MDRP_REDUCE2D: Log file mgDiag2d-8330-57179.log opened Fri Mar 11 13:22:52 2016 MDRP_REDUCE2D: IDL version: x86_64 linux unix linux 7.1.1 Aug 21 2009 64 64 MDRP_REDUCE2D: UNAME: Linux kp114 2.6.32-504.30.3.el6.x86_64 #1 SMP Wed Jul 15 10:13:09 UTC 2015 x86_64 x86_64 x86_64 GNU/Linux MDRP_REDUCE2D: DISPLAY= MDRP_REDUCE2D: mangadrp version v1_5_4 MDRP_REDUCE2D: mangacore version v1_2_3 MDRP_REDUCE2D: idlutils version v5_5_23 MDRP_REDUCE2D: specflat version v1_26 MDRP_REDUCE2D: Plan file mgPlan2d-8330-57179.par MDRP_REDUCE2D: DOCAMS = b1 r1 b2 r2 MDRP_REDUCE2D: Begin plate 8330 at Fri Mar 11 13:22:54 2016 MDRP_REDUCE2D: Slitmap file = slitmap-8330-57179-02.par ML_READSLITMAP: b1: Reading slitmap from /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/slitmaps/0083XX/8330/slitmap-8330-57179-02.par MDRP_REDUCE: b1: STARTING CALIBRATION--------------- MDRP_CALIB: b1: LOOP THROUGH FLATS----------------------------- MDRP_CALIB: b1: Tracing flat # 1 of 2 MDRP_CALIB: b1: Reading flat sdR-b1-00200803.fit SDSSPROC: b1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b1: Selecting op file boss_pixbias-56859-b1.fits.gz SDSSPROC: b1: Read noise = 2.06436 1.95606 1.86819 1.88564 electrons FINDOPFILE: b1: Selecting op file pixflatave-55056-b1.fits.gz SDSSPROC: b1: Correcting with pixel flat pixflatave-55056-b1.fits.gz FINDOPFILE: b1: Selecting op file badpixels-56149-b1.fits.gz SDSSPROC: b1: Correcting with badpixels badpixels-56149-b1.fits.gz MDRP_CALIB: b1: Tracing fibers in sdR-b1-00200803.fit ML_MATCHMJD: b1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-02-56690.par MDRP_CCTRACEFIBERS: b1: Total Fibers: 709 MDRP_CCPEAKS: b1: Traces scaled by 1.00250 MDRP_CCPEAKS: b1: Traces shifted by -5.40000 ccd units MDRP_CCPEAKS: b1: Trace correlation = 0.968314 MDRP_CCPEAKS: b1: THIS PASS: MDRP_CCPEAKS: b1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCPEAKS: b1: Number of peaks Found: 704 MDRP_CCPEAKS: b1: Number of Missing Fibers: 5 MDRP_CCPEAKS: b1: Number of missing edge fibers: 5 MDRP_CCPEAKS: b1: Number of missing interior fibers: 0 MDRP_CCTRACEFIBERS: b1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCTRACEFIBERS: b1: TOTAL MISSING FIBERS: 5 MDRP_CCTRACEFIBERS: b1: MISSING FIBERS (1-indexed): 149 285 381 485 613 MDRP_CCTRACEFIBERS: b1: MISSING PEAKS 1027 1677 2139 2633 3275 MDRP_CCTRACEFIBERS: b1: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: b1: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: b1: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: b1: Warning: Fixing traces: 148 284 380 484 612 MDRP_CCTRACEFIBERS: b1: Fiber 148 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 284 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 380 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 484 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 612 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: b1: Fitting traces in sdR-b1-00200803.fit XY2TRACESET: b1: Total rejected = 512765 MDRP_CALIB: b1: Extracting flat with proftype= 1 EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 6 pixels MDRP_FITFLATWIDTH: b1: Median spatial widths = 0.95 0.96 1.11 1.04 pix (LL UL LR UR) ML_CCTWEAK: b1: Cross-correlating peaks up/down detector XY2TRACESET: b1: Total rejected = 473099 EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 8 pixels MDRP_FITFLATWIDTH: b1: Median spatial widths = 0.95 0.96 1.11 1.04 pix (LL UL LR UR) MDRP_CALIB: b1: Using proftype= 1 MDRP_CALIB: b1: Found 0 bright pixels in extracted flat sdR-b1-00200803.fit MDRP_CALIB: b1: GOOD FLAT!, sdR-b1-00200803.fit MDRP_CALIB: b1: Tracing flat # 2 of 2 MDRP_CALIB: b1: Reading flat sdR-b1-00200808.fit SDSSPROC: b1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b1: Selecting op file boss_pixbias-56859-b1.fits.gz SDSSPROC: b1: Read noise = 2.05230 1.88261 1.93093 1.87658 electrons FINDOPFILE: b1: Selecting op file pixflatave-55056-b1.fits.gz SDSSPROC: b1: Correcting with pixel flat pixflatave-55056-b1.fits.gz FINDOPFILE: b1: Selecting op file badpixels-56149-b1.fits.gz SDSSPROC: b1: Correcting with badpixels badpixels-56149-b1.fits.gz MDRP_CALIB: b1: Tracing fibers in sdR-b1-00200808.fit ML_MATCHMJD: b1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-02-56690.par MDRP_CCTRACEFIBERS: b1: Total Fibers: 709 MDRP_CCPEAKS: b1: Traces scaled by 1.00250 MDRP_CCPEAKS: b1: Traces shifted by -6.30000 ccd units MDRP_CCPEAKS: b1: Trace correlation = 0.966876 MDRP_CCPEAKS: b1: THIS PASS: MDRP_CCPEAKS: b1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCPEAKS: b1: Number of peaks Found: 704 MDRP_CCPEAKS: b1: Number of Missing Fibers: 5 MDRP_CCPEAKS: b1: Number of missing edge fibers: 5 MDRP_CCPEAKS: b1: Number of missing interior fibers: 0 MDRP_CCTRACEFIBERS: b1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCTRACEFIBERS: b1: TOTAL MISSING FIBERS: 5 MDRP_CCTRACEFIBERS: b1: MISSING FIBERS (1-indexed): 149 285 381 485 613 MDRP_CCTRACEFIBERS: b1: MISSING PEAKS 1026 1676 2138 2632 3274 MDRP_CCTRACEFIBERS: b1: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: b1: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: b1: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: b1: Warning: Fixing traces: 148 284 380 484 612 MDRP_CCTRACEFIBERS: b1: Fiber 148 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 284 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 380 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 484 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Fiber 612 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b1: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: b1: Fitting traces in sdR-b1-00200808.fit XY2TRACESET: b1: Total rejected = 517449 MDRP_CALIB: b1: Extracting flat with proftype= 1 EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 10 pixels MDRP_FITFLATWIDTH: b1: Median spatial widths = 0.93 0.95 1.07 1.04 pix (LL UL LR UR) ML_CCTWEAK: b1: Cross-correlating peaks up/down detector XY2TRACESET: b1: Total rejected = 478762 EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 12 pixels MDRP_FITFLATWIDTH: b1: Median spatial widths = 0.93 0.95 1.07 1.04 pix (LL UL LR UR) MDRP_CALIB: b1: Using proftype= 1 MDRP_CALIB: b1: Found 0 bright pixels in extracted flat sdR-b1-00200808.fit MDRP_CALIB: b1: GOOD FLAT!, sdR-b1-00200808.fit MDRP_CALIB: b1: LOOP THROUGH ARCS------------------------- MDRP_CALIB: b1: Extracting arc # 1 of 2 MDRP_CALIB: b1: Reading arc sdR-b1-00200804.fit SDSSPROC: b1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b1: Selecting op file boss_pixbias-56859-b1.fits.gz SDSSPROC: b1: Read noise = 2.03151 1.90695 1.83105 1.86476 electrons FINDOPFILE: b1: Selecting op file pixflatave-55056-b1.fits.gz SDSSPROC: b1: Correcting with pixel flat pixflatave-55056-b1.fits.gz FINDOPFILE: b1: Selecting op file badpixels-56149-b1.fits.gz SDSSPROC: b1: Correcting with badpixels badpixels-56149-b1.fits.gz MDRP_CALIB: b1: Fraction of bad pixels in arc = 3.41987e-05 MDRP_CALIB: b1: Arc sdR-b1-00200804.fit paired with flat sdR-b1-00200803.fit MDRP_MATCH_TRACE: b1: Iteration: 0 Pixels Rejected: 29108 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 1 Pixels Rejected: 443 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 2 Pixels Rejected: 139 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 3 Pixels Rejected: 45 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 4 Pixels Rejected: 16 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 5 Pixels Rejected: 7 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 6 Pixels Rejected: 1 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 7 Pixels Rejected: 0 Finished? 1 MDRP_MATCH_TRACE: b1: Warning: Large number of pixels rejected! 29759 MDRP_CALIB: b1: Shifting traces with match_trace 0.0319214 MDRP_CALIB: b1: Extracting arc EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 16 pixels MDRP_CALIB: b1: Searching for initial wavelength solution MDRP_FITARCIMAGE: b1: Setting ncoeff= 5 MDRP_FITARCIMAGE: b1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: b1: Combining rows 352 to 356 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67873 0.20310 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.738432 MDRP_FITARCIMAGE: b1: Best correlation = 0.738432 MDRP_FITARCIMAGE: b1: ASET = 3.67873 0.20310 -0.02427 0.00120 MDRP_CALIB: b1: Searching for wavelength solution MDRP_FITARCIMAGE: b1: Setting ncoeff= 6 MDRP_FITARCIMAGE: b1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68035 0.20133 -0.02398 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 153 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68025 0.20136 -0.02410 0.00124 ARCFIT_GUESS: b1: Initial correlation = 0.796825 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68015 0.20140 -0.02398 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 153 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68005 0.20143 -0.02411 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.793255 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67974 0.20195 -0.02412 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67965 0.20198 -0.02424 0.00122 ARCFIT_GUESS: b1: Initial correlation = 0.794286 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67955 0.20202 -0.02412 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67945 0.20232 -0.02425 0.00126 ARCFIT_GUESS: b1: Initial correlation = 0.792035 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67934 0.20249 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67924 0.20252 -0.02425 0.00122 ARCFIT_GUESS: b1: Initial correlation = 0.790665 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67914 0.20256 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67914 0.20256 -0.02425 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.792235 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67914 0.20255 -0.02401 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67904 0.20285 -0.02414 0.00124 ARCFIT_GUESS: b1: Initial correlation = 0.782856 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20303 -0.02414 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67883 0.20306 -0.02426 0.00126 ARCFIT_GUESS: b1: Initial correlation = 0.788049 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67873 0.20310 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.789591 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67873 0.20310 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.789322 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67873 0.20310 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.787044 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67873 0.20310 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.787717 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67873 0.20310 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.786846 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20302 -0.02408 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67883 0.20306 -0.02420 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.785587 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20302 -0.02408 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67883 0.20306 -0.02420 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.787624 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20303 -0.02414 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67893 0.20303 -0.02426 0.00122 ARCFIT_GUESS: b1: Initial correlation = 0.787266 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67913 0.20296 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67913 0.20269 -0.02425 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.790322 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67934 0.20249 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67934 0.20249 -0.02425 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.792322 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67954 0.20242 -0.02412 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67954 0.20242 -0.02424 0.00126 ARCFIT_GUESS: b1: Initial correlation = 0.793066 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67994 0.20187 -0.02399 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67984 0.20190 -0.02411 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.791020 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68014 0.20180 -0.02410 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68004 0.20184 -0.02423 0.00122 ARCFIT_GUESS: b1: Initial correlation = 0.791840 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68035 0.20133 -0.02410 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 153 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68035 0.20160 -0.02422 0.00128 ARCFIT_GUESS: b1: Initial correlation = 0.793367 XY2TRACESET: b1: Total rejected = 0 MDRP_FITARCIMAGE: b1: Iterating flux-weighted centers MDRP_FITARCIMAGE: b1: Discarding line 2, at 3654.8390 Ang: RMS= 0.74719532 pix MDRP_FITARCIMAGE: b1: Number of arc lines: 44 MDRP_FITARCIMAGE: b1: Iteration 0 XY2TRACESET: b1: Total rejected = 4958 MDRP_FITARCIMAGE: b1: Rejecting line at 5341.0938 Ang MDRP_FITARCIMAGE: b1: Iteration 1 XY2TRACESET: b1: Total rejected = 4943 MDRP_FITARCIMAGE: b1: Rejecting line at 3650.1570 Ang MDRP_FITARCIMAGE: b1: Iteration 2 XY2TRACESET: b1: Total rejected = 4881 MDRP_FITARCIMAGE: b1: Rejecting line at 4306.6720 Ang MDRP_FITARCIMAGE: b1: Iteration 3 XY2TRACESET: b1: Total rejected = 4813 MDRP_FITARCIMAGE: b1: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: b1: Iteration 4 XY2TRACESET: b1: Total rejected = 4839 MDRP_FITARCIMAGE: b1: Rejecting line at 3983.8390 Ang MDRP_FITARCIMAGE: b1: Iteration 5 XY2TRACESET: b1: Total rejected = 4919 MDRP_FITARCIMAGE: b1: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: b1: Iteration 6 XY2TRACESET: b1: Total rejected = 4920 MDRP_FITARCIMAGE: b1: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: b1: Iteration 7 XY2TRACESET: b1: Total rejected = 4952 MDRP_FITARCIMAGE: b1: Rejecting line at 5689.8163 Ang MDRP_FITARCIMAGE: b1: Iteration 8 XY2TRACESET: b1: Total rejected = 4963 MDRP_FITARCIMAGE: b1: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: b1: Iteration 9 XY2TRACESET: b1: Total rejected = 4992 MDRP_FITARCIMAGE: b1: Iterations done XY2TRACESET: b1: Total rejected = 4992 XY2TRACESET: b1: Total rejected = 0 XY2TRACESET: b1: Total rejected = 0 XY2TRACESET: b1: Total rejected = 0 MDRP_FITARCIMAGE: b1: Line 0 3610.5080 7.23534e-07 MDRP_FITARCIMAGE: b1: Line 1 3650.1570 0.00000 Reject-offset MDRP_FITARCIMAGE: b1: Line 2 3654.8390 0.00000 Reject-offset MDRP_FITARCIMAGE: b1: Line 3 3983.8390 1.09792e-05 Reject MDRP_FITARCIMAGE: b1: Line 4 4046.5720 3.59843e-06 MDRP_FITARCIMAGE: b1: Line 5 4077.8380 3.22689e-06 MDRP_FITARCIMAGE: b1: Line 6 4306.6720 1.17126e-05 Reject MDRP_FITARCIMAGE: b1: Line 7 4339.2200 8.00102e-06 MDRP_FITARCIMAGE: b1: Line 8 4347.5060 3.05468e-06 MDRP_FITARCIMAGE: b1: Line 9 4358.3370 3.02029e-06 MDRP_FITARCIMAGE: b1: Line 10 4412.9890 1.04797e-05 MDRP_FITARCIMAGE: b1: Line 11 4662.3520 5.94678e-06 MDRP_FITARCIMAGE: b1: Line 12 4678.1490 2.75138e-06 MDRP_FITARCIMAGE: b1: Line 13 4799.9120 2.51827e-06 MDRP_FITARCIMAGE: b1: Line 14 4916.0700 3.37458e-06 MDRP_FITARCIMAGE: b1: Line 15 5085.8220 1.85243e-06 MDRP_FITARCIMAGE: b1: Line 16 5330.7775 8.53641e-06 MDRP_FITARCIMAGE: b1: Line 17 5341.0938 1.75707e-05 Reject MDRP_FITARCIMAGE: b1: Line 18 5400.5616 5.01141e-06 MDRP_FITARCIMAGE: b1: Line 19 5460.7530 2.10659e-06 MDRP_FITARCIMAGE: b1: Line 20 5656.6588 1.04112e-05 Reject MDRP_FITARCIMAGE: b1: Line 21 5675.8600 1.11978e-05 Reject MDRP_FITARCIMAGE: b1: Line 22 5689.8163 1.10587e-05 Reject MDRP_FITARCIMAGE: b1: Line 23 5719.5300 1.11755e-05 Reject MDRP_FITARCIMAGE: b1: Line 24 5769.5980 1.49825e-06 MDRP_FITARCIMAGE: b1: Line 25 5790.6630 1.38452e-06 MDRP_FITARCIMAGE: b1: Line 26 5820.1558 5.21750e-06 MDRP_FITARCIMAGE: b1: Line 27 5852.4880 1.47267e-06 MDRP_FITARCIMAGE: b1: Line 28 5881.8950 1.47986e-06 MDRP_FITARCIMAGE: b1: Line 29 5944.8340 1.53607e-06 MDRP_FITARCIMAGE: b1: Line 30 5965.4710 9.48179e-06 Reject MDRP_FITARCIMAGE: b1: Line 31 6029.9970 2.24314e-06 MDRP_FITARCIMAGE: b1: Line 32 6074.3380 1.36115e-06 MDRP_FITARCIMAGE: b1: Line 33 6096.1630 1.08220e-06 MDRP_FITARCIMAGE: b1: Line 34 6143.0630 9.25943e-07 MDRP_FITARCIMAGE: b1: Line 35 6163.5940 1.33860e-06 MDRP_FITARCIMAGE: b1: Line 36 6217.2810 3.16111e-06 MDRP_FITARCIMAGE: b1: Line 37 6266.4950 5.17940e-06 MDRP_FITARCIMAGE: b1: Line 38 6304.7890 5.64215e-06 MDRP_FITARCIMAGE: b1: Line 39 6334.4280 2.68558e-06 MDRP_FITARCIMAGE: b1: Line 40 6382.9920 2.18427e-06 MDRP_FITARCIMAGE: b1: Line 41 6402.2460 1.79891e-06 MDRP_FITARCIMAGE: b1: Line 42 6438.4700 3.63895e-06 MDRP_FITARCIMAGE: b1: Line 43 6506.5280 9.64235e-06 MDRP_FITARCIMAGE: b1: Line 44 6532.8820 8.21497e-06 XY2TRACESET: b1: Total rejected = 0 MDRP_FITARCIMAGE: b1: Time 107. seconds elapsed MDRP_CALIB: b1: Number of Rejected lamp lines: 2 out of 45 lamp lines EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 9079 pixels XY2TRACESET: b1: Total rejected = 1799 MDRP_FITDISPERSION: b1: Median wavelength widths = 0.99 1.03 1.07 1.11 pix (L B T R) MDRP_CALIB: b1: GOOD ARC!, sdR-b1-00200804.fit MDRP_CALIB: b1: Extracting arc # 2 of 2 MDRP_CALIB: b1: Reading arc sdR-b1-00200807.fit SDSSPROC: b1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b1: Selecting op file boss_pixbias-56859-b1.fits.gz SDSSPROC: b1: Read noise = 2.03934 1.84445 1.90300 1.85396 electrons FINDOPFILE: b1: Selecting op file pixflatave-55056-b1.fits.gz SDSSPROC: b1: Correcting with pixel flat pixflatave-55056-b1.fits.gz FINDOPFILE: b1: Selecting op file badpixels-56149-b1.fits.gz SDSSPROC: b1: Correcting with badpixels badpixels-56149-b1.fits.gz MDRP_CALIB: b1: Fraction of bad pixels in arc = 3.49705e-05 MDRP_CALIB: b1: Arc sdR-b1-00200807.fit paired with flat sdR-b1-00200808.fit MDRP_MATCH_TRACE: b1: Iteration: 0 Pixels Rejected: 28536 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 1 Pixels Rejected: 327 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 2 Pixels Rejected: 71 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 3 Pixels Rejected: 22 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 4 Pixels Rejected: 10 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 5 Pixels Rejected: 5 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 6 Pixels Rejected: 3 Finished? 0 MDRP_MATCH_TRACE: b1: Iteration: 7 Pixels Rejected: 0 Finished? 1 MDRP_MATCH_TRACE: b1: Warning: Large number of pixels rejected! 28974 MDRP_CALIB: b1: Shifting traces with match_trace 0.000854492 MDRP_CALIB: b1: Extracting arc EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 28 pixels MDRP_CALIB: b1: Searching for initial wavelength solution MDRP_FITARCIMAGE: b1: Setting ncoeff= 5 MDRP_FITARCIMAGE: b1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: b1: Combining rows 352 to 356 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67863 0.20313 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.739443 MDRP_FITARCIMAGE: b1: Best correlation = 0.739443 MDRP_FITARCIMAGE: b1: ASET = 3.67863 0.20313 -0.02427 0.00120 MDRP_CALIB: b1: Searching for wavelength solution MDRP_FITARCIMAGE: b1: Setting ncoeff= 6 MDRP_FITARCIMAGE: b1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68015 0.20140 -0.02410 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 153 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68015 0.20140 -0.02422 0.00126 ARCFIT_GUESS: b1: Initial correlation = 0.800344 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67995 0.20147 -0.02411 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 153 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67995 0.20147 -0.02423 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.794915 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67974 0.20194 -0.02400 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67965 0.20197 -0.02412 0.00124 ARCFIT_GUESS: b1: Initial correlation = 0.791137 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67955 0.20201 -0.02406 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67945 0.20231 -0.02419 0.00128 ARCFIT_GUESS: b1: Initial correlation = 0.791221 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67934 0.20248 -0.02407 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67924 0.20252 -0.02419 0.00124 ARCFIT_GUESS: b1: Initial correlation = 0.789986 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67914 0.20256 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67904 0.20259 -0.02426 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.792776 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20303 -0.02414 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67893 0.20276 -0.02426 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.790509 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67873 0.20310 -0.02427 0.00122 ARCFIT_GUESS: b1: Initial correlation = 0.787443 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67863 0.20313 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.786845 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67863 0.20313 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.786368 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67863 0.20313 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.787289 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67863 0.20313 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.787353 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67863 0.20313 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.785179 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67873 0.20310 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.787412 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67873 0.20310 -0.02415 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67873 0.20310 -0.02427 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.789978 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67893 0.20303 -0.02414 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 151 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67893 0.20303 -0.02426 0.00126 ARCFIT_GUESS: b1: Initial correlation = 0.788348 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67914 0.20256 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67904 0.20286 -0.02426 0.00122 ARCFIT_GUESS: b1: Initial correlation = 0.792275 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67934 0.20249 -0.02413 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67934 0.20249 -0.02425 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.793353 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67954 0.20242 -0.02412 0.00124 ARCFIT_ITER: b1: Searching lags from -152 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67944 0.20245 -0.02425 0.00122 ARCFIT_GUESS: b1: Initial correlation = 0.791713 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.67974 0.20195 -0.02412 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.67974 0.20195 -0.02424 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.793533 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68014 0.20180 -0.02398 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 152 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68004 0.20183 -0.02411 0.00122 ARCFIT_GUESS: b1: Initial correlation = 0.788542 XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b1: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Searching about coefficients = 3.68035 0.20133 -0.02410 0.00124 ARCFIT_ITER: b1: Searching lags from -153 to 153 spaced 1 pixels XY2TRACESET: b1: Total rejected = 0 ARCFIT_GUESS: b1: Initial wavelength fit = 3.68035 0.20133 -0.02422 0.00120 ARCFIT_GUESS: b1: Initial correlation = 0.793244 XY2TRACESET: b1: Total rejected = 0 MDRP_FITARCIMAGE: b1: Iterating flux-weighted centers MDRP_FITARCIMAGE: b1: Discarding line 2, at 3654.8390 Ang: RMS= 0.70106195 pix MDRP_FITARCIMAGE: b1: Number of arc lines: 44 MDRP_FITARCIMAGE: b1: Iteration 0 XY2TRACESET: b1: Total rejected = 4924 MDRP_FITARCIMAGE: b1: Rejecting line at 5341.0938 Ang MDRP_FITARCIMAGE: b1: Iteration 1 XY2TRACESET: b1: Total rejected = 4909 MDRP_FITARCIMAGE: b1: Rejecting line at 4306.6720 Ang MDRP_FITARCIMAGE: b1: Iteration 2 XY2TRACESET: b1: Total rejected = 4850 MDRP_FITARCIMAGE: b1: Rejecting line at 3650.1570 Ang MDRP_FITARCIMAGE: b1: Iteration 3 XY2TRACESET: b1: Total rejected = 4871 MDRP_FITARCIMAGE: b1: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: b1: Iteration 4 XY2TRACESET: b1: Total rejected = 4880 MDRP_FITARCIMAGE: b1: Rejecting line at 3983.8390 Ang MDRP_FITARCIMAGE: b1: Iteration 5 XY2TRACESET: b1: Total rejected = 4981 MDRP_FITARCIMAGE: b1: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: b1: Iteration 6 XY2TRACESET: b1: Total rejected = 4985 MDRP_FITARCIMAGE: b1: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: b1: Iteration 7 XY2TRACESET: b1: Total rejected = 5010 MDRP_FITARCIMAGE: b1: Rejecting line at 5689.8163 Ang MDRP_FITARCIMAGE: b1: Iteration 8 XY2TRACESET: b1: Total rejected = 5025 MDRP_FITARCIMAGE: b1: Iterations done XY2TRACESET: b1: Total rejected = 5025 XY2TRACESET: b1: Total rejected = 0 XY2TRACESET: b1: Total rejected = 0 XY2TRACESET: b1: Total rejected = 0 MDRP_FITARCIMAGE: b1: Line 0 3610.5080 7.00917e-07 MDRP_FITARCIMAGE: b1: Line 1 3650.1570 0.00000 Reject-offset MDRP_FITARCIMAGE: b1: Line 2 3654.8390 0.00000 Reject-offset MDRP_FITARCIMAGE: b1: Line 3 3983.8390 1.10196e-05 Reject MDRP_FITARCIMAGE: b1: Line 4 4046.5720 3.41800e-06 MDRP_FITARCIMAGE: b1: Line 5 4077.8380 2.99599e-06 MDRP_FITARCIMAGE: b1: Line 6 4306.6720 1.12417e-05 Reject MDRP_FITARCIMAGE: b1: Line 7 4339.2200 8.30459e-06 MDRP_FITARCIMAGE: b1: Line 8 4347.5060 2.95174e-06 MDRP_FITARCIMAGE: b1: Line 9 4358.3370 3.14806e-06 MDRP_FITARCIMAGE: b1: Line 10 4412.9890 1.02321e-05 MDRP_FITARCIMAGE: b1: Line 11 4662.3520 6.21421e-06 MDRP_FITARCIMAGE: b1: Line 12 4678.1490 2.72787e-06 MDRP_FITARCIMAGE: b1: Line 13 4799.9120 2.38591e-06 MDRP_FITARCIMAGE: b1: Line 14 4916.0700 3.60861e-06 MDRP_FITARCIMAGE: b1: Line 15 5085.8220 1.95381e-06 MDRP_FITARCIMAGE: b1: Line 16 5330.7775 8.13501e-06 MDRP_FITARCIMAGE: b1: Line 17 5341.0938 1.70123e-05 Reject MDRP_FITARCIMAGE: b1: Line 18 5400.5616 4.65684e-06 MDRP_FITARCIMAGE: b1: Line 19 5460.7530 2.12681e-06 MDRP_FITARCIMAGE: b1: Line 20 5656.6588 1.02223e-05 Reject MDRP_FITARCIMAGE: b1: Line 21 5675.8600 1.04023e-05 Reject MDRP_FITARCIMAGE: b1: Line 22 5689.8163 1.08349e-05 Reject MDRP_FITARCIMAGE: b1: Line 23 5719.5300 1.07074e-05 Reject MDRP_FITARCIMAGE: b1: Line 24 5769.5980 1.53082e-06 MDRP_FITARCIMAGE: b1: Line 25 5790.6630 1.51933e-06 MDRP_FITARCIMAGE: b1: Line 26 5820.1558 5.04270e-06 MDRP_FITARCIMAGE: b1: Line 27 5852.4880 1.99455e-06 MDRP_FITARCIMAGE: b1: Line 28 5881.8950 1.90431e-06 MDRP_FITARCIMAGE: b1: Line 29 5944.8340 2.09425e-06 MDRP_FITARCIMAGE: b1: Line 30 5965.4710 8.94831e-06 MDRP_FITARCIMAGE: b1: Line 31 6029.9970 2.70330e-06 MDRP_FITARCIMAGE: b1: Line 32 6074.3380 1.70465e-06 MDRP_FITARCIMAGE: b1: Line 33 6096.1630 1.24227e-06 MDRP_FITARCIMAGE: b1: Line 34 6143.0630 1.02367e-06 MDRP_FITARCIMAGE: b1: Line 35 6163.5940 1.38607e-06 MDRP_FITARCIMAGE: b1: Line 36 6217.2810 3.20570e-06 MDRP_FITARCIMAGE: b1: Line 37 6266.4950 5.16461e-06 MDRP_FITARCIMAGE: b1: Line 38 6304.7890 5.76656e-06 MDRP_FITARCIMAGE: b1: Line 39 6334.4280 2.64616e-06 MDRP_FITARCIMAGE: b1: Line 40 6382.9920 2.24290e-06 MDRP_FITARCIMAGE: b1: Line 41 6402.2460 1.87222e-06 MDRP_FITARCIMAGE: b1: Line 42 6438.4700 4.18818e-06 MDRP_FITARCIMAGE: b1: Line 43 6506.5280 9.87366e-06 MDRP_FITARCIMAGE: b1: Line 44 6532.8820 8.82040e-06 XY2TRACESET: b1: Total rejected = 0 MDRP_FITARCIMAGE: b1: Time 107. seconds elapsed MDRP_CALIB: b1: Number of Rejected lamp lines: 2 out of 45 lamp lines EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 11900 pixels XY2TRACESET: b1: Total rejected = 1608 MDRP_FITDISPERSION: b1: Median wavelength widths = 0.99 1.03 1.06 1.11 pix (L B T R) MDRP_CALIB: b1: GOOD ARC!, sdR-b1-00200807.fit MDRP_CALIB: b1: CREATING FIBERFLATS---------------------- MDRP_CALIB: b1: Create fiberflats for flat # 1 of 2 MDRP_CALIB: b1: Flat sdR-b1-00200803.fit paired with arc sdR-b1-00200804.fit MDRP_CALIB: b1: Reading flat sdR-b1-00200803.fit SDSSPROC: b1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b1: Selecting op file boss_pixbias-56859-b1.fits.gz SDSSPROC: b1: Read noise = 2.06436 1.95606 1.86819 1.88564 electrons FINDOPFILE: b1: Selecting op file pixflatave-55056-b1.fits.gz SDSSPROC: b1: Correcting with pixel flat pixflatave-55056-b1.fits.gz FINDOPFILE: b1: Selecting op file badpixels-56149-b1.fits.gz SDSSPROC: b1: Correcting with badpixels badpixels-56149-b1.fits.gz EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 11 pixels MDRP_SUPERFLAT: b1: Wavelength range = 3471.2368 6562.4556 MDRP_SUPERFLAT: b1: Creating superflat from 703 fibers MDRP_FIBERFLAT: b1: Number of fiberflat points LE 0 = 1067378 ML_QAIFUFLAT: b1: Normalizing to 4th highest value of 1.05060 ML_MATCHMJD: b1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart02/56895 MDRP_CALIB: b1: Create fiberflats for flat # 2 of 2 MDRP_CALIB: b1: Flat sdR-b1-00200808.fit paired with arc sdR-b1-00200807.fit MDRP_CALIB: b1: Reading flat sdR-b1-00200808.fit SDSSPROC: b1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b1: Selecting op file boss_pixbias-56859-b1.fits.gz SDSSPROC: b1: Read noise = 2.05230 1.88261 1.93093 1.87658 electrons FINDOPFILE: b1: Selecting op file pixflatave-55056-b1.fits.gz SDSSPROC: b1: Correcting with pixel flat pixflatave-55056-b1.fits.gz FINDOPFILE: b1: Selecting op file badpixels-56149-b1.fits.gz SDSSPROC: b1: Correcting with badpixels badpixels-56149-b1.fits.gz EXTRACT_IMAGE: b1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b1: masked 6 pixels MDRP_SUPERFLAT: b1: Wavelength range = 3470.6365 6561.9606 MDRP_SUPERFLAT: b1: Creating superflat from 704 fibers MDRP_FIBERFLAT: b1: Number of fiberflat points LE 0 = 1067473 ML_QAIFUFLAT: b1: Normalizing to 4th highest value of 1.05803 ML_MATCHMJD: b1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart02/56895 MDRP_CALIB: b1: Writing calibration structure /uufs/chpc.utah.edu/common/home/sdss03/mangawork/manga/spectro/redux/v1_5_4/8330/57179/calibstruct-b1.sav MDRP_CALIB: b1: Elapsed time = 1554. seconds MDRP_REDUCE: b1: FINISHED CALIBRATION--------------- MDRP_REDUCE: b1: CALIB KEYWORD SET. SKIPPING SCIENCE AND ONLY REDUCING CALIBRATION FILES! MDRP_REDUCE: Elapsed time = 1562. seconds MDRP_REDUCE2D: Error. No science extractions were done. Problem with calibration files for camera b1 MDRP_REDUCE2D: Continuing with next camera ML_READSLITMAP: r1: Reading slitmap from /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/slitmaps/0083XX/8330/slitmap-8330-57179-02.par MDRP_REDUCE: r1: STARTING CALIBRATION--------------- MDRP_CALIB: r1: LOOP THROUGH FLATS----------------------------- MDRP_CALIB: r1: Tracing flat # 1 of 2 MDRP_CALIB: r1: Reading flat sdR-r1-00200803.fit SDSSPROC: r1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r1: Selecting op file boss_pixbias-56859-r1.fits.gz SDSSPROC: r1: Read noise = 4.02013 3.18781 3.25277 3.30178 electrons FINDOPFILE: r1: Selecting op file pixflatave-56859-r1.fits.gz SDSSPROC: r1: Correcting with pixel flat pixflatave-56859-r1.fits.gz FINDOPFILE: r1: Selecting op file badpixels-56859-r1.fits.gz SDSSPROC: r1: Correcting with badpixels badpixels-56859-r1.fits.gz MDRP_CALIB: r1: Tracing fibers in sdR-r1-00200803.fit ML_MATCHMJD: r1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-02-56690.par MDRP_CCTRACEFIBERS: r1: Total Fibers: 709 MDRP_CCPEAKS: r1: Traces scaled by 1.00300 MDRP_CCPEAKS: r1: Traces shifted by -1.50000 ccd units MDRP_CCPEAKS: r1: Trace correlation = 0.95374745 MDRP_CCPEAKS: r1: THIS PASS: MDRP_CCPEAKS: r1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCPEAKS: r1: Number of peaks Found: 699 MDRP_CCPEAKS: r1: Number of Missing Fibers: 10 MDRP_CCPEAKS: r1: Number of missing edge fibers: 5 MDRP_CCPEAKS: r1: Number of missing interior fibers: 5 MDRP_CCTRACEFIBERS: r1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCTRACEFIBERS: r1: TOTAL MISSING FIBERS: 10 MDRP_CCTRACEFIBERS: r1: MISSING FIBERS (1-indexed): 149 206 230 231 285 381 485 544 563 613 MDRP_CCTRACEFIBERS: r1: MISSING PEAKS 1026 1304 1424 1429 1680 2143 2639 2942 3038 3286 MDRP_CCTRACEFIBERS: r1: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: r1: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: r1: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: r1: Warning: Fixing traces: 148 205 229 230 284 380 484 543 562 612 MDRP_CCTRACEFIBERS: r1: Fiber 148 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 205 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 229 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 230 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 284 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 380 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 484 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 543 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 562 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 612 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: r1: Fitting traces in sdR-r1-00200803.fit XY2TRACESET: r1: Total rejected = 69621 MDRP_CALIB: r1: Extracting flat with proftype= 1 EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 60 pixels MDRP_FITFLATWIDTH: r1: Median spatial widths = 1.02 0.96 1.10 1.04 pix (LL UL LR UR) ML_CCTWEAK: r1: Cross-correlating peaks up/down detector XY2TRACESET: r1: Total rejected = 52496 EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 58 pixels MDRP_FITFLATWIDTH: r1: Median spatial widths = 1.02 0.97 1.10 1.04 pix (LL UL LR UR) MDRP_CALIB: r1: Using proftype= 1 MDRP_CALIB: r1: Found 7 bright pixels in extracted flat sdR-r1-00200803.fit MDRP_CALIB: r1: GOOD FLAT!, sdR-r1-00200803.fit MDRP_CALIB: r1: Tracing flat # 2 of 2 MDRP_CALIB: r1: Reading flat sdR-r1-00200808.fit SDSSPROC: r1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r1: Selecting op file boss_pixbias-56859-r1.fits.gz SDSSPROC: r1: Read noise = 3.84823 3.32624 3.16300 3.30561 electrons FINDOPFILE: r1: Selecting op file pixflatave-56859-r1.fits.gz SDSSPROC: r1: Correcting with pixel flat pixflatave-56859-r1.fits.gz FINDOPFILE: r1: Selecting op file badpixels-56859-r1.fits.gz SDSSPROC: r1: Correcting with badpixels badpixels-56859-r1.fits.gz MDRP_CALIB: r1: Tracing fibers in sdR-r1-00200808.fit ML_MATCHMJD: r1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-02-56690.par MDRP_CCTRACEFIBERS: r1: Total Fibers: 709 MDRP_CCPEAKS: r1: Traces scaled by 1.00300 MDRP_CCPEAKS: r1: Traces shifted by -2.50000 ccd units MDRP_CCPEAKS: r1: Trace correlation = 0.95450796 MDRP_CCPEAKS: r1: THIS PASS: MDRP_CCPEAKS: r1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCPEAKS: r1: Number of peaks Found: 699 MDRP_CCPEAKS: r1: Number of Missing Fibers: 10 MDRP_CCPEAKS: r1: Number of missing edge fibers: 5 MDRP_CCPEAKS: r1: Number of missing interior fibers: 5 MDRP_CCTRACEFIBERS: r1: EXPECTED TOTAL NUMBER OF FIBERS: 709 MDRP_CCTRACEFIBERS: r1: TOTAL MISSING FIBERS: 10 MDRP_CCTRACEFIBERS: r1: MISSING FIBERS (1-indexed): 149 206 230 231 285 381 485 545 563 613 MDRP_CCTRACEFIBERS: r1: MISSING PEAKS 1025 1303 1423 1428 1679 2142 2638 2946 3037 3285 MDRP_CCTRACEFIBERS: r1: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: r1: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: r1: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: r1: Warning: Fixing traces: 148 205 229 230 284 380 484 544 562 612 MDRP_CCTRACEFIBERS: r1: Fiber 148 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 205 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 229 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 230 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 284 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 380 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 484 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 544 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 562 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Fiber 612 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r1: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: r1: Fitting traces in sdR-r1-00200808.fit XY2TRACESET: r1: Total rejected = 71576 MDRP_CALIB: r1: Extracting flat with proftype= 1 EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 105 pixels MDRP_FITFLATWIDTH: r1: Median spatial widths = 1.02 0.96 1.10 1.05 pix (LL UL LR UR) ML_CCTWEAK: r1: Cross-correlating peaks up/down detector XY2TRACESET: r1: Total rejected = 50113 EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 105 pixels MDRP_FITFLATWIDTH: r1: Median spatial widths = 1.02 0.97 1.10 1.05 pix (LL UL LR UR) MDRP_CALIB: r1: Using proftype= 1 MDRP_CALIB: r1: Found 4 bright pixels in extracted flat sdR-r1-00200808.fit MDRP_CALIB: r1: GOOD FLAT!, sdR-r1-00200808.fit MDRP_CALIB: r1: LOOP THROUGH ARCS------------------------- MDRP_CALIB: r1: Extracting arc # 1 of 2 MDRP_CALIB: r1: Reading arc sdR-r1-00200804.fit SDSSPROC: r1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r1: Selecting op file boss_pixbias-56859-r1.fits.gz SDSSPROC: r1: Read noise = 4.03168 3.18858 3.24247 3.28751 electrons FINDOPFILE: r1: Selecting op file pixflatave-56859-r1.fits.gz SDSSPROC: r1: Correcting with pixel flat pixflatave-56859-r1.fits.gz FINDOPFILE: r1: Selecting op file badpixels-56859-r1.fits.gz SDSSPROC: r1: Correcting with badpixels badpixels-56859-r1.fits.gz MDRP_CALIB: r1: Fraction of bad pixels in arc = 0.000350182 MDRP_CALIB: r1: Arc sdR-r1-00200804.fit paired with flat sdR-r1-00200803.fit MDRP_MATCH_TRACE: r1: Iteration: 0 Pixels Rejected: 53495 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 1 Pixels Rejected: 1284 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 2 Pixels Rejected: 461 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 3 Pixels Rejected: 208 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 4 Pixels Rejected: 68 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 5 Pixels Rejected: 36 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 6 Pixels Rejected: 22 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 7 Pixels Rejected: 5 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 8 Pixels Rejected: 3 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 9 Pixels Rejected: 2 Finished? 0 MDRP_MATCH_TRACE: r1: Warning: Large number of pixels rejected! 55584 MDRP_CALIB: r1: Shifting traces with match_trace 0.0205078 MDRP_CALIB: r1: Extracting arc EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 82 pixels MDRP_CALIB: r1: Setting 2-phase readout flag MDRP_CALIB: r1: Searching for initial wavelength solution MDRP_FITARCIMAGE: r1: Setting ncoeff= 5 MDRP_FITARCIMAGE: r1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: r1: Combining rows 352 to 356 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16585 -0.01879 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16588 -0.01891 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.771421 MDRP_FITARCIMAGE: r1: Best correlation = 0.771421 MDRP_FITARCIMAGE: r1: ASET = 3.89327 0.16588 -0.01891 0.00123 -0.00001 -0.00002 MDRP_CALIB: r1: Searching for wavelength solution MDRP_FITARCIMAGE: r1: Setting ncoeff= 6 MDRP_FITARCIMAGE: r1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89494 0.16331 -0.01856 0.00118 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89502 0.16355 -0.01843 0.00122 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.765927 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89462 0.16381 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89470 0.16378 -0.01862 0.00121 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.771403 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89447 0.16427 -0.01857 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89431 0.16406 -0.01870 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.766520 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89415 0.16438 -0.01864 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89415 0.16438 -0.01870 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768025 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89399 0.16483 -0.01865 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89391 0.16486 -0.01877 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767305 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89367 0.16494 -0.01884 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89367 0.16494 -0.01890 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767802 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89367 0.16534 -0.01872 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89359 0.16537 -0.01884 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767128 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16545 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89343 0.16542 -0.01891 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767701 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16545 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16547 -0.01897 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767851 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16585 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16561 -0.01897 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768510 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89319 0.16550 -0.01886 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89319 0.16577 -0.01898 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.766885 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89319 0.16550 -0.01886 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16574 -0.01891 0.00117 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767352 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89319 0.16550 -0.01886 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16574 -0.01897 0.00121 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768441 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16545 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89335 0.16571 -0.01897 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767812 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16545 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89335 0.16545 -0.01897 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767824 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89351 0.16539 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89351 0.16539 -0.01897 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769548 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89367 0.16534 -0.01884 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89367 0.16507 -0.01890 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768524 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89399 0.16483 -0.01871 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89391 0.16486 -0.01883 0.00121 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768142 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89415 0.16477 -0.01882 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89415 0.16477 -0.01882 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767387 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89447 0.16427 -0.01857 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89439 0.16430 -0.01870 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.770475 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89479 0.16416 -0.01856 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89471 0.16392 -0.01868 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.771920 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89510 0.16366 -0.01855 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89502 0.16368 -0.01861 0.00122 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.773086 XY2TRACESET: r1: Total rejected = 0 MDRP_FITARCIMAGE: r1: Iterating flux-weighted centers MDRP_FITARCIMAGE: r1: Discarding line 61, at 9657.7860 Ang: RMS= 1.2268357 pix MDRP_FITARCIMAGE: r1: Discarding line 63, at 9784.5030 Ang: RMS= 0.31909824 pix MDRP_FITARCIMAGE: r1: Number of arc lines: 63 MDRP_FITARCIMAGE: r1: Iteration 0 XY2TRACESET: r1: Total rejected = 8044 MDRP_FITARCIMAGE: r1: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: r1: Iteration 1 XY2TRACESET: r1: Total rejected = 7994 MDRP_FITARCIMAGE: r1: Rejecting line at 5400.5616 Ang MDRP_FITARCIMAGE: r1: Iteration 2 XY2TRACESET: r1: Total rejected = 7960 MDRP_FITARCIMAGE: r1: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: r1: Iteration 3 XY2TRACESET: r1: Total rejected = 7885 MDRP_FITARCIMAGE: r1: Rejecting line at 5689.8163 Ang MDRP_FITARCIMAGE: r1: Iteration 4 XY2TRACESET: r1: Total rejected = 7801 MDRP_FITARCIMAGE: r1: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: r1: Iteration 5 XY2TRACESET: r1: Total rejected = 7683 MDRP_FITARCIMAGE: r1: Rejecting line at 5820.1558 Ang MDRP_FITARCIMAGE: r1: Iteration 6 XY2TRACESET: r1: Total rejected = 7664 MDRP_FITARCIMAGE: r1: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: r1: Iteration 7 XY2TRACESET: r1: Total rejected = 7668 MDRP_FITARCIMAGE: r1: Rejecting line at 7514.6518 Ang MDRP_FITARCIMAGE: r1: Iteration 8 XY2TRACESET: r1: Total rejected = 7675 MDRP_FITARCIMAGE: r1: Rejecting line at 7503.8691 Ang MDRP_FITARCIMAGE: r1: Iteration 9 XY2TRACESET: r1: Total rejected = 7714 MDRP_FITARCIMAGE: r1: Rejecting line at 8521.4422 Ang MDRP_FITARCIMAGE: r1: Iteration 10 XY2TRACESET: r1: Total rejected = 7699 MDRP_FITARCIMAGE: r1: Rejecting line at 8014.7860 Ang MDRP_FITARCIMAGE: r1: Iteration 11 XY2TRACESET: r1: Total rejected = 7703 MDRP_FITARCIMAGE: r1: Iterations done XY2TRACESET: r1: Total rejected = 7640 XY2TRACESET: r1: Total rejected = 0 XY2TRACESET: r1: Total rejected = 0 XY2TRACESET: r1: Total rejected = 0 MDRP_FITARCIMAGE: r1: Line 0 5400.5616 1.19242e-05 Reject MDRP_FITARCIMAGE: r1: Line 1 5460.7530 4.81413e-06 MDRP_FITARCIMAGE: r1: Line 2 5656.6588 1.13752e-05 Reject MDRP_FITARCIMAGE: r1: Line 3 5675.8600 1.18554e-05 Reject MDRP_FITARCIMAGE: r1: Line 4 5689.8163 1.09522e-05 Reject MDRP_FITARCIMAGE: r1: Line 5 5719.5300 1.17953e-05 Reject MDRP_FITARCIMAGE: r1: Line 6 5769.5980 3.13743e-06 MDRP_FITARCIMAGE: r1: Line 7 5790.6630 2.69021e-06 MDRP_FITARCIMAGE: r1: Line 8 5820.1558 1.17568e-05 Reject MDRP_FITARCIMAGE: r1: Line 9 5852.4880 2.13254e-06 MDRP_FITARCIMAGE: r1: Line 10 5881.8950 1.89911e-06 MDRP_FITARCIMAGE: r1: Line 11 5944.8340 1.35173e-06 MDRP_FITARCIMAGE: r1: Line 12 5965.4710 1.17860e-05 Reject MDRP_FITARCIMAGE: r1: Line 13 6029.9970 1.39870e-06 MDRP_FITARCIMAGE: r1: Line 14 6074.3380 1.03292e-06 MDRP_FITARCIMAGE: r1: Line 15 6096.1630 1.05221e-06 MDRP_FITARCIMAGE: r1: Line 16 6143.0630 6.41187e-07 MDRP_FITARCIMAGE: r1: Line 17 6163.5940 8.80079e-07 MDRP_FITARCIMAGE: r1: Line 18 6217.2810 1.44048e-06 MDRP_FITARCIMAGE: r1: Line 19 6266.4950 9.14550e-07 MDRP_FITARCIMAGE: r1: Line 20 6304.7890 1.17788e-06 MDRP_FITARCIMAGE: r1: Line 21 6334.4280 1.45268e-06 MDRP_FITARCIMAGE: r1: Line 22 6382.9920 1.88801e-06 MDRP_FITARCIMAGE: r1: Line 23 6402.2460 2.13603e-06 MDRP_FITARCIMAGE: r1: Line 24 6438.4700 7.39900e-07 MDRP_FITARCIMAGE: r1: Line 25 6506.5280 2.92965e-06 MDRP_FITARCIMAGE: r1: Line 26 6532.8820 2.97059e-06 MDRP_FITARCIMAGE: r1: Line 27 6598.9530 2.81960e-06 MDRP_FITARCIMAGE: r1: Line 28 6717.0430 3.13814e-06 MDRP_FITARCIMAGE: r1: Line 29 6929.4670 2.50812e-06 MDRP_FITARCIMAGE: r1: Line 30 7032.4128 1.92262e-06 MDRP_FITARCIMAGE: r1: Line 31 7173.9380 1.07882e-06 MDRP_FITARCIMAGE: r1: Line 32 7245.1670 1.07725e-06 MDRP_FITARCIMAGE: r1: Line 33 7438.9000 3.63011e-06 MDRP_FITARCIMAGE: r1: Line 34 7488.8710 4.62964e-06 MDRP_FITARCIMAGE: r1: Line 35 7503.8691 1.05778e-05 Reject MDRP_FITARCIMAGE: r1: Line 36 7514.6518 1.11502e-05 Reject MDRP_FITARCIMAGE: r1: Line 37 7535.7740 6.03322e-06 MDRP_FITARCIMAGE: r1: Line 38 7635.1060 7.54647e-06 MDRP_FITARCIMAGE: r1: Line 39 8014.7860 1.04451e-05 Reject MDRP_FITARCIMAGE: r1: Line 40 8103.6930 9.88840e-06 MDRP_FITARCIMAGE: r1: Line 41 8300.3260 2.62369e-06 MDRP_FITARCIMAGE: r1: Line 42 8377.6065 7.30044e-06 MDRP_FITARCIMAGE: r1: Line 43 8408.2096 9.42921e-06 MDRP_FITARCIMAGE: r1: Line 44 8495.3598 3.43741e-06 MDRP_FITARCIMAGE: r1: Line 45 8521.4422 1.15631e-05 Reject MDRP_FITARCIMAGE: r1: Line 46 8591.2583 2.64822e-06 MDRP_FITARCIMAGE: r1: Line 47 8634.6470 1.69935e-06 MDRP_FITARCIMAGE: r1: Line 48 8654.3831 2.08658e-06 MDRP_FITARCIMAGE: r1: Line 49 8853.8670 1.49182e-06 MDRP_FITARCIMAGE: r1: Line 50 8919.5007 2.06186e-06 MDRP_FITARCIMAGE: r1: Line 51 9122.9674 9.78580e-06 MDRP_FITARCIMAGE: r1: Line 52 9201.7590 2.12058e-06 MDRP_FITARCIMAGE: r1: Line 53 9300.8530 2.29732e-06 MDRP_FITARCIMAGE: r1: Line 54 9313.1386 6.39410e-06 MDRP_FITARCIMAGE: r1: Line 55 9326.5070 3.02889e-06 MDRP_FITARCIMAGE: r1: Line 56 9425.3790 3.09221e-06 MDRP_FITARCIMAGE: r1: Line 57 9459.2100 4.89181e-06 MDRP_FITARCIMAGE: r1: Line 58 9486.6800 4.53118e-06 MDRP_FITARCIMAGE: r1: Line 59 9534.1630 3.31631e-06 MDRP_FITARCIMAGE: r1: Line 60 9547.4000 5.30817e-06 MDRP_FITARCIMAGE: r1: Line 61 9657.7860 1.10579e-05 Reject-RMS MDRP_FITARCIMAGE: r1: Line 62 9665.4240 2.80999e-06 MDRP_FITARCIMAGE: r1: Line 63 9784.5030 1.13859e-05 Reject-RMS MDRP_FITARCIMAGE: r1: Line 64 10139.750 9.67175e-07 XY2TRACESET: r1: Total rejected = 0 MDRP_FITARCIMAGE: r1: Time 131. seconds elapsed MDRP_CALIB: r1: Number of Rejected lamp lines: 1 out of 45 lamp lines EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 13714 pixels XY2TRACESET: r1: Total rejected = 3071 MDRP_FITDISPERSION: r1: Median wavelength widths = 1.05 1.01 1.04 1.01 pix (L B T R) MDRP_CALIB: r1: GOOD ARC!, sdR-r1-00200804.fit MDRP_CALIB: r1: Extracting arc # 2 of 2 MDRP_CALIB: r1: Reading arc sdR-r1-00200807.fit SDSSPROC: r1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r1: Selecting op file boss_pixbias-56859-r1.fits.gz SDSSPROC: r1: Read noise = 3.86946 3.30524 3.15969 3.30332 electrons FINDOPFILE: r1: Selecting op file pixflatave-56859-r1.fits.gz SDSSPROC: r1: Correcting with pixel flat pixflatave-56859-r1.fits.gz FINDOPFILE: r1: Selecting op file badpixels-56859-r1.fits.gz SDSSPROC: r1: Correcting with badpixels badpixels-56859-r1.fits.gz MDRP_CALIB: r1: Fraction of bad pixels in arc = 0.000532545 MDRP_CALIB: r1: Arc sdR-r1-00200807.fit paired with flat sdR-r1-00200808.fit MDRP_MATCH_TRACE: r1: Iteration: 0 Pixels Rejected: 53742 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 1 Pixels Rejected: 1198 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 2 Pixels Rejected: 489 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 3 Pixels Rejected: 200 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 4 Pixels Rejected: 88 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 5 Pixels Rejected: 42 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 6 Pixels Rejected: 10 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 7 Pixels Rejected: 4 Finished? 0 MDRP_MATCH_TRACE: r1: Iteration: 8 Pixels Rejected: 0 Finished? 1 MDRP_MATCH_TRACE: r1: Warning: Large number of pixels rejected! 55773 MDRP_CALIB: r1: Shifting traces with match_trace -0.00585938 MDRP_CALIB: r1: Extracting arc EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 174 pixels MDRP_CALIB: r1: Setting 2-phase readout flag MDRP_CALIB: r1: Searching for initial wavelength solution MDRP_FITARCIMAGE: r1: Setting ncoeff= 5 MDRP_FITARCIMAGE: r1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: r1: Combining rows 352 to 356 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89319 0.16590 -0.01886 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89319 0.16564 -0.01898 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.773206 MDRP_FITARCIMAGE: r1: Best correlation = 0.773206 MDRP_FITARCIMAGE: r1: ASET = 3.89319 0.16564 -0.01898 0.00115 -0.00001 -0.00002 MDRP_CALIB: r1: Searching for wavelength solution MDRP_FITARCIMAGE: r1: Setting ncoeff= 6 MDRP_FITARCIMAGE: r1: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89494 0.16331 -0.01856 0.00118 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89494 0.16358 -0.01850 0.00122 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767592 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89462 0.16382 -0.01863 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89462 0.16382 -0.01863 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.771254 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89431 0.16432 -0.01876 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89431 0.16405 -0.01864 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768705 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89399 0.16443 -0.01883 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89407 0.16440 -0.01877 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769300 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89383 0.16488 -0.01883 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89383 0.16488 -0.01889 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767302 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89367 0.16494 -0.01878 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89367 0.16494 -0.01884 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767325 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89351 0.16539 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89351 0.16513 -0.01891 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.773082 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16545 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89335 0.16545 -0.01897 0.00121 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769870 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89319 0.16550 -0.01886 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16547 -0.01891 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767173 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89319 0.16550 -0.01886 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16574 -0.01891 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768131 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89319 0.16590 -0.01886 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89319 0.16564 -0.01898 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.767652 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89319 0.16550 -0.01886 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89319 0.16577 -0.01898 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769949 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89319 0.16550 -0.01886 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89319 0.16577 -0.01898 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768194 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16585 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 186 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16561 -0.01897 0.00121 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769180 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89335 0.16545 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89327 0.16547 -0.01897 0.00119 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768257 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89351 0.16539 -0.01885 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89351 0.16539 -0.01891 0.00121 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769928 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89367 0.16534 -0.01884 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -187 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89359 0.16510 -0.01896 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.768008 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89399 0.16483 -0.01865 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89391 0.16486 -0.01877 0.00117 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.769242 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89415 0.16477 -0.01876 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 187 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89415 0.16477 -0.01876 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.770159 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89431 0.16432 -0.01882 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -188 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89439 0.16429 -0.01876 0.00115 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.770553 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89462 0.16381 -0.01869 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 188 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89470 0.16405 -0.01862 0.00123 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.774462 XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r1: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Searching about coefficients = 3.89510 0.16366 -0.01855 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r1: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r1: Total rejected = 0 ARCFIT_GUESS: r1: Initial wavelength fit = 3.89502 0.16368 -0.01855 0.00122 -0.00001 -0.00002 ARCFIT_GUESS: r1: Initial correlation = 0.774266 XY2TRACESET: r1: Total rejected = 0 MDRP_FITARCIMAGE: r1: Iterating flux-weighted centers MDRP_FITARCIMAGE: r1: Discarding line 61, at 9657.7860 Ang: RMS= 1.1573684 pix MDRP_FITARCIMAGE: r1: Discarding line 63, at 9784.5030 Ang: RMS= 0.32414947 pix MDRP_FITARCIMAGE: r1: Number of arc lines: 63 MDRP_FITARCIMAGE: r1: Iteration 0 XY2TRACESET: r1: Total rejected = 7817 MDRP_FITARCIMAGE: r1: Rejecting line at 5400.5616 Ang MDRP_FITARCIMAGE: r1: Iteration 1 XY2TRACESET: r1: Total rejected = 7772 MDRP_FITARCIMAGE: r1: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: r1: Iteration 2 XY2TRACESET: r1: Total rejected = 7682 MDRP_FITARCIMAGE: r1: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: r1: Iteration 3 XY2TRACESET: r1: Total rejected = 7619 MDRP_FITARCIMAGE: r1: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: r1: Iteration 4 XY2TRACESET: r1: Total rejected = 7564 MDRP_FITARCIMAGE: r1: Rejecting line at 5689.8163 Ang MDRP_FITARCIMAGE: r1: Iteration 5 XY2TRACESET: r1: Total rejected = 7497 MDRP_FITARCIMAGE: r1: Rejecting line at 5820.1558 Ang MDRP_FITARCIMAGE: r1: Iteration 6 XY2TRACESET: r1: Total rejected = 7438 MDRP_FITARCIMAGE: r1: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: r1: Iteration 7 XY2TRACESET: r1: Total rejected = 7434 MDRP_FITARCIMAGE: r1: Rejecting line at 7503.8691 Ang MDRP_FITARCIMAGE: r1: Iteration 8 XY2TRACESET: r1: Total rejected = 7454 MDRP_FITARCIMAGE: r1: Rejecting line at 7514.6518 Ang MDRP_FITARCIMAGE: r1: Iteration 9 XY2TRACESET: r1: Total rejected = 7472 MDRP_FITARCIMAGE: r1: Rejecting line at 8521.4422 Ang MDRP_FITARCIMAGE: r1: Iteration 10 XY2TRACESET: r1: Total rejected = 7471 MDRP_FITARCIMAGE: r1: Rejecting line at 8014.7860 Ang MDRP_FITARCIMAGE: r1: Iteration 11 XY2TRACESET: r1: Total rejected = 7484 MDRP_FITARCIMAGE: r1: Iterations done XY2TRACESET: r1: Total rejected = 7423 XY2TRACESET: r1: Total rejected = 0 XY2TRACESET: r1: Total rejected = 0 XY2TRACESET: r1: Total rejected = 0 MDRP_FITARCIMAGE: r1: Line 0 5400.5616 1.14231e-05 Reject MDRP_FITARCIMAGE: r1: Line 1 5460.7530 5.10897e-06 MDRP_FITARCIMAGE: r1: Line 2 5656.6588 1.10183e-05 Reject MDRP_FITARCIMAGE: r1: Line 3 5675.8600 1.17113e-05 Reject MDRP_FITARCIMAGE: r1: Line 4 5689.8163 1.05739e-05 Reject MDRP_FITARCIMAGE: r1: Line 5 5719.5300 1.28028e-05 Reject MDRP_FITARCIMAGE: r1: Line 6 5769.5980 3.53800e-06 MDRP_FITARCIMAGE: r1: Line 7 5790.6630 2.75899e-06 MDRP_FITARCIMAGE: r1: Line 8 5820.1558 1.20838e-05 Reject MDRP_FITARCIMAGE: r1: Line 9 5852.4880 2.04282e-06 MDRP_FITARCIMAGE: r1: Line 10 5881.8950 1.88633e-06 MDRP_FITARCIMAGE: r1: Line 11 5944.8340 1.31876e-06 MDRP_FITARCIMAGE: r1: Line 12 5965.4710 1.11315e-05 Reject MDRP_FITARCIMAGE: r1: Line 13 6029.9970 1.25765e-06 MDRP_FITARCIMAGE: r1: Line 14 6074.3380 1.03624e-06 MDRP_FITARCIMAGE: r1: Line 15 6096.1630 9.57916e-07 MDRP_FITARCIMAGE: r1: Line 16 6143.0630 6.57935e-07 MDRP_FITARCIMAGE: r1: Line 17 6163.5940 8.47890e-07 MDRP_FITARCIMAGE: r1: Line 18 6217.2810 1.42622e-06 MDRP_FITARCIMAGE: r1: Line 19 6266.4950 8.49920e-07 MDRP_FITARCIMAGE: r1: Line 20 6304.7890 1.22667e-06 MDRP_FITARCIMAGE: r1: Line 21 6334.4280 1.55495e-06 MDRP_FITARCIMAGE: r1: Line 22 6382.9920 1.92457e-06 MDRP_FITARCIMAGE: r1: Line 23 6402.2460 1.90404e-06 MDRP_FITARCIMAGE: r1: Line 24 6438.4700 7.35143e-07 MDRP_FITARCIMAGE: r1: Line 25 6506.5280 2.85694e-06 MDRP_FITARCIMAGE: r1: Line 26 6532.8820 3.09756e-06 MDRP_FITARCIMAGE: r1: Line 27 6598.9530 2.82670e-06 MDRP_FITARCIMAGE: r1: Line 28 6717.0430 3.19494e-06 MDRP_FITARCIMAGE: r1: Line 29 6929.4670 2.46016e-06 MDRP_FITARCIMAGE: r1: Line 30 7032.4128 1.77968e-06 MDRP_FITARCIMAGE: r1: Line 31 7173.9380 1.02012e-06 MDRP_FITARCIMAGE: r1: Line 32 7245.1670 9.68489e-07 MDRP_FITARCIMAGE: r1: Line 33 7438.9000 3.69591e-06 MDRP_FITARCIMAGE: r1: Line 34 7488.8710 4.75180e-06 MDRP_FITARCIMAGE: r1: Line 35 7503.8691 1.13835e-05 Reject MDRP_FITARCIMAGE: r1: Line 36 7514.6518 1.09429e-05 Reject MDRP_FITARCIMAGE: r1: Line 37 7535.7740 6.00745e-06 MDRP_FITARCIMAGE: r1: Line 38 7635.1060 7.05059e-06 MDRP_FITARCIMAGE: r1: Line 39 8014.7860 1.08544e-05 Reject MDRP_FITARCIMAGE: r1: Line 40 8103.6930 9.10076e-06 MDRP_FITARCIMAGE: r1: Line 41 8300.3260 2.51615e-06 MDRP_FITARCIMAGE: r1: Line 42 8377.6065 6.84260e-06 MDRP_FITARCIMAGE: r1: Line 43 8408.2096 9.34376e-06 MDRP_FITARCIMAGE: r1: Line 44 8495.3598 3.16886e-06 MDRP_FITARCIMAGE: r1: Line 45 8521.4422 1.12176e-05 Reject MDRP_FITARCIMAGE: r1: Line 46 8591.2583 2.32853e-06 MDRP_FITARCIMAGE: r1: Line 47 8634.6470 1.63713e-06 MDRP_FITARCIMAGE: r1: Line 48 8654.3831 2.14193e-06 MDRP_FITARCIMAGE: r1: Line 49 8853.8670 1.55963e-06 MDRP_FITARCIMAGE: r1: Line 50 8919.5007 2.08689e-06 MDRP_FITARCIMAGE: r1: Line 51 9122.9674 8.64620e-06 MDRP_FITARCIMAGE: r1: Line 52 9201.7590 2.15348e-06 MDRP_FITARCIMAGE: r1: Line 53 9300.8530 2.45907e-06 MDRP_FITARCIMAGE: r1: Line 54 9313.1386 5.83362e-06 MDRP_FITARCIMAGE: r1: Line 55 9326.5070 3.08268e-06 MDRP_FITARCIMAGE: r1: Line 56 9425.3790 3.28725e-06 MDRP_FITARCIMAGE: r1: Line 57 9459.2100 4.39237e-06 MDRP_FITARCIMAGE: r1: Line 58 9486.6800 4.53112e-06 MDRP_FITARCIMAGE: r1: Line 59 9534.1630 3.17998e-06 MDRP_FITARCIMAGE: r1: Line 60 9547.4000 5.23163e-06 MDRP_FITARCIMAGE: r1: Line 61 9657.7860 1.05811e-05 Reject-RMS MDRP_FITARCIMAGE: r1: Line 62 9665.4240 2.80067e-06 MDRP_FITARCIMAGE: r1: Line 63 9784.5030 1.03493e-05 Reject-RMS MDRP_FITARCIMAGE: r1: Line 64 10139.750 9.46432e-07 XY2TRACESET: r1: Total rejected = 0 MDRP_FITARCIMAGE: r1: Time 128. seconds elapsed MDRP_CALIB: r1: Number of Rejected lamp lines: 1 out of 45 lamp lines EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 13633 pixels XY2TRACESET: r1: Total rejected = 2404 MDRP_FITDISPERSION: r1: Median wavelength widths = 1.05 1.01 1.03 1.01 pix (L B T R) MDRP_CALIB: r1: GOOD ARC!, sdR-r1-00200807.fit MDRP_CALIB: r1: CREATING FIBERFLATS---------------------- MDRP_CALIB: r1: Create fiberflats for flat # 1 of 2 MDRP_CALIB: r1: Flat sdR-r1-00200803.fit paired with arc sdR-r1-00200804.fit MDRP_CALIB: r1: Reading flat sdR-r1-00200803.fit SDSSPROC: r1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r1: Selecting op file boss_pixbias-56859-r1.fits.gz SDSSPROC: r1: Read noise = 4.02013 3.18781 3.25277 3.30178 electrons FINDOPFILE: r1: Selecting op file pixflatave-56859-r1.fits.gz SDSSPROC: r1: Correcting with pixel flat pixflatave-56859-r1.fits.gz FINDOPFILE: r1: Selecting op file badpixels-56859-r1.fits.gz SDSSPROC: r1: Correcting with badpixels badpixels-56859-r1.fits.gz EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 256 pixels MDRP_SUPERFLAT: r1: Wavelength range = 5151.0603 10346.813 MDRP_SUPERFLAT: r1: Creating superflat from 689 fibers MDRP_FIBERFLAT: r1: Number of fiberflat points LE 0 = 739326 ML_QAIFUFLAT: r1: Normalizing to 4th highest value of 1.05467 ML_MATCHMJD: r1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart02/56895 MDRP_CALIB: r1: Create fiberflats for flat # 2 of 2 MDRP_CALIB: r1: Flat sdR-r1-00200808.fit paired with arc sdR-r1-00200807.fit MDRP_CALIB: r1: Reading flat sdR-r1-00200808.fit SDSSPROC: r1: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r1: Selecting op file boss_pixbias-56859-r1.fits.gz SDSSPROC: r1: Read noise = 3.84823 3.32624 3.16300 3.30561 electrons FINDOPFILE: r1: Selecting op file pixflatave-56859-r1.fits.gz SDSSPROC: r1: Correcting with pixel flat pixflatave-56859-r1.fits.gz FINDOPFILE: r1: Selecting op file badpixels-56859-r1.fits.gz SDSSPROC: r1: Correcting with badpixels badpixels-56859-r1.fits.gz EXTRACT_IMAGE: r1: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r1: masked 343 pixels MDRP_SUPERFLAT: r1: Wavelength range = 5150.4974 10346.431 MDRP_SUPERFLAT: r1: Creating superflat from 688 fibers MDRP_FIBERFLAT: r1: Number of fiberflat points LE 0 = 739234 ML_QAIFUFLAT: r1: Normalizing to 4th highest value of 1.06167 ML_MATCHMJD: r1: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart02/56895 MDRP_CALIB: r1: Writing calibration structure /uufs/chpc.utah.edu/common/home/sdss03/mangawork/manga/spectro/redux/v1_5_4/8330/57179/calibstruct-r1.sav MDRP_CALIB: r1: Elapsed time = 1773. seconds MDRP_REDUCE: r1: FINISHED CALIBRATION--------------- MDRP_REDUCE: r1: CALIB KEYWORD SET. SKIPPING SCIENCE AND ONLY REDUCING CALIBRATION FILES! MDRP_REDUCE: Elapsed time = 1774. seconds MDRP_REDUCE2D: Error. No science extractions were done. Problem with calibration files for camera r1 MDRP_REDUCE2D: Continuing with next camera ML_READSLITMAP: b2: Reading slitmap from /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/slitmaps/0083XX/8330/slitmap-8330-57179-02.par MDRP_REDUCE: b2: STARTING CALIBRATION--------------- MDRP_CALIB: b2: LOOP THROUGH FLATS----------------------------- MDRP_CALIB: b2: Tracing flat # 1 of 2 MDRP_CALIB: b2: Reading flat sdR-b2-00200803.fit SDSSPROC: b2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b2: Selecting op file boss_pixbias-56859-b2.fits.gz BOLTON_BIASSUB: b2: Doing row-by-row bias for b2 crazy quadrant. SDSSPROC: b2: Read noise = 2.10487 2.13090 2.04930 1.83956 electrons FINDOPFILE: b2: Selecting op file pixflatave-55056-b2.fits.gz SDSSPROC: b2: Correcting with pixel flat pixflatave-55056-b2.fits.gz FINDOPFILE: b2: Selecting op file badpixels-56149-b2.fits.gz SDSSPROC: b2: Correcting with badpixels badpixels-56149-b2.fits.gz MDRP_CALIB: b2: Tracing fibers in sdR-b2-00200803.fit ML_MATCHMJD: b2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-02-56690.par MDRP_CCTRACEFIBERS: b2: Total Fibers: 714 MDRP_CCPEAKS: b2: Traces scaled by 1.00350 MDRP_CCPEAKS: b2: Traces shifted by -6.20000 ccd units MDRP_CCPEAKS: b2: Trace correlation = 0.958824 MDRP_CCPEAKS: b2: THIS PASS: MDRP_CCPEAKS: b2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCPEAKS: b2: Number of peaks Found: 707 MDRP_CCPEAKS: b2: Number of Missing Fibers: 7 MDRP_CCPEAKS: b2: Number of missing edge fibers: 4 MDRP_CCPEAKS: b2: Number of missing interior fibers: 3 MDRP_CCTRACEFIBERS: b2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCTRACEFIBERS: b2: TOTAL MISSING FIBERS: 7 MDRP_CCTRACEFIBERS: b2: MISSING FIBERS (1-indexed): 313 342 387 417 491 585 714 MDRP_CCTRACEFIBERS: b2: MISSING PEAKS 1825 1966 2177 2322 2687 3144 3771 MDRP_CCTRACEFIBERS: b2: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: b2: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: b2: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: b2: Warning: Fixing traces: 312 341 386 416 490 584 713 MDRP_CCTRACEFIBERS: b2: Fiber 312 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 341 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 386 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 416 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 490 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 584 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 713 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: b2: Fitting traces in sdR-b2-00200803.fit XY2TRACESET: b2: Total rejected = 468850 MDRP_CALIB: b2: Extracting flat with proftype= 1 EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 2 pixels MDRP_FITFLATWIDTH: b2: Median spatial widths = 0.95 0.94 1.01 0.97 pix (LL UL LR UR) ML_CCTWEAK: b2: Cross-correlating peaks up/down detector XY2TRACESET: b2: Total rejected = 368407 EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 2 pixels MDRP_FITFLATWIDTH: b2: Median spatial widths = 0.95 0.94 1.01 0.97 pix (LL UL LR UR) MDRP_CALIB: b2: Using proftype= 1 MDRP_CALIB: b2: Found 0 bright pixels in extracted flat sdR-b2-00200803.fit MDRP_CALIB: b2: GOOD FLAT!, sdR-b2-00200803.fit MDRP_CALIB: b2: Tracing flat # 2 of 2 MDRP_CALIB: b2: Reading flat sdR-b2-00200808.fit SDSSPROC: b2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b2: Selecting op file boss_pixbias-56859-b2.fits.gz BOLTON_BIASSUB: b2: Doing row-by-row bias for b2 crazy quadrant. SDSSPROC: b2: Read noise = 2.01556 2.13493 2.04313 1.83206 electrons FINDOPFILE: b2: Selecting op file pixflatave-55056-b2.fits.gz SDSSPROC: b2: Correcting with pixel flat pixflatave-55056-b2.fits.gz FINDOPFILE: b2: Selecting op file badpixels-56149-b2.fits.gz SDSSPROC: b2: Correcting with badpixels badpixels-56149-b2.fits.gz MDRP_CALIB: b2: Tracing fibers in sdR-b2-00200808.fit ML_MATCHMJD: b2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-02-56690.par MDRP_CCTRACEFIBERS: b2: Total Fibers: 714 MDRP_CCPEAKS: b2: Traces scaled by 1.00300 MDRP_CCPEAKS: b2: Traces shifted by -6.70000 ccd units MDRP_CCPEAKS: b2: Trace correlation = 0.958639 MDRP_CCPEAKS: b2: THIS PASS: MDRP_CCPEAKS: b2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCPEAKS: b2: Number of peaks Found: 708 MDRP_CCPEAKS: b2: Number of Missing Fibers: 6 MDRP_CCPEAKS: b2: Number of missing edge fibers: 4 MDRP_CCPEAKS: b2: Number of missing interior fibers: 2 MDRP_CCTRACEFIBERS: b2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCTRACEFIBERS: b2: TOTAL MISSING FIBERS: 6 MDRP_CCTRACEFIBERS: b2: MISSING FIBERS (1-indexed): 342 387 417 491 585 714 MDRP_CCTRACEFIBERS: b2: MISSING PEAKS 1965 2176 2320 2685 3142 3769 MDRP_CCTRACEFIBERS: b2: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: b2: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: b2: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: b2: Warning: Fixing traces: 341 386 416 490 584 713 MDRP_CCTRACEFIBERS: b2: Fiber 341 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 386 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 416 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 490 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 584 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Fiber 713 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: b2: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: b2: Fitting traces in sdR-b2-00200808.fit XY2TRACESET: b2: Total rejected = 466272 MDRP_CALIB: b2: Extracting flat with proftype= 1 EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 5 pixels MDRP_FITFLATWIDTH: b2: Median spatial widths = 0.96 0.97 1.01 0.99 pix (LL UL LR UR) ML_CCTWEAK: b2: Cross-correlating peaks up/down detector XY2TRACESET: b2: Total rejected = 378928 EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 5 pixels MDRP_FITFLATWIDTH: b2: Median spatial widths = 0.96 0.97 1.01 0.99 pix (LL UL LR UR) MDRP_CALIB: b2: Using proftype= 1 MDRP_CALIB: b2: Found 0 bright pixels in extracted flat sdR-b2-00200808.fit MDRP_CALIB: b2: GOOD FLAT!, sdR-b2-00200808.fit MDRP_CALIB: b2: LOOP THROUGH ARCS------------------------- MDRP_CALIB: b2: Extracting arc # 1 of 2 MDRP_CALIB: b2: Reading arc sdR-b2-00200804.fit SDSSPROC: b2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b2: Selecting op file boss_pixbias-56859-b2.fits.gz BOLTON_BIASSUB: b2: Doing row-by-row bias for b2 crazy quadrant. SDSSPROC: b2: Read noise = 2.06500 2.08605 2.01943 1.82309 electrons FINDOPFILE: b2: Selecting op file pixflatave-55056-b2.fits.gz SDSSPROC: b2: Correcting with pixel flat pixflatave-55056-b2.fits.gz FINDOPFILE: b2: Selecting op file badpixels-56149-b2.fits.gz SDSSPROC: b2: Correcting with badpixels badpixels-56149-b2.fits.gz MDRP_CALIB: b2: Fraction of bad pixels in arc = 5.40292e-05 MDRP_CALIB: b2: Arc sdR-b2-00200804.fit paired with flat sdR-b2-00200803.fit MDRP_MATCH_TRACE: b2: Iteration: 0 Pixels Rejected: 23477 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 1 Pixels Rejected: 453 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 2 Pixels Rejected: 105 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 3 Pixels Rejected: 27 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 4 Pixels Rejected: 7 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 5 Pixels Rejected: 4 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 6 Pixels Rejected: 0 Finished? 1 MDRP_MATCH_TRACE: b2: Warning: Large number of pixels rejected! 24073 MDRP_CALIB: b2: Shifting traces with match_trace 0.0456543 MDRP_CALIB: b2: Extracting arc EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 11 pixels MDRP_CALIB: b2: Searching for initial wavelength solution MDRP_FITARCIMAGE: b2: Setting ncoeff= 5 MDRP_FITARCIMAGE: b2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: b2: Combining rows 355 to 359 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68643 0.19996 -0.02391 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68643 0.19996 -0.02403 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.741316 MDRP_FITARCIMAGE: b2: Best correlation = 0.741316 MDRP_FITARCIMAGE: b2: ASET = 3.68643 0.19996 -0.02403 0.00128 MDRP_CALIB: b2: Searching for wavelength solution MDRP_FITARCIMAGE: b2: Setting ncoeff= 6 MDRP_FITARCIMAGE: b2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68894 0.19786 -0.02383 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68894 0.19786 -0.02395 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.794159 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68856 0.19800 -0.02384 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68856 0.19800 -0.02390 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.795974 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68818 0.19853 -0.02386 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68818 0.19853 -0.02398 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.799038 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68779 0.19867 -0.02387 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68779 0.19867 -0.02399 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.798594 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68760 0.19914 -0.02387 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68750 0.19918 -0.02400 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.800805 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68740 0.19921 -0.02388 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68731 0.19925 -0.02400 0.00124 ARCFIT_GUESS: b2: Initial correlation = 0.806341 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68721 0.19928 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68721 0.19928 -0.02401 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.805129 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68701 0.19935 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68701 0.19935 -0.02401 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.796008 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68682 0.19982 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68682 0.19956 -0.02402 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.803820 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68663 0.19989 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68663 0.19963 -0.02402 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.801428 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68663 0.19989 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68653 0.19993 -0.02403 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.800477 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68643 0.19996 -0.02391 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68643 0.19996 -0.02403 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.798154 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68643 0.19996 -0.02391 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68643 0.19970 -0.02403 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.798950 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68643 0.19996 -0.02391 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68643 0.19970 -0.02397 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.798435 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68643 0.19956 -0.02391 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68633 0.19986 -0.02403 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.801506 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68643 0.19956 -0.02391 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68633 0.19960 -0.02403 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.798289 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68643 0.19956 -0.02391 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68643 0.19956 -0.02403 0.00126 ARCFIT_GUESS: b2: Initial correlation = 0.800598 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68662 0.19909 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68662 0.19936 -0.02396 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.800462 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68681 0.19902 -0.02384 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68672 0.19906 -0.02396 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.804360 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68700 0.19856 -0.02371 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68691 0.19886 -0.02384 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.798909 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68700 0.19855 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68700 0.19855 -0.02401 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.805230 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68739 0.19802 -0.02364 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68729 0.19806 -0.02376 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.798068 XY2TRACESET: b2: Total rejected = 0 MDRP_FITARCIMAGE: b2: Iterating flux-weighted centers MDRP_FITARCIMAGE: b2: Discarding line 2, at 3654.8390 Ang: RMS= 0.76104077 pix MDRP_FITARCIMAGE: b2: Number of arc lines: 44 MDRP_FITARCIMAGE: b2: Iteration 0 XY2TRACESET: b2: Total rejected = 5020 MDRP_FITARCIMAGE: b2: Rejecting line at 5341.0938 Ang MDRP_FITARCIMAGE: b2: Iteration 1 XY2TRACESET: b2: Total rejected = 4989 MDRP_FITARCIMAGE: b2: Rejecting line at 4306.6720 Ang MDRP_FITARCIMAGE: b2: Iteration 2 XY2TRACESET: b2: Total rejected = 4942 MDRP_FITARCIMAGE: b2: Rejecting line at 3650.1570 Ang MDRP_FITARCIMAGE: b2: Iteration 3 XY2TRACESET: b2: Total rejected = 4963 MDRP_FITARCIMAGE: b2: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: b2: Iteration 4 XY2TRACESET: b2: Total rejected = 4998 MDRP_FITARCIMAGE: b2: Rejecting line at 3983.8390 Ang MDRP_FITARCIMAGE: b2: Iteration 5 XY2TRACESET: b2: Total rejected = 5068 MDRP_FITARCIMAGE: b2: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: b2: Iteration 6 XY2TRACESET: b2: Total rejected = 5087 MDRP_FITARCIMAGE: b2: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: b2: Iteration 7 XY2TRACESET: b2: Total rejected = 5120 MDRP_FITARCIMAGE: b2: Rejecting line at 4412.9890 Ang MDRP_FITARCIMAGE: b2: Iteration 8 XY2TRACESET: b2: Total rejected = 5170 MDRP_FITARCIMAGE: b2: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: b2: Iteration 9 XY2TRACESET: b2: Total rejected = 5178 MDRP_FITARCIMAGE: b2: Iterations done XY2TRACESET: b2: Total rejected = 5178 XY2TRACESET: b2: Total rejected = 0 XY2TRACESET: b2: Total rejected = 0 XY2TRACESET: b2: Total rejected = 0 MDRP_FITARCIMAGE: b2: Line 0 3610.5080 5.20472e-07 MDRP_FITARCIMAGE: b2: Line 1 3650.1570 0.00000 Reject-offset MDRP_FITARCIMAGE: b2: Line 2 3654.8390 0.00000 Reject-offset MDRP_FITARCIMAGE: b2: Line 3 3983.8390 1.10940e-05 Reject MDRP_FITARCIMAGE: b2: Line 4 4046.5720 2.42618e-06 MDRP_FITARCIMAGE: b2: Line 5 4077.8380 2.68865e-06 MDRP_FITARCIMAGE: b2: Line 6 4306.6720 1.11315e-05 Reject MDRP_FITARCIMAGE: b2: Line 7 4339.2200 8.72969e-06 MDRP_FITARCIMAGE: b2: Line 8 4347.5060 2.56558e-06 MDRP_FITARCIMAGE: b2: Line 9 4358.3370 3.55661e-06 MDRP_FITARCIMAGE: b2: Line 10 4412.9890 1.06825e-05 Reject MDRP_FITARCIMAGE: b2: Line 11 4662.3520 6.00210e-06 MDRP_FITARCIMAGE: b2: Line 12 4678.1490 5.83118e-06 MDRP_FITARCIMAGE: b2: Line 13 4799.9120 1.85358e-06 MDRP_FITARCIMAGE: b2: Line 14 4916.0700 3.41232e-06 MDRP_FITARCIMAGE: b2: Line 15 5085.8220 1.94792e-06 MDRP_FITARCIMAGE: b2: Line 16 5330.7775 7.85069e-06 MDRP_FITARCIMAGE: b2: Line 17 5341.0938 1.76627e-05 Reject MDRP_FITARCIMAGE: b2: Line 18 5400.5616 4.84439e-06 MDRP_FITARCIMAGE: b2: Line 19 5460.7530 2.17699e-06 MDRP_FITARCIMAGE: b2: Line 20 5656.6588 1.02119e-05 Reject MDRP_FITARCIMAGE: b2: Line 21 5675.8600 1.09583e-05 Reject MDRP_FITARCIMAGE: b2: Line 22 5689.8163 1.07987e-05 MDRP_FITARCIMAGE: b2: Line 23 5719.5300 1.08714e-05 Reject MDRP_FITARCIMAGE: b2: Line 24 5769.5980 1.56404e-06 MDRP_FITARCIMAGE: b2: Line 25 5790.6630 1.49621e-06 MDRP_FITARCIMAGE: b2: Line 26 5820.1558 4.84057e-06 MDRP_FITARCIMAGE: b2: Line 27 5852.4880 1.36370e-06 MDRP_FITARCIMAGE: b2: Line 28 5881.8950 1.34216e-06 MDRP_FITARCIMAGE: b2: Line 29 5944.8340 1.10096e-06 MDRP_FITARCIMAGE: b2: Line 30 5965.4710 8.86997e-06 Reject MDRP_FITARCIMAGE: b2: Line 31 6029.9970 1.46714e-06 MDRP_FITARCIMAGE: b2: Line 32 6074.3380 1.16391e-06 MDRP_FITARCIMAGE: b2: Line 33 6096.1630 1.03924e-06 MDRP_FITARCIMAGE: b2: Line 34 6143.0630 8.22785e-07 MDRP_FITARCIMAGE: b2: Line 35 6163.5940 9.39478e-07 MDRP_FITARCIMAGE: b2: Line 36 6217.2810 2.05294e-06 MDRP_FITARCIMAGE: b2: Line 37 6266.4950 2.55516e-06 MDRP_FITARCIMAGE: b2: Line 38 6304.7890 3.92432e-06 MDRP_FITARCIMAGE: b2: Line 39 6334.4280 3.88296e-06 MDRP_FITARCIMAGE: b2: Line 40 6382.9920 1.86648e-06 MDRP_FITARCIMAGE: b2: Line 41 6402.2460 2.03535e-06 MDRP_FITARCIMAGE: b2: Line 42 6438.4700 3.31272e-06 MDRP_FITARCIMAGE: b2: Line 43 6506.5280 3.09798e-06 MDRP_FITARCIMAGE: b2: Line 44 6532.8820 5.18952e-06 XY2TRACESET: b2: Total rejected = 0 MDRP_FITARCIMAGE: b2: Time 106. seconds elapsed MDRP_CALIB: b2: Number of Rejected lamp lines: 2 out of 45 lamp lines EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 10436 pixels XY2TRACESET: b2: Total rejected = 2013 MDRP_FITDISPERSION: b2: Median wavelength widths = 1.03 1.01 1.08 1.06 pix (L B T R) MDRP_CALIB: b2: GOOD ARC!, sdR-b2-00200804.fit MDRP_CALIB: b2: Extracting arc # 2 of 2 MDRP_CALIB: b2: Reading arc sdR-b2-00200807.fit SDSSPROC: b2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b2: Selecting op file boss_pixbias-56859-b2.fits.gz BOLTON_BIASSUB: b2: Doing row-by-row bias for b2 crazy quadrant. SDSSPROC: b2: Read noise = 1.96165 2.06364 2.03248 1.81840 electrons FINDOPFILE: b2: Selecting op file pixflatave-55056-b2.fits.gz SDSSPROC: b2: Correcting with pixel flat pixflatave-55056-b2.fits.gz FINDOPFILE: b2: Selecting op file badpixels-56149-b2.fits.gz SDSSPROC: b2: Correcting with badpixels badpixels-56149-b2.fits.gz MDRP_CALIB: b2: Fraction of bad pixels in arc = 4.13828e-05 MDRP_CALIB: b2: Arc sdR-b2-00200807.fit paired with flat sdR-b2-00200808.fit MDRP_MATCH_TRACE: b2: Iteration: 0 Pixels Rejected: 23516 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 1 Pixels Rejected: 354 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 2 Pixels Rejected: 100 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 3 Pixels Rejected: 28 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 4 Pixels Rejected: 6 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 5 Pixels Rejected: 2 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 6 Pixels Rejected: 2 Finished? 0 MDRP_MATCH_TRACE: b2: Iteration: 7 Pixels Rejected: 0 Finished? 1 MDRP_MATCH_TRACE: b2: Warning: Large number of pixels rejected! 24008 MDRP_CALIB: b2: Shifting traces with match_trace -0.0339355 MDRP_CALIB: b2: Extracting arc EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 4 pixels MDRP_CALIB: b2: Searching for initial wavelength solution MDRP_FITARCIMAGE: b2: Setting ncoeff= 5 MDRP_FITARCIMAGE: b2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: b2: Combining rows 355 to 359 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68663 0.19989 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68663 0.19989 -0.02402 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.741845 MDRP_FITARCIMAGE: b2: Best correlation = 0.741845 MDRP_FITARCIMAGE: b2: ASET = 3.68663 0.19989 -0.02402 0.00128 MDRP_CALIB: b2: Searching for wavelength solution MDRP_FITARCIMAGE: b2: Setting ncoeff= 6 MDRP_FITARCIMAGE: b2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68914 0.19779 -0.02383 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68914 0.19752 -0.02395 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.794026 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68875 0.19793 -0.02384 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68875 0.19793 -0.02384 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.796859 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68837 0.19847 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68837 0.19847 -0.02397 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.798977 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68798 0.19860 -0.02386 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68798 0.19860 -0.02398 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.800596 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68779 0.19907 -0.02387 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68770 0.19884 -0.02399 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.799873 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68760 0.19915 -0.02381 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68750 0.19918 -0.02394 0.00126 ARCFIT_GUESS: b2: Initial correlation = 0.801895 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68740 0.19921 -0.02388 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68731 0.19925 -0.02400 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.803529 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68721 0.19928 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68711 0.19958 -0.02401 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.797264 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68702 0.19975 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68702 0.19949 -0.02401 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.800495 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68682 0.19982 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68682 0.19956 -0.02402 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.800857 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68682 0.19982 -0.02384 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68672 0.19959 -0.02396 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.798189 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68663 0.19989 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68663 0.19963 -0.02402 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.796828 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68663 0.19989 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -154 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68663 0.19963 -0.02396 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.796067 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68662 0.19949 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68652 0.19979 -0.02403 0.00124 ARCFIT_GUESS: b2: Initial correlation = 0.798944 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68662 0.19949 -0.02384 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68652 0.19953 -0.02397 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.798363 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68662 0.19949 -0.02384 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68652 0.19953 -0.02397 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.797027 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68662 0.19949 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68662 0.19949 -0.02402 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.800544 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68681 0.19902 -0.02390 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 154 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68672 0.19932 -0.02402 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.799804 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68701 0.19896 -0.02377 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68691 0.19899 -0.02390 0.00122 ARCFIT_GUESS: b2: Initial correlation = 0.802094 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68701 0.19895 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68701 0.19869 -0.02401 0.00120 ARCFIT_GUESS: b2: Initial correlation = 0.802032 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68720 0.19848 -0.02389 0.00124 ARCFIT_ITER: b2: Searching lags from -155 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68720 0.19848 -0.02401 0.00122 ARCFIT_GUESS: b2: Initial correlation = 0.804428 XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68467 0.19959 -0.02385 0.00124 ARCFIT_ITER: b2: Searching lags from -772 to 772 spaced 2 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Searching about coefficients = 3.68739 0.19801 -0.02388 0.00124 ARCFIT_ITER: b2: Searching lags from -156 to 155 spaced 1 pixels XY2TRACESET: b2: Total rejected = 0 ARCFIT_GUESS: b2: Initial wavelength fit = 3.68739 0.19828 -0.02400 0.00128 ARCFIT_GUESS: b2: Initial correlation = 0.802786 XY2TRACESET: b2: Total rejected = 0 MDRP_FITARCIMAGE: b2: Iterating flux-weighted centers MDRP_FITARCIMAGE: b2: Discarding line 2, at 3654.8390 Ang: RMS= 0.72447463 pix MDRP_FITARCIMAGE: b2: Number of arc lines: 44 MDRP_FITARCIMAGE: b2: Iteration 0 XY2TRACESET: b2: Total rejected = 4868 MDRP_FITARCIMAGE: b2: Rejecting line at 5341.0938 Ang MDRP_FITARCIMAGE: b2: Iteration 1 XY2TRACESET: b2: Total rejected = 4828 MDRP_FITARCIMAGE: b2: Rejecting line at 4306.6720 Ang MDRP_FITARCIMAGE: b2: Iteration 2 XY2TRACESET: b2: Total rejected = 4753 MDRP_FITARCIMAGE: b2: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: b2: Iteration 3 XY2TRACESET: b2: Total rejected = 4807 MDRP_FITARCIMAGE: b2: Rejecting line at 3650.1570 Ang MDRP_FITARCIMAGE: b2: Iteration 4 XY2TRACESET: b2: Total rejected = 5057 MDRP_FITARCIMAGE: b2: Rejecting line at 3983.8390 Ang MDRP_FITARCIMAGE: b2: Iteration 5 XY2TRACESET: b2: Total rejected = 5118 MDRP_FITARCIMAGE: b2: Rejecting line at 4412.9890 Ang MDRP_FITARCIMAGE: b2: Iteration 6 XY2TRACESET: b2: Total rejected = 5152 MDRP_FITARCIMAGE: b2: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: b2: Iteration 7 XY2TRACESET: b2: Total rejected = 5187 MDRP_FITARCIMAGE: b2: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: b2: Iteration 8 XY2TRACESET: b2: Total rejected = 5204 MDRP_FITARCIMAGE: b2: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: b2: Iteration 9 XY2TRACESET: b2: Total rejected = 5225 MDRP_FITARCIMAGE: b2: Iterations done XY2TRACESET: b2: Total rejected = 5225 XY2TRACESET: b2: Total rejected = 0 XY2TRACESET: b2: Total rejected = 0 XY2TRACESET: b2: Total rejected = 0 MDRP_FITARCIMAGE: b2: Line 0 3610.5080 5.08529e-07 MDRP_FITARCIMAGE: b2: Line 1 3650.1570 1.89961e-05 Reject MDRP_FITARCIMAGE: b2: Line 2 3654.8390 0.00000 Reject-offset MDRP_FITARCIMAGE: b2: Line 3 3983.8390 1.15543e-05 Reject MDRP_FITARCIMAGE: b2: Line 4 4046.5720 2.41371e-06 MDRP_FITARCIMAGE: b2: Line 5 4077.8380 2.73724e-06 MDRP_FITARCIMAGE: b2: Line 6 4306.6720 1.08979e-05 Reject MDRP_FITARCIMAGE: b2: Line 7 4339.2200 8.41094e-06 MDRP_FITARCIMAGE: b2: Line 8 4347.5060 2.72939e-06 MDRP_FITARCIMAGE: b2: Line 9 4358.3370 3.58337e-06 MDRP_FITARCIMAGE: b2: Line 10 4412.9890 1.02060e-05 Reject MDRP_FITARCIMAGE: b2: Line 11 4662.3520 6.46926e-06 MDRP_FITARCIMAGE: b2: Line 12 4678.1490 5.14319e-06 MDRP_FITARCIMAGE: b2: Line 13 4799.9120 1.82620e-06 MDRP_FITARCIMAGE: b2: Line 14 4916.0700 3.47380e-06 MDRP_FITARCIMAGE: b2: Line 15 5085.8220 2.06843e-06 MDRP_FITARCIMAGE: b2: Line 16 5330.7775 7.46596e-06 MDRP_FITARCIMAGE: b2: Line 17 5341.0938 1.59153e-05 Reject-offset MDRP_FITARCIMAGE: b2: Line 18 5400.5616 4.62060e-06 MDRP_FITARCIMAGE: b2: Line 19 5460.7530 2.22657e-06 MDRP_FITARCIMAGE: b2: Line 20 5656.6588 9.66245e-06 Reject MDRP_FITARCIMAGE: b2: Line 21 5675.8600 1.10900e-05 Reject MDRP_FITARCIMAGE: b2: Line 22 5689.8163 1.03985e-05 MDRP_FITARCIMAGE: b2: Line 23 5719.5300 1.04449e-05 Reject MDRP_FITARCIMAGE: b2: Line 24 5769.5980 1.55893e-06 MDRP_FITARCIMAGE: b2: Line 25 5790.6630 1.52573e-06 MDRP_FITARCIMAGE: b2: Line 26 5820.1558 4.85072e-06 MDRP_FITARCIMAGE: b2: Line 27 5852.4880 1.31954e-06 MDRP_FITARCIMAGE: b2: Line 28 5881.8950 1.27152e-06 MDRP_FITARCIMAGE: b2: Line 29 5944.8340 1.02601e-06 MDRP_FITARCIMAGE: b2: Line 30 5965.4710 1.13366e-05 Reject MDRP_FITARCIMAGE: b2: Line 31 6029.9970 1.55527e-06 MDRP_FITARCIMAGE: b2: Line 32 6074.3380 1.41636e-06 MDRP_FITARCIMAGE: b2: Line 33 6096.1630 1.14549e-06 MDRP_FITARCIMAGE: b2: Line 34 6143.0630 8.52252e-07 MDRP_FITARCIMAGE: b2: Line 35 6163.5940 9.71663e-07 MDRP_FITARCIMAGE: b2: Line 36 6217.2810 1.70288e-06 MDRP_FITARCIMAGE: b2: Line 37 6266.4950 2.64905e-06 MDRP_FITARCIMAGE: b2: Line 38 6304.7890 4.42448e-06 MDRP_FITARCIMAGE: b2: Line 39 6334.4280 4.67265e-06 MDRP_FITARCIMAGE: b2: Line 40 6382.9920 1.71457e-06 MDRP_FITARCIMAGE: b2: Line 41 6402.2460 2.14866e-06 MDRP_FITARCIMAGE: b2: Line 42 6438.4700 3.42237e-06 MDRP_FITARCIMAGE: b2: Line 43 6506.5280 3.29296e-06 MDRP_FITARCIMAGE: b2: Line 44 6532.8820 4.63231e-06 XY2TRACESET: b2: Total rejected = 0 MDRP_FITARCIMAGE: b2: Time 109. seconds elapsed MDRP_CALIB: b2: Number of Rejected lamp lines: 2 out of 45 lamp lines EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 10411 pixels XY2TRACESET: b2: Total rejected = 1523 MDRP_FITDISPERSION: b2: Median wavelength widths = 1.01 1.00 1.07 1.06 pix (L B T R) MDRP_CALIB: b2: GOOD ARC!, sdR-b2-00200807.fit MDRP_CALIB: b2: CREATING FIBERFLATS---------------------- MDRP_CALIB: b2: Create fiberflats for flat # 1 of 2 MDRP_CALIB: b2: Flat sdR-b2-00200803.fit paired with arc sdR-b2-00200804.fit MDRP_CALIB: b2: Reading flat sdR-b2-00200803.fit SDSSPROC: b2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b2: Selecting op file boss_pixbias-56859-b2.fits.gz BOLTON_BIASSUB: b2: Doing row-by-row bias for b2 crazy quadrant. SDSSPROC: b2: Read noise = 2.10487 2.13090 2.04930 1.83956 electrons FINDOPFILE: b2: Selecting op file pixflatave-55056-b2.fits.gz SDSSPROC: b2: Correcting with pixel flat pixflatave-55056-b2.fits.gz FINDOPFILE: b2: Selecting op file badpixels-56149-b2.fits.gz SDSSPROC: b2: Correcting with badpixels badpixels-56149-b2.fits.gz EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 0 pixels MDRP_SUPERFLAT: b2: Wavelength range = 3553.5569 6656.2826 MDRP_SUPERFLAT: b2: Creating superflat from 704 fibers MDRP_FIBERFLAT: b2: Number of fiberflat points LE 0 = 1102336 ML_QAIFUFLAT: b2: Normalizing to 4th highest value of 1.09212 ML_MATCHMJD: b2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart02/56895 MDRP_CALIB: b2: Create fiberflats for flat # 2 of 2 MDRP_CALIB: b2: Flat sdR-b2-00200808.fit paired with arc sdR-b2-00200807.fit MDRP_CALIB: b2: Reading flat sdR-b2-00200808.fit SDSSPROC: b2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: b2: Selecting op file boss_pixbias-56859-b2.fits.gz BOLTON_BIASSUB: b2: Doing row-by-row bias for b2 crazy quadrant. SDSSPROC: b2: Read noise = 2.01556 2.13493 2.04313 1.83206 electrons FINDOPFILE: b2: Selecting op file pixflatave-55056-b2.fits.gz SDSSPROC: b2: Correcting with pixel flat pixflatave-55056-b2.fits.gz FINDOPFILE: b2: Selecting op file badpixels-56149-b2.fits.gz SDSSPROC: b2: Correcting with badpixels badpixels-56149-b2.fits.gz EXTRACT_IMAGE: b2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: b2: masked 1 pixels MDRP_SUPERFLAT: b2: Wavelength range = 3555.4295 6658.3022 MDRP_SUPERFLAT: b2: Creating superflat from 703 fibers MDRP_FIBERFLAT: b2: Number of fiberflat points LE 0 = 1102496 ML_QAIFUFLAT: b2: Normalizing to 4th highest value of 1.09193 ML_MATCHMJD: b2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart02/56895 MDRP_CALIB: b2: Writing calibration structure /uufs/chpc.utah.edu/common/home/sdss03/mangawork/manga/spectro/redux/v1_5_4/8330/57179/calibstruct-b2.sav MDRP_CALIB: b2: Elapsed time = 1560. seconds MDRP_REDUCE: b2: FINISHED CALIBRATION--------------- MDRP_REDUCE: b2: CALIB KEYWORD SET. SKIPPING SCIENCE AND ONLY REDUCING CALIBRATION FILES! MDRP_REDUCE: Elapsed time = 1561. seconds MDRP_REDUCE2D: Error. No science extractions were done. Problem with calibration files for camera b2 MDRP_REDUCE2D: Continuing with next camera ML_READSLITMAP: r2: Reading slitmap from /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/slitmaps/0083XX/8330/slitmap-8330-57179-02.par MDRP_REDUCE: r2: STARTING CALIBRATION--------------- MDRP_CALIB: r2: LOOP THROUGH FLATS----------------------------- MDRP_CALIB: r2: Tracing flat # 1 of 2 MDRP_CALIB: r2: Reading flat sdR-r2-00200803.fit SDSSPROC: r2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r2: Selecting op file boss_pixbias-56859-r2.fits.gz SDSSPROC: r2: Read noise = 2.63805 2.80880 2.72985 2.72188 electrons FINDOPFILE: r2: Selecting op file pixflatave-56859-r2.fits.gz SDSSPROC: r2: Correcting with pixel flat pixflatave-56859-r2.fits.gz FINDOPFILE: r2: Selecting op file badpixels-56859-r2.fits.gz SDSSPROC: r2: Correcting with badpixels badpixels-56859-r2.fits.gz MDRP_CALIB: r2: Tracing fibers in sdR-r2-00200803.fit ML_MATCHMJD: r2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-02-56690.par MDRP_CCTRACEFIBERS: r2: Total Fibers: 714 MDRP_CCPEAKS: r2: Traces scaled by 1.00350 MDRP_CCPEAKS: r2: Traces shifted by -4.70000 ccd units MDRP_CCPEAKS: r2: Trace correlation = 0.96938835 MDRP_CCPEAKS: r2: THIS PASS: MDRP_CCPEAKS: r2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCPEAKS: r2: Number of peaks Found: 707 MDRP_CCPEAKS: r2: Number of Missing Fibers: 7 MDRP_CCPEAKS: r2: Number of missing edge fibers: 4 MDRP_CCPEAKS: r2: Number of missing interior fibers: 3 MDRP_CCTRACEFIBERS: r2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCTRACEFIBERS: r2: TOTAL MISSING FIBERS: 7 MDRP_CCTRACEFIBERS: r2: MISSING FIBERS (1-indexed): 35 36 387 417 491 585 714 MDRP_CCTRACEFIBERS: r2: MISSING PEAKS 449 453 2175 2320 2687 3146 3779 MDRP_CCTRACEFIBERS: r2: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: r2: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: r2: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: r2: Warning: Fixing traces: 34 35 386 416 490 584 713 MDRP_CCTRACEFIBERS: r2: Fiber 34 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 35 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 386 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 416 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 490 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 584 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 713 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: r2: Fitting traces in sdR-r2-00200803.fit XY2TRACESET: r2: Total rejected = 71395 MDRP_CALIB: r2: Extracting flat with proftype= 1 EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 195 pixels MDRP_FITFLATWIDTH: r2: Median spatial widths = 0.99 0.99 1.01 1.06 pix (LL UL LR UR) ML_CCTWEAK: r2: Cross-correlating peaks up/down detector XY2TRACESET: r2: Total rejected = 38580 EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 169 pixels MDRP_FITFLATWIDTH: r2: Median spatial widths = 0.99 0.98 1.01 1.06 pix (LL UL LR UR) MDRP_CALIB: r2: Using proftype= 1 MDRP_CALIB: r2: Found 0 bright pixels in extracted flat sdR-r2-00200803.fit MDRP_CALIB: r2: GOOD FLAT!, sdR-r2-00200803.fit MDRP_CALIB: r2: Tracing flat # 2 of 2 MDRP_CALIB: r2: Reading flat sdR-r2-00200808.fit SDSSPROC: r2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r2: Selecting op file boss_pixbias-56859-r2.fits.gz SDSSPROC: r2: Read noise = 2.75075 2.83138 2.83677 2.72245 electrons FINDOPFILE: r2: Selecting op file pixflatave-56859-r2.fits.gz SDSSPROC: r2: Correcting with pixel flat pixflatave-56859-r2.fits.gz FINDOPFILE: r2: Selecting op file badpixels-56859-r2.fits.gz SDSSPROC: r2: Correcting with badpixels badpixels-56859-r2.fits.gz MDRP_CALIB: r2: Tracing fibers in sdR-r2-00200808.fit ML_MATCHMJD: r2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/opfiles/opFibers-02-56690.par MDRP_CCTRACEFIBERS: r2: Total Fibers: 714 MDRP_CCPEAKS: r2: Traces scaled by 1.00350 MDRP_CCPEAKS: r2: Traces shifted by -6.40000 ccd units MDRP_CCPEAKS: r2: Trace correlation = 0.95008425 MDRP_CCPEAKS: r2: THIS PASS: MDRP_CCPEAKS: r2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCPEAKS: r2: Number of peaks Found: 704 MDRP_CCPEAKS: r2: Number of Missing Fibers: 10 MDRP_CCPEAKS: r2: Number of missing edge fibers: 5 MDRP_CCPEAKS: r2: Number of missing interior fibers: 5 MDRP_CCTRACEFIBERS: r2: EXPECTED TOTAL NUMBER OF FIBERS: 714 MDRP_CCTRACEFIBERS: r2: TOTAL MISSING FIBERS: 10 MDRP_CCTRACEFIBERS: r2: MISSING FIBERS (1-indexed): 35 36 37 38 39 387 417 491 585 714 MDRP_CCTRACEFIBERS: r2: MISSING PEAKS 447 451 456 460 465 2173 2318 2685 3144 3777 MDRP_CCTRACEFIBERS: r2: TRACING FIBERS ALONG THE REST OF THE CCD MDRP_CCTRACEFIBERS: r2: Comparing traces to ystart. Fit polynomial and assume traces are mapped to that. MDRP_CCTRACEFIBERS: r2: Deviant centers from this rejected and replaced with predicted position from fit. MDRP_CCTRACEFIBERS: r2: Warning: Fixing traces: 34 35 36 37 38 386 416 490 584 713 MDRP_CCTRACEFIBERS: r2: Fiber 34 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 35 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 36 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 37 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 38 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 386 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 416 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 490 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 584 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Fiber 713 Only 1 neighboring good fibers, skipping MDRP_CCTRACEFIBERS: r2: Flagging fibermask bits for any fiber with more than 45% of positions masked out. Ignore xgood MDRP_CALIB: r2: Fitting traces in sdR-r2-00200808.fit XY2TRACESET: r2: Total rejected = 72957 MDRP_CALIB: r2: Extracting flat with proftype= 1 EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 234 pixels MDRP_FITFLATWIDTH: r2: Median spatial widths = 0.98 0.98 1.01 1.06 pix (LL UL LR UR) ML_CCTWEAK: r2: Cross-correlating peaks up/down detector XY2TRACESET: r2: Total rejected = 37638 EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 16 pixels MDRP_FITFLATWIDTH: r2: Median spatial widths = 0.98 0.98 1.01 1.06 pix (LL UL LR UR) MDRP_CALIB: r2: Using proftype= 1 MDRP_CALIB: r2: Found 0 bright pixels in extracted flat sdR-r2-00200808.fit MDRP_CALIB: r2: GOOD FLAT!, sdR-r2-00200808.fit MDRP_CALIB: r2: LOOP THROUGH ARCS------------------------- MDRP_CALIB: r2: Extracting arc # 1 of 2 MDRP_CALIB: r2: Reading arc sdR-r2-00200804.fit SDSSPROC: r2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r2: Selecting op file boss_pixbias-56859-r2.fits.gz SDSSPROC: r2: Read noise = 2.64449 2.80854 2.73491 2.73573 electrons FINDOPFILE: r2: Selecting op file pixflatave-56859-r2.fits.gz SDSSPROC: r2: Correcting with pixel flat pixflatave-56859-r2.fits.gz FINDOPFILE: r2: Selecting op file badpixels-56859-r2.fits.gz SDSSPROC: r2: Correcting with badpixels badpixels-56859-r2.fits.gz MDRP_CALIB: r2: Fraction of bad pixels in arc = 0.000746352 MDRP_CALIB: r2: Arc sdR-r2-00200804.fit paired with flat sdR-r2-00200803.fit MDRP_MATCH_TRACE: r2: Iteration: 0 Pixels Rejected: 41263 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 1 Pixels Rejected: 1049 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 2 Pixels Rejected: 373 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 3 Pixels Rejected: 151 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 4 Pixels Rejected: 59 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 5 Pixels Rejected: 29 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 6 Pixels Rejected: 15 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 7 Pixels Rejected: 9 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 8 Pixels Rejected: 6 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 9 Pixels Rejected: 7 Finished? 0 MDRP_MATCH_TRACE: r2: Warning: Large number of pixels rejected! 42961 MDRP_CALIB: r2: Shifting traces with match_trace 0.0535889 MDRP_CALIB: r2: Extracting arc EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 147 pixels MDRP_CALIB: r2: Setting 2-phase readout flag MDRP_CALIB: r2: Searching for initial wavelength solution MDRP_FITARCIMAGE: r2: Setting ncoeff= 5 MDRP_FITARCIMAGE: r2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: r2: Combining rows 355 to 359 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89704 0.16380 -0.01860 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89704 0.16380 -0.01860 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.774165 MDRP_FITARCIMAGE: r2: Best correlation = 0.774165 MDRP_FITARCIMAGE: r2: ASET = 3.89704 0.16380 -0.01860 0.00114 -0.00002 -0.00002 MDRP_CALIB: r2: Searching for wavelength solution MDRP_FITARCIMAGE: r2: Setting ncoeff= 6 MDRP_FITARCIMAGE: r2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89873 0.16162 -0.01842 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -192 to 191 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89873 0.16162 -0.01830 0.00116 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.762030 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89843 0.16213 -0.01843 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -191 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89835 0.16215 -0.01831 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767143 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89813 0.16263 -0.01844 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89813 0.16263 -0.01832 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.770101 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89781 0.16274 -0.01845 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89781 0.16274 -0.01833 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766813 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89766 0.16319 -0.01846 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89766 0.16319 -0.01834 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766704 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89751 0.16325 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89751 0.16325 -0.01835 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.765861 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89735 0.16330 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89743 0.16354 -0.01835 0.00120 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766368 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01860 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89728 0.16372 -0.01847 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766396 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01848 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89720 0.16375 -0.01842 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766987 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89704 0.16380 -0.01860 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89704 0.16380 -0.01860 0.00118 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.765728 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89704 0.16380 -0.01854 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89704 0.16380 -0.01860 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.765747 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89704 0.16380 -0.01854 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89704 0.16380 -0.01854 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.765660 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89704 0.16379 -0.01866 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89712 0.16377 -0.01854 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.765534 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01848 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89720 0.16375 -0.01848 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766935 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89736 0.16370 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89728 0.16373 -0.01847 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.768393 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89735 0.16330 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89743 0.16354 -0.01841 0.00118 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.768839 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89750 0.16324 -0.01859 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89758 0.16321 -0.01846 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766787 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89782 0.16314 -0.01845 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89790 0.16311 -0.01833 0.00120 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766995 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89797 0.16268 -0.01851 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89813 0.16289 -0.01838 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766586 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89845 0.16253 -0.01843 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89837 0.16255 -0.01831 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.768840 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89859 0.16207 -0.01843 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -191 to 191 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89867 0.16204 -0.01830 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.768316 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89889 0.16156 -0.01841 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -192 to 191 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89897 0.16180 -0.01829 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766961 XY2TRACESET: r2: Total rejected = 0 MDRP_FITARCIMAGE: r2: Iterating flux-weighted centers MDRP_FITARCIMAGE: r2: Discarding line 61, at 9657.7860 Ang: RMS= 1.3584662 pix MDRP_FITARCIMAGE: r2: Discarding line 63, at 9784.5030 Ang: RMS= 0.36802311 pix MDRP_FITARCIMAGE: r2: Number of arc lines: 63 MDRP_FITARCIMAGE: r2: Iteration 0 XY2TRACESET: r2: Total rejected = 8597 MDRP_FITARCIMAGE: r2: Rejecting line at 5689.8163 Ang MDRP_FITARCIMAGE: r2: Iteration 1 XY2TRACESET: r2: Total rejected = 8475 MDRP_FITARCIMAGE: r2: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: r2: Iteration 2 XY2TRACESET: r2: Total rejected = 8359 MDRP_FITARCIMAGE: r2: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: r2: Iteration 3 XY2TRACESET: r2: Total rejected = 8297 MDRP_FITARCIMAGE: r2: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: r2: Iteration 4 XY2TRACESET: r2: Total rejected = 8169 MDRP_FITARCIMAGE: r2: Rejecting line at 5400.5616 Ang MDRP_FITARCIMAGE: r2: Iteration 5 XY2TRACESET: r2: Total rejected = 8031 MDRP_FITARCIMAGE: r2: Rejecting line at 5820.1558 Ang MDRP_FITARCIMAGE: r2: Iteration 6 XY2TRACESET: r2: Total rejected = 7985 MDRP_FITARCIMAGE: r2: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: r2: Iteration 7 XY2TRACESET: r2: Total rejected = 7933 MDRP_FITARCIMAGE: r2: Rejecting line at 7514.6518 Ang MDRP_FITARCIMAGE: r2: Iteration 8 XY2TRACESET: r2: Total rejected = 7941 MDRP_FITARCIMAGE: r2: Rejecting line at 7503.8691 Ang MDRP_FITARCIMAGE: r2: Iteration 9 XY2TRACESET: r2: Total rejected = 7957 MDRP_FITARCIMAGE: r2: Rejecting line at 8521.4422 Ang MDRP_FITARCIMAGE: r2: Iteration 10 XY2TRACESET: r2: Total rejected = 7959 MDRP_FITARCIMAGE: r2: Rejecting line at 8014.7860 Ang MDRP_FITARCIMAGE: r2: Iteration 11 XY2TRACESET: r2: Total rejected = 7980 MDRP_FITARCIMAGE: r2: Iterations done XY2TRACESET: r2: Total rejected = 7912 XY2TRACESET: r2: Total rejected = 0 XY2TRACESET: r2: Total rejected = 0 XY2TRACESET: r2: Total rejected = 0 MDRP_FITARCIMAGE: r2: Line 0 5400.5616 1.11344e-05 Reject MDRP_FITARCIMAGE: r2: Line 1 5460.7530 5.79894e-06 MDRP_FITARCIMAGE: r2: Line 2 5656.6588 1.15236e-05 Reject MDRP_FITARCIMAGE: r2: Line 3 5675.8600 1.08480e-05 Reject MDRP_FITARCIMAGE: r2: Line 4 5689.8163 1.10987e-05 Reject MDRP_FITARCIMAGE: r2: Line 5 5719.5300 1.19005e-05 Reject MDRP_FITARCIMAGE: r2: Line 6 5769.5980 2.50007e-06 MDRP_FITARCIMAGE: r2: Line 7 5790.6630 2.14272e-06 MDRP_FITARCIMAGE: r2: Line 8 5820.1558 1.06673e-05 Reject MDRP_FITARCIMAGE: r2: Line 9 5852.4880 3.95247e-06 MDRP_FITARCIMAGE: r2: Line 10 5881.8950 3.76144e-06 MDRP_FITARCIMAGE: r2: Line 11 5944.8340 3.21404e-06 MDRP_FITARCIMAGE: r2: Line 12 5965.4710 1.12700e-05 Reject MDRP_FITARCIMAGE: r2: Line 13 6029.9970 1.35186e-06 MDRP_FITARCIMAGE: r2: Line 14 6074.3380 9.02816e-07 MDRP_FITARCIMAGE: r2: Line 15 6096.1630 7.93489e-07 MDRP_FITARCIMAGE: r2: Line 16 6143.0630 7.30573e-07 MDRP_FITARCIMAGE: r2: Line 17 6163.5940 8.74552e-07 MDRP_FITARCIMAGE: r2: Line 18 6217.2810 9.19014e-07 MDRP_FITARCIMAGE: r2: Line 19 6266.4950 6.71726e-07 MDRP_FITARCIMAGE: r2: Line 20 6304.7890 1.39068e-06 MDRP_FITARCIMAGE: r2: Line 21 6334.4280 1.87685e-06 MDRP_FITARCIMAGE: r2: Line 22 6382.9920 2.28517e-06 MDRP_FITARCIMAGE: r2: Line 23 6402.2460 2.28461e-06 MDRP_FITARCIMAGE: r2: Line 24 6438.4700 2.28819e-06 MDRP_FITARCIMAGE: r2: Line 25 6506.5280 2.99684e-06 MDRP_FITARCIMAGE: r2: Line 26 6532.8820 3.16200e-06 MDRP_FITARCIMAGE: r2: Line 27 6598.9530 3.17910e-06 MDRP_FITARCIMAGE: r2: Line 28 6717.0430 3.16204e-06 MDRP_FITARCIMAGE: r2: Line 29 6929.4670 2.48701e-06 MDRP_FITARCIMAGE: r2: Line 30 7032.4128 1.68760e-06 MDRP_FITARCIMAGE: r2: Line 31 7173.9380 1.27711e-06 MDRP_FITARCIMAGE: r2: Line 32 7245.1670 1.25411e-06 MDRP_FITARCIMAGE: r2: Line 33 7438.9000 4.30538e-06 MDRP_FITARCIMAGE: r2: Line 34 7488.8710 5.36406e-06 MDRP_FITARCIMAGE: r2: Line 35 7503.8691 1.13318e-05 Reject MDRP_FITARCIMAGE: r2: Line 36 7514.6518 1.11717e-05 Reject MDRP_FITARCIMAGE: r2: Line 37 7535.7740 6.72044e-06 MDRP_FITARCIMAGE: r2: Line 38 7635.1060 7.04464e-06 MDRP_FITARCIMAGE: r2: Line 39 8014.7860 1.05727e-05 Reject MDRP_FITARCIMAGE: r2: Line 40 8103.6930 9.91944e-06 MDRP_FITARCIMAGE: r2: Line 41 8300.3260 3.32002e-06 MDRP_FITARCIMAGE: r2: Line 42 8377.6065 7.49025e-06 MDRP_FITARCIMAGE: r2: Line 43 8408.2096 9.57708e-06 MDRP_FITARCIMAGE: r2: Line 44 8495.3598 3.57115e-06 MDRP_FITARCIMAGE: r2: Line 45 8521.4422 1.07214e-05 Reject MDRP_FITARCIMAGE: r2: Line 46 8591.2583 3.27781e-06 MDRP_FITARCIMAGE: r2: Line 47 8634.6470 1.71724e-06 MDRP_FITARCIMAGE: r2: Line 48 8654.3831 1.86324e-06 MDRP_FITARCIMAGE: r2: Line 49 8853.8670 1.60137e-06 MDRP_FITARCIMAGE: r2: Line 50 8919.5007 2.32344e-06 MDRP_FITARCIMAGE: r2: Line 51 9122.9674 9.45327e-06 MDRP_FITARCIMAGE: r2: Line 52 9201.7590 1.98722e-06 MDRP_FITARCIMAGE: r2: Line 53 9300.8530 2.21674e-06 MDRP_FITARCIMAGE: r2: Line 54 9313.1386 6.15870e-06 MDRP_FITARCIMAGE: r2: Line 55 9326.5070 2.35233e-06 MDRP_FITARCIMAGE: r2: Line 56 9425.3790 3.07087e-06 MDRP_FITARCIMAGE: r2: Line 57 9459.2100 5.41222e-06 MDRP_FITARCIMAGE: r2: Line 58 9486.6800 4.36328e-06 MDRP_FITARCIMAGE: r2: Line 59 9534.1630 2.72764e-06 MDRP_FITARCIMAGE: r2: Line 60 9547.4000 4.53097e-06 MDRP_FITARCIMAGE: r2: Line 61 9657.7860 1.10086e-05 Reject-RMS MDRP_FITARCIMAGE: r2: Line 62 9665.4240 2.31779e-06 MDRP_FITARCIMAGE: r2: Line 63 9784.5030 1.10706e-05 Reject-RMS MDRP_FITARCIMAGE: r2: Line 64 10139.750 1.28487e-06 XY2TRACESET: r2: Total rejected = 0 MDRP_FITARCIMAGE: r2: Time 129. seconds elapsed MDRP_CALIB: r2: Number of Rejected lamp lines: 1 out of 45 lamp lines EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 13022 pixels XY2TRACESET: r2: Total rejected = 3365 MDRP_FITDISPERSION: r2: Median wavelength widths = 1.00 1.02 1.04 1.02 pix (L B T R) MDRP_CALIB: r2: GOOD ARC!, sdR-r2-00200804.fit MDRP_CALIB: r2: Extracting arc # 2 of 2 MDRP_CALIB: r2: Reading arc sdR-r2-00200807.fit SDSSPROC: r2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r2: Selecting op file boss_pixbias-56859-r2.fits.gz SDSSPROC: r2: Read noise = 2.74859 2.83158 2.83617 2.73049 electrons FINDOPFILE: r2: Selecting op file pixflatave-56859-r2.fits.gz SDSSPROC: r2: Correcting with pixel flat pixflatave-56859-r2.fits.gz FINDOPFILE: r2: Selecting op file badpixels-56859-r2.fits.gz SDSSPROC: r2: Correcting with badpixels badpixels-56859-r2.fits.gz MDRP_CALIB: r2: Fraction of bad pixels in arc = 0.000814952 MDRP_CALIB: r2: Arc sdR-r2-00200807.fit paired with flat sdR-r2-00200808.fit MDRP_MATCH_TRACE: r2: Iteration: 0 Pixels Rejected: 45898 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 1 Pixels Rejected: 1188 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 2 Pixels Rejected: 442 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 3 Pixels Rejected: 179 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 4 Pixels Rejected: 76 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 5 Pixels Rejected: 28 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 6 Pixels Rejected: 10 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 7 Pixels Rejected: 5 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 8 Pixels Rejected: 2 Finished? 0 MDRP_MATCH_TRACE: r2: Iteration: 9 Pixels Rejected: 2 Finished? 0 MDRP_MATCH_TRACE: r2: Warning: Large number of pixels rejected! 47830 MDRP_CALIB: r2: Shifting traces with match_trace -0.0489502 MDRP_CALIB: r2: Extracting arc EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 110 pixels MDRP_CALIB: r2: Setting 2-phase readout flag MDRP_CALIB: r2: Searching for initial wavelength solution MDRP_FITARCIMAGE: r2: Setting ncoeff= 5 MDRP_FITARCIMAGE: r2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat MDRP_FITARCIMAGE: r2: Combining rows 355 to 359 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89704 0.16379 -0.01872 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89712 0.16376 -0.01860 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.773482 MDRP_FITARCIMAGE: r2: Best correlation = 0.773482 MDRP_FITARCIMAGE: r2: ASET = 3.89712 0.16376 -0.01860 0.00114 -0.00002 -0.00002 MDRP_CALIB: r2: Searching for wavelength solution MDRP_FITARCIMAGE: r2: Setting ncoeff= 6 MDRP_FITARCIMAGE: r2: Reading lamp file /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangadrp/v1_5_4/etc/lamphgcdne.dat XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89873 0.16162 -0.01842 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -192 to 191 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89881 0.16159 -0.01830 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.765094 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89843 0.16213 -0.01843 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -191 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89843 0.16213 -0.01831 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767561 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89812 0.16223 -0.01844 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -191 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89820 0.16247 -0.01832 0.00118 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.776196 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89781 0.16274 -0.01845 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89789 0.16271 -0.01833 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766851 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89766 0.16319 -0.01846 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89774 0.16317 -0.01834 0.00120 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766672 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89751 0.16325 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89751 0.16325 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767090 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89735 0.16330 -0.01853 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89743 0.16354 -0.01847 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.765831 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89736 0.16370 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89736 0.16370 -0.01835 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767297 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01854 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89720 0.16375 -0.01854 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767718 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01848 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89712 0.16378 -0.01854 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767451 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89704 0.16379 -0.01866 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89712 0.16377 -0.01854 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766229 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89704 0.16379 -0.01866 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89712 0.16377 -0.01854 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.765274 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01848 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89720 0.16375 -0.01848 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.765660 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89720 0.16375 -0.01860 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89728 0.16372 -0.01847 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767195 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89736 0.16370 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89736 0.16370 -0.01847 0.00120 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.769200 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89752 0.16365 -0.01847 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -189 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89744 0.16341 -0.01853 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.769004 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89766 0.16319 -0.01846 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89766 0.16319 -0.01846 0.00114 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767060 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89798 0.16309 -0.01845 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 189 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89790 0.16311 -0.01839 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.766982 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89813 0.16263 -0.01844 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89821 0.16287 -0.01832 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.768528 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89845 0.16253 -0.01843 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -190 to 190 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89845 0.16253 -0.01831 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.769671 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89875 0.16202 -0.01842 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -191 to 191 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89867 0.16204 -0.01830 0.00118 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767715 XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89270 0.16507 -0.01875 0.00119 -0.00001 -0.00002 ARCFIT_ITER: r2: Searching lags from -938 to 936 spaced 2 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Searching about coefficients = 3.89889 0.16156 -0.01841 0.00118 -0.00002 -0.00002 ARCFIT_ITER: r2: Searching lags from -192 to 191 spaced 1 pixels XY2TRACESET: r2: Total rejected = 0 ARCFIT_GUESS: r2: Initial wavelength fit = 3.89905 0.16178 -0.01829 0.00122 -0.00002 -0.00002 ARCFIT_GUESS: r2: Initial correlation = 0.767253 XY2TRACESET: r2: Total rejected = 0 MDRP_FITARCIMAGE: r2: Iterating flux-weighted centers MDRP_FITARCIMAGE: r2: Discarding line 61, at 9657.7860 Ang: RMS= 1.1941862 pix MDRP_FITARCIMAGE: r2: Discarding line 63, at 9784.5030 Ang: RMS= 0.41067109 pix MDRP_FITARCIMAGE: r2: Number of arc lines: 63 MDRP_FITARCIMAGE: r2: Iteration 0 XY2TRACESET: r2: Total rejected = 8240 MDRP_FITARCIMAGE: r2: Rejecting line at 5656.6588 Ang MDRP_FITARCIMAGE: r2: Iteration 1 XY2TRACESET: r2: Total rejected = 8201 MDRP_FITARCIMAGE: r2: Rejecting line at 5719.5300 Ang MDRP_FITARCIMAGE: r2: Iteration 2 XY2TRACESET: r2: Total rejected = 8097 MDRP_FITARCIMAGE: r2: Rejecting line at 5400.5616 Ang MDRP_FITARCIMAGE: r2: Iteration 3 XY2TRACESET: r2: Total rejected = 8012 MDRP_FITARCIMAGE: r2: Rejecting line at 5675.8600 Ang MDRP_FITARCIMAGE: r2: Iteration 4 XY2TRACESET: r2: Total rejected = 7890 MDRP_FITARCIMAGE: r2: Rejecting line at 5689.8163 Ang MDRP_FITARCIMAGE: r2: Iteration 5 XY2TRACESET: r2: Total rejected = 7751 MDRP_FITARCIMAGE: r2: Rejecting line at 5820.1558 Ang MDRP_FITARCIMAGE: r2: Iteration 6 XY2TRACESET: r2: Total rejected = 7712 MDRP_FITARCIMAGE: r2: Rejecting line at 5965.4710 Ang MDRP_FITARCIMAGE: r2: Iteration 7 XY2TRACESET: r2: Total rejected = 7651 MDRP_FITARCIMAGE: r2: Rejecting line at 7514.6518 Ang MDRP_FITARCIMAGE: r2: Iteration 8 XY2TRACESET: r2: Total rejected = 7665 MDRP_FITARCIMAGE: r2: Rejecting line at 7503.8691 Ang MDRP_FITARCIMAGE: r2: Iteration 9 XY2TRACESET: r2: Total rejected = 7702 MDRP_FITARCIMAGE: r2: Rejecting line at 8014.7860 Ang MDRP_FITARCIMAGE: r2: Iteration 10 XY2TRACESET: r2: Total rejected = 7692 MDRP_FITARCIMAGE: r2: Rejecting line at 8521.4422 Ang MDRP_FITARCIMAGE: r2: Iteration 11 XY2TRACESET: r2: Total rejected = 7702 MDRP_FITARCIMAGE: r2: Iterations done XY2TRACESET: r2: Total rejected = 7580 XY2TRACESET: r2: Total rejected = 0 XY2TRACESET: r2: Total rejected = 0 XY2TRACESET: r2: Total rejected = 0 MDRP_FITARCIMAGE: r2: Line 0 5400.5616 1.07815e-05 Reject MDRP_FITARCIMAGE: r2: Line 1 5460.7530 5.51267e-06 MDRP_FITARCIMAGE: r2: Line 2 5656.6588 1.16113e-05 Reject MDRP_FITARCIMAGE: r2: Line 3 5675.8600 1.15953e-05 Reject MDRP_FITARCIMAGE: r2: Line 4 5689.8163 1.13684e-05 Reject MDRP_FITARCIMAGE: r2: Line 5 5719.5300 1.14422e-05 Reject MDRP_FITARCIMAGE: r2: Line 6 5769.5980 2.44729e-06 MDRP_FITARCIMAGE: r2: Line 7 5790.6630 2.03362e-06 MDRP_FITARCIMAGE: r2: Line 8 5820.1558 1.19650e-05 Reject MDRP_FITARCIMAGE: r2: Line 9 5852.4880 3.66622e-06 MDRP_FITARCIMAGE: r2: Line 10 5881.8950 3.85562e-06 MDRP_FITARCIMAGE: r2: Line 11 5944.8340 3.21012e-06 MDRP_FITARCIMAGE: r2: Line 12 5965.4710 1.07727e-05 Reject MDRP_FITARCIMAGE: r2: Line 13 6029.9970 1.40323e-06 MDRP_FITARCIMAGE: r2: Line 14 6074.3380 8.54715e-07 MDRP_FITARCIMAGE: r2: Line 15 6096.1630 8.22721e-07 MDRP_FITARCIMAGE: r2: Line 16 6143.0630 7.09527e-07 MDRP_FITARCIMAGE: r2: Line 17 6163.5940 8.51920e-07 MDRP_FITARCIMAGE: r2: Line 18 6217.2810 8.81805e-07 MDRP_FITARCIMAGE: r2: Line 19 6266.4950 8.10287e-07 MDRP_FITARCIMAGE: r2: Line 20 6304.7890 1.52910e-06 MDRP_FITARCIMAGE: r2: Line 21 6334.4280 1.93648e-06 MDRP_FITARCIMAGE: r2: Line 22 6382.9920 2.32462e-06 MDRP_FITARCIMAGE: r2: Line 23 6402.2460 2.36551e-06 MDRP_FITARCIMAGE: r2: Line 24 6438.4700 2.12047e-06 MDRP_FITARCIMAGE: r2: Line 25 6506.5280 2.84347e-06 MDRP_FITARCIMAGE: r2: Line 26 6532.8820 3.12307e-06 MDRP_FITARCIMAGE: r2: Line 27 6598.9530 3.11453e-06 MDRP_FITARCIMAGE: r2: Line 28 6717.0430 3.19462e-06 MDRP_FITARCIMAGE: r2: Line 29 6929.4670 2.44261e-06 MDRP_FITARCIMAGE: r2: Line 30 7032.4128 1.67430e-06 MDRP_FITARCIMAGE: r2: Line 31 7173.9380 1.25611e-06 MDRP_FITARCIMAGE: r2: Line 32 7245.1670 1.21859e-06 MDRP_FITARCIMAGE: r2: Line 33 7438.9000 4.22078e-06 MDRP_FITARCIMAGE: r2: Line 34 7488.8710 5.24358e-06 MDRP_FITARCIMAGE: r2: Line 35 7503.8691 1.11876e-05 Reject MDRP_FITARCIMAGE: r2: Line 36 7514.6518 1.06994e-05 Reject MDRP_FITARCIMAGE: r2: Line 37 7535.7740 6.44862e-06 MDRP_FITARCIMAGE: r2: Line 38 7635.1060 6.71312e-06 MDRP_FITARCIMAGE: r2: Line 39 8014.7860 1.03866e-05 Reject MDRP_FITARCIMAGE: r2: Line 40 8103.6930 9.51392e-06 MDRP_FITARCIMAGE: r2: Line 41 8300.3260 2.79793e-06 MDRP_FITARCIMAGE: r2: Line 42 8377.6065 7.16807e-06 MDRP_FITARCIMAGE: r2: Line 43 8408.2096 9.38211e-06 MDRP_FITARCIMAGE: r2: Line 44 8495.3598 3.20691e-06 MDRP_FITARCIMAGE: r2: Line 45 8521.4422 1.13941e-05 Reject MDRP_FITARCIMAGE: r2: Line 46 8591.2583 3.13371e-06 MDRP_FITARCIMAGE: r2: Line 47 8634.6470 1.66640e-06 MDRP_FITARCIMAGE: r2: Line 48 8654.3831 2.06321e-06 MDRP_FITARCIMAGE: r2: Line 49 8853.8670 1.56421e-06 MDRP_FITARCIMAGE: r2: Line 50 8919.5007 2.45306e-06 MDRP_FITARCIMAGE: r2: Line 51 9122.9674 9.41340e-06 MDRP_FITARCIMAGE: r2: Line 52 9201.7590 2.15064e-06 MDRP_FITARCIMAGE: r2: Line 53 9300.8530 2.28021e-06 MDRP_FITARCIMAGE: r2: Line 54 9313.1386 5.64792e-06 MDRP_FITARCIMAGE: r2: Line 55 9326.5070 2.42213e-06 MDRP_FITARCIMAGE: r2: Line 56 9425.3790 2.73234e-06 MDRP_FITARCIMAGE: r2: Line 57 9459.2100 4.70205e-06 MDRP_FITARCIMAGE: r2: Line 58 9486.6800 4.27858e-06 MDRP_FITARCIMAGE: r2: Line 59 9534.1630 2.87896e-06 MDRP_FITARCIMAGE: r2: Line 60 9547.4000 4.45751e-06 MDRP_FITARCIMAGE: r2: Line 61 9657.7860 1.74287e-05 Reject-RMS MDRP_FITARCIMAGE: r2: Line 62 9665.4240 2.33698e-06 MDRP_FITARCIMAGE: r2: Line 63 9784.5030 1.13811e-05 Reject-RMS MDRP_FITARCIMAGE: r2: Line 64 10139.750 1.29214e-06 XY2TRACESET: r2: Total rejected = 0 MDRP_FITARCIMAGE: r2: Time 125. seconds elapsed MDRP_CALIB: r2: Number of Rejected lamp lines: 1 out of 45 lamp lines EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 13216 pixels XY2TRACESET: r2: Total rejected = 3005 MDRP_FITDISPERSION: r2: Median wavelength widths = 1.01 1.03 1.02 1.02 pix (L B T R) MDRP_CALIB: r2: GOOD ARC!, sdR-r2-00200807.fit MDRP_CALIB: r2: CREATING FIBERFLATS---------------------- MDRP_CALIB: r2: Create fiberflats for flat # 1 of 2 MDRP_CALIB: r2: Flat sdR-r2-00200803.fit paired with arc sdR-r2-00200804.fit MDRP_CALIB: r2: Reading flat sdR-r2-00200803.fit SDSSPROC: r2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r2: Selecting op file boss_pixbias-56859-r2.fits.gz SDSSPROC: r2: Read noise = 2.63805 2.80880 2.72985 2.72188 electrons FINDOPFILE: r2: Selecting op file pixflatave-56859-r2.fits.gz SDSSPROC: r2: Correcting with pixel flat pixflatave-56859-r2.fits.gz FINDOPFILE: r2: Selecting op file badpixels-56859-r2.fits.gz SDSSPROC: r2: Correcting with badpixels badpixels-56859-r2.fits.gz EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 308 pixels MDRP_SUPERFLAT: r2: Wavelength range = 5228.1698 10411.182 MDRP_SUPERFLAT: r2: Creating superflat from 699 fibers MDRP_FIBERFLAT: r2: Number of fiberflat points LE 0 = 723965 ML_QAIFUFLAT: r2: Normalizing to 4th highest value of 1.10444 ML_MATCHMJD: r2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart02/56895 MDRP_CALIB: r2: Create fiberflats for flat # 2 of 2 MDRP_CALIB: r2: Flat sdR-r2-00200808.fit paired with arc sdR-r2-00200807.fit MDRP_CALIB: r2: Reading flat sdR-r2-00200808.fit SDSSPROC: r2: BOSS survey-quality MJD: applying pixbias whether you like it or not! FINDOPFILE: r2: Selecting op file boss_pixbias-56859-r2.fits.gz SDSSPROC: r2: Read noise = 2.75075 2.83138 2.83677 2.72245 electrons FINDOPFILE: r2: Selecting op file pixflatave-56859-r2.fits.gz SDSSPROC: r2: Correcting with pixel flat pixflatave-56859-r2.fits.gz FINDOPFILE: r2: Selecting op file badpixels-56859-r2.fits.gz SDSSPROC: r2: Correcting with badpixels badpixels-56859-r2.fits.gz EXTRACT_IMAGE: r2: LOOPING THROUGH NUMBER OF ROWS TO EXTRACT ---------------- EXTRACT_IMAGE: r2: masked 296 pixels MDRP_SUPERFLAT: r2: Wavelength range = 5229.1335 10412.249 MDRP_SUPERFLAT: r2: Creating superflat from 699 fibers MDRP_FIBERFLAT: r2: Number of fiberflat points LE 0 = 723890 ML_QAIFUFLAT: r2: Normalizing to 4th highest value of 1.09052 ML_MATCHMJD: r2: Using /uufs/chpc.utah.edu/common/home/sdss05/software/svn.sdss.org/repo/manga/mangacore/v1_2_3/ifuflat/cart02/56895 MDRP_CALIB: r2: Writing calibration structure /uufs/chpc.utah.edu/common/home/sdss03/mangawork/manga/spectro/redux/v1_5_4/8330/57179/calibstruct-r2.sav MDRP_CALIB: r2: Elapsed time = 1704. seconds MDRP_REDUCE: r2: FINISHED CALIBRATION--------------- MDRP_REDUCE: r2: CALIB KEYWORD SET. SKIPPING SCIENCE AND ONLY REDUCING CALIBRATION FILES! MDRP_REDUCE: Elapsed time = 1705. seconds MDRP_REDUCE2D: Error. No science extractions were done. Problem with calibration files for camera r2 MDRP_REDUCE2D: Continuing with next camera MDRP_REDUCE2D: Time to extract/sky-sub all cameras = 6602. seconds MDRP_REDUCE2D: CALIB keyword set, or not all cameras processed. Skipping flux calibration. MDRP_REDUCE2D: Time to flux calibration = 0. seconds MDRP_REDUCE2D: Max memory usage = 1573.2 MB MDRP_REDUCE2D: Total time for MDRP_REDUCE2D = 6604. seconds MDRP_REDUCE2D: Successful completion of MDRP_REDUCE2D at Fri Mar 11 15:12:55 2016