##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename H0967.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 59250486 Filtered Sequences 0 Sequence length 151 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.9743251726239 34.0 33.0 34.0 31.0 34.0 2 33.15908483856149 34.0 33.0 34.0 31.0 34.0 3 33.2604698634877 34.0 34.0 34.0 31.0 34.0 4 36.54266292431762 37.0 37.0 37.0 35.0 37.0 5 36.517104990497465 37.0 37.0 37.0 35.0 37.0 6 36.50907285384967 37.0 37.0 37.0 35.0 37.0 7 36.52020408743989 37.0 37.0 37.0 35.0 37.0 8 36.43580727759769 37.0 37.0 37.0 35.0 37.0 9 38.42101060571891 39.0 39.0 39.0 38.0 39.0 10-14 38.76112365390556 39.4 39.4 39.4 38.2 39.4 15-19 40.06620117175073 41.0 40.0 41.0 39.0 41.0 20-24 40.01423253135848 41.0 40.0 41.0 39.0 41.0 25-29 39.91893209112242 41.0 40.0 41.0 38.2 41.0 30-34 39.767972225578035 41.0 40.0 41.0 38.0 41.0 35-39 39.54680772745054 41.0 40.0 41.0 37.4 41.0 40-44 39.15234170399885 41.0 39.4 41.0 35.8 41.0 45-49 38.491997797283894 40.0 37.6 41.0 35.0 41.0 50-54 37.803083265848656 39.4 36.2 41.0 34.8 41.0 55-59 36.960537711032444 38.0 35.0 40.6 34.0 41.0 60-64 36.11315084234077 36.4 35.0 39.4 33.6 41.0 65-69 35.32646107240369 35.0 35.0 37.6 33.0 40.6 70-74 34.698635788405184 35.0 35.0 36.2 33.0 39.0 75-79 34.21377973507255 35.0 35.0 35.4 33.0 37.2 80-84 33.93642603370375 35.0 35.0 35.0 33.0 36.2 85-89 33.79808841399208 35.0 35.0 35.0 33.0 36.0 90-94 33.65801391401245 35.0 35.0 35.0 33.0 35.8 95-99 33.549119232540974 35.0 35.0 35.0 32.2 35.0 100-104 33.028706539217254 34.8 33.8 35.0 30.8 35.0 105-109 33.37854687976737 35.0 35.0 35.0 32.0 35.0 110-114 33.3326353913789 35.0 35.0 35.0 32.0 35.0 115-119 33.24245561800118 35.0 35.0 35.0 31.0 35.0 120-124 33.14303514067378 35.0 35.0 35.0 31.0 35.0 125-129 33.117969753024475 35.0 35.0 35.0 31.0 35.0 130-134 33.0917046385071 35.0 35.0 35.0 31.0 35.0 135-139 32.9742813181313 35.0 34.8 35.0 31.0 35.0 140-144 32.834173120537784 35.0 34.0 35.0 30.8 35.0 145-149 32.641305794521244 35.0 34.0 35.0 30.0 35.0 150-151 31.624654893126106 34.5 32.5 35.0 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 0 723.0 1 1435.0 2 181168.0 3 54696.0 4 53235.0 5 54186.0 6 55289.0 7 60822.0 8 67669.0 9 70143.0 10 68836.0 11 68468.0 12 66448.0 13 63683.0 14 63099.0 15 61365.0 16 64749.0 17 67304.0 18 70075.0 19 75730.0 20 79315.0 21 86220.0 22 98400.0 23 117262.0 24 139325.0 25 160803.0 26 192829.0 27 234856.0 28 284860.0 29 353444.0 30 451000.0 31 598236.0 32 840008.0 33 1262619.0 34 2257327.0 35 6619878.0 36 2.7432162E7 37 1.5875415E7 38 897404.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 19.169217831188305 30.382308377385094 21.312842541945667 29.13563124948093 2 25.940612916784865 29.844558931332337 25.413221979211727 18.80160617267107 3 21.370632833665994 28.171529451617744 26.253327062420034 24.204510652296225 4 22.288890148731 26.177857341739184 27.422695929607105 24.11055657992271 5 24.339452057920557 26.880813587847683 27.06141614414015 21.71831821009161 6 23.04533568649321 26.880584000448305 26.543660275371018 23.530420037687467 7 24.856131163311257 26.814879201321546 26.771541528369415 21.557448106997786 8 22.53045110596602 26.63601926093933 27.882976783426372 22.950552849668277 9 22.72910193281244 25.669683871208406 28.52589525770523 23.075318938273924 10-14 23.394941427688178 26.756438667059832 26.693847995723562 23.154771909528428 15-19 23.351308183626063 26.620530603558855 26.68224690549471 23.345914307320367 20-24 23.457329066588663 26.503078555860814 26.598855376686597 23.440737000863923 25-29 23.51846130192219 26.485374107353348 26.53186015223113 23.46430443849333 30-34 23.607202161233875 26.378780341561875 26.43824203604587 23.575775461158376 35-39 23.65543497148741 26.401568401407665 26.37767811340403 23.565318513700895 40-44 23.6713889587667 26.401026137872698 26.38678495003638 23.540799953324225 45-49 23.698062311717884 26.324548952596473 26.36384130527794 23.613547430407706 50-54 23.65619329922544 26.38430780562866 26.3407726161805 23.6187262789654 55-59 23.681938666271744 26.373319486032216 26.33495119449262 23.609790653203415 60-64 23.68832471530068 26.338597597062908 26.331933370839305 23.641144316797106 65-69 23.707364581750586 26.379121146087286 26.334642308610768 23.578871963551364 70-74 23.721370482127295 26.36285616298296 26.305450181813132 23.610323173076612 75-79 23.683187012945176 26.354929827384506 26.321607588967037 23.640275570703285 80-84 23.666004733075926 26.401861147672722 26.325388492338302 23.606745626913046 85-89 23.70436088407181 26.382956414726564 26.335245829796705 23.577436871404913 90-94 23.65595907248756 26.378415967244447 26.335204091281984 23.630420868986015 95-99 23.68522540176345 26.366229331562774 26.348704667121766 23.599840599552017 100-104 23.701353447505625 26.424836512322614 26.284702601852306 23.58910743831946 105-109 23.686978111335137 26.336116930844184 26.33571655488914 23.641188402931544 110-114 23.650433417030296 26.392420822651786 26.337591661000975 23.619554099316943 115-119 23.709557005534823 26.39325333737897 26.305514872788965 23.591674784297247 120-124 23.706818151728665 26.354004041530736 26.318113215615664 23.621064591124934 125-129 23.63858916382776 26.328570842824163 26.393055800928384 23.639784192419697 130-134 23.71998604253284 26.373361827837016 26.317108692624313 23.58954343700583 135-139 23.687914523458407 26.374574976457378 26.294373380781817 23.643137119302395 140-144 23.71996868464723 26.357802203642517 26.300631477940968 23.621597633769287 145-149 23.75217008643781 26.34587318131924 26.302788761078222 23.599167971164732 150-151 23.747622787211853 26.272347328189177 26.232342939086035 23.74768694551294 >>END_MODULE >>Per base GC content pass #Base %GC 1 48.304849080669236 2 44.74221908945594 3 45.57514348596222 4 46.39944672865371 5 46.05777026801216 6 46.575755724180674 7 46.41357927030904 8 45.4810039556343 9 45.804420871086364 10-14 46.5497133372166 15-19 46.69722249094643 20-24 46.89806606745259 25-29 46.98276574041552 30-34 47.182977622392244 35-39 47.220753485188304 40-44 47.21218891209092 45-49 47.31160974212559 50-54 47.27491957819085 55-59 47.29172931947516 60-64 47.32946903209779 65-69 47.28623654530195 70-74 47.33169365520391 75-79 47.323462583648464 80-84 47.272750359988976 85-89 47.281797755476724 90-94 47.28637994147357 95-99 47.285066001315464 100-104 47.290460885825084 105-109 47.32816651426668 110-114 47.26998751634724 115-119 47.301231789832066 120-124 47.3278827428536 125-129 47.27837335624746 130-134 47.30952947953867 135-139 47.331051642760805 140-144 47.34156631841652 145-149 47.35133805760254 150-151 47.49530973272479 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8.0 1 9.5 2 13.5 3 20.5 4 39.0 5 61.0 6 92.0 7 117.0 8 131.0 9 158.5 10 177.0 11 179.0 12 192.5 13 226.0 14 274.5 15 593.5 16 2776.5 17 4676.0 18 3700.0 19 4344.0 20 9262.0 21 39489.0 22 71680.5 23 91112.5 24 113735.5 25 140614.0 26 184248.0 27 223801.0 28 260344.5 29 334417.0 30 437801.5 31 541929.5 32 660206.0 33 721712.0 34 764990.5 35 876197.0 36 1011302.0 37 1117869.0 38 1172966.5 39 1275820.5 40 1439343.0 41 1600487.0 42 1770022.0 43 1979911.5 44 2185084.5 45 2347765.0 46 2498246.5 47 2699505.0 48 2945571.5 49 3073036.0 50 3022427.5 51 2940968.0 52 2926698.0 53 2871256.0 54 2702684.5 55 2466262.0 56 2170983.0 57 1818212.0 58 1477739.0 59 1186827.5 60 940724.5 61 710306.0 62 496532.0 63 343222.5 64 226816.0 65 136539.5 66 81616.5 67 48878.0 68 29282.5 69 18328.0 70 10784.0 71 5721.5 72 3454.0 73 2190.5 74 1377.0 75 983.0 76 810.0 77 691.0 78 456.0 79 307.5 80 250.5 81 169.0 82 126.5 83 100.0 84 90.0 85 73.5 86 59.0 87 49.5 88 42.0 89 34.0 90 24.5 91 23.5 92 16.5 93 11.0 94 13.0 95 10.5 96 10.0 97 12.5 98 9.5 99 6.0 100 12.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016145015249326395 2 0.007262387687419138 3 0.00574003730534801 4 0.002428672061862919 5 0.007375466928659454 6 0.00898895580367054 7 0.010833666410770031 8 0.007361964929705387 9 0.007925673386037712 10-14 0.008296978357274573 15-19 0.009322117627862158 20-24 0.010981513299317073 25-29 0.008740856572889545 30-34 0.010056288820989587 35-39 0.006441128601037973 40-44 0.004420554457561749 45-49 0.007344749881038951 50-54 0.011674165845660743 55-59 0.020231057682801118 60-64 0.03511194828005293 65-69 0.050570724432538836 70-74 0.05269357621809212 75-79 0.060719501946363774 80-84 0.04815656701955153 85-89 0.02672011838012603 90-94 0.0165858555151767 95-99 0.010101182967511863 100-104 0.009181021738792152 105-109 0.010411728943455417 110-114 0.008448875845507834 115-119 0.006283830313223084 120-124 0.005119958003382453 125-129 0.008508959740853434 130-134 0.010969023950284559 135-139 0.007649895057400879 140-144 0.005705944757988989 145-149 0.003636763418278122 150-151 0.03710518087564716 >>END_MODULE >>Sequence Length Distribution pass #Length Count 151 5.9250486E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 95.00450090185356 #Duplication Level Relative count 1 100.0 2 31.310289389067524 3 24.062165058949624 4 20.793140407288316 5 20.424705251875668 6 17.79876741693462 7 17.329849946409432 8 16.613076098606644 9 15.032154340836012 10++ 1076.400053590568 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content pass >>END_MODULE