MDRP_REDUCE2D: Log file mgDiag2d-8137-56983.log opened Fri Mar 11 13:23:51 2016 MDRP_REDUCE2D: IDL version: x86_64 linux unix linux 7.1.1 Aug 21 2009 64 64 MDRP_REDUCE2D: UNAME: Linux kp115 2.6.32-504.30.3.el6.x86_64 #1 SMP Wed Jul 15 10:13:09 UTC 2015 x86_64 x86_64 x86_64 GNU/Linux MDRP_REDUCE2D: DISPLAY= MDRP_REDUCE2D: mangadrp version v1_5_4 MDRP_REDUCE2D: mangacore version v1_2_3 MDRP_REDUCE2D: idlutils version v5_5_23 MDRP_REDUCE2D: specflat version v1_26 MDRP_REDUCE2D: Plan file mgPlan2d-8137-56983.par MDRP_REDUCE2D: DOCAMS = b1 r1 b2 r2 MDRP_REDUCE2D: Begin plate 8137 at Fri Mar 11 13:23:52 2016 MDRP_REDUCE2D: Slitmap file = slitmap-8137-56983-50.par ML_READSLITMAP: b1: Reading slitmap from /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/slitmaps/0081XX/8137/slitmap-8137-56983-50.par MDRP_REDUCE: b1: STARTING CALIBRATION--------------- MDRP_CALIB: b1: LOOP THROUGH FLATS----------------------------- MDRP_CALIB: b1: Tracing flat # 1 of 1 MDRP_CALIB: b1: Reading flat sdR-b1-00189569.fit SDSSPROC: b1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b1: Selecting op file boss_pixbias-56859-b1.fits.gz SDSSPROC: b1: Read noise = 2.05108 1.96086 1.91128 1.87850 electrons FINDOPFILE: b1: Selecting op file pixflatave-55056-b1.fits.gz SDSSPROC: b1: Correcting with pixel flat pixflatave-55056-b1.fits.gz FINDOPFILE: b1: Selecting op file badpixels-56149-b1.fits.gz SDSSPROC: b1: Correcting with badpixels badpixels-56149-b1.fits.gz MDRP_CALIB: b1: Tracing fibers in sdR-b1-00189569.fit ML_MATCHMJD: b1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-01-56835.par MDRP_CCTRACEFIBERS: b1: Total Fibers: 709 MDRP_CCPEAKS: b1: Traces scaled by 0.999001 MDRP_CCPEAKS: b1: Traces shifted by 1.50000 ccd units MDRP_CCPEAKS: b1: Trace correlation = 0.978090 MDRP_CCPEAKS: b1: THIS PASS: MDRP_CCPEAKS: b1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCPEAKS: b1: Number of peaks Found: 706 MDRP_CCPEAKS: b1: Number of Missing Fibers: 3 MDRP_CCPEAKS: b1: Number of missing edge fibers: 3 MDRP_CCPEAKS: b1: Number of missing interior fibers: 0 MDRP_CCTRACEFIBERS: b1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCTRACEFIBERS: b1: TOTAL MISSING FIBERS: 3 MDRP_CCTRACEFIBERS: b1: MISSING FIBERS (1-indexed): 55 87 125 MDRP_CCTRACEFIBERS: b1: MISSING PEAKS 569 724 893 MDRP_CCTRACEFIBERS: b1: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: b1: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: b1: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: b1: Warning: Fixing traces: 54 86 124 MDRP_CCTRACEFIBERS: b1: Fiber 54 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 86 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 124 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: b1: Fitting traces in sdR-b1-00189569.fit XY2TRACESET: b1: Total rejected = 499968 MDRP_CALIB: b1: Extracting flat with proftype= 1 EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_IMAGE: b1: masked 5 pixels MDRP_FITFLATWIDTH: b1: Median spatial widths = 0.91 0.99 1.02 1.04 pix (LL UL LR UR) ML_CCTWEAK: b1: Cross-correlating peaks up/down detector XY2TRACESET: b1: Total rejected = 470734 EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_IMAGE: b1: masked 7 pixels MDRP_FITFLATWIDTH: b1: Median spatial widths = 0.91 0.99 1.02 1.04 pix (LL UL LR UR) MDRP_CALIB: b1: Using proftype= 1 MDRP_CALIB: b1: Found 0 bright pixels in extracted flat sdR-b1-00189569.fit MDRP_CALIB: b1: GOOD FLAT!, sdR-b1-00189569.fit MDRP_CALIB: b1: LOOP THROUGH ARCS------------------------- MDRP_CALIB: b1: Extracting arc # 1 of 1 MDRP_CALIB: b1: Reading arc sdR-b1-00189570.fit SDSSPROC: b1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b1: Selecting op file boss_pixbias-56859-b1.fits.gz SDSSPROC: b1: Read noise = 2.01483 1.92560 1.88839 1.85676 electrons FINDOPFILE: b1: Selecting op file pixflatave-55056-b1.fits.gz SDSSPROC: b1: Correcting with pixel flat pixflatave-55056-b1.fits.gz FINDOPFILE: b1: Selecting op file badpixels-56149-b1.fits.gz SDSSPROC: b1: Correcting with badpixels badpixels-56149-b1.fits.gz MDRP_CALIB: b1: Fraction of bad pixels in arc = 3.12894e-05 MDRP_CALIB: b1: Arc sdR-b1-00189570.fit paired with flat sdR-b1-00189569.fit MDRP_MATCH_TRACE: b1: Iteration: 0 Pixels Rejected: 35153 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 1 Pixels Rejected: 510 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 2 Pixels Rejected: 138 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 3 Pixels Rejected: 43 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 4 Pixels Rejected: 10 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 5 Pixels Rejected: 0 Finished? 1 MDRP_MATCH_TRACE: b1: Warning: Large number of pixels rejected! 35854 MDRP_CALIB: b1: Shifting traces with match_trace 0.0544434 MDRP_CALIB: b1: Extracting arc EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_IMAGE: b1: masked 28 pixels MDRP_CALIB: b1: Searching for initial wavelength solution MDRP_FITARCIMAGE: b1: Setting ncoeff= 5 MDRP_FITARCIMAGE: b1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: b1: Combining rows 352 to 356 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67872 0.20350 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67882 0.20320 -0.02426 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.738392 MDRP_FITARCIMAGE: b1: Best correlation = 0.738392 MDRP_FITARCIMAGE: b1: ASET = 3.67882 0.20320 -0.02426 0.00120 MDRP_CALIB: b1: Searching for wavelength solution MDRP_FITARCIMAGE: b1: Setting ncoeff= 6 MDRP_FITARCIMAGE: b1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68054 0.20126 -0.02409 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 153 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68054 0.20126 -0.02421 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.796782 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68035 0.20133 -0.02398 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 153 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68025 0.20163 -0.02410 0.00126 ARCFIT_GUESS: b1: Initial correlation = 0.787413 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67994 0.20187 -0.02411 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67994 0.20187 -0.02423 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.794092 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67974 0.20234 -0.02406 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67964 0.20211 -0.02418 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.788376 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67934 0.20249 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67934 0.20249 -0.02425 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.789307 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67934 0.20248 -0.02407 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67924 0.20278 -0.02419 0.00128 ARCFIT_GUESS: b1: Initial correlation = 0.786343 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67913 0.20296 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67903 0.20299 -0.02426 0.00126 ARCFIT_GUESS: b1: Initial correlation = 0.787459 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20303 -0.02414 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67893 0.20303 -0.02426 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.787613 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20302 -0.02408 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67883 0.20306 -0.02420 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.784628 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20302 -0.02402 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67883 0.20305 -0.02414 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.779526 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20303 -0.02414 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67883 0.20333 -0.02426 0.00124 ARCFIT_GUESS: b1: Initial correlation = 0.783774 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20302 -0.02408 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67883 0.20332 -0.02420 0.00124 ARCFIT_GUESS: b1: Initial correlation = 0.782377 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20303 -0.02414 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67883 0.20333 -0.02426 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.785837 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67913 0.20295 -0.02401 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67903 0.20298 -0.02414 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.779994 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67913 0.20296 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67913 0.20296 -0.02425 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.786697 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67933 0.20289 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67923 0.20292 -0.02425 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.787637 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67953 0.20282 -0.02412 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67943 0.20285 -0.02425 0.00128 ARCFIT_GUESS: b1: Initial correlation = 0.784539 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67973 0.20235 -0.02412 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67973 0.20261 -0.02424 0.00128 ARCFIT_GUESS: b1: Initial correlation = 0.787393 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68013 0.20220 -0.02398 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68003 0.20223 -0.02411 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.786025 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68034 0.20173 -0.02410 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68024 0.20204 -0.02422 0.00122 ARCFIT_GUESS: b1: Initial correlation = 0.789707 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68073 0.20158 -0.02391 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68063 0.20162 -0.02403 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.784164 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68093 0.20152 -0.02408 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 153 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68093 0.20126 -0.02420 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.788863 XY2TRACESET: b1: Total rejected = 0 MDRP_FITARCIMAGE: b1: Iterating flux-weighted centers MDRP_FITARCIMAGE: b1: Discarding line 2, at 3654.8390 Ang: RMS= 0.73332400 pix MDRP_FITARCIMAGE: b1: Number of arc lines: 44 MDRP_FITARCIMAGE: b1: Iteration 0 XY2TRACESET: b1: Total rejected = 4760 MDRP_FITARCIMAGE: b1: Rejecting line at 5341.0938 Ang MDRP_FITARCIMAGE: b1: Iteration 1 XY2TRACESET: b1: Total rejected = 4722 MDRP_FITARCIMAGE: b1: Rejecting line at 4306.6720 Ang MDRP_FITARCIMAGE: b1: Iteration 2 XY2TRACESET: b1: Total rejected = 4494 MDRP_FITARCIMAGE: b1: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: b1: Iteration 3 XY2TRACESET: b1: Total rejected = 4521 MDRP_FITARCIMAGE: b1: Rejecting line at 4412.9890 Ang MDRP_FITARCIMAGE: b1: Iteration 4 XY2TRACESET: b1: Total rejected = 4566 MDRP_FITARCIMAGE: b1: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: b1: Iteration 5 XY2TRACESET: b1: Total rejected = 4561 MDRP_FITARCIMAGE: b1: Rejecting line at 3983.8390 Ang MDRP_FITARCIMAGE: b1: Iteration 6 XY2TRACESET: b1: Total rejected = 4525 MDRP_FITARCIMAGE: b1: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: b1: Iteration 7 XY2TRACESET: b1: Total rejected = 4542 MDRP_FITARCIMAGE: b1: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: b1: Iteration 8 XY2TRACESET: b1: Total rejected = 4560 MDRP_FITARCIMAGE: b1: Iterations done XY2TRACESET: b1: Total rejected = 4560 XY2TRACESET: b1: Total rejected = 0 XY2TRACESET: b1: Total rejected = 0 XY2TRACESET: b1: Total rejected = 0 MDRP_FITARCIMAGE: b1: Line 0 3610.5080 1.38885e-05 MDRP_FITARCIMAGE: b1: Line 1 3650.1570 1.70502e-05 MDRP_FITARCIMAGE: b1: Line 2 3654.8390 0.00000 Reject-offset MDRP_FITARCIMAGE: b1: Line 3 3983.8390 1.08624e-05 Reject MDRP_FITARCIMAGE: b1: Line 4 4046.5720 1.67525e-06 MDRP_FITARCIMAGE: b1: Line 5 4077.8380 1.56601e-06 MDRP_FITARCIMAGE: b1: Line 6 4306.6720 1.16952e-05 Reject MDRP_FITARCIMAGE: b1: Line 7 4339.2200 7.72692e-06 MDRP_FITARCIMAGE: b1: Line 8 4347.5060 2.85438e-06 MDRP_FITARCIMAGE: b1: Line 9 4358.3370 5.11322e-06 MDRP_FITARCIMAGE: b1: Line 10 4412.9890 1.10471e-05 Reject MDRP_FITARCIMAGE: b1: Line 11 4662.3520 8.20406e-06 MDRP_FITARCIMAGE: b1: Line 12 4678.1490 4.26393e-06 MDRP_FITARCIMAGE: b1: Line 13 4799.9120 3.18822e-06 MDRP_FITARCIMAGE: b1: Line 14 4916.0700 3.41170e-06 MDRP_FITARCIMAGE: b1: Line 15 5085.8220 1.91244e-06 MDRP_FITARCIMAGE: b1: Line 16 5330.7775 7.99915e-06 MDRP_FITARCIMAGE: b1: Line 17 5341.0938 0.00000 Reject-offset MDRP_FITARCIMAGE: b1: Line 18 5400.5616 4.76250e-06 MDRP_FITARCIMAGE: b1: Line 19 5460.7530 2.22889e-06 MDRP_FITARCIMAGE: b1: Line 20 5656.6588 1.00170e-05 Reject MDRP_FITARCIMAGE: b1: Line 21 5675.8600 1.10280e-05 Reject MDRP_FITARCIMAGE: b1: Line 22 5689.8163 1.05748e-05 MDRP_FITARCIMAGE: b1: Line 23 5719.5300 1.08998e-05 Reject MDRP_FITARCIMAGE: b1: Line 24 5769.5980 1.81287e-06 MDRP_FITARCIMAGE: b1: Line 25 5790.6630 1.64261e-06 MDRP_FITARCIMAGE: b1: Line 26 5820.1558 5.13175e-06 MDRP_FITARCIMAGE: b1: Line 27 5852.4880 1.49090e-06 MDRP_FITARCIMAGE: b1: Line 28 5881.8950 1.39155e-06 MDRP_FITARCIMAGE: b1: Line 29 5944.8340 1.19998e-06 MDRP_FITARCIMAGE: b1: Line 30 5965.4710 9.85206e-06 Reject MDRP_FITARCIMAGE: b1: Line 31 6029.9970 1.45460e-06 MDRP_FITARCIMAGE: b1: Line 32 6074.3380 1.21440e-06 MDRP_FITARCIMAGE: b1: Line 33 6096.1630 9.11291e-07 MDRP_FITARCIMAGE: b1: Line 34 6143.0630 7.78169e-07 MDRP_FITARCIMAGE: b1: Line 35 6163.5940 1.06347e-06 MDRP_FITARCIMAGE: b1: Line 36 6217.2810 1.49786e-06 MDRP_FITARCIMAGE: b1: Line 37 6266.4950 1.92778e-06 MDRP_FITARCIMAGE: b1: Line 38 6304.7890 2.57916e-06 MDRP_FITARCIMAGE: b1: Line 39 6334.4280 1.81848e-06 MDRP_FITARCIMAGE: b1: Line 40 6382.9920 1.87342e-06 MDRP_FITARCIMAGE: b1: Line 41 6402.2460 1.66766e-06 MDRP_FITARCIMAGE: b1: Line 42 6438.4700 5.83401e-06 MDRP_FITARCIMAGE: b1: Line 43 6506.5280 7.94328e-06 MDRP_FITARCIMAGE: b1: Line 44 6532.8820 4.12428e-06 XY2TRACESET: b1: Total rejected = 0 MDRP_FITARCIMAGE: b1: Time 106. seconds elapsed MDRP_CALIB: b1: Number of Rejected lamp lines: 2 out of 45 lamp lines EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 12210 pixels XY2TRACESET: b1: Total rejected = 1185 MDRP_FITDISPERSION: b1: Median wavelength widths = 1.03 1.08 1.09 1.12 pix (L B T R) MDRP_CALIB: b1: GOOD ARC!, sdR-b1-00189570.fit MDRP_CALIB: b1: CREATING FIBERFLATS---------------------- MDRP_CALIB: b1: Create fiberflats for flat # 1 of 1 MDRP_CALIB: b1: Flat sdR-b1-00189569.fit paired with arc sdR-b1-00189570.fit EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_ROW: b1: XCEN is not sorted or not separated by greater than 3 pixels. EXTRACT_IMAGE: b1: masked 20 pixels MDRP_SUPERFLAT: b1: Wavelength range = 3472.0572 6570.7162 MDRP_SUPERFLAT: b1: Creating superflat from 705 fibers MDRP_FIBERFLAT: b1: Number of fiberflat points LE 0 = 1060418 ML_QAIFUFLAT: b1: Normalizing to 4th highest value of 1.07062 ML_MATCHMJD: b1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart01/56898 MDRP_CALIB: b1: Writing calibration structure /uufs/chpc.utah.edu/common/home/sdss03/mangawork/manga/spectro/redux/v1_5_4/8137/56983/calibstruct-b1.sav MDRP_CALIB: b1: Elapsed time = 718. seconds MDRP_REDUCE: b1: FINISHED CALIBRATION--------------- MDRP_REDUCE: b1: CALIB KEYWORD SET. SKIPPING SCIENCE AND ONLY REDUCING CALIBRATION FILES! MDRP_REDUCE: Elapsed time = 722. seconds MDRP_REDUCE2D: Error. No science extractions were done. Problem with calibration files for camera b1 MDRP_REDUCE2D: Continuing with next camera ML_READSLITMAP: r1: Reading slitmap from /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/slitmaps/0081XX/8137/slitmap-8137-56983-50.par MDRP_REDUCE: r1: STARTING CALIBRATION--------------- MDRP_CALIB: r1: LOOP THROUGH FLATS----------------------------- MDRP_CALIB: r1: Tracing flat # 1 of 1 MDRP_CALIB: r1: Reading flat sdR-r1-00189569.fit SDSSPROC: r1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r1: Selecting op file boss_pixbias-56859-r1.fits.gz SDSSPROC: r1: Read noise = 3.69169 2.99109 3.21467 3.19311 electrons FINDOPFILE: r1: Selecting op file pixflatave-56859-r1.fits.gz SDSSPROC: r1: Correcting with pixel flat pixflatave-56859-r1.fits.gz FINDOPFILE: r1: Selecting op file badpixels-56859-r1.fits.gz SDSSPROC: r1: Correcting with badpixels badpixels-56859-r1.fits.gz MDRP_CALIB: r1: Tracing fibers in sdR-r1-00189569.fit ML_MATCHMJD: r1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-01-56835.par MDRP_CCTRACEFIBERS: r1: Total Fibers: 709 MDRP_CCPEAKS: r1: Traces scaled by 0.999001 MDRP_CCPEAKS: r1: Traces shifted by 1.00000 ccd units MDRP_CCPEAKS: r1: Trace correlation = 0.97537846 MDRP_CCPEAKS: r1: THIS PASS: MDRP_CCPEAKS: r1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCPEAKS: r1: Number of peaks Found: 701 MDRP_CCPEAKS: r1: Number of Missing Fibers: 8 MDRP_CCPEAKS: r1: Number of missing edge fibers: 3 MDRP_CCPEAKS: r1: Number of missing interior fibers: 5 MDRP_CCTRACEFIBERS: r1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCTRACEFIBERS: r1: TOTAL MISSING FIBERS: 8 MDRP_CCTRACEFIBERS: r1: MISSING FIBERS (1-indexed): 55 87 125 206 230 231 545 563 MDRP_CCTRACEFIBERS: r1: MISSING PEAKS 564 720 890 1304 1423 1427 2942 3036 MDRP_CCTRACEFIBERS: r1: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: r1: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: r1: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: r1: Warning: Fixing traces: 54 86 124 205 229 230 544 562 MDRP_CCTRACEFIBERS: r1: Fiber 54 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 86 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 124 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 205 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 229 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 230 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 544 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 562 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: r1: Fitting traces in sdR-r1-00189569.fit XY2TRACESET: r1: Total rejected = 78704 MDRP_CALIB: r1: Extracting flat with proftype= 1 EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 96 pixels MDRP_FITFLATWIDTH: r1: Median spatial widths = 1.05 0.99 1.15 1.10 pix (LL UL LR UR) ML_CCTWEAK: r1: Cross-correlating peaks up/down detector XY2TRACESET: r1: Total rejected = 55904 EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 94 pixels MDRP_FITFLATWIDTH: r1: Median spatial widths = 1.05 0.99 1.15 1.10 pix (LL UL LR UR) MDRP_CALIB: r1: Using proftype= 1 MDRP_CALIB: r1: Found 0 bright pixels in extracted flat sdR-r1-00189569.fit MDRP_CALIB: r1: GOOD FLAT!, sdR-r1-00189569.fit MDRP_CALIB: r1: LOOP THROUGH ARCS------------------------- MDRP_CALIB: r1: Extracting arc # 1 of 1 MDRP_CALIB: r1: Reading arc sdR-r1-00189570.fit SDSSPROC: r1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r1: Selecting op file boss_pixbias-56859-r1.fits.gz SDSSPROC: r1: Read noise = 3.69018 2.98507 3.22396 3.20143 electrons FINDOPFILE: r1: Selecting op file pixflatave-56859-r1.fits.gz SDSSPROC: r1: Correcting with pixel flat pixflatave-56859-r1.fits.gz FINDOPFILE: r1: Selecting op file badpixels-56859-r1.fits.gz SDSSPROC: r1: Correcting with badpixels badpixels-56859-r1.fits.gz MDRP_CALIB: r1: Fraction of bad pixels in arc = 0.000356836 MDRP_CALIB: r1: Arc sdR-r1-00189570.fit paired with flat sdR-r1-00189569.fit MDRP_MATCH_TRACE: r1: Iteration: 0 Pixels Rejected: 70252 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 1 Pixels Rejected: 1380 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 2 Pixels Rejected: 507 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 3 Pixels Rejected: 166 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 4 Pixels Rejected: 74 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 5 Pixels Rejected: 32 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 6 Pixels Rejected: 15 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 7 Pixels Rejected: 7 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 8 Pixels Rejected: 6 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 9 Pixels Rejected: 7 Finished? 0 MDRP_MATCH_TRACE: r1: Warning: Large number of pixels rejected! 72446 MDRP_CALIB: r1: Shifting traces with match_trace 0.0556641 MDRP_CALIB: r1: Extracting arc EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 110 pixels MDRP_CALIB: r1: Setting 2-phase readout flag MDRP_CALIB: r1: Searching for initial wavelength solution MDRP_FITARCIMAGE: r1: Setting ncoeff= 5 MDRP_FITARCIMAGE: r1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: r1: Combining rows 352 to 356 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16585 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89335 0.16585 -0.01891 0.00119 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.776265 MDRP_FITARCIMAGE: r1: Best correlation = 0.776265 MDRP_FITARCIMAGE: r1: ASET = 3.89335 0.16585 -0.01891 0.00119 -0.00001 -0.00002 MDRP_CALIB: r1: Searching for wavelength solution MDRP_FITARCIMAGE: r1: Setting ncoeff= 6 MDRP_FITARCIMAGE: r1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89510 0.16325 -0.01867 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r1: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89518 0.16349 -0.01855 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.771580 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89478 0.16376 -0.01874 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89486 0.16373 -0.01862 0.00114 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.775502 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89463 0.16422 -0.01857 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89455 0.16424 -0.01869 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.773242 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89415 0.16437 -0.01882 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89423 0.16461 -0.01876 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.773269 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89399 0.16483 -0.01877 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89399 0.16483 -0.01877 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.770389 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89383 0.16528 -0.01883 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89375 0.16504 -0.01890 0.00121 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.772774 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89367 0.16534 -0.01878 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89359 0.16537 -0.01890 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.772290 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89351 0.16539 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89343 0.16542 -0.01897 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.770931 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16545 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89335 0.16571 -0.01897 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.771532 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16585 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16561 -0.01897 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769951 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16585 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89335 0.16585 -0.01897 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769887 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16585 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89335 0.16585 -0.01897 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769717 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16585 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89343 0.16582 -0.01891 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768850 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89351 0.16579 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89343 0.16555 -0.01897 0.00119 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769778 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89351 0.16539 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89359 0.16563 -0.01896 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.770375 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89383 0.16528 -0.01883 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89375 0.16531 -0.01896 0.00121 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.772844 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89399 0.16523 -0.01883 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89399 0.16523 -0.01883 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.771801 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89415 0.16477 -0.01882 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89423 0.16475 -0.01882 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.773077 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89447 0.16466 -0.01881 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89455 0.16464 -0.01869 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.774160 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89479 0.16416 -0.01868 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89479 0.16416 -0.01868 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.771994 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89511 0.16405 -0.01873 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89519 0.16402 -0.01861 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.773645 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89542 0.16354 -0.01866 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89550 0.16351 -0.01854 0.00120 -0.00002 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.781183 XY2TRACESET: r1: Total rejected = 0 MDRP_FITARCIMAGE: r1: Iterating flux-weighted centers MDRP_FITARCIMAGE: r1: Discarding line 61, at 9657.7860 Ang: RMS= 1.2759092 pix MDRP_FITARCIMAGE: r1: Discarding line 63, at 9784.5030 Ang: RMS= 0.31508923 pix MDRP_FITARCIMAGE: r1: Number of arc lines: 63 MDRP_FITARCIMAGE: r1: Iteration 0 XY2TRACESET: r1: Total rejected = 7015 MDRP_FITARCIMAGE: r1: Rejecting line at 5400.5616 Ang MDRP_FITARCIMAGE: r1: Iteration 1 XY2TRACESET: r1: Total rejected = 6949 MDRP_FITARCIMAGE: r1: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: r1: Iteration 2 XY2TRACESET: r1: Total rejected = 6886 MDRP_FITARCIMAGE: r1: Rejecting line at 5689.8163 Ang MDRP_FITARCIMAGE: r1: Iteration 3 XY2TRACESET: r1: Total rejected = 6813 MDRP_FITARCIMAGE: r1: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: r1: Iteration 4 XY2TRACESET: r1: Total rejected = 6695 MDRP_FITARCIMAGE: r1: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: r1: Iteration 5 XY2TRACESET: r1: Total rejected = 6626 MDRP_FITARCIMAGE: r1: Rejecting line at 5820.1558 Ang MDRP_FITARCIMAGE: r1: Iteration 6 XY2TRACESET: r1: Total rejected = 6591 MDRP_FITARCIMAGE: r1: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: r1: Iteration 7 XY2TRACESET: r1: Total rejected = 6564 MDRP_FITARCIMAGE: r1: Iterations done XY2TRACESET: r1: Total rejected = 6445 XY2TRACESET: r1: Total rejected = 0 XY2TRACESET: r1: Total rejected = 0 XY2TRACESET: r1: Total rejected = 0 MDRP_FITARCIMAGE: r1: Line 0 5400.5616 1.04270e-05 Reject MDRP_FITARCIMAGE: r1: Line 1 5460.7530 5.46059e-06 MDRP_FITARCIMAGE: r1: Line 2 5656.6588 1.14507e-05 Reject MDRP_FITARCIMAGE: r1: Line 3 5675.8600 1.12393e-05 Reject MDRP_FITARCIMAGE: r1: Line 4 5689.8163 1.19391e-05 Reject MDRP_FITARCIMAGE: r1: Line 5 5719.5300 1.23743e-05 Reject MDRP_FITARCIMAGE: r1: Line 6 5769.5980 3.27642e-06 MDRP_FITARCIMAGE: r1: Line 7 5790.6630 2.55512e-06 MDRP_FITARCIMAGE: r1: Line 8 5820.1558 1.14531e-05 Reject MDRP_FITARCIMAGE: r1: Line 9 5852.4880 1.89759e-06 MDRP_FITARCIMAGE: r1: Line 10 5881.8950 1.85591e-06 MDRP_FITARCIMAGE: r1: Line 11 5944.8340 1.68760e-06 MDRP_FITARCIMAGE: r1: Line 12 5965.4710 1.09729e-05 Reject MDRP_FITARCIMAGE: r1: Line 13 6029.9970 2.15097e-06 MDRP_FITARCIMAGE: r1: Line 14 6074.3380 1.63946e-06 MDRP_FITARCIMAGE: r1: Line 15 6096.1630 1.38079e-06 MDRP_FITARCIMAGE: r1: Line 16 6143.0630 7.31006e-07 MDRP_FITARCIMAGE: r1: Line 17 6163.5940 9.28096e-07 MDRP_FITARCIMAGE: r1: Line 18 6217.2810 1.43298e-06 MDRP_FITARCIMAGE: r1: Line 19 6266.4950 1.13592e-06 MDRP_FITARCIMAGE: r1: Line 20 6304.7890 1.27630e-06 MDRP_FITARCIMAGE: r1: Line 21 6334.4280 1.46921e-06 MDRP_FITARCIMAGE: r1: Line 22 6382.9920 1.74287e-06 MDRP_FITARCIMAGE: r1: Line 23 6402.2460 1.84693e-06 MDRP_FITARCIMAGE: r1: Line 24 6438.4700 1.09762e-06 MDRP_FITARCIMAGE: r1: Line 25 6506.5280 3.38025e-06 MDRP_FITARCIMAGE: r1: Line 26 6532.8820 3.53419e-06 MDRP_FITARCIMAGE: r1: Line 27 6598.9530 3.25127e-06 MDRP_FITARCIMAGE: r1: Line 28 6717.0430 3.71231e-06 MDRP_FITARCIMAGE: r1: Line 29 6929.4670 2.96444e-06 MDRP_FITARCIMAGE: r1: Line 30 7032.4128 2.50281e-06 MDRP_FITARCIMAGE: r1: Line 31 7173.9380 1.47330e-06 MDRP_FITARCIMAGE: r1: Line 32 7245.1670 1.45297e-06 MDRP_FITARCIMAGE: r1: Line 33 7438.9000 3.64444e-06 MDRP_FITARCIMAGE: r1: Line 34 7488.8710 4.64192e-06 MDRP_FITARCIMAGE: r1: Line 35 7503.8691 9.98491e-06 MDRP_FITARCIMAGE: r1: Line 36 7514.6518 9.67408e-06 MDRP_FITARCIMAGE: r1: Line 37 7535.7740 6.13165e-06 MDRP_FITARCIMAGE: r1: Line 38 7635.1060 7.49699e-06 MDRP_FITARCIMAGE: r1: Line 39 8014.7860 1.00535e-05 MDRP_FITARCIMAGE: r1: Line 40 8103.6930 7.25881e-06 MDRP_FITARCIMAGE: r1: Line 41 8300.3260 2.53774e-06 MDRP_FITARCIMAGE: r1: Line 42 8377.6065 7.09753e-06 MDRP_FITARCIMAGE: r1: Line 43 8408.2096 7.54727e-06 MDRP_FITARCIMAGE: r1: Line 44 8495.3598 3.14092e-06 MDRP_FITARCIMAGE: r1: Line 45 8521.4422 9.43495e-06 MDRP_FITARCIMAGE: r1: Line 46 8591.2583 2.39173e-06 MDRP_FITARCIMAGE: r1: Line 47 8634.6470 1.65813e-06 MDRP_FITARCIMAGE: r1: Line 48 8654.3831 2.74570e-06 MDRP_FITARCIMAGE: r1: Line 49 8853.8670 1.64119e-06 MDRP_FITARCIMAGE: r1: Line 50 8919.5007 2.33377e-06 MDRP_FITARCIMAGE: r1: Line 51 9122.9674 7.31807e-06 MDRP_FITARCIMAGE: r1: Line 52 9201.7590 2.24768e-06 MDRP_FITARCIMAGE: r1: Line 53 9300.8530 2.49109e-06 MDRP_FITARCIMAGE: r1: Line 54 9313.1386 6.37466e-06 MDRP_FITARCIMAGE: r1: Line 55 9326.5070 3.22828e-06 MDRP_FITARCIMAGE: r1: Line 56 9425.3790 3.34083e-06 MDRP_FITARCIMAGE: r1: Line 57 9459.2100 4.90580e-06 MDRP_FITARCIMAGE: r1: Line 58 9486.6800 4.84966e-06 MDRP_FITARCIMAGE: r1: Line 59 9534.1630 3.62916e-06 MDRP_FITARCIMAGE: r1: Line 60 9547.4000 5.32535e-06 MDRP_FITARCIMAGE: r1: Line 61 9657.7860 9.29105e-06 Reject-RMS MDRP_FITARCIMAGE: r1: Line 62 9665.4240 2.74515e-06 MDRP_FITARCIMAGE: r1: Line 63 9784.5030 1.10402e-05 Reject-RMS MDRP_FITARCIMAGE: r1: Line 64 10139.750 1.33314e-06 XY2TRACESET: r1: Total rejected = 0 MDRP_FITARCIMAGE: r1: Time 129. seconds elapsed MDRP_CALIB: r1: Number of Rejected lamp lines: 1 out of 45 lamp lines EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 16110 pixels XY2TRACESET: r1: Total rejected = 4734 MDRP_FITDISPERSION: r1: Median wavelength widths = 1.07 1.06 1.08 1.07 pix (L B T R) MDRP_CALIB: r1: GOOD ARC!, sdR-r1-00189570.fit MDRP_CALIB: r1: CREATING FIBERFLATS---------------------- MDRP_CALIB: r1: Create fiberflats for flat # 1 of 1 MDRP_CALIB: r1: Flat sdR-r1-00189569.fit paired with arc sdR-r1-00189570.fit EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 314 pixels MDRP_SUPERFLAT: r1: Wavelength range = 5158.1078 10356.317 MDRP_SUPERFLAT: r1: Creating superflat from 691 fibers MDRP_FIBERFLAT: r1: Number of fiberflat points LE 0 = 728863 ML_QAIFUFLAT: r1: Normalizing to 4th highest value of 1.06158 ML_MATCHMJD: r1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart01/56898 MDRP_CALIB: r1: Writing calibration structure /uufs/chpc.utah.edu/common/home/sdss03/mangawork/manga/spectro/redux/v1_5_4/8137/56983/calibstruct-r1.sav MDRP_CALIB: r1: Elapsed time = 790. seconds MDRP_REDUCE: r1: FINISHED CALIBRATION--------------- MDRP_REDUCE: r1: CALIB KEYWORD SET. SKIPPING SCIENCE AND ONLY REDUCING CALIBRATION FILES! MDRP_REDUCE: Elapsed time = 793. seconds MDRP_REDUCE2D: Error. No science extractions were done. Problem with calibration files for camera r1 MDRP_REDUCE2D: Continuing with next camera ML_READSLITMAP: b2: Reading slitmap from /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/slitmaps/0081XX/8137/slitmap-8137-56983-50.par MDRP_REDUCE: b2: STARTING CALIBRATION--------------- MDRP_CALIB: b2: LOOP THROUGH FLATS----------------------------- MDRP_CALIB: b2: Tracing flat # 1 of 1 MDRP_CALIB: b2: Reading flat sdR-b2-00189569.fit SDSSPROC: b2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b2: Selecting op file boss_pixbias-56859-b2.fits.gz BOLTON_BIASSUB: b2: Doing row-by-row bias for b2 crazy quadrant. SDSSPROC: b2: Read noise = 2.00958 2.18497 2.03666 1.83124 electrons FINDOPFILE: b2: Selecting op file pixflatave-55056-b2.fits.gz SDSSPROC: b2: Correcting with pixel flat pixflatave-55056-b2.fits.gz FINDOPFILE: b2: Selecting op file badpixels-56149-b2.fits.gz SDSSPROC: b2: Correcting with badpixels badpixels-56149-b2.fits.gz MDRP_CALIB: b2: Tracing fibers in sdR-b2-00189569.fit ML_MATCHMJD: b2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-01-56835.par MDRP_CCTRACEFIBERS: b2: Total Fibers: 714 MDRP_CCPEAKS: b2: Traces scaled by 0.998501 MDRP_CCPEAKS: b2: Traces shifted by 3.20000 ccd units MDRP_CCPEAKS: b2: Trace correlation = 0.974090 MDRP_CCPEAKS: b2: THIS PASS: MDRP_CCPEAKS: b2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCPEAKS: b2: Number of peaks Found: 711 MDRP_CCPEAKS: b2: Number of Missing Fibers: 3 MDRP_CCPEAKS: b2: Number of missing edge fibers: 2 MDRP_CCPEAKS: b2: Number of missing interior fibers: 1 MDRP_CCTRACEFIBERS: b2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCTRACEFIBERS: b2: TOTAL MISSING FIBERS: 3 MDRP_CCTRACEFIBERS: b2: MISSING FIBERS (1-indexed): 343 354 714 MDRP_CCTRACEFIBERS: b2: MISSING PEAKS 1966 2014 3764 MDRP_CCTRACEFIBERS: b2: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: b2: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: b2: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: b2: Warning: Fixing traces: 342 353 713 MDRP_CCTRACEFIBERS: b2: Fiber 342 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 353 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 713 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: b2: Fitting traces in sdR-b2-00189569.fit XY2TRACESET: b2: Total rejected = 463330 MDRP_CALIB: b2: Extracting flat with proftype= 1 EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 0 pixels MDRP_FITFLATWIDTH: b2: Median spatial widths = 0.94 0.93 1.01 0.99 pix (LL UL LR UR) ML_CCTWEAK: b2: Cross-correlating peaks up/down detector XY2TRACESET: b2: Total rejected = 350048 EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 0 pixels MDRP_FITFLATWIDTH: b2: Median spatial widths = 0.94 0.93 1.00 0.99 pix (LL UL LR UR) MDRP_CALIB: b2: Using proftype= 1 MDRP_CALIB: b2: Found 0 bright pixels in extracted flat sdR-b2-00189569.fit MDRP_CALIB: b2: GOOD FLAT!, sdR-b2-00189569.fit MDRP_CALIB: b2: LOOP THROUGH ARCS------------------------- MDRP_CALIB: b2: Extracting arc # 1 of 1 MDRP_CALIB: b2: Reading arc sdR-b2-00189570.fit SDSSPROC: b2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b2: Selecting op file boss_pixbias-56859-b2.fits.gz BOLTON_BIASSUB: b2: Doing row-by-row bias for b2 crazy quadrant. SDSSPROC: b2: Read noise = 1.96553 2.10480 2.01024 1.80486 electrons FINDOPFILE: b2: Selecting op file pixflatave-55056-b2.fits.gz SDSSPROC: b2: Correcting with pixel flat pixflatave-55056-b2.fits.gz FINDOPFILE: b2: Selecting op file badpixels-56149-b2.fits.gz SDSSPROC: b2: Correcting with badpixels badpixels-56149-b2.fits.gz MDRP_CALIB: b2: Fraction of bad pixels in arc = 8.49624e-05 MDRP_CALIB: b2: Arc sdR-b2-00189570.fit paired with flat sdR-b2-00189569.fit MDRP_MATCH_TRACE: b2: Iteration: 0 Pixels Rejected: 24450 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 1 Pixels Rejected: 371 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 2 Pixels Rejected: 70 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 3 Pixels Rejected: 16 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 4 Pixels Rejected: 7 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 5 Pixels Rejected: 4 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 6 Pixels Rejected: 2 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 7 Pixels Rejected: 0 Finished? 1 MDRP_MATCH_TRACE: b2: Warning: Large number of pixels rejected! 24920 MDRP_CALIB: b2: Shifting traces with match_trace 0.0705566 MDRP_CALIB: b2: Extracting arc EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 70 pixels MDRP_CALIB: b2: Searching for initial wavelength solution MDRP_FITARCIMAGE: b2: Setting ncoeff= 5 MDRP_FITARCIMAGE: b2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: b2: Combining rows 355 to 359 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68682 0.19982 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68682 0.19982 -0.02402 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.740100 MDRP_FITARCIMAGE: b2: Best correlation = 0.740100 MDRP_FITARCIMAGE: b2: ASET = 3.68682 0.19982 -0.02402 0.00120 MDRP_CALIB: b2: Searching for wavelength solution MDRP_FITARCIMAGE: b2: Setting ncoeff= 6 MDRP_FITARCIMAGE: b2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68933 0.19772 -0.02382 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68933 0.19772 -0.02394 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.790591 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68894 0.19786 -0.02383 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68885 0.19816 -0.02396 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.793866 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68856 0.19840 -0.02384 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68856 0.19840 -0.02384 0.00122 ARCFIT_GUESS: b2: Initial correlation = 0.794221 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68818 0.19893 -0.02386 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68818 0.19867 -0.02398 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.797734 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68799 0.19900 -0.02386 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68789 0.19904 -0.02399 0.00126 ARCFIT_GUESS: b2: Initial correlation = 0.798516 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68779 0.19908 -0.02375 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68770 0.19911 -0.02387 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.797074 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68760 0.19915 -0.02381 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68750 0.19945 -0.02394 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.798501 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68740 0.19921 -0.02388 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68731 0.19952 -0.02400 0.00124 ARCFIT_GUESS: b2: Initial correlation = 0.791818 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68721 0.19968 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68712 0.19972 -0.02401 0.00126 ARCFIT_GUESS: b2: Initial correlation = 0.792095 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68702 0.19975 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68702 0.19975 -0.02401 0.00124 ARCFIT_GUESS: b2: Initial correlation = 0.792453 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68702 0.19975 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68692 0.19979 -0.02402 0.00122 ARCFIT_GUESS: b2: Initial correlation = 0.794471 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68682 0.19982 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68682 0.19982 -0.02402 0.00122 ARCFIT_GUESS: b2: Initial correlation = 0.796688 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68682 0.19982 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68682 0.19982 -0.02402 0.00124 ARCFIT_GUESS: b2: Initial correlation = 0.797653 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68682 0.19982 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68682 0.19982 -0.02402 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.795491 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68682 0.19982 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68692 0.19952 -0.02396 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.794769 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68701 0.19935 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68692 0.19965 -0.02402 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.798776 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68701 0.19935 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68701 0.19935 -0.02401 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.795593 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68721 0.19928 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68721 0.19902 -0.02401 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.795956 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68740 0.19881 -0.02388 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68740 0.19881 -0.02394 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.795741 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68759 0.19874 -0.02387 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68750 0.19878 -0.02400 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.793628 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68778 0.19827 -0.02387 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68778 0.19827 -0.02399 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.794299 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68817 0.19814 -0.02368 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68807 0.19791 -0.02380 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.792284 XY2TRACESET: b2: Total rejected = 0 MDRP_FITARCIMAGE: b2: Iterating flux-weighted centers MDRP_FITARCIMAGE: b2: Discarding line 2, at 3654.8390 Ang: RMS= 0.70976911 pix MDRP_FITARCIMAGE: b2: Number of arc lines: 44 MDRP_FITARCIMAGE: b2: Iteration 0 XY2TRACESET: b2: Total rejected = 4758 MDRP_FITARCIMAGE: b2: Rejecting line at 5341.0938 Ang MDRP_FITARCIMAGE: b2: Iteration 1 XY2TRACESET: b2: Total rejected = 4734 MDRP_FITARCIMAGE: b2: Rejecting line at 4306.6720 Ang MDRP_FITARCIMAGE: b2: Iteration 2 XY2TRACESET: b2: Total rejected = 4540 MDRP_FITARCIMAGE: b2: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: b2: Iteration 3 XY2TRACESET: b2: Total rejected = 4557 MDRP_FITARCIMAGE: b2: Rejecting line at 4412.9890 Ang MDRP_FITARCIMAGE: b2: Iteration 4 XY2TRACESET: b2: Total rejected = 4578 MDRP_FITARCIMAGE: b2: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: b2: Iteration 5 XY2TRACESET: b2: Total rejected = 4575 MDRP_FITARCIMAGE: b2: Rejecting line at 3983.8390 Ang MDRP_FITARCIMAGE: b2: Iteration 6 XY2TRACESET: b2: Total rejected = 4541 MDRP_FITARCIMAGE: b2: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: b2: Iteration 7 XY2TRACESET: b2: Total rejected = 4572 MDRP_FITARCIMAGE: b2: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: b2: Iteration 8 XY2TRACESET: b2: Total rejected = 4605 MDRP_FITARCIMAGE: b2: Iterations done XY2TRACESET: b2: Total rejected = 4605 XY2TRACESET: b2: Total rejected = 0 XY2TRACESET: b2: Total rejected = 0 XY2TRACESET: b2: Total rejected = 0 MDRP_FITARCIMAGE: b2: Line 0 3610.5080 1.35285e-05 MDRP_FITARCIMAGE: b2: Line 1 3650.1570 1.68773e-05 MDRP_FITARCIMAGE: b2: Line 2 3654.8390 0.00000 Reject-offset MDRP_FITARCIMAGE: b2: Line 3 3983.8390 1.04816e-05 Reject MDRP_FITARCIMAGE: b2: Line 4 4046.5720 2.55501e-06 MDRP_FITARCIMAGE: b2: Line 5 4077.8380 1.70910e-06 MDRP_FITARCIMAGE: b2: Line 6 4306.6720 1.11796e-05 Reject MDRP_FITARCIMAGE: b2: Line 7 4339.2200 6.74574e-06 MDRP_FITARCIMAGE: b2: Line 8 4347.5060 2.99136e-06 MDRP_FITARCIMAGE: b2: Line 9 4358.3370 6.24263e-06 MDRP_FITARCIMAGE: b2: Line 10 4412.9890 1.06596e-05 Reject MDRP_FITARCIMAGE: b2: Line 11 4662.3520 7.74001e-06 MDRP_FITARCIMAGE: b2: Line 12 4678.1490 9.27908e-06 MDRP_FITARCIMAGE: b2: Line 13 4799.9120 3.25605e-06 MDRP_FITARCIMAGE: b2: Line 14 4916.0700 3.58139e-06 MDRP_FITARCIMAGE: b2: Line 15 5085.8220 2.04339e-06 MDRP_FITARCIMAGE: b2: Line 16 5330.7775 7.52736e-06 MDRP_FITARCIMAGE: b2: Line 17 5341.0938 0.00000 Reject-offset MDRP_FITARCIMAGE: b2: Line 18 5400.5616 4.57224e-06 MDRP_FITARCIMAGE: b2: Line 19 5460.7530 3.00124e-06 MDRP_FITARCIMAGE: b2: Line 20 5656.6588 9.94250e-06 Reject MDRP_FITARCIMAGE: b2: Line 21 5675.8600 1.07079e-05 Reject MDRP_FITARCIMAGE: b2: Line 22 5689.8163 1.03886e-05 MDRP_FITARCIMAGE: b2: Line 23 5719.5300 1.01335e-05 Reject MDRP_FITARCIMAGE: b2: Line 24 5769.5980 1.58969e-06 MDRP_FITARCIMAGE: b2: Line 25 5790.6630 1.49408e-06 MDRP_FITARCIMAGE: b2: Line 26 5820.1558 4.81948e-06 MDRP_FITARCIMAGE: b2: Line 27 5852.4880 1.35056e-06 MDRP_FITARCIMAGE: b2: Line 28 5881.8950 1.51951e-06 MDRP_FITARCIMAGE: b2: Line 29 5944.8340 1.97527e-06 MDRP_FITARCIMAGE: b2: Line 30 5965.4710 9.08922e-06 Reject MDRP_FITARCIMAGE: b2: Line 31 6029.9970 3.42767e-06 MDRP_FITARCIMAGE: b2: Line 32 6074.3380 3.29906e-06 MDRP_FITARCIMAGE: b2: Line 33 6096.1630 2.69155e-06 MDRP_FITARCIMAGE: b2: Line 34 6143.0630 1.66365e-06 MDRP_FITARCIMAGE: b2: Line 35 6163.5940 1.06610e-06 MDRP_FITARCIMAGE: b2: Line 36 6217.2810 1.26751e-06 MDRP_FITARCIMAGE: b2: Line 37 6266.4950 1.25633e-06 MDRP_FITARCIMAGE: b2: Line 38 6304.7890 2.15786e-06 MDRP_FITARCIMAGE: b2: Line 39 6334.4280 2.15312e-06 MDRP_FITARCIMAGE: b2: Line 40 6382.9920 1.87363e-06 MDRP_FITARCIMAGE: b2: Line 41 6402.2460 1.69407e-06 MDRP_FITARCIMAGE: b2: Line 42 6438.4700 5.24162e-06 MDRP_FITARCIMAGE: b2: Line 43 6506.5280 3.43389e-06 MDRP_FITARCIMAGE: b2: Line 44 6532.8820 5.42244e-06 XY2TRACESET: b2: Total rejected = 0 MDRP_FITARCIMAGE: b2: Time 112. seconds elapsed MDRP_CALIB: b2: Number of Rejected lamp lines: 2 out of 45 lamp lines EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 13526 pixels XY2TRACESET: b2: Total rejected = 1233 MDRP_FITDISPERSION: b2: Median wavelength widths = 1.05 1.05 1.08 1.07 pix (L B T R) MDRP_CALIB: b2: GOOD ARC!, sdR-b2-00189570.fit MDRP_CALIB: b2: CREATING FIBERFLATS---------------------- MDRP_CALIB: b2: Create fiberflats for flat # 1 of 1 MDRP_CALIB: b2: Flat sdR-b2-00189569.fit paired with arc sdR-b2-00189570.fit EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 0 pixels MDRP_SUPERFLAT: b2: Wavelength range = 3557.5128 6662.7321 MDRP_SUPERFLAT: b2: Creating superflat from 705 fibers MDRP_FIBERFLAT: b2: Number of fiberflat points LE 0 = 1097672 ML_QAIFUFLAT: b2: Normalizing to 4th highest value of 1.06209 ML_MATCHMJD: b2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart01/56898 MDRP_CALIB: b2: Writing calibration structure /uufs/chpc.utah.edu/common/home/sdss03/mangawork/manga/spectro/redux/v1_5_4/8137/56983/calibstruct-b2.sav MDRP_CALIB: b2: Elapsed time = 719. seconds MDRP_REDUCE: b2: FINISHED CALIBRATION--------------- MDRP_REDUCE: b2: CALIB KEYWORD SET. SKIPPING SCIENCE AND ONLY REDUCING CALIBRATION FILES! MDRP_REDUCE: Elapsed time = 720. seconds MDRP_REDUCE2D: Error. No science extractions were done. Problem with calibration files for camera b2 MDRP_REDUCE2D: Continuing with next camera ML_READSLITMAP: r2: Reading slitmap from /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/slitmaps/0081XX/8137/slitmap-8137-56983-50.par MDRP_REDUCE: r2: STARTING CALIBRATION--------------- MDRP_CALIB: r2: LOOP THROUGH FLATS----------------------------- MDRP_CALIB: r2: Tracing flat # 1 of 1 MDRP_CALIB: r2: Reading flat sdR-r2-00189569.fit SDSSPROC: r2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r2: Selecting op file boss_pixbias-56859-r2.fits.gz SDSSPROC: r2: Read noise = 2.75209 2.84948 2.73181 2.74599 electrons FINDOPFILE: r2: Selecting op file pixflatave-56859-r2.fits.gz SDSSPROC: r2: Correcting with pixel flat pixflatave-56859-r2.fits.gz FINDOPFILE: r2: Selecting op file badpixels-56859-r2.fits.gz SDSSPROC: r2: Correcting with badpixels badpixels-56859-r2.fits.gz MDRP_CALIB: r2: Tracing fibers in sdR-r2-00189569.fit ML_MATCHMJD: r2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-01-56835.par MDRP_CCTRACEFIBERS: r2: Total Fibers: 714 MDRP_CCPEAKS: r2: Traces scaled by 0.998501 MDRP_CCPEAKS: r2: Traces shifted by 3.00000 ccd units MDRP_CCPEAKS: r2: Trace correlation = 0.97259796 MDRP_CCPEAKS: r2: THIS PASS: MDRP_CCPEAKS: r2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCPEAKS: r2: Number of peaks Found: 708 MDRP_CCPEAKS: r2: Number of Missing Fibers: 6 MDRP_CCPEAKS: r2: Number of missing edge fibers: 2 MDRP_CCPEAKS: r2: Number of missing interior fibers: 4 MDRP_CCTRACEFIBERS: r2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCTRACEFIBERS: r2: TOTAL MISSING FIBERS: 6 MDRP_CCTRACEFIBERS: r2: MISSING FIBERS (1-indexed): 35 36 37 38 39 354 MDRP_CCTRACEFIBERS: r2: MISSING PEAKS 446 450 455 459 464 2012 MDRP_CCTRACEFIBERS: r2: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: r2: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: r2: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: r2: Warning: Fixing traces: 34 35 36 37 38 353 MDRP_CCTRACEFIBERS: r2: Fiber 34 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 35 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 36 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 37 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 38 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 353 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: r2: Fitting traces in sdR-r2-00189569.fit XY2TRACESET: r2: Total rejected = 66962 MDRP_CALIB: r2: Extracting flat with proftype= 1 EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 1493 pixels MDRP_FITFLATWIDTH: r2: Median spatial widths = 0.98 0.99 1.01 1.08 pix (LL UL LR UR) ML_CCTWEAK: r2: Cross-correlating peaks up/down detector XY2TRACESET: r2: Total rejected = 39516 EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 1203 pixels MDRP_FITFLATWIDTH: r2: Median spatial widths = 0.98 0.99 1.01 1.08 pix (LL UL LR UR) MDRP_CALIB: r2: Using proftype= 1 MDRP_CALIB: r2: Found 0 bright pixels in extracted flat sdR-r2-00189569.fit MDRP_CALIB: r2: GOOD FLAT!, sdR-r2-00189569.fit MDRP_CALIB: r2: LOOP THROUGH ARCS------------------------- MDRP_CALIB: r2: Extracting arc # 1 of 1 MDRP_CALIB: r2: Reading arc sdR-r2-00189570.fit SDSSPROC: r2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r2: Selecting op file boss_pixbias-56859-r2.fits.gz SDSSPROC: r2: Read noise = 2.74684 2.84424 2.73590 2.73815 electrons FINDOPFILE: r2: Selecting op file pixflatave-56859-r2.fits.gz SDSSPROC: r2: Correcting with pixel flat pixflatave-56859-r2.fits.gz FINDOPFILE: r2: Selecting op file badpixels-56859-r2.fits.gz SDSSPROC: r2: Correcting with badpixels badpixels-56859-r2.fits.gz MDRP_CALIB: r2: Fraction of bad pixels in arc = 0.000798700 MDRP_CALIB: r2: Arc sdR-r2-00189570.fit paired with flat sdR-r2-00189569.fit MDRP_MATCH_TRACE: r2: Iteration: 0 Pixels Rejected: 44436 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 1 Pixels Rejected: 830 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 2 Pixels Rejected: 304 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 3 Pixels Rejected: 132 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 4 Pixels Rejected: 42 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 5 Pixels Rejected: 11 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 6 Pixels Rejected: 4 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 7 Pixels Rejected: 1 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 8 Pixels Rejected: 1 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 9 Pixels Rejected: 1 Finished? 0 MDRP_MATCH_TRACE: r2: Warning: Large number of pixels rejected! 45762 MDRP_CALIB: r2: Shifting traces with match_trace 0.0859375 MDRP_CALIB: r2: Extracting arc EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 623 pixels MDRP_CALIB: r2: Setting 2-phase readout flag MDRP_CALIB: r2: Searching for initial wavelength solution MDRP_FITARCIMAGE: r2: Setting ncoeff= 5 MDRP_FITARCIMAGE: r2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: r2: Combining rows 355 to 359 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01860 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89728 0.16398 -0.01853 0.00120 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.781431 MDRP_FITARCIMAGE: r2: Best correlation = 0.781431 MDRP_FITARCIMAGE: r2: ASET = 3.89728 0.16398 -0.01853 0.00120 -0.00002 -0.00002 MDRP_CALIB: r2: Searching for wavelength solution MDRP_FITARCIMAGE: r2: Setting ncoeff= 6 MDRP_FITARCIMAGE: r2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89889 0.16156 -0.01841 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -192 to 191 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89889 0.16156 -0.01829 0.00116 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.769321 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89843 0.16213 -0.01843 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -191 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89851 0.16210 -0.01831 0.00116 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.773566 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89829 0.16258 -0.01844 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89829 0.16258 -0.01832 0.00118 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.777495 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89797 0.16269 -0.01845 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89805 0.16293 -0.01833 0.00120 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.769719 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89782 0.16314 -0.01845 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89782 0.16314 -0.01833 0.00116 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.771939 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89751 0.16324 -0.01853 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89758 0.16322 -0.01846 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.769652 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89752 0.16365 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89744 0.16341 -0.01853 0.00116 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767575 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89736 0.16370 -0.01853 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89736 0.16370 -0.01853 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.770964 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89736 0.16370 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89728 0.16373 -0.01853 0.00118 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.770387 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01860 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89728 0.16398 -0.01853 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.768984 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01854 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89728 0.16399 -0.01847 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.771097 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01860 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89728 0.16398 -0.01847 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.770602 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89736 0.16370 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89736 0.16397 -0.01847 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.770167 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89736 0.16370 -0.01853 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89736 0.16370 -0.01859 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.769722 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89752 0.16364 -0.01853 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89760 0.16362 -0.01840 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.771191 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89768 0.16358 -0.01858 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89776 0.16356 -0.01846 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.771025 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89782 0.16313 -0.01851 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89798 0.16335 -0.01839 0.00118 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.772611 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89814 0.16303 -0.01850 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89822 0.16300 -0.01838 0.00116 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.773183 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89845 0.16253 -0.01843 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89853 0.16277 -0.01831 0.00116 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.771256 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89876 0.16242 -0.01842 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -191 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89876 0.16242 -0.01830 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.772529 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89906 0.16191 -0.01841 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -191 to 191 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89914 0.16215 -0.01829 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.771531 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89954 0.16175 -0.01839 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -191 to 191 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89946 0.16151 -0.01828 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.770175 XY2TRACESET: r2: Total rejected = 0 MDRP_FITARCIMAGE: r2: Iterating flux-weighted centers MDRP_FITARCIMAGE: r2: Discarding line 61, at 9657.7860 Ang: RMS= 1.4339991 pix MDRP_FITARCIMAGE: r2: Discarding line 63, at 9784.5030 Ang: RMS= 0.43947794 pix MDRP_FITARCIMAGE: r2: Number of arc lines: 63 MDRP_FITARCIMAGE: r2: Iteration 0 XY2TRACESET: r2: Total rejected = 7404 MDRP_FITARCIMAGE: r2: Rejecting line at 5689.8163 Ang MDRP_FITARCIMAGE: r2: Iteration 1 XY2TRACESET: r2: Total rejected = 7300 MDRP_FITARCIMAGE: r2: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: r2: Iteration 2 XY2TRACESET: r2: Total rejected = 7230 MDRP_FITARCIMAGE: r2: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: r2: Iteration 3 XY2TRACESET: r2: Total rejected = 7145 MDRP_FITARCIMAGE: r2: Rejecting line at 5400.5616 Ang MDRP_FITARCIMAGE: r2: Iteration 4 XY2TRACESET: r2: Total rejected = 7059 MDRP_FITARCIMAGE: r2: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: r2: Iteration 5 XY2TRACESET: r2: Total rejected = 6894 MDRP_FITARCIMAGE: r2: Rejecting line at 5820.1558 Ang MDRP_FITARCIMAGE: r2: Iteration 6 XY2TRACESET: r2: Total rejected = 6831 MDRP_FITARCIMAGE: r2: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: r2: Iteration 7 XY2TRACESET: r2: Total rejected = 6768 MDRP_FITARCIMAGE: r2: Iterations done XY2TRACESET: r2: Total rejected = 6543 XY2TRACESET: r2: Total rejected = 0 XY2TRACESET: r2: Total rejected = 0 XY2TRACESET: r2: Total rejected = 0 MDRP_FITARCIMAGE: r2: Line 0 5400.5616 1.97868e-05 Reject MDRP_FITARCIMAGE: r2: Line 1 5460.7530 6.01492e-06 MDRP_FITARCIMAGE: r2: Line 2 5656.6588 1.15065e-05 Reject MDRP_FITARCIMAGE: r2: Line 3 5675.8600 1.20056e-05 Reject MDRP_FITARCIMAGE: r2: Line 4 5689.8163 1.19543e-05 Reject MDRP_FITARCIMAGE: r2: Line 5 5719.5300 1.33760e-05 Reject MDRP_FITARCIMAGE: r2: Line 6 5769.5980 2.53943e-06 MDRP_FITARCIMAGE: r2: Line 7 5790.6630 2.18904e-06 MDRP_FITARCIMAGE: r2: Line 8 5820.1558 1.17706e-05 Reject MDRP_FITARCIMAGE: r2: Line 9 5852.4880 3.57042e-06 MDRP_FITARCIMAGE: r2: Line 10 5881.8950 3.59364e-06 MDRP_FITARCIMAGE: r2: Line 11 5944.8340 3.60245e-06 MDRP_FITARCIMAGE: r2: Line 12 5965.4710 1.13026e-05 Reject MDRP_FITARCIMAGE: r2: Line 13 6029.9970 1.82074e-06 MDRP_FITARCIMAGE: r2: Line 14 6074.3380 1.14403e-06 MDRP_FITARCIMAGE: r2: Line 15 6096.1630 1.04576e-06 MDRP_FITARCIMAGE: r2: Line 16 6143.0630 7.48564e-07 MDRP_FITARCIMAGE: r2: Line 17 6163.5940 8.79482e-07 MDRP_FITARCIMAGE: r2: Line 18 6217.2810 9.04674e-07 MDRP_FITARCIMAGE: r2: Line 19 6266.4950 7.34532e-07 MDRP_FITARCIMAGE: r2: Line 20 6304.7890 1.48848e-06 MDRP_FITARCIMAGE: r2: Line 21 6334.4280 2.04452e-06 MDRP_FITARCIMAGE: r2: Line 22 6382.9920 2.61855e-06 MDRP_FITARCIMAGE: r2: Line 23 6402.2460 2.68007e-06 MDRP_FITARCIMAGE: r2: Line 24 6438.4700 2.29084e-06 MDRP_FITARCIMAGE: r2: Line 25 6506.5280 3.29745e-06 MDRP_FITARCIMAGE: r2: Line 26 6532.8820 3.62926e-06 MDRP_FITARCIMAGE: r2: Line 27 6598.9530 3.79609e-06 MDRP_FITARCIMAGE: r2: Line 28 6717.0430 3.80013e-06 MDRP_FITARCIMAGE: r2: Line 29 6929.4670 3.10417e-06 MDRP_FITARCIMAGE: r2: Line 30 7032.4128 2.36637e-06 MDRP_FITARCIMAGE: r2: Line 31 7173.9380 1.61191e-06 MDRP_FITARCIMAGE: r2: Line 32 7245.1670 1.54828e-06 MDRP_FITARCIMAGE: r2: Line 33 7438.9000 4.07569e-06 MDRP_FITARCIMAGE: r2: Line 34 7488.8710 5.22553e-06 MDRP_FITARCIMAGE: r2: Line 35 7503.8691 9.83919e-06 MDRP_FITARCIMAGE: r2: Line 36 7514.6518 9.70220e-06 MDRP_FITARCIMAGE: r2: Line 37 7535.7740 6.43812e-06 MDRP_FITARCIMAGE: r2: Line 38 7635.1060 7.96914e-06 MDRP_FITARCIMAGE: r2: Line 39 8014.7860 8.98120e-06 MDRP_FITARCIMAGE: r2: Line 40 8103.6930 7.21360e-06 MDRP_FITARCIMAGE: r2: Line 41 8300.3260 3.54986e-06 MDRP_FITARCIMAGE: r2: Line 42 8377.6065 7.47159e-06 MDRP_FITARCIMAGE: r2: Line 43 8408.2096 7.53487e-06 MDRP_FITARCIMAGE: r2: Line 44 8495.3598 3.66026e-06 MDRP_FITARCIMAGE: r2: Line 45 8521.4422 9.56692e-06 MDRP_FITARCIMAGE: r2: Line 46 8591.2583 3.12069e-06 MDRP_FITARCIMAGE: r2: Line 47 8634.6470 1.87914e-06 MDRP_FITARCIMAGE: r2: Line 48 8654.3831 2.16083e-06 MDRP_FITARCIMAGE: r2: Line 49 8853.8670 1.55040e-06 MDRP_FITARCIMAGE: r2: Line 50 8919.5007 2.48474e-06 MDRP_FITARCIMAGE: r2: Line 51 9122.9674 7.49049e-06 MDRP_FITARCIMAGE: r2: Line 52 9201.7590 2.22848e-06 MDRP_FITARCIMAGE: r2: Line 53 9300.8530 2.27380e-06 MDRP_FITARCIMAGE: r2: Line 54 9313.1386 6.50548e-06 MDRP_FITARCIMAGE: r2: Line 55 9326.5070 2.46640e-06 MDRP_FITARCIMAGE: r2: Line 56 9425.3790 3.03149e-06 MDRP_FITARCIMAGE: r2: Line 57 9459.2100 4.53668e-06 MDRP_FITARCIMAGE: r2: Line 58 9486.6800 4.55146e-06 MDRP_FITARCIMAGE: r2: Line 59 9534.1630 2.82343e-06 MDRP_FITARCIMAGE: r2: Line 60 9547.4000 4.64745e-06 MDRP_FITARCIMAGE: r2: Line 61 9657.7860 1.11251e-05 Reject-RMS MDRP_FITARCIMAGE: r2: Line 62 9665.4240 2.28987e-06 MDRP_FITARCIMAGE: r2: Line 63 9784.5030 1.20346e-05 Reject-RMS MDRP_FITARCIMAGE: r2: Line 64 10139.750 1.52019e-06 XY2TRACESET: r2: Total rejected = 0 MDRP_FITARCIMAGE: r2: Time 132. seconds elapsed MDRP_CALIB: r2: Number of Rejected lamp lines: 1 out of 45 lamp lines EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 13364 pixels XY2TRACESET: r2: Total rejected = 4929 MDRP_FITDISPERSION: r2: Median wavelength widths = 1.01 1.03 1.06 1.05 pix (L B T R) MDRP_CALIB: r2: GOOD ARC!, sdR-r2-00189570.fit MDRP_CALIB: r2: CREATING FIBERFLATS---------------------- MDRP_CALIB: r2: Create fiberflats for flat # 1 of 1 MDRP_CALIB: r2: Flat sdR-r2-00189569.fit paired with arc sdR-r2-00189570.fit EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 9795 pixels MDRP_SUPERFLAT: r2: Wavelength range = 5236.6201 10422.247 MDRP_SUPERFLAT: r2: Creating superflat from 702 fibers MDRP_FIBERFLAT: r2: Number of fiberflat points LE 0 = 708872 ML_QAIFUFLAT: r2: Normalizing to 4th highest value of 1.06003 ML_MATCHMJD: r2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart01/56898 MDRP_CALIB: r2: Writing calibration structure /uufs/chpc.utah.edu/common/home/sdss03/mangawork/manga/spectro/redux/v1_5_4/8137/56983/calibstruct-r2.sav MDRP_CALIB: r2: Elapsed time = 811. seconds MDRP_REDUCE: r2: FINISHED CALIBRATION--------------- MDRP_REDUCE: r2: CALIB KEYWORD SET. SKIPPING SCIENCE AND ONLY REDUCING CALIBRATION FILES! MDRP_REDUCE: Elapsed time = 813. seconds MDRP_REDUCE2D: Error. No science extractions were done. Problem with calibration files for camera r2 MDRP_REDUCE2D: Continuing with next camera MDRP_REDUCE2D: Time to extract/sky-sub all cameras = 3048. seconds MDRP_REDUCE2D: CALIB keyword set, or not all cameras processed. Skipping flux calibration. MDRP_REDUCE2D: Time to flux calibration = 0. seconds MDRP_REDUCE2D: Max memory usage = 1549.7 MB MDRP_REDUCE2D: Total time for MDRP_REDUCE2D = 3049. seconds MDRP_REDUCE2D: Successful completion of MDRP_REDUCE2D at Fri Mar 11 14:14:40 2016