766286 22.68922533502076 35-39 22.734548983690534 27.283799836841325 27.30439023834357 22.677260941124572 40-44 22.769939834752204 27.256797692680752 27.31576780519382 22.657494667373225 45-49 22.77538393992533 27.211880742697154 27.303699609867344 22.709035707510168 50-54 22.75526960952669 27.277416177661152 27.288096462830584 22.679217749981575 55-59 22.787090647722234 27.234770634768847 27.2788644239684 22.699274293540515 60-64 22.772455015523065 27.21131452155611 27.267767628724666 22.748462834196165 65-69 22.79723584770146 27.240235924491557 27.251588062997527 22.71094016480945 70-74 22.804969643539945 27.24114047733429 27.280625040970722 22.673264838155045 75-79 22.75384314671163 27.23518048935662 27.268414099290716 22.742562264641037 80-84 22.76711016279258 27.248052985633592 27.26139112675457 22.72344572481926 85-89 22.76499992468439 27.274218509834718 27.255130545644057 22.705651019836832 90-94 22.741569655015972 27.26440472384396 27.261455687466384 22.732569933673684 95-99 22.726208034339017 27.29286334224062 27.28638705620916 22.69454156721121 100-104 22.75454949974583 27.294021911540174 27.252956366659078 22.69847222205492 105-109 22.758581644643655 27.21177367188365 27.278445490950137 22.75119919252256 110-114 22.77665092074454 27.24218094654491 27.256574730460407 22.724593402250143 115-119 22.755384830195936 27.291887727667465 27.25973354382202 22.692993898314587 120-124 22.762526043990423 27.237945443027556 27.275352448218925 22.724176064763093 125-129 22.743794051849758 27.254032502078324 27.275796738348884 22.726376707723038 130-134 22.767237179185468 27.264254288944144 27.25108504956686 22.71742348230353 135-139 22.71572022635628 27.26748144057757 27.26196963028394 22.754828702782216 140-144 22.764502282862896 27.28865475750284 27.242108047024544 22.704734912609727 145-149 22.802908787429672 27.299952654422782 27.220658438414468 22.67648011973308 150-151 22.77969735342475 27.221934007588604 27.149656591737553 22.84871204724909 >>END_MODULE >>Per base GC content pass #Base %GC 1 46.2960716780513 2 42.876777749173755 3 43.57993216339813 4 44.852421417648074 5 44.36415297524556 6 44.863652336555546 7 44.77807051563058 8 43.95179923721595 9 44.203415330023276 10-14 44.84734807762026 15-19 44.93872198595578 20-24 45.14323585528311 25-29 45.196813319071296 30-34 45.39837997448918 35-39 45.4118099248151 40-44 45.42743450212543 45-49 45.484419647435494 50-54 45.43448735950826 55-59 45.48636494126275 60-64 45.520917849719226 65-69 45.508176012510916 70-74 45.47823448169499 75-79 45.49640541135266 80-84 45.49055588761185 85-89 45.470650944521225 90-94 45.47413958868965 95-99 45.42074960155023 100-104 45.45302172180075 105-109 45.50978083716621 110-114 45.50124432299468 115-119 45.44837872851052 120-124 45.48670210875352 125-129 45.470170759572795 130-134 45.484660661489 135-139 45.470548929138495 140-144 45.46923719547262 145-149 45.47938890716275 150-151 45.62840940067384 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 7.5 2 9.5 3 19.5 4 35.5 5 59.5 6 81.5 7 104.5 8 126.0 9 144.0 10 148.5 11 170.5 12 201.5 13 202.5 14 299.0 15 1654.5 16 4092.0 17 6584.0 18 9940.0 19 10454.5 20 10022.5 21 14006.5 22 22535.5 23 32310.0 24 43161.0 25 54503.0 26 72142.5 27 100731.0 28 130139.5 29 154612.5 30 185385.5 31 244603.0 32 310175.0 33 400574.0 34 547993.5 35 717778.0 36 921464.0 37 1173675.5 38 1442837.5 39 1693931.0 40 2039739.0 41 2482714.0 42 2884299.0 43 3317271.0 44 3730939.0 45 4062546.5 46 4268900.5 47 4272682.0 48 4105756.0 49 3791389.0 50 3393746.0 51 2938184.5 52 2455570.5 53 1999307.0 54 1536946.0 55 1111269.5 56 796961.5 57 565878.5 58 394789.5 59 282340.0 60 176487.0 61 87262.5 62 53422.0 63 32137.5 64 14705.0 65 5524.5 66 2253.0 67 1118.0 68 759.0 69 504.0 70 326.5 71 248.5 72 182.5 73 126.0 74 102.0 75 79.5 76 60.5 77 59.5 78 50.0 79 39.5 80 32.5 81 27.0 82 19.0 83 14.5 84 21.0 85 19.0 86 12.5 87 15.5 88 18.5 89 15.5 90 10.0 91 7.5 92 11.5 93 13.5 94 6.5 95 5.0 96 7.0 97 3.5 98 1.5 99 2.5 100 10.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0160385349781992 2 0.00692054072311074 3 0.0056010536138400525 4 0.002261736237301163 5 0.007165829993423879 6 0.008984353894021298 7 0.01080456944475881 8 0.007370519660374844 9 0.008025188264589917 10-14 0.008334760240226499 15-19 0.009332157162823932 20-24 0.011052903685324113 25-29 0.008763086055697446 30-34 0.010056183422782717 35-39 0.006447893673969418 40-44 0.004361412391181645 45-49 0.007172596593984242 50-54 0.011574270258500042 55-59 0.020520392859355294 60-64 0.03602132142303369 65-69 0.05199625035596548 70-74 0.05422584524060493 75-79 0.062485157884583385 80-84 0.04936742603826465 85-89 0.026905018818085324 90-94 0.016621815946502444 95-99 0.010025733720261087 100-104 0.00921137334282146 105-109 0.010397220091024988 110-114 0.008507308554515742 115-119 0.0062344074262899824 120-124 0.005116565013718099 125-129 0.008426109347791394 130-134 0.010894226902183612 135-139 0.007513633262226512 140-144 0.00569003441120882 145-149 0.0035971248578887003 150-151 0.037409151197964036 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 5.9113878E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 95.44695646035193 #Duplication Level Relative count 1 100.0 2 29.506163268470424 3 22.474610434917434 4 18.6836188851849 5 16.79975191875339 6 16.117528490580664 7 14.722071478409179 8 13.466160167454841 9 13.504922862237382 10++ 1305.2329637956432 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE