##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename N0061.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 94393488 Filtered Sequences 0 Sequence length 150 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.37973903454018 32.0 32.0 32.0 27.0 32.0 2 30.79644748375015 32.0 32.0 32.0 27.0 32.0 3 30.85424479705634 32.0 32.0 32.0 27.0 32.0 4 30.927369025710757 32.0 32.0 32.0 27.0 32.0 5 30.857203878301437 32.0 32.0 32.0 27.0 32.0 6 35.20417458246696 37.0 37.0 37.0 32.0 37.0 7 35.13218922474822 37.0 37.0 37.0 32.0 37.0 8 35.08982956536154 37.0 37.0 37.0 32.0 37.0 9 35.086597658092685 37.0 37.0 37.0 32.0 37.0 10-14 34.99468665253688 37.0 37.0 37.0 32.0 37.0 15-19 34.921426238640535 37.0 37.0 37.0 32.0 37.0 20-24 34.870228702641015 37.0 37.0 37.0 32.0 37.0 25-29 34.8666218627285 37.0 37.0 37.0 32.0 37.0 30-34 34.815690864183345 37.0 37.0 37.0 32.0 37.0 35-39 34.75284397796594 37.0 37.0 37.0 27.0 37.0 40-44 34.682458609856646 37.0 37.0 37.0 27.0 37.0 45-49 34.615418377166016 37.0 37.0 37.0 27.0 37.0 50-54 34.549483188925066 37.0 37.0 37.0 27.0 37.0 55-59 34.48075467027981 37.0 37.0 37.0 27.0 37.0 60-64 34.40977669773152 37.0 37.0 37.0 27.0 37.0 65-69 34.32836111745336 37.0 37.0 37.0 27.0 37.0 70-74 34.24030622324286 37.0 37.0 37.0 27.0 37.0 75-79 34.17620819987074 37.0 37.0 37.0 27.0 37.0 80-84 34.08042979829287 37.0 37.0 37.0 27.0 37.0 85-89 33.960791594013344 37.0 37.0 37.0 27.0 37.0 90-94 33.82304836748908 37.0 37.0 37.0 27.0 37.0 95-99 33.67599486947659 37.0 34.0 37.0 23.0 37.0 100-104 33.528438023182275 37.0 32.0 37.0 22.0 37.0 105-109 33.368752005434956 37.0 32.0 37.0 22.0 37.0 110-114 33.22709850916834 37.0 32.0 37.0 22.0 37.0 115-119 33.08220717090145 37.0 32.0 37.0 22.0 37.0 120-124 32.970811958977514 37.0 32.0 37.0 22.0 37.0 125-129 32.837802385266244 37.0 32.0 37.0 22.0 37.0 130-134 32.737825507623995 37.0 32.0 37.0 22.0 37.0 135-139 32.65293135475617 37.0 32.0 37.0 22.0 37.0 140-144 32.515511885735165 37.0 32.0 37.0 22.0 37.0 145-149 32.260817693271385 37.0 32.0 37.0 16.6 37.0 150 30.408538044488832 37.0 27.0 37.0 13.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 98.0 5 1324.0 6 2520.0 7 2092.0 8 1837.0 9 1836.0 10 2150.0 11 6965.0 12 17111.0 13 26917.0 14 36869.0 15 49415.0 16 58448.0 17 63504.0 18 74375.0 19 106226.0 20 165698.0 21 253539.0 22 366211.0 23 508737.0 24 676724.0 25 873935.0 26 1100178.0 27 1374442.0 28 1721881.0 29 2181776.0 30 2835654.0 31 3850020.0 32 5624559.0 33 9259907.0 34 1.7937768E7 35 3.3329021E7 36 1.188175E7 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 16.515912184578045 33.436008002582746 24.728058515284058 25.32002129755515 2 22.35107825419041 33.178626168148014 27.526548902866544 16.943746674795037 3 18.8490283741403 31.59861823169307 28.499529361760406 21.05282403240622 4 19.90005532736296 28.983185731353807 29.98534737802651 21.131411563256727 5 21.894670380429723 29.656364389228163 29.516194977794846 18.932770252547268 6 20.709757782440004 29.866299519830562 28.47220980088859 20.95173289684084 7 22.275733477530558 29.620598781743514 29.01426651748987 19.089401223236063 8 20.325989606613984 29.561915769591668 29.897183107887766 20.214911515906582 9 20.393914743517097 28.463786764407917 30.736544592127075 20.40575389994791 10-14 20.89008793687331 29.700483209174994 28.896876650084785 20.51255220386691 15-19 20.785832880325174 29.600324119857373 28.94735924284034 20.666483756977115 20-24 21.013072862137427 29.48426748133913 28.793204956250033 20.7094547002734 25-29 20.99016897354799 29.505654960462323 28.723137656454988 20.7810384095347 30-34 21.073315931033477 29.38331969547359 28.687959248266797 20.855405125226138 35-39 21.11323448655703 29.4014430626513 28.61921730364359 20.866105147148087 40-44 21.131922244707145 29.39966600038189 28.593434775419468 20.874976979491493 45-49 21.109049029319984 29.348298952157155 28.62113228419721 20.921519734325653 50-54 21.128394193166457 29.408023713251154 28.567787724402848 20.895794369179537 55-59 21.117581699268964 29.412481428090842 28.597126573677023 20.87281029896317 60-64 21.097929677250704 29.397097915137564 28.557660290185172 20.947312117426556 65-69 21.181337763163814 29.416244971816198 28.539165629808004 20.86325163521198 70-74 21.100903414633812 29.435591670809423 28.54738154635928 20.916123368197486 75-79 21.083013197160874 29.462320009237015 28.510273420988874 20.94439337261324 80-84 21.12217093495116 29.41135338414825 28.56359472730453 20.90288095359606 85-89 21.09976761081389 29.47563016759857 28.540803046508316 20.883799175079222 90-94 21.107839408266358 29.427212968917203 28.551368968725054 20.91357865409139 95-99 21.100261829716267 29.47054875221103 28.522682133791154 20.90650728428155 100-104 21.089996373167274 29.513832683460883 28.527454887586 20.86871605578584 105-109 21.083366358678163 29.47491323572502 28.50498276184063 20.936737643756185 110-114 21.086874079513926 29.507648627507233 28.50530055197803 20.900176741000813 115-119 21.096028731416425 29.540886327804632 28.512249996384355 20.850834944394588 120-124 21.032101675974328 29.52342202573113 28.53756944046271 20.90690685783183 125-129 21.101635611222864 29.529537435102505 28.522509251118567 20.846317702556064 130-134 21.060259018734214 29.57058366173736 28.512838714911226 20.8563186046172 135-139 21.07556744637963 29.534941768954848 28.49355424663097 20.89593653803455 140-144 21.068127468115062 29.61988389678683 28.453419885785934 20.858568749312177 145-149 21.075064891043066 29.659372970198667 28.483454919347245 20.78210721941102 150 21.088356403354354 29.2120805151242 28.470479336114707 21.229083745406733 >>END_MODULE >>Per base GC content pass #Base %GC 1 41.8359334821332 2 39.29482492898544 3 39.901852406546524 4 41.03146689061969 5 40.827440632976995 6 41.661490679280845 7 41.36513470076662 8 40.540901122520566 9 40.79966864346501 10-14 41.40264014074022 15-19 41.45231663730229 20-24 41.72252756241083 25-29 41.77120738308269 30-34 41.92872105625962 35-39 41.979339633705116 40-44 42.006899224198634 45-49 42.03056876364564 50-54 42.024188562346 55-59 41.990391998232134 60-64 42.04524179467726 65-69 42.0445893983758 70-74 42.017026782831294 75-79 42.027406569774115 80-84 42.025051888547225 85-89 41.98356678589311 90-94 42.021418062357746 95-99 42.00676911399782 100-104 41.95871242895311 105-109 42.020104002434344 110-114 41.98705082051474 115-119 41.94686367581102 120-124 41.93900853380616 125-129 41.94795331377893 130-134 41.916577623351415 135-139 41.971503984414184 140-144 41.926696217427235 145-149 41.85717211045408 150 42.31744014876109 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 174.0 1 295.5 2 599.5 3 951.5 4 1262.5 5 1526.5 6 1783.5 7 2006.0 8 2274.0 9 2697.0 10 3219.5 11 3728.5 12 4120.0 13 4640.5 14 5378.5 15 6185.0 16 7326.0 17 12613.5 18 19206.5 19 30992.5 20 46824.0 21 60860.0 22 101594.5 23 161932.0 24 253269.5 25 365053.0 26 477837.0 27 723286.5 28 1117191.0 29 1434933.0 30 1592097.5 31 1700006.5 32 1840155.0 33 2045019.5 34 2350929.5 35 2635559.5 36 2990317.0 37 3367118.5 38 3715715.0 39 4282116.5 40 4698711.5 41 4833144.5 42 4972167.0 43 5149917.5 44 5322844.0 45 5304253.0 46 5029300.0 47 4752771.5 48 4419581.5 49 3893126.5 50 3312473.5 51 2751345.5 52 2220377.0 53 1755717.5 54 1365311.0 55 1035562.5 56 743690.5 57 485841.5 58 316662.5 59 206524.5 60 125491.0 61 78228.5 62 47391.0 63 27526.0 64 16171.0 65 9475.0 66 6157.0 67 4417.0 68 3181.5 69 2511.5 70 2167.0 71 1923.0 72 1713.5 73 1512.5 74 1444.5 75 1380.0 76 1292.0 77 1223.5 78 1194.5 79 1215.0 80 1215.0 81 1138.0 82 1118.0 83 1153.0 84 1179.0 85 1191.0 86 1230.0 87 1335.5 88 1462.5 89 1599.0 90 1858.5 91 2285.0 92 3021.5 93 4056.5 94 5397.5 95 13945.5 96 22222.5 97 16427.5 98 6587.0 99 2949.5 100 12944.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.08309577457292393 2 0.0605952817423168 3 0.04656147466443872 4 0.027625846393132543 5 0.017985350853863987 6 0.023094813489676323 7 0.008416894182361393 8 0.0042767780760469415 9 0.0035140135938190992 10-14 0.003857469489844469 15-19 0.005503769497319561 20-24 0.010458348567435076 25-29 0.021495762504294788 30-34 0.028882924635648594 35-39 0.03000906164204887 40-44 0.029272782037676158 45-49 0.035953115748832164 50-54 0.031830585601413525 55-59 0.03620991312451554 60-64 0.032895277691189884 65-69 0.02524241926519338 70-74 0.02415484424095018 75-79 0.026815409130765463 80-84 0.03993432258801582 85-89 0.04205798603395183 90-94 0.05349945326736946 95-99 0.04968711400939014 100-104 0.051231712085901514 105-109 0.06022661224257335 110-114 0.06101670911874768 115-119 0.07136318556212266 120-124 0.0634272567616105 125-129 0.07355888787582465 130-134 0.062372099227861987 135-139 0.057843820751702704 140-144 0.06904819535856117 145-149 0.06753792168375004 150 0.08088587636469159 >>END_MODULE >>Sequence Length Distribution pass #Length Count 150 9.4393488E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 89.2418509262326 #Duplication Level Relative count 1 100.0 2 19.392959323298918 3 11.397561885806692 4 8.611145664883692 5 6.854086329145416 6 5.874486876477174 7 5.258738649085707 8 4.770493842517726 9 4.095658664012937 10++ 455.7127752207986 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position GGGGG 20270660 3.5762684 4.259962 6 >>END_MODULE