##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0966.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 39674872 Filtered Sequences 0 Sequence length 151 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.070914608117704 34.0 33.0 34.0 31.0 34.0 2 33.27243104905291 34.0 34.0 34.0 31.0 34.0 3 33.33799920009824 34.0 34.0 34.0 31.0 34.0 4 36.599531864904314 37.0 37.0 37.0 35.0 37.0 5 36.616760477513324 37.0 37.0 37.0 35.0 37.0 6 36.601811998284454 37.0 37.0 37.0 36.0 37.0 7 36.54994750833727 37.0 37.0 37.0 35.0 37.0 8 36.601854266851824 37.0 37.0 37.0 36.0 37.0 9 38.57457848887326 39.0 39.0 39.0 39.0 39.0 10-14 38.90475743437811 39.4 39.4 39.4 38.8 39.4 15-19 40.24994590026654 41.0 41.0 41.0 39.0 41.0 20-24 40.19682932814503 41.0 41.0 41.0 39.0 41.0 25-29 40.106228713226855 41.0 40.6 41.0 39.0 41.0 30-34 39.96070578375149 41.0 40.0 41.0 38.6 41.0 35-39 39.73170076515937 41.0 40.0 41.0 37.6 41.0 40-44 39.30318746333952 41.0 39.4 41.0 36.2 41.0 45-49 38.582548021831045 40.0 37.6 41.0 35.0 41.0 50-54 37.82200624617012 39.2 35.8 41.0 35.0 41.0 55-59 36.93180116623943 37.6 35.0 40.6 34.2 41.0 60-64 36.07428825983358 35.6 35.0 39.2 34.0 41.0 65-69 35.30546056456086 35.0 35.0 37.0 33.4 40.2 70-74 34.71694890408216 35.0 35.0 36.0 33.0 38.4 75-79 34.27686969223241 35.0 35.0 35.0 33.0 36.8 80-84 34.04538856231218 35.0 35.0 35.0 33.0 36.0 85-89 33.94644040187451 35.0 35.0 35.0 33.0 36.0 90-94 33.83126051169113 35.0 35.0 35.0 33.0 35.2 95-99 33.73927474800676 35.0 35.0 35.0 33.0 35.0 100-104 33.22998207530449 34.8 33.8 35.0 31.6 35.0 105-109 33.576504307310685 35.0 35.0 35.0 33.0 35.0 110-114 33.53047807690469 35.0 35.0 35.0 32.8 35.0 115-119 33.44149232289899 35.0 35.0 35.0 32.0 35.0 120-124 33.34102909267104 35.0 35.0 35.0 32.0 35.0 125-129 33.318520266429594 35.0 35.0 35.0 32.0 35.0 130-134 33.294812837707454 35.0 35.0 35.0 32.0 35.0 135-139 33.180953425634236 35.0 35.0 35.0 31.4 35.0 140-144 33.04791229068111 35.0 35.0 35.0 31.0 35.0 145-149 32.86371676258968 35.0 34.6 35.0 31.0 35.0 150-151 31.83747761051378 34.5 32.5 35.0 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 417.0 1 904.0 2 95954.0 3 28869.0 4 29290.0 5 28192.0 6 27605.0 7 30272.0 8 34328.0 9 36720.0 10 37704.0 11 37488.0 12 35876.0 13 35912.0 14 36748.0 15 38199.0 16 39245.0 17 41279.0 18 42489.0 19 44813.0 20 48065.0 21 53103.0 22 59931.0 23 71055.0 24 81288.0 25 94139.0 26 112486.0 27 136472.0 28 164846.0 29 207136.0 30 264112.0 31 347432.0 32 483640.0 33 736252.0 34 1364252.0 35 4505069.0 36 1.9999592E7 37 9882556.0 38 361142.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 19.51548456484443 29.562924024867588 20.88207961831031 30.03951179197767 2 26.539977867639692 29.410232740658415 24.795702162011278 19.254087229690615 3 21.915618010171496 27.495011320847173 25.821913972047266 24.76745669693407 4 22.853336189276437 25.58281693501332 26.674794241154398 24.889052634555842 5 24.812396082631878 26.24971182552111 26.724493300664903 22.213398791182108 6 23.56140372590677 26.08803987904323 25.951291363495628 24.399265031554375 7 25.372552371722563 26.19724376721631 26.171862248506116 22.25834161255501 8 22.93654135938758 26.12716975150003 27.297546932159726 23.638741956952657 9 23.361056082450204 25.09470277729864 27.760216583331548 23.784024556919608 10-14 24.006355696967137 26.113451356643335 26.023995974472513 23.85619697191701 15-19 23.983661549619868 25.966966901549405 26.03439360080721 24.01497794802352 20-24 24.1387132350413 25.830651967180025 25.9630720338261 24.067562763952573 25-29 24.162429216429874 25.828038237766854 25.92187244739348 24.087660098409792 30-34 24.215388270371346 25.733846667703595 25.851595194077458 24.199169867847598 35-39 24.28542580846527 25.74860191808736 25.782091738565267 24.183880534882103 40-44 24.325547562166918 25.75425295675096 25.734832277958613 24.185367203123512 45-49 24.323229182326322 25.672334440713517 25.746683581362095 24.257752795598066 50-54 24.326134792345698 25.705564319845735 25.724856384753654 24.243444503054913 55-59 24.35599168956932 25.708385418735475 25.68724268581088 24.248380205884327 60-64 24.315321891145956 25.695718847819265 25.711530089689894 24.277429171344885 65-69 24.342843232242245 25.70182616564326 25.67860883175821 24.276721770356282 70-74 24.36970339971498 25.719557370521244 25.68600936674953 24.224729863014254 75-79 24.342056517192244 25.690428718196014 25.6664910873864 24.30102367722534 80-84 24.343467814443525 25.707342673730505 25.729464977605925 24.219724534220045 85-89 24.361813961486234 25.726615642918375 25.658974110296295 24.252596285299095 90-94 24.357771771505966 25.679194762013623 25.682754278198132 24.280279188282282 95-99 24.30345270123948 25.71174963318813 25.6964452087666 24.288352456805786 100-104 24.341005371210795 25.743405650018303 25.666073056135826 24.24951592263508 105-109 24.30517825903492 25.68768323351766 25.695047852098252 24.312090655349163 110-114 24.337152287382665 25.685499223654762 25.699805202348962 24.27754328661361 115-119 24.369972494840166 25.7363956313943 25.646019979204286 24.247611894561246 120-124 24.292980047389147 25.714128586449696 25.677945685581026 24.31494568058013 125-129 24.336323632991657 25.708102645852783 25.68010979995425 24.27546392120131 130-134 24.359917458677156 25.745638286551454 25.6238085257813 24.27063572899009 135-139 24.3573773559424 25.69518805421241 25.640994035633145 24.306440554212045 140-144 24.372876900487757 25.705491431458828 25.645598292361438 24.276033375691977 145-149 24.375813830718773 25.750332388252062 25.640294157175607 24.233559623853555 150-151 24.38337725847485 25.644040103440513 25.559624003360454 24.412958634724177 >>END_MODULE >>Per base GC content pass #Base %GC 1 49.5549963568221 2 45.79406509733031 3 46.68307470710557 4 47.74238882383228 5 47.025794873813986 6 47.96066875746114 7 47.63089398427757 8 46.57528331634024 9 47.145080639369816 10-14 47.86255266888415 15-19 47.99863949764339 20-24 48.206275998993874 25-29 48.25008931483967 30-34 48.41455813821894 35-39 48.46930634334738 40-44 48.51091476529043 45-49 48.58098197792439 50-54 48.56957929540061 55-59 48.604371895453646 60-64 48.59275106249085 65-69 48.61956500259853 70-74 48.59443326272923 75-79 48.643080194417585 80-84 48.56319234866357 85-89 48.614410246785326 90-94 48.638050959788245 95-99 48.59180515804526 100-104 48.590521293845875 105-109 48.617268914384084 110-114 48.61469557399627 115-119 48.617584389401415 120-124 48.607925727969274 125-129 48.61178755419297 130-134 48.630553187667246 135-139 48.66381791015444 140-144 48.648910276179734 145-149 48.60937345457233 150-151 48.79633589319903 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6.0 1 9.5 2 15.0 3 21.5 4 32.0 5 44.0 6 56.5 7 71.0 8 87.0 9 105.5 10 115.0 11 116.5 12 510.0 13 2066.5 14 3135.0 15 2833.5 16 2855.0 17 3415.0 18 4762.0 19 8347.5 20 15748.5 21 25847.5 22 35490.0 23 53681.5 24 74731.5 25 91880.0 26 117646.0 27 149587.0 28 184460.0 29 205900.5 30 218579.0 31 261811.5 32 307507.5 33 356553.5 34 426952.0 35 500970.5 36 551870.5 37 571342.0 38 613851.0 39 686487.5 40 776270.5 41 876464.0 42 954475.0 43 1026005.0 44 1158232.0 45 1294457.5 46 1426469.0 47 1602469.0 48 1790058.0 49 1972120.0 50 2147886.0 51 2295474.5 52 2366153.5 53 2345375.5 54 2253750.0 55 2055395.0 56 1760979.5 57 1441181.5 58 1157689.5 59 921445.0 60 710085.5 61 544437.5 62 400988.0 63 279652.0 64 195154.0 65 136338.0 66 95454.5 67 70162.5 68 50392.0 69 37151.5 70 25238.0 71 12891.0 72 7116.0 73 3729.0 74 1437.5 75 640.0 76 446.0 77 337.0 78 246.0 79 194.5 80 158.0 81 129.0 82 109.5 83 91.0 84 68.5 85 56.5 86 46.5 87 40.0 88 36.5 89 32.5 90 26.5 91 21.0 92 17.0 93 16.5 94 14.0 95 13.0 96 14.0 97 9.5 98 6.0 99 6.5 100 12.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01564718343640781 2 0.006669208661845211 3 0.005156916448274868 4 0.002215508092880552 5 0.006870847623654589 6 0.008844388962363885 7 0.010775082021688689 8 0.007246400190024558 9 0.007866439997588397 10-14 0.008194607407933163 15-19 0.009183142418203644 20-24 0.010834061418017934 25-29 0.008602422208192632 30-34 0.009797637154317727 35-39 0.006347594517759251 40-44 0.0042757541851678816 45-49 0.007208592884685299 50-54 0.011785293220353679 55-59 0.020888788248642615 60-64 0.03650471764596997 65-69 0.05262474444782078 70-74 0.05505247754800569 75-79 0.06343309689820802 80-84 0.05008258123680903 85-89 0.027169841909004774 90-94 0.016533386673560028 95-99 0.010059263707265394 100-104 0.009150880184314142 105-109 0.010369787708451839 110-114 0.008434557772486324 115-119 0.006203422660065545 120-124 0.005012744590581162 125-129 0.008335754681199728 130-134 0.010761471391766558 135-139 0.0074762686064872505 140-144 0.005581366462883611 145-149 0.0034984359873927256 150-151 0.03726161989886193 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 3.9674872E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 94.2194761751561 #Duplication Level Relative count 1 100.0 2 40.032186682760006 3 32.53537182324147 4 28.44498088915711 5 27.311741433648496 6 26.547307718098303 7 24.36129551398109 8 23.992489774022665 9 22.23563334003889 10++ 1015.6507744920539 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE