enum anaModes {mLocal,mPROOF,mGrid};
Int_t binfirst = 0; //where do we start numbering bins
Int_t binlast = 8; //where do we stop numbering bins
const Int_t numberOfCentralityBins = 9;
Float_t centralityArray[numberOfCentralityBins+1] = {0.,5.,10.,20.,30.,40.,50.,60.,70.,80.}; // in centrality percentile
//Int_t centralityArray[numberOfCentralityBins+1] = {41,80,146,245,384,576,835,1203,1471,10000}; // in terms of TPC only reference multiplicity
TString commonOutputFileName = "outputCentrality"; // e.g.: result for centrality bin 0 will be in the file "outputCentrality0.root", etc
void runFlowTaskCentralityKinkTrain( Int_t mode = mLocal,
Bool_t useFlowParFiles = kFALSE,
Bool_t DATA = kTRUE,
const Char_t* dataDir="fileList",
Int_t nEvents = 1e4,
Int_t offset=0 )
{
// Time:
TStopwatch timer;
timer.Start();
// Load needed libraries:
LoadLibraries(mode,useFlowParFiles);
// Create analysis manager:
AliAnalysisManager *mgr = new AliAnalysisManager("FlowAnalysisManager");
// Chains:
if(mode == mLocal)
{
gROOT->LoadMacro("$ALICE_ROOT/PWGUD/macros/CreateESDChain.C");
TChain* chain = CreateESDChain(dataDir, nEvents, offset);
//TChain* chain = CreateAODChain(dataDir, nEvents, offset);
}
// Connect plug-in to the analysis manager:
if(mode == mGrid)
{
gROOT->LoadMacro("CreateAlienHandler.C");
AliAnalysisGrid *alienHandler = CreateAlienHandler(useFlowParFiles);
if(!alienHandler) return;
mgr->SetGridHandler(alienHandler);
}
// Event handlers:
AliVEventHandler* esdH = new AliESDInputHandler;
mgr->SetInputEventHandler(esdH);
if (!DATA)
{
AliMCEventHandler *mc = new AliMCEventHandler();
mgr->SetMCtruthEventHandler(mc);
}
// Task to check the offline trigger:
gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
AddTaskPhysicsSelection(!DATA);
//Add the centrality determination task
gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
AliCentralitySelectionTask* centSelTask = AddTaskCentrality();
if (!DATA) centSelTask->SetMCInput();
//add the PID response task
gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPIDResponse.C");
AliAnalysisTaskPIDResponse* pidresponsetask = AddTaskPIDResponse(!DATA);
//Add the TOF tender
//gROOT->LoadMacro("$ALICE_ROOT/PWGCF/FLOW/macros/AddTaskTenderTOF.C");
//AddTaskTenderTOF();
// Setup kink analysis per centrality bin:
gROOT->LoadMacro("$ALICE_ROOT/PWGCF/FLOW/macros/Kinks/AddTaskFlowCentralityKink.C");
for (Int_t i=binfirst; i<binlast+1; i++)
{
Float_t lowCentralityBinEdge = centralityArray[i];
Float_t highCentralityBinEdge = centralityArray[i+1];
AddTaskFlowCentralityKink( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kUnknown,
AliFlowTrackCuts::kTOFbeta,
-1,2,kTRUE );
AddTaskFlowCentralityKink( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kUnknown,
AliFlowTrackCuts::kTOFbeta,
1,2,kTRUE );
AddTaskFlowCentralityKink( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kUnknown,
AliFlowTrackCuts::kTOFbeta,
-1,3 );
AddTaskFlowCentralityKink( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kUnknown,
AliFlowTrackCuts::kTOFbeta,
1,3 );
} // end of for (Int_t i=0; i<numberOfCentralityBins; i++)
// Setup kaon analysis per centrality bin:
gROOT->LoadMacro("$ALICE_ROOT/PWGCF/FLOW/macros/Kinks/AddTaskFlowCentralityPID.C");
for (Int_t i=binfirst; i<binlast+1; i++)
{
Float_t lowCentralityBinEdge = centralityArray[i];
Float_t highCentralityBinEdge = centralityArray[i+1];
AddTaskFlowCentralityPID( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kKaon,
AliFlowTrackCuts::kTOFbeta,
-1,2,kTRUE );
AddTaskFlowCentralityPID( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kKaon,
AliFlowTrackCuts::kTOFbeta,
1,2,kTRUE );
AddTaskFlowCentralityPID( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kKaon,
AliFlowTrackCuts::kTOFbeta,
-1,3 );
AddTaskFlowCentralityPID( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kKaon,
AliFlowTrackCuts::kTOFbeta,
1,3 );
} // end of for (Int_t i=0; i<numberOfCentralityBins; i++)
// Setup He3 analysis per centrality bin:
gROOT->LoadMacro("$ALICE_ROOT/PWGCF/FLOW/macros/Kinks/AddTaskFlowCentralityPID.C");
for (Int_t i=binfirst; i<binlast+1; i++)
{
Float_t lowCentralityBinEdge = centralityArray[i];
Float_t highCentralityBinEdge = centralityArray[i+1];
AddTaskFlowCentralityPID( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kHe3,
AliFlowTrackCuts::kTPCNuclei,
-1,2,kTRUE );
AddTaskFlowCentralityPID( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kHe3,
AliFlowTrackCuts::kTPCNuclei,
1,2,kTRUE );
AddTaskFlowCentralityPID( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kHe3,
AliFlowTrackCuts::kTPCNuclei,
-1,3 );
AddTaskFlowCentralityPID( lowCentralityBinEdge,
highCentralityBinEdge,
commonOutputFileName,
AliPID::kHe3,
AliFlowTrackCuts::kTPCNuclei,
1,3 );
} // end of for (Int_t i=0; i<numberOfCentralityBins; i++)
// Enable debug printouts:
mgr->SetDebugLevel(2);
// Run the analysis:
if(!mgr->InitAnalysis()) return;
mgr->PrintStatus();
if(mode == mLocal)
{
mgr->StartAnalysis("local",chain);
}
else if(mode == mPROOF)
{
mgr->StartAnalysis("proof",dataDir,nEvents,offset);
}
else if(mode == mGrid)
{
mgr->StartAnalysis("grid");
}
// Print real and CPU time used for analysis:
timer.Stop();
timer.Print();
} // end of void runFlowTaskCentralityPIDTrain(...)
//===============================================================================================
/*
void CrossCheckUserSettings(Bool_t bData)
{
// Check in this method if the user settings make sense.
if(LYZ1SUM && LYZ2SUM) {cout<<" WARNING: You cannot run LYZ1 and LYZ2 at the same time! LYZ2 needs the output from LYZ1 !!!!"<<endl; exit(0); }
if(LYZ1PROD && LYZ2PROD) {cout<<" WARNING: You cannot run LYZ1 and LYZ2 at the same time! LYZ2 needs the output from LYZ1 !!!!"<<endl; exit(0); }
if(LYZ2SUM && LYZEP) {cout<<" WARNING: You cannot run LYZ2 and LYZEP at the same time! LYZEP needs the output from LYZ2 !!!!"<<endl; exit(0); }
if(LYZ1SUM && LYZEP) {cout<<" WARNING: You cannot run LYZ1 and LYZEP at the same time! LYZEP needs the output from LYZ2 !!!!"<<endl; exit(0); }
} // end of void CrossCheckUserSettings()
*/
//===============================================================================================
void LoadLibraries(const anaModes mode, Bool_t useFlowParFiles )
{
//--------------------------------------
// Load the needed libraries most of them already loaded by aliroot
//--------------------------------------
gSystem->Load("libCore");
gSystem->Load("libTree");
gSystem->Load("libGeom");
gSystem->Load("libVMC");
gSystem->Load("libXMLIO");
gSystem->Load("libPhysics");
gSystem->Load("libXMLParser");
gSystem->Load("libProof");
gSystem->Load("libMinuit");
if (mode==mLocal || mode==mGrid)
{
gSystem->Load("libSTEERBase");
gSystem->Load("libCDB");
gSystem->Load("libRAWDatabase");
gSystem->Load("libRAWDatarec");
gSystem->Load("libESD");
gSystem->Load("libAOD");
gSystem->Load("libSTEER");
gSystem->Load("libANALYSIS");
gSystem->Load("libANALYSISalice");
gSystem->Load("libTPCbase");
gSystem->Load("libTOFbase");
gSystem->Load("libTOFrec");
gSystem->Load("libTRDbase");
gSystem->Load("libVZERObase");
gSystem->Load("libVZEROrec");
gSystem->Load("libT0base");
gSystem->Load("libT0rec");
gSystem->Load("libTENDER");
gSystem->Load("libTENDERSupplies");
if (useFlowParFiles)
{
AliAnalysisAlien::SetupPar("PWGflowBase");
AliAnalysisAlien::SetupPar("PWGflowTasks");
}
else
{
gSystem->Load("libPWGflowBase");
gSystem->Load("libPWGflowTasks");
}
}
else if (mode==mPROOF)
{
TList* list = new TList();
list->Add(new TNamed("ALIROOT_MODE", "ALIROOT"));
if (useFlowParFiles)
list->Add(new TNamed("ALIROOT_EXTRA_LIBS", "ANALYSIS:ANALYSISalice:TENDER:TENDERSupplies"));
else
list->Add(new TNamed("ALIROOT_EXTRA_LIBS", "ANALYSIS:ANALYSISalice:TENDER:TENDERSupplies:PWGflowBase:PWGflowTasks"));
//list->Add(new TNamed("ALIROOT_EXTRA_INCLUDES","PWG/FLOW/Base:PWG/FLOW/Tasks"));
// Connect to proof
printf("*** Connect to PROOF ***\n");
gEnv->SetValue("XSec.GSI.DelegProxy","2");
//TProof* proof = TProof::Open("alice-caf.cern.ch");
TProof* proof = TProof::Open("skaf.saske.sk");
// list the data available
//gProof->ShowDataSets("/*/*");
//gProof->ShowDataSets("/alice/sim/"); //for MC Data
//gProof->ShowDataSets("/alice/data/"); //for REAL Data
proof->ClearPackages();
proof->EnablePackage("VO_ALICE@AliRoot::v4-21-14-AN",list);
if (useFlowParFiles)
{
gProof->UploadPackage("PWGflowBase.par");
gProof->UploadPackage("PWGflowTasks.par");
}
// Show enables Packages
gProof->ShowEnabledPackages();
}
} // end of void LoadLibraries(const anaModes mode)
//===============================================================================================
TChain* CreateAODChain(const char* aDataDir, Int_t aRuns, Int_t offset)
{
// creates chain of files in a given directory or file containing a list.
// In case of directory the structure is expected as:
// <aDataDir>/<dir0>/AliAOD.root
// <aDataDir>/<dir1>/AliAOD.root
// ...
if (!aDataDir)
return 0;
Long_t id, size, flags, modtime;
if (gSystem->GetPathInfo(aDataDir, &id, &size, &flags, &modtime))
{
printf("%s not found.\n", aDataDir);
return 0;
}
TChain* chain = new TChain("aodTree");
TChain* chaingAlice = 0;
if (flags & 2)
{
TString execDir(gSystem->pwd());
TSystemDirectory* baseDir = new TSystemDirectory(".", aDataDir);
TList* dirList = baseDir->GetListOfFiles();
Int_t nDirs = dirList->GetEntries();
gSystem->cd(execDir);
Int_t count = 0;
for (Int_t iDir=0; iDir<nDirs; ++iDir)
{
TSystemFile* presentDir = (TSystemFile*) dirList->At(iDir);
if (!presentDir || !presentDir->IsDirectory() || strcmp(presentDir->GetName(), ".") == 0 || strcmp(presentDir->GetName(), "..") == 0)
continue;
if (offset > 0)
{
--offset;
continue;
}
if (count++ == aRuns)
break;
TString presentDirName(aDataDir);
presentDirName += "/";
presentDirName += presentDir->GetName();
chain->Add(presentDirName + "/AliAOD.root/aodTree");
// cerr<<presentDirName<<endl;
}
}
else
{
// Open the input stream
ifstream in;
in.open(aDataDir);
Int_t count = 0;
// Read the input list of files and add them to the chain
TString aodfile;
while(in.good())
{
in >> aodfile;
if (!aodfile.Contains("root")) continue; // protection
if (offset > 0)
{
--offset;
continue;
}
if (count++ == aRuns)
break;
// add aod file
chain->Add(aodfile);
}
in.close();
}
return chain;
} // end of TChain* CreateAODChain(const char* aDataDir, Int_t aRuns, Int_t offset)