##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename N0059.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 88976978 Filtered Sequences 0 Sequence length 150 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.013949349909367 32.0 27.0 32.0 27.0 32.0 2 30.394576313886496 32.0 32.0 32.0 27.0 32.0 3 30.660507811357675 32.0 32.0 32.0 27.0 32.0 4 30.846827389439998 32.0 32.0 32.0 27.0 32.0 5 30.796372135722567 32.0 32.0 32.0 27.0 32.0 6 35.2626241475632 37.0 37.0 37.0 32.0 37.0 7 35.20715877763347 37.0 37.0 37.0 32.0 37.0 8 35.06590838587483 37.0 37.0 37.0 32.0 37.0 9 35.0676485438739 37.0 37.0 37.0 32.0 37.0 10-14 35.04110755481041 37.0 37.0 37.0 32.0 37.0 15-19 34.98533255872098 37.0 37.0 37.0 32.0 37.0 20-24 34.94326063535221 37.0 37.0 37.0 32.0 37.0 25-29 34.93432616693275 37.0 37.0 37.0 32.0 37.0 30-34 34.892404221685304 37.0 37.0 37.0 32.0 37.0 35-39 34.826262777771575 37.0 37.0 37.0 32.0 37.0 40-44 34.75891374283357 37.0 37.0 37.0 29.0 37.0 45-49 34.68893233258608 37.0 37.0 37.0 27.0 37.0 50-54 34.62559902630094 37.0 37.0 37.0 27.0 37.0 55-59 34.556393585315966 37.0 37.0 37.0 27.0 37.0 60-64 34.48622446583879 37.0 37.0 37.0 27.0 37.0 65-69 34.40740347463812 37.0 37.0 37.0 27.0 37.0 70-74 34.32316666677531 37.0 37.0 37.0 27.0 37.0 75-79 34.26122515197134 37.0 37.0 37.0 27.0 37.0 80-84 34.16844092637086 37.0 37.0 37.0 27.0 37.0 85-89 34.057578354706536 37.0 37.0 37.0 27.0 37.0 90-94 33.92191385506485 37.0 37.0 37.0 27.0 37.0 95-99 33.78142240794018 37.0 37.0 37.0 27.0 37.0 100-104 33.64088043313856 37.0 33.0 37.0 22.0 37.0 105-109 33.48974216004503 37.0 32.0 37.0 22.0 37.0 110-114 33.35163416541299 37.0 32.0 37.0 22.0 37.0 115-119 33.21079759305829 37.0 32.0 37.0 22.0 37.0 120-124 33.105878073314656 37.0 32.0 37.0 22.0 37.0 125-129 32.97614382677731 37.0 32.0 37.0 22.0 37.0 130-134 32.881804562973585 37.0 32.0 37.0 22.0 37.0 135-139 32.79608311489294 37.0 32.0 37.0 22.0 37.0 140-144 32.67012083058159 37.0 32.0 37.0 22.0 37.0 145-149 32.42316683535824 37.0 32.0 37.0 20.2 37.0 150 30.627206489301088 37.0 27.0 37.0 13.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 6.0 4 123.0 5 1354.0 6 2226.0 7 1840.0 8 1631.0 9 1732.0 10 1765.0 11 4625.0 12 12456.0 13 19130.0 14 26043.0 15 33829.0 16 42207.0 17 49954.0 18 64208.0 19 96131.0 20 157868.0 21 241383.0 22 350344.0 23 481416.0 24 642061.0 25 826967.0 26 1041874.0 27 1292678.0 28 1602741.0 29 2010590.0 30 2584307.0 31 3479253.0 32 5048280.0 33 8230628.0 34 1.5756045E7 35 3.1071925E7 36 1.3799358E7 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 17.05332041754936 33.242043052130846 22.925634276543764 26.779002253776035 2 22.804862153121935 32.522535912547376 25.749992243546714 18.922609690783972 3 20.762031512998316 31.05079169283339 26.398423355005768 21.788753439162527 4 20.768384589153136 28.84718580155143 28.050455874717432 22.333973734578 5 22.636464631781227 28.990929493144314 28.048144341434362 20.324461533640108 6 22.06395726730431 29.182456115580408 27.3345909135241 21.418995703591186 7 23.160600670488353 28.81537930779146 27.859643529738833 20.164376491981358 8 21.261293322720856 28.912010991706822 28.861085579407952 20.965610106164366 9 21.022942868327835 28.03353854589507 29.597803617133977 21.345714968643115 10-14 21.79934458997203 28.87019770773371 27.987301745407915 21.34315595688634 15-19 21.76421640567857 28.783289966144803 27.93527422609696 21.517219402079665 20-24 21.87042851049857 28.590796534056885 27.91791828432551 21.62085667111904 25-29 21.962590048588307 28.553130908300883 27.834351031846033 21.649928011264777 30-34 21.99061828934213 28.51945207787215 27.767018176423047 21.722911456362677 35-39 22.073736016585674 28.479635544373238 27.731938482527056 21.71468995651403 40-44 22.070788936388915 28.498523543262877 27.710373730960015 21.720313789388193 45-49 22.077533831892552 28.473876147584125 27.671786021193046 21.77680399933028 50-54 22.085840421966022 28.4846002303193 27.674946091552634 21.75461325616205 55-59 22.078974914396003 28.498368177243805 27.654721171685008 21.76793573667518 60-64 22.042733276123986 28.474168869263462 27.651305445266637 21.83179240934592 65-69 22.05428371256327 28.51058661430448 27.64820514034374 21.78692453278851 70-74 22.06879842232567 28.529138282631166 27.63108766213236 21.770975632910805 75-79 21.991270050118526 28.50283774937097 27.656159044683946 21.849733155826556 80-84 22.054336878127987 28.51660680063366 27.62907402337739 21.79998229786096 85-89 22.054141189422754 28.532529774434977 27.612692407004246 21.800636629138022 90-94 22.005663378295058 28.53988647839511 27.603980839558922 21.850469303750913 95-99 22.019649003247157 28.532401146445224 27.623956331670325 21.82399351863729 100-104 22.051391030850194 28.57000181774716 27.608169589780662 21.770437561621982 105-109 22.032292556771036 28.522993127235058 27.60059919505683 21.844115120937076 110-114 22.011806010776485 28.607631178977705 27.5929247097771 21.787638100468712 115-119 22.028402883163455 28.60880165624804 27.57652643132602 21.78626902926248 120-124 22.03578363107428 28.545523321079475 27.5924779044534 21.826215143392844 125-129 22.022699971832957 28.60239913253907 27.60469323215757 21.770207663470405 130-134 22.06913821260637 28.63365593746344 27.555833128234 21.74137272169619 135-139 22.021229132015634 28.60060913859659 27.58507804956406 21.79308367982372 140-144 22.08394894449347 28.612470391874016 27.54738163314664 21.756199030485877 145-149 22.096142354755383 28.670138390487498 27.51915602053186 21.714563234225256 150 22.088299962476718 28.246399146654355 27.584205047704263 22.08109584316467 >>END_MODULE >>Per base GC content pass #Base %GC 1 43.8323226713254 2 41.7274718439059 3 42.550784952160846 4 43.10235832373114 5 42.960926165421334 6 43.4829529708955 7 43.32497716246971 8 42.22690342888523 9 42.368657836970954 10-14 43.14250054685837 15-19 43.28143580775824 20-24 43.491285181617606 25-29 43.61251805985308 30-34 43.713529745704804 35-39 43.788425973099706 40-44 43.79110272577711 45-49 43.85433783122283 50-54 43.840453678128064 55-59 43.846910651071184 60-64 43.8745256854699 65-69 43.84120824535178 70-74 43.839774055236475 75-79 43.841003205945086 80-84 43.85431917598895 85-89 43.85477781856078 90-94 43.85613268204597 95-99 43.843642521884455 100-104 43.82182859247218 105-109 43.876407677708116 110-114 43.799444111245194 115-119 43.814671912425936 120-124 43.861998774467125 125-129 43.792907635303365 130-134 43.81051093430256 135-139 43.81431281183935 140-144 43.840147974979345 145-149 43.81070558898064 150 44.169395805641386 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 362.0 1 349.0 2 463.5 3 717.0 4 970.0 5 1211.5 6 1407.5 7 1584.5 8 1799.0 9 2095.5 10 2428.5 11 2811.0 12 3255.5 13 4008.0 14 4913.5 15 5951.0 16 7873.5 17 11356.5 18 17101.0 19 23909.0 20 38081.0 21 61918.0 22 95129.0 23 132407.5 24 158561.0 25 204041.0 26 264131.5 27 315414.0 28 396991.5 29 518436.0 30 693773.0 31 911680.0 32 1091183.5 33 1257505.5 34 1480087.0 35 1754082.5 36 2092515.5 37 2471164.0 38 2905348.5 39 3390075.0 40 3876337.0 41 4376606.0 42 4892798.5 43 5316352.0 44 5533119.0 45 5601771.0 46 5517485.5 47 5290736.5 48 4974297.0 49 4542694.0 50 4027525.0 51 3448623.5 52 2803733.5 53 2219552.0 54 1761932.0 55 1379221.5 56 1025479.5 57 705466.0 58 468838.5 59 304572.0 60 184005.0 61 107639.5 62 69396.0 63 43478.0 64 27505.0 65 17947.5 66 9771.0 67 4868.0 68 3062.5 69 2250.0 70 1836.0 71 1597.5 72 1526.0 73 1452.5 74 1384.5 75 1289.5 76 1226.0 77 1219.5 78 1177.0 79 1145.0 80 1144.0 81 1139.5 82 1104.0 83 1127.5 84 1148.5 85 1140.0 86 1183.0 87 1253.0 88 1351.0 89 1443.0 90 1631.0 91 1977.0 92 2494.0 93 3240.5 94 4238.0 95 9422.0 96 15302.0 97 13010.5 98 6664.0 99 3495.0 100 13600.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.07838094928330787 2 0.057346294678607766 3 0.04412939266154892 4 0.026267468872678505 5 0.017134769400686995 6 0.02235859257885787 7 0.008091980826770718 8 0.004177485101820384 9 0.003433472420247853 10-14 0.0037101732090743743 15-19 0.005218878078776737 20-24 0.009943470995384895 25-29 0.020141165055077508 30-34 0.0270573361122694 35-39 0.028025901261784815 40-44 0.02744799896440628 45-49 0.03390270233722705 50-54 0.030036533719992153 55-59 0.0341317503500737 60-64 0.03133304887023697 65-69 0.024262905400091246 70-74 0.023290294260162443 75-79 0.02576823861111579 80-84 0.03827327109266399 85-89 0.040209502282714076 90-94 0.05141509750983002 95-99 0.04787080990770444 100-104 0.0492457723165199 105-109 0.057930490738851564 110-114 0.05867517775215966 115-119 0.06868900402528842 120-124 0.06108681281578253 125-129 0.07096307541485619 130-134 0.06001619879695173 135-139 0.055630794743332365 140-144 0.06658239168338578 145-149 0.06514246865071098 150 0.07812245545134158 >>END_MODULE >>Sequence Length Distribution pass #Length Count 150 8.8976978E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 87.44509789324798 #Duplication Level Relative count 1 100.0 2 18.79632374740587 3 11.05511084758046 4 8.241921138452415 5 6.769443620911157 6 6.26544124913529 7 5.5802615541720195 8 5.198142108904042 9 5.257436505583556 10++ 491.66254900023057 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position GGGGG 19988445 3.0059526 3.5940325 6 >>END_MODULE