#ifndef ALIANALYSISALIEN_H
#define ALIANALYSISALIEN_H
#ifndef ALIANALYSISGRID_H
#include "AliAnalysisGrid.h"
#endif
#ifndef ROOT_TString
#include <TString.h>
#endif
#ifndef ROOT_TMath
#include <TMath.h>
#endif
#ifndef ROOT_TMap
#include <TMap.h>
#endif
class AliAnalysisManager;
class AliAnalysisTaskCfg;
class TGridJDL;
class AliAnalysisAlien : public AliAnalysisGrid {
public:
AliAnalysisAlien();
AliAnalysisAlien(const char *name);
virtual ~AliAnalysisAlien();
AliAnalysisAlien(const AliAnalysisAlien& other);
AliAnalysisAlien& operator=(const AliAnalysisAlien& other);
virtual void AddAdditionalLibrary(const char *name);
virtual void AddIncludePath(const char *path);
virtual void AddRunNumber(Int_t run);
virtual void AddRunNumber(const char *run);
virtual void AddRunList(const char *runList);
virtual void AddDataFile(const char *lfn);
virtual void AddExternalPackage(const char *name);
virtual void SetExecutable(const char *name="analysis.sh") {fExecutable = name;}
const char *GetExecutable() const {return fExecutable;}
virtual void SetExecutableCommand(const char *command="root -b -q") {fExecutableCommand = command;}
const char *GetExecutableCommand() const {return fExecutableCommand;}
virtual void SetArguments(const char *name="") {fArguments = name;}
const char *GetArguments() const {return fArguments;}
virtual void SetExecutableArgs(const char *name="") {fExecutableArgs = name;}
const char *GetExecutableArgs() const {return fExecutableArgs;}
virtual void SetAnalysisMacro(const char *name="myAnalysis.C") {fAnalysisMacro = name;}
const char *GetAnalysisMacro() const {return fAnalysisMacro;}
virtual void SetAnalysisSource(const char *name="myAnalysisClass.cxx") {fAnalysisSource = name;}
const char *GetAnalysisSource() const {return fAnalysisSource;}
virtual void SetValidationScript(const char *name="validation.sh") {fValidationScript = name;}
const char *GetValidationScript() const {return fValidationScript;}
virtual void SetAdditionalLibs(const char *list) {fAdditionalLibs = list;}
const char *GetAdditionalLibs() const {return fAdditionalLibs;}
virtual void SetAdditionalRootLibs(const char *list) {fAdditionalRootLibs = list;}
const char *GetAdditionalRootLibs() const {return fAdditionalRootLibs;}
virtual void SetPrice(Int_t price=1) {fPrice = price;}
Int_t GetPrice() const {return fPrice;}
virtual void SetRunRange(Int_t min, Int_t max) {fRunRange[0] = min; fRunRange[1] = max;}
void GetRunRange(Int_t &min, Int_t &max) {min = fRunRange[0]; max = fRunRange[1];}
virtual void SetJobTag(const char *tag="") {fJobTag = tag;}
const char *GetJobTag() const {return fJobTag;}
virtual void SetNrunsPerMaster(Int_t nruns=1) {fNrunsPerMaster = nruns;}
Int_t GetNrunsPerMaster() const {return fNrunsPerMaster;}
virtual void SetMaxMergeFiles(Int_t nfiles) {fMaxMergeFiles = nfiles;}
Int_t GetMaxMergeFiles() const {return fMaxMergeFiles;}
virtual void SetMaxMergeStages(Int_t nstages) {fMaxMergeStages = nstages;}
Int_t GetMaxMergeStages() const {return fMaxMergeStages;}
virtual void SetSplitMode(const char *type="se") {fSplitMode = type;}
const char *GetSplitMode() const {return fSplitMode;}
virtual void SetSplitMaxInputFileNumber(Int_t nfiles=100) {fSplitMaxInputFileNumber = nfiles;}
Int_t GetSplitMaxInputFileNumber() const {return fSplitMaxInputFileNumber;}
virtual void SetAPIVersion(const char *version) {fAPIVersion = version;}
const char *GetAPIVersion() const {return fAPIVersion;}
virtual void SetROOTVersion(const char *version) {fROOTVersion = version;}
const char *GetROOTVersion() const {return fROOTVersion;}
virtual void SetAliROOTVersion(const char *version) {fAliROOTVersion=version;}
const char *GetAliROOTVersion() const {return fAliROOTVersion;}
virtual void SetUser(const char *user) {fUser = user;}
const char *GetUser() const {return fUser;}
virtual void SetTTL(Int_t ttl=30000) {fTTL = ttl;}
Int_t GetTTL() const {return fTTL;}
virtual void SetGridWorkingDir(const char *name="workdir") {fGridWorkingDir = name;}
const char *GetGridWorkingDir() const {return fGridWorkingDir;}
virtual void SetGridDataDir(const char *name) {fGridDataDir = name;}
const char *GetGridDataDir() const {return fGridDataDir;}
void SetGeneratorLibs(const char *libs) {fGeneratorLibs = libs;}
const char *GetGeneratorLibs() const {return fGeneratorLibs;}
virtual void SetDataPattern(const char *pattern="*AliESDs.root") {fDataPattern = pattern;}
const char *GetDataPattern() const {return fDataPattern;}
virtual void SetFriendChainName(const char *name="", const char *libnames="");
const char *GetFriendChainName() const {return fFriendChainName;}
virtual void SetDefaultOutputs(Bool_t flag);
virtual void SetGridOutputDir(const char *name="output") {fGridOutputDir = name;}
const char *GetGridOutputDir() const {return fGridOutputDir;}
virtual void SetOutputArchive(const char *list="log_archive.zip:std*@disk=1 root_archive.zip:*.root@disk=2");
const char *GetOutputArchive() const {return fOutputArchive;}
virtual void SetOutputFiles(const char *list);
const char *GetOutputFiles() const {return fOutputFiles;}
virtual void SetOutputToRunNo(Int_t mode=1) {fOutputToRunNo = mode;}
Int_t GetOutputToRunNoMode() const {return fOutputToRunNo;}
virtual void SetInputFormat(const char *format="xml-single") {fInputFormat = format;}
const char *GetInputFormat() const {return fInputFormat;}
virtual void SetMaxInitFailed(Int_t nfail=5) {fMaxInitFailed = nfail;}
Int_t GetMaxInitFailed() const {return fMaxInitFailed;}
virtual void SetTerminateFiles(const char *list) {fTerminateFiles = list;}
const char *GetTerminateFiles() const {return fTerminateFiles;}
virtual void SetMergeExcludes(const char *list) {fMergeExcludes = list; fMergeExcludes.ReplaceAll(",", " "); }
const char *GetMergeExcludes() const {return fMergeExcludes;}
virtual void SetMergeViaJDL(Bool_t on=kTRUE) {fMergeViaJDL = on ? 1 : 0;}
Bool_t IsMergeViaJDL() const {return fMergeViaJDL;}
virtual void SetMergeDirName(const char *name) {fMergeDirName = name;}
const char *GetMergeDirName() const {return fMergeDirName;}
virtual void SetMasterResubmitThreshold(Int_t percentage) {fMasterResubmitThreshold = percentage;}
Int_t GetMasterResubmitThreshold() const {return fMasterResubmitThreshold;}
void SetMCLoop(Bool_t flag=kTRUE) {fMCLoop = flag;}
virtual void SetNtestFiles(Int_t nfiles) {fNtestFiles = nfiles;}
Int_t GetNtestFiles() const {return fNtestFiles;}
virtual void SetNumberOfReplicas(Int_t ncopies) {fNreplicas = TMath::Min(ncopies,4);}
Int_t GetNumberOfReplicas() const {return fNreplicas;}
virtual void SetJDLName(const char *name="analysis.jdl") {fJDLName = name;}
const char *GetJDLName() const {return fJDLName;}
virtual void SetProductionMode(Int_t mode=1) {fProductionMode = mode;}
Int_t GetProductionMode() const {return fProductionMode;}
virtual void SetRegisterExcludes(const char *list) {fRegisterExcludes = list; fRegisterExcludes.ReplaceAll(",", " "); }
const char *GetRegisterExcludes() const {return fRegisterExcludes;}
virtual void SetRunPrefix(const char *prefix);
const char *GetRunPrefix() const {return fRunPrefix;}
virtual void SetOutputSingleFolder(const char *folder) {fOutputSingle = folder; fSplitMode="file"; fSplitMaxInputFileNumber=1;}
const char *GetOutputSingleFolder() const {return fOutputSingle;}
virtual void SetFastReadOption(Bool_t on=kTRUE) {fFastReadOption = on ? 1 : 0;}
Bool_t IsFastReadOption() const {return fFastReadOption;}
virtual void SetOverwriteMode(Bool_t on=kTRUE) {fOverwriteMode = on ? 1 : 0;}
Bool_t IsOverwriteMode() const {return fOverwriteMode;}
virtual void SetDropToShell(Bool_t drop=true) {fDropToShell = drop;}
Bool_t IsDropToShell() const {return fDropToShell;}
virtual void SetTreeName(const char *name) {fTreeName = name;}
const char *GetTreeName() const {return fTreeName;}
TGridJDL *GetGridJDL() const {return fGridJDL;}
TGridJDL *GetMergingJDL() const {return fMergingJDL;}
Int_t GetNMCevents() const {return fNMCevents;}
Int_t GetNMCjobs() const {return fNMCjobs;}
void SetNMCevents(Int_t nevents) {fNMCevents = nevents;}
void SetNMCjobs(Int_t njobs) {fNMCjobs = njobs;}
void AddModule(AliAnalysisTaskCfg *module);
void AddModules(TObjArray *list);
AliAnalysisManager *CreateAnalysisManager(const char *name, const char *filename="");
Int_t GetNmodules() const;
AliAnalysisTaskCfg *GetModule(const char *name);
Bool_t LoadModules();
Bool_t LoadFriendLibs() const;
Bool_t GenerateTest(const char *name, const char *modname="");
Bool_t GenerateTrain(const char *name);
virtual Bool_t CreateDataset(const char *pattern);
Int_t CopyLocalDataset(const char *griddir, const char *pattern, Int_t nfiles, const char *output="data.txt", const char *archivefile="", const char *outputdir="data");
virtual Bool_t CreateJDL();
virtual void EnablePackage(const char *package);
static Bool_t DirectoryExists(const char *lfn);
static Bool_t FileExists(const char *lfn);
static const char *GetJobStatus(Int_t jobidstart, Int_t lastid, Int_t &nrunning, Int_t &nwaiting, Int_t &nerror, Int_t &ndone);
const char *GetListOfFiles(const char *type);
Bool_t CheckMergedFiles(const char *filename, const char *aliendir, Int_t nperchunk, const char *jdl="");
static AliAnalysisManager *LoadAnalysisManager(const char *fname);
static Bool_t MergeInfo(const char *output, const char *collection);
static Bool_t MergeOutput(const char *output, const char *basedir, Int_t nmaxmerge, Int_t stage=0);
virtual Bool_t MergeOutputs();
virtual void Print(Option_t *option="") const;
static Long64_t RunMacroAndExtractLibs(const char* macro, const char *args, TString &libs);
virtual Bool_t StartAnalysis(Long64_t nentries=123456789, Long64_t firstentry=0);
static Bool_t SetupPar(const char *package);
virtual Bool_t Submit();
virtual Bool_t SubmitMerging();
static Int_t SubmitSingleJob(const char *query);
virtual void WriteAnalysisFile();
virtual void WriteAnalysisMacro();
virtual void WriteMergingMacro();
virtual void WriteMergeExecutable();
virtual void WriteExecutable();
virtual Bool_t WriteJDL(Bool_t copy);
virtual void WriteProductionFile(const char *filename) const;
virtual void WriteValidationScript(Bool_t merge=kFALSE);
virtual void SetProofCluster(const char *cluster) {fProofCluster = cluster;}
virtual void SetProofDataSet(const char *dataset) {fProofDataSet = dataset;}
virtual const char *GetProofDataSet() const {return fProofDataSet;}
virtual void SetProofParameter(const char *pname, const char *value);
const char *GetProofParameter(const char *pname) const;
virtual void SetProofReset(Int_t mode) {fProofReset = mode;}
virtual void SetNproofWorkers(Int_t nworkers) {fNproofWorkers = nworkers;}
virtual void SetNproofWorkersPerSlave(Int_t nworkers) {fNproofWorkersPerSlave = nworkers;}
virtual void SetRootVersionForProof(const char *version);
virtual void SetAliRootMode(const char *mode) {fAliRootMode = mode;}
virtual void SetProofProcessOpt(const char *proofOpt="") {fProofProcessOpt = proofOpt;}
virtual TString GetProofProcessOpt() {return fProofProcessOpt;}
virtual void SetFileForTestMode(const char *filename) {fFileForTestMode = filename;}
const char *GetFileForTestMode() const {return fFileForTestMode;}
virtual TChain *GetChainForTestMode(const char *treeName) const;
virtual const TString& GetGridJobIDs() const { return fGridJobIDs; }
virtual const TString& GetGridStages() const { return fGridStages; }
protected:
void CdWork();
Bool_t CheckInputData();
void CheckDataType(const char *lfn, Bool_t &is_collection, Bool_t &is_xml, Bool_t &use_tags);
virtual Bool_t Connect();
virtual void SetDefaults();
Bool_t SubmitNext();
Bool_t IsCollection(const char *lfn) const;
Bool_t IsMCLoop() const {return fMCLoop;}
virtual Bool_t IsSingleOutput() const;
Bool_t IsUsingTags() const {return TObject::TestBit(AliAnalysisGrid::kUseTags);}
Bool_t LoadModule(AliAnalysisTaskCfg *mod);
Bool_t CheckDependencies();
Bool_t CheckFileCopy(const char *alienpath);
private:
TGridJDL *fGridJDL;
TGridJDL *fMergingJDL;
Int_t fPrice;
Int_t fTTL;
Int_t fSplitMaxInputFileNumber;
Int_t fMaxInitFailed;
Int_t fMasterResubmitThreshold;
Int_t fNtestFiles;
Int_t fRunRange[2];
Int_t fNrunsPerMaster;
Int_t fMaxMergeFiles;
Int_t fMaxMergeStages;
Int_t fNsubmitted;
Int_t fProductionMode;
Int_t fOutputToRunNo;
Int_t fMergeViaJDL;
Int_t fFastReadOption;
Int_t fOverwriteMode;
Int_t fNreplicas;
Int_t fNproofWorkers;
Int_t fNproofWorkersPerSlave;
Int_t fProofReset;
Int_t fNMCevents;
Int_t fNMCjobs;
TString fRunNumbers;
TString fExecutable;
TString fExecutableCommand;
TString fArguments;
TString fExecutableArgs;
TString fAnalysisMacro;
TString fAnalysisSource;
TString fValidationScript;
TString fAdditionalRootLibs;
TString fAdditionalLibs;
TString fGeneratorLibs;
TString fSplitMode;
TString fAPIVersion;
TString fROOTVersion;
TString fAliROOTVersion;
TString fExternalPackages;
TString fUser;
TString fGridWorkingDir;
TString fGridDataDir;
TString fDataPattern;
TString fGridOutputDir;
TString fOutputArchive;
TString fOutputFiles;
TString fInputFormat;
TString fDatasetName;
TString fJDLName;
TString fTerminateFiles;
TString fMergeExcludes;
TString fRegisterExcludes;
TString fIncludePath;
TString fCloseSE;
TString fFriendChainName;
TString fJobTag;
TString fOutputSingle;
TString fRunPrefix;
TString fProofCluster;
TString fProofDataSet;
TString fFileForTestMode;
TString fAliRootMode;
TString fProofProcessOpt;
TString fMergeDirName;
TObjArray *fInputFiles;
TObjArray *fPackages;
TObjArray *fModules;
TMap fProofParam;
Bool_t fDropToShell;
Bool_t fMCLoop;
TString fGridJobIDs;
TString fGridStages;
TString fFriendLibs;
TString fTreeName;
ClassDef(AliAnalysisAlien, 26)
};
#endif