/home/sdss3/products/Linux64/sqlalchemy/0.7.10/lib/python2.7/site-packages/sqlalchemy/engine/reflection.py:49: SAWarning: Skipped unsupported reflection of expression-based index q3c_field_idx
  ret = fn(self, con, *args, **kw)
2014-07-03 16:55:52.660Z root             30 Actor.py:110 reading config file /home/sdss3/products/Linux64/apogeeql/v1_5_3a/etc/apogeeql.cfg
new rollover = 51367.34 s from now, at time.struct_time(tm_year=2014, tm_mon=7, tm_mday=4, tm_hour=7, tm_min=12, tm_sec=0, tm_wday=4, tm_yday=185, tm_isdst=0)

2014-07-03 16:55:52.813Z root             30 sdss3logging.py:280 checking for stderr on <logging.StreamHandler object at 0x3e17a90>,<open file '<stderr>', mode 'w' at 0x7f38520fb1e0>
2014-07-03 16:55:52.814Z root             30 sdss3logging.py:287 disabling all but critical stderr output on <logging.StreamHandler object at 0x3e17a90>,<open file '<stderr>', mode 'w' at 0x7f38520fb1e0>
% Compiled module: APQL_WRAPPER.
% Compiled module: APQR_WRAPPER.
% Compiled module: APWAVECAL_CHIP.
% Compiled module: APGETDIR.
% Compiled module: APGUNDEF.
S.
% Compiled module: APGETDIR.
% Compiled module: APGUNDEF.
% Compiled module: ADDSLASH.
% Compiled module: CALDAT.
% Compiled module: CALDAT.
% Compiled module: APFILEINFO.
% Compiled module: APFILEINFO.
% Compiled module: STRSPLIT.
% Compiled module: FIRST_EL.
% Compiled module: HEADFITS.
% Compiled module: FXPOSIT.
% Compiled module: FXMOVE.
% Compiled module: MRD_HREAD.
% Compiled module: FXPAR.
% Compiled module: FXPAR.
% Compiled module: GETTOK.
% Compiled module: VALID_NUM.
% Compiled module: MRD_SKIP.
% Compiled module: MRD_SKIP.
% Compiled module: SXPAR.
% Compiled module: GETMJD5.
% Compiled module: JULDAY.
% Compiled module: JULDAY.
% Compiled module: DATE2JD.
% Compiled module: CHECK_DATEFORMAT.
% Compiled module: REVERSE.
Connecting from apqr_wrapper to apogeeql through: localhost   10039
% Compiled module: MRDFITS.
% Compiled module: MATCH.
% Compiled module: MRD_STRUC
.
% Compiled module: IMPORTASCII.
% Compiled module: STRESS.
% Compiled module: STREP.
% Error opening file. File: 
1 qr Message = PING
% Compiled module: WRITELINE.
% Compiled module: READ_ASCII.
% Compiled module: QUERY_ASCII.
% Compiled module: UNIQ.
Connecting from apql_wrapper to apogeeql through: localhost   10038
% Loaded DLM: IDL_IDLBRIDGE.
2 qr Message = STARTING
% Error opening file. File: 
1 ql Message = PING
% Compiled module: WRITELINE.
2 ql Message = STARTING
3 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
4 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
5 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
6 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
7 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
8 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
9 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
10 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
11 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

12 ql Message = UTR=/data-ql/data/56842/apRaw-12800001-001.fits,70863,1,3
% Compiled module: FITS_READ.
% Compiled module: FITS_OPEN.
% Compiled module: SXDELPAR.
% Compiled module: FITS_CLOSE.
% Compiled module: GET_SQL_COL.
% Compiled module: GET_SQL_SETUP.
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

13 ql Message = UTR=/data-ql/data/56842/apRaw-12800001-002.fits,70863,2,3
% Compiled module: APQL.
Processing /data-ql/data/56842/apRaw-12800001-002.fits
APQL_FITSHEADER ...
% Compiled module: APQL_FITSHEADER.
dt = 0.12026691 sec
% Compiled module: PUSH.
% Compiled module: FILEPATH.
% Compiled module: APQL_DBINSERT.
% Compiled module: GET_SQL_COL.
% Compiled module: GET_SQL_SETUP.
% Compiled module: IDL_SQL_DEFSYSV.
% Restored file: IDL_IDLBRIDGE::EXECUTETIMER.
libGL error: failed to load driver: swrast
libGL error: Try again with LIBGL_DEBUG=verbose for more details.
% Compiled module: XMANAGER.
or  -> apRaw-12800001-002.fits
% Compiled module: EXEC_SQL.
% Compiled module: AVG.
<PtrHeapVar27>  STRUCT    = -> <Anonymous> Array[1]
14 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Inserting S/N information
Inserting exposure_pk information 70863
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

3 qr Message = UTR=DONE,12800001,56842,70863
Number of running qrBridge processes:            1
Number of valid qrBridge objects:            1  res=   1
% Restored file: IDL_IDLBRIDGE::EXECUTETIMER.
% Compiled module: APQUICKRED.
in APQUICKRED
% Compiled module: APGUNDEF.

===============================
Running APOGEE QUICK REDUCTION
===============================
Thu Jul  3 17:45:43 2014
% Compiled module: APGETDIR.
% Compiled module: ADDSLASH.
libGL error: failed to load driver: swrast
libGL error: Try again with LIBGL_DEBUG=verbose for more details.
% Compiled module: XMANAGER.
APQL_FITSHEADER ...
dt = 0.13733602 sec
Directory /data/apogee/quickred/56842/ does NOT exist.  Creating it.
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800001  Nreads=3
-----------------------------------------------------------
Directory /data/apogee/archive/56842/ does NOT exist.  Creating it.

Step 1 - Bundling
-----------------

% Compiled module: APQBUNDLE.
Nfiles = 3 for 12800001
% Compiled module: FITS_READ.
% Compiled module: FITS_OPEN.
<PtrHeapVar30>  STRUCT    = -> <Anonymous> Array[1]
16 ql Message = UTR=DONE
% Compiled module: SXPAR.
Inserting basic information for  -> apRaw-12800001-003.fits
% Compiled module: GETTOK.
% Compiled module: SXDELPAR.
% Compiled module: FITS_CLOSE.
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800001.fits
Inserting S/N information
Inserting exposure_pk information 70863
Inserting required fits keywords error information
% Compiled module: SXADDPAR.
% Compiled module: FITS_ADD_CHECKSUM.
% Compiled module: CHECKSUM32.
% Compiled module: N_BYTES.
% Compiled module: IS_IEEE_BIG.
% Compiled module: FITS_ASCII_ENCODE.
% Compiled module: MWRFITS.
% Compiled module: FXPAR.
% Compiled module: FXADDPAR.
% Compiled module: VALID_NUM.
% Compiled module: FITS_TEST_CHECKSUM.
% Compiled module: HOST_TO_IEEE.
% Compiled module: REVERSE.
% Compiled module: DETABIFY.
dt = 6.9315209 sec

Step 2 - Collapsing the datacube
--------------------------------

% Compiled module: AP3DQUICK.
% Compiled module: HEADFITS.
% Compiled module: FXPOSIT.
% Compiled module: MRD_HREAD.
Processing /data/apogee/archive/56842/apR-a-12800001.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
% Compiled module: MAD.
Using FOWLER sampling. NFOWLER=1
% Compiled module: MEAN.
% Compiled module: MOMENT.
% Compiled module: SXADDHIST.
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800001.fits
Saving FLUX/ERR as LONG instead of FLOAT
% Compiled module: FITS_WRITE.
% Compiled module: MKHDR.
dt = 2.2327712 sec
% Compiled module: PUSH.

Processing /data/apogee/archive/56842/apR-b-12800001.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800001.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 2.4680440 sec

Processing /data/apogee/archive/56842/apR-c-12800001.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800001.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 2.2594640 sec


Step 3 - Extracting the spectra
-------------------------------
Cannot do extraction for EXPTYPE=DARK
% Compiled module: APFILEINFO.
% Compiled module: STRSPLIT.
% Compiled module: FIRST_EL.
% Compiled module: FXMOVE.
% Compiled module: MRD_SKIP.
% Compiled module: GETMJD5.
% Compiled module: JULDAY.
% Compiled module: DATE2JD.
% Compiled module: CHECK_DATEFORMAT.

Step 4 - Compressing files
--------------------------

Compressing the bundled files
% Compiled module: APZIP.
% Compiled module: LOADINPUT.
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800001.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
% Compiled module: MKTEMP.
Step II: Subtracting average dCounts
% Compiled module: MRDFITS.
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 20018880 bytes
Compression ratio = 1.57373
dt = 7.9653759 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800001.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19445760 bytes
Compression ratio = 1.62011
dt = 10.740469 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800001.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19327680 bytes
Compression ratio = 1.63001
dt = 11.740129 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800001.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800001.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800001.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800001.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800001.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800001.fits.

Step 5 - Database prep and insert
--------------------------

% Compiled module: APQUICKRED_DBPREP.
% Compiled module: ZSCALE.
% Compiled module: GOODPOLY.
% Compiled module: BADPAR.
% Compiled module: POLY_FIT.
% Compiled module: STDEV.
% Compiled module: POLY.
% Compiled module: APQUICKRED_DBINSERT.
starting apquickred_dbinsert ...
% Compiled module: GET_SQL_COL.
% Compiled module: GET_SQL_SETUP.
% Compiled module: IDL_SQL_DEFSYSV.
Inserting Quickred data
% Compiled module: REPSTR.
% Compiled module: EXEC_SQL.
% Compiled module: SET_SQL_COLARRAY.
Inserting Quickred IMBINZOOM
Inserting exposure header information
apquickred_dbinsert completed
dt = 5.1094480 sec.
dt = 53.627735 sec
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

17 ql Message = UTR=/data-ql/data/56842/apRaw-12800002-001.fits,70864,1,3
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

18 ql Message = UTR=/data-ql/data/56842/apRaw-12800002-002.fits,70864,2,3
Processing /data-ql/data/56842/apRaw-12800002-002.fits
APQL_FITSHEADER ...
dt = 0.13361788 sec
<PtrHeapVar34>  STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800002-002.fits
Inserting S/N information
Inserting exposure_pk information 70864
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

4 qr Message = UTR=DONE,12800002,56842,70864
Number of running qrBridge processes:            1
Number of valid qrBridge objects
            1  res=   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Thu Jul  3 17:47:10 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800002  Nreads=3
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 3 for 12800002
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800002.fits
APQL_FITSHEADER ...
dt = 0.15854096 sec
<PtrHeapVar37>  STRUCT    = -> <Anonymous> Array[1]
20 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800002-003.fits
Inserting S/N information
Inserting exposure_pk information 70864
Inserting required fits keywords error information
dt = 5.0514669 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800002.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800002.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 1.9902442 sec

Processing /data/apogee/archive/56842/apR-b-12800002.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800002.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 1.9834011 sec

Processing /data/apogee/archive/56842/apR-c-12800002.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800002.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 4.1280100 sec


Step 3 - Extracting the spectra
-------------------------------
Cannot do extraction for EXPTYPE=DARK

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800002.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19969920 bytes
Compression ratio = 1.57759
dt = 8.9213481 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800002.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19391040 bytes
Compression ratio = 1.62468
dt = 9.1984229 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800002.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19229760 bytes
Compression ratio = 1.63831
dt = 6.5910010 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800002.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800002.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800002.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800002.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800002.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800002.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Inserting exposure header information
apquickred_dbinsert completed
dt = 3.9638269 sec.
dt = 46.831027 sec
21 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
22 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

23 ql Message = UTR=/data-ql/data/56842/apRaw-12800003-001.fits,70865,1,5
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

24 ql Message = UTR=/data-ql/data/56842/apRaw-12800003-002.fits,70865,2,5
Processing /data-ql/data/56842/apRaw-12800003-002.fits
APEXTRACT...
% Compiled module: APEXTRACT.
% Compiled module: POLY.
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
% Compiled module: APQL_SNRMAG.
300 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300
snr_standard =       0.00000
logsnr_hmag_coef =       0.00000      0.00000
% Compiled module: POLY_FIT.
APQL_FITSHEADER ...
dt = 2.0490952 sec
% Program caused arithmetic error: Floating divide by 0
<PtrHeapVar42>  LONG      = Array[300]
<PtrHeapVar43>  STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800003-002.fits
Inserting S/N information
% Compiled module: SET_SQL_COLARRAY.
Inserting exposure_pk information 70865
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

25 ql Message = UTR=/data-ql/data/56842/apRaw-12800003-003.fits,70865,3,5
Processing /data-ql/data/56842/apRaw-12800003-003.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
19 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 259
snr_standard =       69.2647
logsnr_hmag_coef =       0.00000      0.00000
% Compiled module: AP_ROBUST_POLY_FIT.
% Compiled module: ROB_CHECKFIT.
% Compiled module: ROBUST_SIGMA.
APQL_FITSHEADER ...
dt = 3.3185408 sec
<PtrHeapVar47>  LONG      = Array[19]
<PtrHeapVar48>  STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800003-003.fits
Inserting S/N information
Inserting exposure_pk information 70865
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

26 ql Message = UTR=/data-ql/data/56842/apRaw-12800003-004.fits,70865,4,5
Processing /data-ql/data/56842/apRaw-12800003-004.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       70.2687
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.9307392 sec
<PtrHeapVar52>  LONG      = Array[1]
<PtrHeapVar53>  STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800003-004.fits
Inserting S/N information
Inserting exposure_pk information 70865
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

5 qr Message = UTR=DONE,12800003,56842,70865
Number of running qrBridge processes:            1
Number of valid qrBridge objects:            1  res=   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Thu Jul  3 17:53:20 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800003  Nreads=5
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 5 for 12800003
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800003.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       70.2754
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.1951389 sec
<PtrHeapVar57>  LONG      = Array[1]
<PtrHeapVar58>  STRUCT    = -> <Anonymous> Array[1]
28 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800003-005.fits
Inserting S/N information
Inserting exposure_pk information 70865
Inserting required fits keywords error information
dt = 10.540090 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800003.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800003.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.6105230 sec

Processing /data/apogee/archive/56842/apR-b-12800003.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800003.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.8052070 sec

Processing /data/apogee/archive/56842/apR-c-12800003.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800003.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.1528120 sec


Step 3 - Extracting the spectra
-------------------------------
% Compiled module: AP2DPROC.

Extracting file /data/apogee/quickred/56842/12800003
--------------------------------------------------
MJD5 = 56842
% Compiled module: APLOADFRAME.
 Processing chip a - ap2D-a-12800003.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-a-09710014.fits
% Compiled module: MATCH.
% Compiled module: MRD_STRUCT.
% Compiled module: GFUNC.
% Compiled module: C_CORRELATE.
% Compiled module: MAXLOC.
% Compiled module: MPFITPEAK.
% Compiled module: MPFIT.
% Compiled module: MPFITFUN.
% Compiled module: STRINGIZE.
Recentering shift = -0.099
Using Gaussian PSF fitting Extraction
% Compiled module: TRACESET2XY.
% Compiled module: TAG_EXIST.
% Compiled module: DJS_LAXISGEN.
% Compiled module: FPOLY.
% Compiled module: FLEGENDRE.
% Compiled module: AP_EXTRACT_IMAGE.
 ROW NITER SIG(med) CHI^2
% Compiled module: AP_EXTRACT_ROW.
% Compiled module: IDLUTILS_SO_EXT.
% Compiled module: FILEPATH.
% Compiled module: PIXELMASK_BITS.
% Compiled module: SDSS_FLAGVAL.
% Compiled module: YANNY_READ.
% Compiled module: FILEANDPATH.
% Compiled module: FDECOMP.
% Compiled module: NUMLINES.
% Compiled module: HOGG_UNQUOTED_REGEX.
% Compiled module: HOGG_STRSPLIT.
% Compiled module: YANNY_FREE.
% Compiled module: CALCFLUX.
% Compiled module: SPLOG.
% Compiled module: STR_SEP.
  AP_EXTRACT_IMAGE: masked  1235 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-a-12800003.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-a-12800003.fits

 Processing chip b - ap2D-b-12800003.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-b-09710014.fits
Recentering shift = -0.123
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  2147 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-b-12800003.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-b-12800003.fits

 Processing chip c - ap2D-c-12800003.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-c-09710014.fits
Recentering shift = -0.127
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1232 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-c-12800003.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-c-12800003.fits
AP2PROC finished

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800003.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28854720 bytes
Compression ratio = 1.81944
dt = 10.098314 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800003.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28391040 bytes
Compression ratio = 1.84916
dt = 9.8815739 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800003.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28275840 bytes
Compression ratio = 1.85669
dt = 10.585688 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800003.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800003.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800003.fits
Compressing the 1D spectral files with FPACK
Compressing /data/apogee/quickred/56842/ap1D-a-12800003.fits
Compressing /data/apogee/quickred/56842/ap1D-b-12800003.fits
Compressing /data/apogee/quickred/56842/ap1D-c-12800003.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800003.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800003.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800003.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Inserting Quickred SPECTRUM
Inserting exposure header information
apquickred_dbinsert completed
dt = 32.800540 sec.
dt = 116.05995 sec
% Program caused arithmetic error: Floating underflow
29 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
30 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
31 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

32 ql Message = UTR=/data-ql/data/56842/apRaw-12800004-001.fits,70866,1,5
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

33 ql Message = UTR=/data-ql/data/56842/apRaw-12800004-002.fits,70866,2,5
Processing /data-ql/data/56842/apRaw-12800004-002.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
300 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300
snr_standard =       0.00000
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.7253790 sec
% Program caused arithmetic error: Floating divide by 0
<PtrHeapVar63>  LONG      = Array[300]
<PtrHeapVar64>  STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800004-002.fits
Inserting S/N information
Inserting exposure_pk information 70866
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

34 ql Message = UTR=/data-ql/data/56842/apRaw-12800004-003.fits,70866,3,5
Processing /data-ql/data/56842/apRaw-12800004-003.fits
APEXTRACT...
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
18 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 259
snr_standard =       69.6364
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.5983119 sec
<PtrHeapVar68>  LONG      = Array[18]
<PtrHeapVar69>  STRUCT    = -> <Anonymous> Array[1]
35 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Inserting basic information for  -> apRaw-12800004-003.fits
Inserting S/N information
Inserting exposure_pk information 70866
Inserting required fits keywords error information
36 ql Message = UTR=/data-ql/data/56842/apRaw-12800004-004.fits,70866,4,5
Processing /data-ql/data/56842/apRaw-12800004-004.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       70.7910
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 4.7601609 sec
<PtrHeapVar73>  LONG      = Array[1]
<PtrHeapVar74>  STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800004-004.fits
Inserting S/N information
Inserting exposure_pk information 70866
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

6 qr Message = UTR=DONE,12800004,56842,70866
Number of running qrBridge processes:            1
Number of valid qrBridge objects:            1  res=   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Thu Jul  3 18:00:52 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800004  Nreads=5
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 5 for 12800004
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800004.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       70.6912
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.0744100 sec
<PtrHeapVar78>  LONG      = Array[1]
<PtrHeapVar79>  STRUCT    = -> <Anonymous> Array[1]
38 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800004-005.fits
Inserting S/N information
Inserting exposure_pk information 70866
Inserting required fits keywords error information
dt = 18.453956 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800004.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800004.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 5.3621309 sec

Processing /data/apogee/archive/56842/apR-b-12800004.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
39 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800004.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 5.5433030 sec

Processing /data/apogee/archive/56842/apR-c-12800004.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800004.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 4.2016830 sec


Step 3 - Extracting the spectra
-------------------------------

Extracting file /data/apogee/quickred/56842/12800004
--------------------------------------------------
MJD5 = 56842
 Processing chip a - ap2D-a-12800004.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-a-09710014.fits
Recentering shift = -0.104
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1170 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-a-12800004.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-a-12800004.fits

 Processing chip b - ap2D-b-12800004.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-b-09710014.fits
Recentering shift = -0.125
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  2158 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-b-12800004.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-b-12800004.fits

 Processing chip c - ap2D-c-12800004.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-c-09710014.fits
Recentering shift = -0.135
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1327 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-c-12800004.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-c-12800004.fits
AP2PROC finished

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800004.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28860480 bytes
Compression ratio = 1.81908
dt = 12.308900 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800004.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28399680 bytes
Compression ratio = 1.84860
dt = 20.959358 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800004.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28296000 bytes
Compression ratio = 1.85537
dt = 12.977276 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800004.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800004.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800004.fits
Compressing the 1D spectral files with FPACK
Compressing /data/apogee/quickred/56842/ap1D-a-12800004.fits
Compressing /data/apogee/quickred/56842/ap1D-b-12800004.fits
Compressing /data/apogee/quickred/56842/ap1D-c-12800004.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800004.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800004.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800004.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Inserting Quickred SPECTRUM
Inserting exposure header information
apquickred_dbinsert completed
dt = 39.768423 sec.
dt = 158.96308 sec
% Program caused arithmetic error: Floating underflow
40 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
41 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
42 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
43 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
44 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
45 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
46 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
47 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
48 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
49 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
50 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
51 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
52 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
53 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
54 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
55 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
56 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
57 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

58 ql Message = UTR=/data-ql/data/56842/apRaw-12800005-001.fits,70867,1,3
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

59 ql Message = UTR=/data-ql/data/56842/apRaw-12800005-002.fits,70867,2,3
Processing /data-ql/data/56842/apRaw-12800005-002.fits
APQL_FITSHEADER ...
dt = 0.14535594 sec
<PtrHeapVar83>  STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800005-002.fits
Inserting S/N information
Inserting exposure_pk information 70867
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

7 qr Message = UTR=DONE,12800005,56842,70867
Number of running qrBridge processes:            1
Number of valid qrBridge objects:            1  res=   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Thu Jul  3 19:35:00 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800005  Nreads=3
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 3 for 12800005
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800005.fits
APQL_FITSHEADER ...
dt = 0.17176318 sec
<PtrHeapVar86>  STRUCT    = -> <Anonymous> Array[1]
61 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800005-003.fits
Inserting S/N information
Inserting exposure_pk information 70867
Inserting required fits keywords error information
dt = 8.0382760 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800005.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800005.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 4.2772479 sec

Processing /data/apogee/archive/56842/apR-b-12800005.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800005.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 4.4043219 sec

Processing /data/apogee/archive/56842/apR-c-12800005.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800005.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.7281060 sec


Step 3 - Extracting the spectra
-------------------------------
Cannot do extraction for EXPTYPE=DARK

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800005.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19990080 bytes
Compression ratio = 1.57600
dt = 10.314123 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800005.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
62 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19408320 bytes
Compression ratio = 1.62324
dt = 6.3234270 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800005.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19281600 bytes
Compression ratio = 1.63391
dt = 5.6872301 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800005.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800005.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800005.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800005.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800005.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800005.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Inserting exposure header information
apquickred_dbinsert completed
dt = 5.6409328 sec.
dt = 52.868475 sec
63 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

64 ql Message = UTR=/data-ql/data/56842/apRaw-12800006-001.fits,70868,1,5
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

65 ql Message = UTR=/data-ql/data/56842/apRaw-12800006-002.fits,70868,2,5
Processing /data-ql/data/56842/apRaw-12800006-002.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
300 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300
snr_standard =       0.00000
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.2516050 sec
% Program caused arithmetic error: Floating divide by 0
<PtrHeapVar91>  LONG      = Array[300]
<PtrHeapVar92>  STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800006-002.fits
Inserting S/N information
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

Inserting exposure_pk information 70868
Inserting required fits keywords error information
66 ql Message = UTR=/data-ql/data/56842/apRaw-12800006-003.fits,70868,3,5
Processing /data-ql/data/56842/apRaw-12800006-003.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
20 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 110, 112, 259
snr_standard =       69.5522
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.9742410 sec
<PtrHeapVar96>  LONG      = Array[20]
<PtrHeapVar97>  STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800006-003.fits
Inserting S/N information
Inserting exposure_pk information 70868
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

67 ql Message = UTR=/data-ql/data/56842/apRaw-12800006-004.fits,70868,4,5
Processing /data-ql/data/56842/apRaw-12800006-004.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
3 missing fibers: 110, 112, 259
snr_standard =       70.7059
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.9897170 sec
<PtrHeapVar101> LONG      = Array[3]
<PtrHeapVar102> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800006-004.fits
Inserting S/N information
Inserting exposure_pk information 70868
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

8 qr Message = UTR=DONE,12800006,56842,70868
Number of running qrBridge processes:            1
Number of valid qrBridge objects:            1  res=   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Thu Jul  3 19:37:48 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800006  Nreads=5
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 5 for 12800006
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800006.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
3 missing fibers: 110, 112, 259
snr_standard =       70.7353
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.2142510 sec
<PtrHeapVar106> LONG      = Array[3]
<PtrHeapVar107> STRUCT    = -> <Anonymous> Array[1]
69 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800006-005.fits
Inserting S/N information
Inserting exposure_pk information 70868
Inserting required fits keywords error information
dt = 7.6636460 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800006.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800006.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 2.5550280 sec

Processing /data/apogee/archive/56842/apR-b-12800006.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800006.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.9328771 sec

Processing /data/apogee/archive/56842/apR-c-12800006.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800006.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.3983440 sec


Step 3 - Extracting the spectra
-------------------------------

Extracting file /data/apogee/quickred/56842/12800006
--------------------------------------------------
MJD5 = 56842
 Processing chip a - ap2D-a-12800006.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-a-09710014.fits
Recentering shift = -0.096
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1240 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-a-12800006.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-a-12800006.fits

 Processing chip b - ap2D-b-12800006.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-b-09710014.fits
Recentering shift = -0.110
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  2291 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-b-12800006.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-b-12800006.fits

 Processing chip c - ap2D-c-12800006.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-c-09710014.fits
Recentering shift = -0.114
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1133 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-c-12800006.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-c-12800006.fits
AP2PROC finished

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800006.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28848960 bytes
Compression ratio = 1.81981
dt = 10.862326 sec

2/3

70 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Compressing >>/data/apogee/archive/56842/apR-b-12800006.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28382400 bytes
Compression ratio = 1.84972
dt = 13.467061 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800006.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
71 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28281600 bytes
Compression ratio = 1.85631
dt = 11.818880 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800006.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800006.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800006.fits
Compressing the 1D spectral files with FPACK
Compressing /data/apogee/quickred/56842/ap1D-a-12800006.fits
Compressing /data/apogee/quickred/56842/ap1D-b-12800006.fits
Compressing /data/apogee/quickred/56842/ap1D-c-12800006.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800006.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800006.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800006.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Inserting Quickred SPECTRUM
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

72 ql Message = UTR=/data-ql/data/56842/apRaw-12800007-001.fits,70869,1,5
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

73 ql Message = UTR=/data-ql/data/56842/apRaw-12800007-002.fits,70869,2,5
Processing /data-ql/data/56842/apRaw-12800007-002.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
300 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300
snr_standard =       0.00000
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.5860620 sec
% Program caused arithmetic error: Floating divide by 0
<PtrHeapVar112> LONG      = Array[300]
<PtrHeapVar113> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800007-002.fits
Inserting S/N information
Inserting exposure_pk information 70869
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

74 ql Message = UTR=/data-ql/data/56842/apRaw-12800007-003.fits,70869,3,5
Processing /data-ql/data/56842/apRaw-12800007-003.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
21 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 110, 112, 259
snr_standard =       69.1493
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 4.0160301 sec
<PtrHeapVar117> LONG      = Array[21]
<PtrHeapVar118> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800007-003.fits
Inserting S/N information
Inserting exposure_pk information 70869
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

75 ql Message = UTR=/data-ql/data/56842/apRaw-12800007-004.fits,70869,4,5
Processing /data-ql/data/56842/apRaw-12800007-004.fits
APEXTRACT...
Inserting exposure header information
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
3 missing fibers: 110, 112, 259
snr_standard =       70.4118
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.9814460 sec
<PtrHeapVar122> LONG      = Array[3]
<PtrHeapVar123> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800007-004.fits
Inserting S/N information
Inserting exposure_pk information 70869
Inserting required fits keywords error information
apquickred_dbinsert completed
dt = 44.111355 sec.
dt = 130.26863 sec
% Program caused arithmetic error: Floating underflow
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

9 qr Message = UTR=DONE,12800007,56842,70869
Number of running qrBridge processes:            1
Number of valid qrBridge objects
            1  res=   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Thu Jul  3 19:40:04 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800007  Nreads=5
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 5 for 12800007
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800007.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
3 missing fibers: 110, 112, 259
snr_standard =       70.3088
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.9942009 sec
<PtrHeapVar127> LONG      = Array[3]
<PtrHeapVar128> STRUCT    = -> <Anonymous> Array[1]
77 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800007-005.fits
Inserting S/N information
Inserting exposure_pk information 70869
Inserting required fits keywords error information
dt = 8.6175740 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800007.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800007.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.6955578 sec

Processing /data/apogee/archive/56842/apR-b-12800007.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800007.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.9915912 sec

Processing /data/apogee/archive/56842/apR-c-12800007.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800007.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 4.5940549 sec


Step 3 - Extracting the spectra
-------------------------------

Extracting file /data/apogee/quickred/56842/12800007
--------------------------------------------------
MJD5 = 56842
 Processing chip a - ap2D-a-12800007.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-a-09710014.fits
Recentering shift = -0.100
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
78 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
  AP_EXTRACT_IMAGE: masked  1208 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-a-12800007.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-a-12800007.fits

 Processing chip b - ap2D-b-12800007.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-b-09710014.fits
Recentering shift = -0.118
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  2485 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-b-12800007.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-b-12800007.fits

 Processing chip c - ap2D-c-12800007.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-c-09710014.fits
Recentering shift = -0.124
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1138 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-c-12800007.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-c-12800007.fits
AP2PROC finished

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800007.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28886400 bytes
Compression ratio = 1.81745
dt = 11.945560 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800007.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
79 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Input file size = 52499520 bytes
Output file size = 28425600 bytes
Compression ratio = 1.84691
dt = 11.387179 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800007.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28284480 bytes
Compression ratio = 1.85612
dt = 11.377358 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800007.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800007.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800007.fits
Compressing the 1D spectral files with FPACK
Compressing /data/apogee/quickred/56842/ap1D-a-12800007.fits
Compressing /data/apogee/quickred/56842/ap1D-b-12800007.fits
Compressing /data/apogee/quickred/56842/ap1D-c-12800007.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800007.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800007.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800007.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Inserting Quickred SPECTRUM
Inserting exposure header information
apquickred_dbinsert completed
dt = 42.520345 sec.
dt = 128.59597 sec
% Program caused arithmetic error: Floating underflow
80 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
81 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
82 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
83 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
84 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
85 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
86 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
87 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
88 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
89 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
90 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
91 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
92 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
93 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
94 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
95 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
96 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
97 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
98 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
99 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
100 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
101 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
102 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
103 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
104 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
105 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
106 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
107 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
108 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
109 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
110 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
111 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
112 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
113 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
114 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
115 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
116 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
117 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
118 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
119 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
120 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
121 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
122 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
123 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
124 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
125 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
126 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
127 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
128 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
129 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
130 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
131 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
132 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
133 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
134 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
135 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
136 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
137 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

138 ql Message = UTR=/data-ql/data/56842/apRaw-12800008-001.fits,70870,1,3
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

139 ql Message = UTR=/data-ql/data/56842/apRaw-12800008-002.fits,70870,2,3
Processing /data-ql/data/56842/apRaw-12800008-002.fits
APQL_FITSHEADER ...
dt = 0.14834094 sec
<PtrHeapVar132> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800008-002.fits
Inserting S/N information
Inserting exposure_pk information 70870
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

10 qr Message = UTR=DONE,12800008,56842,70870
Number of running qrBridge processes:            1
Number of valid qrBridge objects:            1  res=   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Fri Jul  4 00:31:02 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800008  Nreads=3
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 3 for 12800008
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800008.fits
APQL_FITSHEADER ...
dt = 0.18650198 sec
<PtrHeapVar135> STRUCT    = -> <Anonymous> Array[1]
141 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800008-003.fits
Inserting S/N information
Inserting exposure_pk information 70870
Inserting required fits keywords error information
dt = 5.4863770 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800008.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800008.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.8149838 sec

Processing /data/apogee/archive/56842/apR-b-12800008.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800008.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 2.0280118 sec

Processing /data/apogee/archive/56842/apR-c-12800008.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800008.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 1.8695700 sec


Step 3 - Extracting the spectra
-------------------------------
Cannot do extraction for EXPTYPE=DARK

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800008.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 20013120 bytes
Compression ratio = 1.57418
dt = 5.6718490 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800008.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19434240 bytes
Compression ratio = 1.62107
dt = 5.7233889 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800008.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 31504320 bytes
Output file size = 19321920 bytes
Compression ratio = 1.63050
dt = 5.4631710 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800008.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800008.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800008.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800008.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800008.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800008.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Inserting exposure header information
apquickred_dbinsert completed
dt = 11.034680 sec.
dt = 44.704555 sec
142 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

143 ql Message = UTR=/data-ql/data/56842/apRaw-12800009-001.fits,70871,1,5
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

144 ql Message = UTR=/data-ql/data/56842/apRaw-12800009-002.fits,70871,2,5
Processing /data-ql/data/56842/apRaw-12800009-002.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
300 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300
snr_standard =       0.00000
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.2675152 sec
% Program caused arithmetic error: Floating divide by 0
<PtrHeapVar140> LONG      = Array[300]
<PtrHeapVar141> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800009-002.fits
Inserting S/N information
Inserting exposure_pk information 70871
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

145 ql Message = UTR=/data-ql/data/56842/apRaw-12800009-003.fits,70871,3,5
Processing /data-ql/data/56842/apRaw-12800009-003.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
20 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 259
snr_standard =       68.7538
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.8968611 sec
<PtrHeapVar145> LONG      = Array[20]
<PtrHeapVar146> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800009-003.fits
Inserting S/N information
Inserting exposure_pk information 70871
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

146 ql Message = UTR=/data-ql/data/56842/apRaw-12800009-004.fits,70871,4,5
Processing /data-ql/data/56842/apRaw-12800009-004.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       69.6471
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.1952851 sec
<PtrHeapVar150> LONG      = Array[1]
<PtrHeapVar151> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800009-004.fits
Inserting S/N information
Inserting exposure_pk information 70871
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

11 qr Message = UTR=DONE,12800009,56842,70871
Number of running qrBridge processes:            1
Number of valid qrBridge objects:            1  res=   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Fri Jul  4 00:32:49 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800009  Nreads=5
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 5 for 12800009
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800009.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       69.6567
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.0267601 sec
<PtrHeapVar155> LONG      = Array[1]
<PtrHeapVar156> STRUCT    = -> <Anonymous> Array[1]
148 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800009-005.fits
Inserting S/N information
Inserting exposure_pk information 70871
Inserting required fits keywords error information
dt = 10.675948 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800009.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800009.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 4.9620550 sec

Processing /data/apogee/archive/56842/apR-b-12800009.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800009.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 5.3219261 sec

Processing /data/apogee/archive/56842/apR-c-12800009.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800009.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 5.5035350 sec


Step 3 - Extracting the spectra
-------------------------------

Extracting file /data/apogee/quickred/56842/12800009
--------------------------------------------------
MJD5 = 56842
149 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
 Processing chip a - ap2D-a-12800009.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-a-09710014.fits
Recentering shift = -0.047
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1496 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-a-12800009.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-a-12800009.fits

 Processing chip b - ap2D-b-12800009.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-b-09710014.fits
Recentering shift = -0.065
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  2679 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-b-12800009.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-b-12800009.fits

 Processing chip c - ap2D-c-12800009.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-c-09710014.fits
Recentering shift = -0.072
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1334 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-c-12800009.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-c-12800009.fits
AP2PROC finished

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800009.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
150 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28817280 bytes
Compression ratio = 1.82181
dt = 13.797017 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800009.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

Step II: Subtracting average dCounts
151 ql Message = UTR=/data-ql/data/56842/apRaw-12800010-001.fits,70872,1,5
Step III: Compressing with fpack
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

Input file size = 52499520 bytes
Output file size = 28342080 bytes
Compression ratio = 1.85235
dt = 12.896620 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800009.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
152 ql Message = UTR=/data-ql/data/56842/apRaw-12800010-002.fits,70872,2,5
Processing /data-ql/data/56842/apRaw-12800010-002.fits
APEXTRACT...
Step II: Subtracting average dCounts
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
300 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300
snr_standard =       0.00000
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.6097412 sec
% Program caused arithmetic error: Floating divide by 0
<PtrHeapVar161> LONG      = Array[300]
<PtrHeapVar162> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800010-002.fits
Inserting S/N information
Inserting exposure_pk information 70872
Inserting required fits keywords error information
Step III: Compressing with fpack
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

153 ql Message = UTR=/data-ql/data/56842/apRaw-12800010-003.fits,70872,3,5
Processing /data-ql/data/56842/apRaw-12800010-003.fits
Input file size = 52499520 bytes
Output file size = 28264320 bytes
Compression ratio = 1.85745
dt = 15.215295 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800009.fits
APEXTRACT...
Compressing /data/apogee/quickred/56842/ap2D-b-12800009.fits
APEXTRACT...
Compressing /data/apogee/quickred/56842/ap2D-c-12800009.fits
APEXTRACT...
Compressing the 1D spectral files with FPACK
Compressing /data/apogee/quickred/56842/ap1D-a-12800009.fits
Compressing /data/apogee/quickred/56842/ap1D-b-12800009.fits
APQL_SNRMAG ...
18 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 259
snr_standard =       69.5821
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.1299431 sec
<PtrHeapVar166> LONG      = Array[18]
<PtrHeapVar167> STRUCT    = -> <Anonymous> Array[1]
Compressing /data/apogee/quickred/56842/ap1D-c-12800009.fit

Inserting S/N information
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800009.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800009.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800009.fits.

Step 5 - Database prep and insert
--------------------------

Inserting exposure_pk information 70872
Inserting required fits keywords error information
starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

Inserting Quickred SPECTRUM
154 ql Message = UTR=/data-ql/data/56842/apRaw-12800010-004.fits,70872,4,5
Processing /data-ql/data/56842/apRaw-12800010-004.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       70.5588
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.9282141 sec
<PtrHeapVar171> LONG      = Array[1]
<PtrHeapVar172> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800010-004.fits
Inserting S/N information
Inserting exposure_pk information 70872
Inserting required fits keywords error information
Card is too long, comment will be truncated.
Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFX' card to meet the FITS standard.
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).  Fixed 'BOREOFFY' card to meet the FITS standard.
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFX' card to meet the FITS standard.
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFY' card to meet the FITS standard.
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).  Fixed 'CALOFFR' card to meet the FITS standard.
Note: PyFITS uses zero-based indexing.

Output verification result:
HDU 0:
    Card 84:
        Card 'BOREOFFX' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 85:
        Card 'BOREOFFY' is not FITS standard (invalid value string: NAN.0 / TCC Boresight offset, deg).
    Card 90:
        Card 'CALOFFX' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 91:
        Card 'CALOFFY' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
    Card 92:
        Card 'CALOFFR' is not FITS standard (invalid value string: NAN.0 / TCC CalibOff, deg).
Note: PyFITS uses zero-based indexing.

12 qr Message = UTR=DONE,12800010,56842,70872
Number of running qrBridge processes:            1
Number of valid qrBridge objects:            1  res=   1
---------> Starting a new apquickred Bridge
APEXTRACT...
% Error opening file. File: 
% Compiled module: APQUICKRED.
in APQUICKRED
% Compiled module: APGUNDEF.

===============================
Running APOGEE QUICK REDUCTION
===============================
Fri Jul  4 00:34:51 2014
% Compiled module: APGETDIR.
% Compiled module: ADDSLASH.
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800010  Nreads=5
-----------------------------------------------------------

Step 1 - Bundling
-----------------

% Compiled module: APQBUNDLE.
Nfiles = 5 for 12800010
% Compiled module: FITS_READ.
% Compiled module: FITS_OPEN.
% Compiled module: SXPAR.
% Compiled module: GETTOK.
% Compiled module: SXDELPAR.
APEXTRACT...
% Compiled module: FITS_CLOSE.
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800010.fits
% Compiled module: SXADDPAR.
% Compiled module: FITS_ADD_CHECKSUM.
% Compiled module: CHECKSUM32.
% Compiled module: N_BYTES.
% Compiled module: IS_IEEE_BIG.
% Compiled module: FITS_ASCII_ENCODE.
% Compiled module: MWRFITS.
% Compiled module: FXPAR.
% Compiled module: FXADDPAR.
% Compiled module: VALID_NUM.
APEXTRACT...
% Compiled module: FITS_TEST_CHECKSUM.
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       70.5373
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.2813470 sec
<PtrHeapVar176> LONG      = Array[1]
<PtrHeapVar177> STRUCT    = -> <Anonymous> Array[1]
156 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800010-005.fits
Inserting S/N information
% Compiled module: HOST_TO_IEEE.
% Compiled module: REVERSE.
Inserting exposure_pk information 70872
Inserting required fits keywords error information
% Compiled module: DETABIFY.
157 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
dt = 19.243283 sec

Step 2 - Collapsing the datacube
--------------------------------

% Compiled module: AP3DQUICK.
% Compiled module: HEADFITS.
% Compiled module: FXPOSIT.
% Compiled module: MRD_HREAD.
Processing /data/apogee/archive/56842/apR-a-12800010.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
% Compiled module: MAD.
Using FOWLER sampling. NFOWLER=2
% Compiled module: MEAN.
% Compiled module: MOMENT.
% Compiled module: SXADDHIST.
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800010.fits
Saving FLUX/ERR as LONG instead of FLOAT
% Compiled module: FITS_WRITE.
% Compiled module: MKHDR.
dt = 6.9151111 sec
% Compiled module: PUSH.

Processing /data/apogee/archive/56842/apR-b-12800010.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800010.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 2.6908901 sec

Processing /data/apogee/archive/56842/apR-c-12800010.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800010.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.6940751 sec


Step 3 - Extracting the spectra
-------------------------------
% Compiled module: AP2DPROC.
% Compiled module: APFILEINFO.
% Compiled module: STRSPLIT.
% Compiled module: FIRST_EL.
% Compiled module: FXMOVE.
% Compiled module: MRD_SKIP.
% Compiled module: GETMJD5.
% Compiled module: JULDAY.
% Compiled module: DATE2JD.
% Compiled module: CHECK_DATEFORMAT.

Extracting file /data/apogee/quickred/56842/12800010
--------------------------------------------------
MJD5 = 56842
% Compiled module: APLOADFRAME.
Inserting exposure header information
 Processing chip a - ap2D-a-12800010.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-a-09710014.fits
% Compiled module: MRDFITS.
% Compiled module: MATCH.
% Compiled module: MRD_STRUCT.
% Compiled module: POLY.
% Compiled module: GFUNC.
% Compiled module: C_CORRELATE.
% Compiled module: MAXLOC.
% Compiled module: MPFITPEAK.
% Compiled module: MPFIT.
% Compiled module: MPFITFUN.
% Compiled module: STRINGIZE.
Recentering shift = -0.049
Using Gaussian PSF fitting Extraction
% Compiled module: TRACESET2XY.
% Compiled module: TAG_EXIST.
% Compiled module: DJS_LAXISGEN.
% Compiled module: FPOLY.
% Compiled module: FLEGENDRE.
% Compiled module: AP_EXTRACT_IMAGE.
 ROW NITER SIG(med) CHI^2
% Compiled module: AP_EXTRACT_ROW.
% Compiled module: IDLUTILS_SO_EXT.
% Compiled module: FILEPATH.
% Compiled module: PIXELMASK_BITS.
% Compiled module: SDSS_FLAGVAL.
% Compiled module: YANNY_READ.
% Compiled module: FILEANDPATH.
% Compiled module: FDECOMP.
% Compiled module: NUMLINES.
% Compiled module: HOGG_UNQUOTED_REGEX.
% Compiled module: HOGG_STRSPLIT.
% Compiled module: YANNY_FREE.
% Compiled module: CALCFLUX.
apquickred_dbinsert completed
dt = 56.928560 sec.
dt = 164.23922 sec
% Program caused arithmetic error: Floating underflow
158 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
% Compiled module: SPLOG.
% Compiled module: STR_SEP.
  AP_EXTRACT_IMAGE: masked  1201 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-a-12800010.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-a-12800010.fits

 Processing chip b - ap2D-b-12800010.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-b-09710014.fits
Recentering shift = -0.071
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  2512 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-b-12800010.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-b-12800010.fits

 Processing chip c - ap2D-c-12800010.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-c-09710014.fits
Recentering shift = -0.077
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1168 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-c-12800010.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-c-12800010.fits
AP2PROC finished

Step 4 - Compressing files
--------------------------

Compressing the bundled files
% Compiled module: APZIP.
% Compiled module: LOADINPUT.
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800010.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
% Compiled module: MKTEMP.
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28869120 bytes
Compression ratio = 1.81854
dt = 12.077137 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800010.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28402560 bytes
Compression ratio = 1.84841
dt = 11.757203 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800010.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28290240 bytes
Compression ratio = 1.85575
dt = 12.067470 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800010.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800010.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800010.fits
Compressing the 1D spectral files with FPACK
Compressing /data/apogee/quickred/56842/ap1D-a-12800010.fits
Compressing /data/apogee/quickred/56842/ap1D-b-12800010.fits
Compressing /data/apogee/quickred/56842/ap1D-c-12800010.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800010.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800010.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800010.fits.

Step 5 - Database prep and insert
--------------------------

% Compiled module: APQUICKRED_DBPREP.
% Compiled module: ZSCALE.
% Compiled module: GOODPOLY.
% Compiled module: BADPAR.
% Compiled module: POLY_FIT.
% Compiled module: STDEV.
% Compiled module: APQUICKRED_DBINSERT.
starting apquickred_dbinsert ...
% Compiled module: GET_SQL_COL.
% Compiled module: GET_SQL_SETUP.
% Compiled module: IDL_SQL_DEFSYSV.
Inserting Quickred data
% Compiled module: REPSTR.
% Compiled module: EXEC_SQL.
% Compiled module: SET_SQL_COLARRAY.
Inserting Quickred IMBINZOOM
Inserting Quickred SPECTRUM
Inserting exposure header information
apquickred_dbinsert completed
dt = 62.077891 sec.
dt = 165.23153 sec
159 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
160 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
161 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
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188 ql Message = ditherPosition=12.994020,A
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195 ql Message = ditherPosition=12.994020,A
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196 ql Message = ditherPosition=12.994020,A
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197 ql Message = ditherPosition=12.994020,A
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198 ql Message = ditherPosition=12.994020,A
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199 ql Message = ditherPosition=12.994020,A
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200 ql Message = ditherPosition=12.994020,A
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201 ql Message = ditherPosition=12.994020,A
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202 ql Message = ditherPosition=12.994020,A
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203 ql Message = ditherPosition=12.994020,A
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204 ql Message = ditherPosition=12.994020,A
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205 ql Message = ditherPosition=12.994020,A
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206 ql Message = ditherPosition=12.994020,A
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207 ql Message = ditherPosition=12.994020,A
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208 ql Message = ditherPosition=12.994020,A
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209 ql Message = ditherPosition=12.994020,A
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210 ql Message = ditherPosition=12.994020,A
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211 ql Message = ditherPosition=12.994020,A
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212 ql Message = ditherPosition=12.994020,A
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213 ql Message = ditherPosition=12.994020,A
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214 ql Message = ditherPosition=12.994020,A
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215 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
216 ql Message = ditherPosition=12.994020,A
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217 ql Message = ditherPosition=12.994020,A
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218 ql Message = ditherPosition=12.994020,A
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219 ql Message = ditherPosition=12.994020,A
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220 ql Message = ditherPosition=12.994020,A
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221 ql Message = ditherPosition=12.994020,A
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222 ql Message = ditherPosition=12.994020,A
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223 ql Message = ditherPosition=12.994020,A
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224 ql Message = ditherPosition=12.994020,A
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225 ql Message = ditherPosition=12.994020,A
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226 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
227 ql Message = ditherPosition=12.994020,A
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228 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
229 ql Message = ditherPosition=12.994020,A
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230 ql Message = ditherPosition=12.994020,A
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231 ql Message = ditherPosition=12.994020,A
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232 ql Message = ditherPosition=12.994020,A
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233 ql Message = ditherPosition=12.994020,A
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234 ql Message = ditherPosition=12.994020,A
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235 ql Message = ditherPosition=12.994020,A
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236 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
237 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
new rollover = 86399.79 s from now, at time.struct_time(tm_year=2014, tm_mon=7, tm_mday=5, tm_hour=7, tm_min=12, tm_sec=0, tm_wday=5, tm_yday=186, tm_isdst=0)

238 ql Message = ditherPosition=12.994020,A
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239 ql Message = ditherPosition=12.994020,A
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240 ql Message = ditherPosition=12.994020,A
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241 ql Message = ditherPosition=12.994020,A
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242 ql Message = ditherPosition=12.994020,A
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243 ql Message = ditherPosition=12.994020,A
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244 ql Message = ditherPosition=12.994020,A
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245 ql Message = ditherPosition=12.994020,A
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246 ql Message = ditherPosition=12.994020,A
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247 ql Message = ditherPosition=12.994020,A
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248 ql Message = ditherPosition=12.994020,A
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249 ql Message = ditherPosition=12.994020,A
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250 ql Message = ditherPosition=12.994020,A
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251 ql Message = ditherPosition=12.994020,A
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252 ql Message = ditherPosition=12.994020,A
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253 ql Message = ditherPosition=12.994020,A
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254 ql Message = ditherPosition=12.994020,A
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255 ql Message = ditherPosition=12.994020,A
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256 ql Message = ditherPosition=12.994020,A
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257 ql Message = ditherPosition=12.994020,A
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261 ql Message = ditherPosition=12.994020,A
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262 ql Message = ditherPosition=12.994020,A
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263 ql Message = ditherPosition=12.994020,A
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264 ql Message = ditherPosition=12.994020,A
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265 ql Message = ditherPosition=12.994020,A
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266 ql Message = ditherPosition=12.994020,A
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267 ql Message = ditherPosition=12.994020,A
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275 ql Message = ditherPosition=12.994020,A
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276 ql Message = ditherPosition=12.994020,A
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277 ql Message = ditherPosition=12.994020,A
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278 ql Message = ditherPosition=12.994020,A
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279 ql Message = ditherPosition=12.994020,A
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280 ql Message = ditherPosition=12.994020,A
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281 ql Message = ditherPosition=12.994020,A
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282 ql Message = ditherPosition=12.994020,A
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283 ql Message = ditherPosition=12.994020,A
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284 ql Message = ditherPosition=12.994020,A
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285 ql Message = ditherPosition=12.994020,A
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286 ql Message = ditherPosition=12.994020,A
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287 ql Message = ditherPosition=12.994020,A
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288 ql Message = ditherPosition=12.994020,A
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289 ql Message = ditherPosition=12.994020,A
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290 ql Message = ditherPosition=12.994020,A
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291 ql Message = ditherPosition=12.994020,A
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292 ql Message = ditherPosition=12.994020,A
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293 ql Message = ditherPosition=12.994020,A
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294 ql Message = ditherPosition=12.994020,A
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295 ql Message = ditherPosition=12.994020,A
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296 ql Message = ditherPosition=12.994020,A
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297 ql Message = ditherPosition=12.994020,A
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298 ql Message = ditherPosition=12.994020,A
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299 ql Message = ditherPosition=12.994020,A
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300 ql Message = ditherPosition=12.994020,A
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301 ql Message = ditherPosition=12.994020,A
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302 ql Message = ditherPosition=12.994020,A
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303 ql Message = ditherPosition=12.994020,A
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304 ql Message = ditherPosition=12.994020,A
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305 ql Message = ditherPosition=12.994020,A
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306 ql Message = ditherPosition=12.994020,A
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307 ql Message = ditherPosition=12.994020,A
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308 ql Message = ditherPosition=12.994020,A
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309 ql Message = ditherPosition=12.994020,A
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310 ql Message = ditherPosition=12.994020,A
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311 ql Message = ditherPosition=12.994020,A
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312 ql Message = ditherPosition=12.994020,A
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313 ql Message = ditherPosition=12.994020,A
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314 ql Message = ditherPosition=12.994020,A
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315 ql Message = ditherPosition=12.994020,A
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316 ql Message = ditherPosition=12.994020,A
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317 ql Message = ditherPosition=12.994020,A
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318 ql Message = ditherPosition=12.994020,A
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319 ql Message = ditherPosition=12.994020,A
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320 ql Message = ditherPosition=12.994020,A
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321 ql Message = ditherPosition=12.994020,A
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322 ql Message = ditherPosition=12.994020,A
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323 ql Message = ditherPosition=12.994020,A
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324 ql Message = ditherPosition=12.994020,A
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325 ql Message = ditherPosition=12.994020,A
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326 ql Message = ditherPosition=12.994020,A
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327 ql Message = ditherPosition=12.994020,A
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328 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
329 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
330 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
331 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
332 ql Message = ditherPosition=12.994020,A
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333 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
334 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
335 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
336 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
337 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
338 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
339 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
340 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
341 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
342 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
343 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Card is too long, comment will be truncated.
344 ql Message = UTR=/data-ql/data/56842/apRaw-12800011-001.fits,70879,1,3
Card is too long, comment will be truncated.
345 ql Message = UTR=/data-ql/data/56842/apRaw-12800011-002.fits,70879,2,3
Processing /data-ql/data/56842/apRaw-12800011-002.fits
APQL_FITSHEADER ...
dt = 0.16522217 sec
<PtrHeapVar181> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800011-002.fits
Inserting S/N information
Inserting exposure_pk information 70879
Inserting required fits keywords error information
Card is too long, comment will be truncated.
13 qr Message = UTR=DONE,12800011,56842,70879
Number of running qrBridge processes:            2
Number of valid qrBridge objects:            2  res=   1   1
apqractor_lun=         100
APQUICKRED Completed normally
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Fri Jul  4 16:02:59 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800011  Nreads=3
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 3 for 12800011
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800011.fits
APQL_FITSHEADER ...
dt = 0.20452714 sec
<PtrHeapVar184> STRUCT    = -> <Anonymous> Array[1]
347 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800011-003.fits
Inserting S/N information
Inserting exposure_pk information 70879
Inserting required fits keywords error information
dt = 4.9962461 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800011.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800011.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 4.2053099 sec

Processing /data/apogee/archive/56842/apR-b-12800011.fits  Nreads=3
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800011.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 4.5779178 sec

Processing /data/apogee/archive/56842/apR-c-12800011.fits  Nreads=3
348 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=1
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800011.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 5.3502970 sec


Step 3 - Extracting the spectra
-------------------------------
Cannot do extraction for EXPTYPE=DARK

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800011.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Card is too long, comment will be truncated.
Step III: Compressing with fpack
349 ql Message = UTR=/data-ql/data/56842/apRaw-12800012-001.fits,70880,1,5
Input file size = 31504320 bytes
Output file size = 20073600 bytes
Compression ratio = 1.56944
dt = 10.142892 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800011.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Card is too long, comment will be truncated.
Input file size = 31504320 bytes
Output file size = 19474560 bytes
Compression ratio = 1.61772
dt = 7.0427361 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800011.fits<< (31.50 MB)
Nreads = 3
Step I: Making dCounts temporary file
350 ql Message = UTR=/data-ql/data/56842/apRaw-12800012-002.fits,70880,2,5
Processing /data-ql/data/56842/apRaw-12800012-002.fits
Step II: Subtracting average dCounts
APEXTRACT...
Step III: Compressing with fpack
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
300 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300
snr_standard =       0.00000
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 5.0035269 sec
% Program caused arithmetic error: Floating divide by 0
<PtrHeapVar189> LONG      = Array[300]
<PtrHeapVar190> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800012-002.fits
Inserting S/N information
Inserting exposure_pk information 70880
Inserting required fits keywords error information
Input file size = 31504320 bytes
Output file size = 19382400 bytes
Compression ratio = 1.62541
dt = 7.8166070 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800011.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800011.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800011.fits
Card is too long, comment will be truncated.
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800011.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800011.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800011.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
351 ql Message = UTR=/data-ql/data/56842/apRaw-12800012-003.fits,70880,3,5
Processing /data-ql/data/56842/apRaw-12800012-003.fits
Inserting exposure header information
APEXTRACT...
APEXTRACT...
apquickred_dbinsert completed
dt = 7.4454110 sec.
dt = 57.221716 sec
APEXTRACT...
APQL_SNRMAG ...
18 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 259
snr_standard =       70.1029
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 6.8496790 sec
<PtrHeapVar194> LONG      = Array[18]
<PtrHeapVar195> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800012-003.fits
Inserting S/N information
Inserting exposure_pk information 70880
Inserting required fits keywords error information
Card is too long, comment will be truncated.
352 ql Message = UTR=/data-ql/data/56842/apRaw-12800012-004.fits,70880,4,5
Processing /data-ql/data/56842/apRaw-12800012-004.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       70.9118
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.1175840 sec
<PtrHeapVar199> LONG      = Array[1]
<PtrHeapVar200> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800012-004.fits
Inserting S/N information
Inserting exposure_pk information 70880
Inserting required fits keywords error information
Card is too long, comment will be truncated.
14 qr Message = UTR=DONE,12800012,56842,70880
Number of running qrBridge processes:            2
Number of valid qrBridge objects:            2  res=   1   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Fri Jul  4 16:04:11 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800012  Nreads=5
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 5 for 12800012
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800012.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       70.7647
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 4.0873611 sec
<PtrHeapVar204> LONG      = Array[1]
<PtrHeapVar205> STRUCT    = -> <Anonymous> Array[1]
354 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800012-005.fits
Inserting S/N information
Inserting exposure_pk information 70880
Inserting required fits keywords error information
dt = 10.245987 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800012.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800012.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 2.1053979 sec

Processing /data/apogee/archive/56842/apR-b-12800012.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800012.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 1.9383800 sec

Processing /data/apogee/archive/56842/apR-c-12800012.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800012.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 1.9421041 sec


Step 3 - Extracting the spectra
-------------------------------

Extracting file /data/apogee/quickred/56842/12800012
--------------------------------------------------
MJD5 = 56842
 Processing chip a - ap2D-a-12800012.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-a-09710014.fits
Recentering shift = 0.084
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1354 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-a-12800012.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-a-12800012.fits

 Processing chip b - ap2D-b-12800012.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-b-09710014.fits
Recentering shift = 0.060
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  2688 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-b-12800012.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-b-12800012.fits

 Processing chip c - ap2D-c-12800012.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-c-09710014.fits
Recentering shift = 0.051
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1426 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-c-12800012.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-c-12800012.fits
AP2PROC finished

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800012.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28811520 bytes
Compression ratio = 1.82217
dt = 9.3928111 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800012.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28339200 bytes
Compression ratio = 1.85254
dt = 9.3020780 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800012.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28287360 bytes
Compression ratio = 1.85594
dt = 9.4191470 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800012.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800012.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800012.fits
Compressing the 1D spectral files with FPACK
Compressing /data/apogee/quickred/56842/ap1D-a-12800012.fits
Compressing /data/apogee/quickred/56842/ap1D-b-12800012.fits
Compressing /data/apogee/quickred/56842/ap1D-c-12800012.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800012.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800012.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800012.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Inserting Quickred SPECTRUM
355 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Card is too long, comment will be truncated.
356 ql Message = UTR=/data-ql/data/56842/apRaw-12800013-001.fits,70881,1,5
Card is too long, comment will be truncated.
357 ql Message = UTR=/data-ql/data/56842/apRaw-12800013-002.fits,70881,2,5
Processing /data-ql/data/56842/apRaw-12800013-002.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
300 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251, 252, 253, 254, 255, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 297, 298, 299, 300
snr_standard =       0.00000
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.0518920 sec
% Program caused arithmetic error: Floating divide by 0
<PtrHeapVar210> LONG      = Array[300]
<PtrHeapVar211> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800013-002.fits
Inserting S/N information
Inserting exposure_pk information 70881
Inserting required fits keywords error information
Inserting exposure header information
Card is too long, comment will be truncated.
358 ql Message = UTR=/data-ql/data/56842/apRaw-12800013-003.fits,70881,3,5
Processing /data-ql/data/56842/apRaw-12800013-003.fits
APEXTRACT...
APEXTRACT...
apquickred_dbinsert completed
dt = 77.714361 sec.
dt = 149.65657 sec
% Program caused arithmetic error: Floating underflow
APEXTRACT...
APQL_SNRMAG ...
20 missing fibers: 
1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 259
snr_standard =       68.8333
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.3692420 sec
<PtrHeapVar215> LONG      = Array[20]
<PtrHeapVar216> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800013-003.fits
Inserting S/N information
Inserting exposure_pk information 70881
Inserting required fits keywords error information
Card is too long, comment will be truncated.
359 ql Message = UTR=/data-ql/data/56842/apRaw-12800013-004.fits,70881,4,5
Processing /data-ql/data/56842/apRaw-12800013-004.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       69.8358
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 3.0178871 sec
<PtrHeapVar220> LONG      = Array[1]
<PtrHeapVar221> STRUCT    = -> <Anonymous> Array[1]
Inserting basic information for  -> apRaw-12800013-004.fits
Inserting S/N information
Inserting exposure_pk information 70881
Inserting required fits keywords error information
Card is too long, comment will be truncated.
15 qr Message = UTR=DONE,12800013,56842,70881
Number of running qrBridge processes:            2
Number of valid qrBridge objects:            2  res=   1   1
apqractor_lun=         100
APQUICKRED Completed normally
in APQUICKRED

===============================
Running APOGEE QUICK REDUCTION
===============================
Fri Jul  4 16:06:59 2014
Using BPM = /data-ql/spectro/v0.6//cal/bpm/55577-00000037
Using PSF = /data-ql/spectro/v0.6//cal/psf/09710014

-----------------------------------------------------------
Processing Frame = 12800013  Nreads=5
-----------------------------------------------------------

Step 1 - Bundling
-----------------

Nfiles = 5 for 12800013
Writing bundled file to /data/apogee/archive/56842/apR-[abc]-12800013.fits
APEXTRACT...
APEXTRACT...
APEXTRACT...
APQL_SNRMAG ...
1 missing fibers: 259
snr_standard =       69.8209
logsnr_hmag_coef =       0.00000      0.00000
APQL_FITSHEADER ...
dt = 2.7215068 sec
<PtrHeapVar225> LONG      = Array[1]
<PtrHeapVar226> STRUCT    = -> <Anonymous> Array[1]
361 ql Message = UTR=DONE
Inserting basic information for  -> apRaw-12800013-005.fits
Inserting S/N information
Inserting exposure_pk information 70881
Inserting required fits keywords error information
dt = 9.7851858 sec

Step 2 - Collapsing the datacube
--------------------------------

Processing /data/apogee/archive/56842/apR-a-12800013.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-a-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-a-12800013.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.6816821 sec

Processing /data/apogee/archive/56842/apR-b-12800013.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-b-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-b-12800013.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.8893220 sec

Processing /data/apogee/archive/56842/apR-c-12800013.fits  Nreads=5
Using BPM file = /data-ql/spectro/v0.6//cal/bpm/apBPM-c-55577-00000037.fits
Using FOWLER sampling. NFOWLER=2
Writing output to: /data/apogee/quickred/56842/ap2D-c-12800013.fits
Saving FLUX/ERR as LONG instead of FLOAT
dt = 3.5642190 sec


Step 3 - Extracting the spectra
-------------------------------

Extracting file /data/apogee/quickred/56842/12800013
--------------------------------------------------
MJD5 = 56842
 Processing chip a - ap2D-a-12800013.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-a-09710014.fits
Recentering shift = 0.080
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1253 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-a-12800013.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-a-12800013.fits

 Processing chip b - ap2D-b-12800013.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-b-09710014.fits
Recentering shift = 0.054
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  2428 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-b-12800013.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-b-12800013.fits

 Processing chip c - ap2D-c-12800013.fits
  PSF file = /data-ql/spectro/v0.6//cal/psf/apPSF-c-09710014.fits
Recentering shift = 0.041
Using Gaussian PSF fitting Extraction
 ROW NITER SIG(med) CHI^2
  AP_EXTRACT_IMAGE: masked  1265 pixels
Writing output to: /data/apogee/quickred/56842/ap1D-c-12800013.fits
Saving FLUX/ERR as LONG instead of FLOAT
Writing 2D model to: /data/apogee/quickred/56842/ap2Dmodel-c-12800013.fits
AP2PROC finished

Step 4 - Compressing files
--------------------------

Compressing the bundled files
3 Files input
1/3

Compressing >>/data/apogee/archive/56842/apR-a-12800013.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28863360 bytes
Compression ratio = 1.81890
dt = 9.1938052 sec

2/3

Compressing >>/data/apogee/archive/56842/apR-b-12800013.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
362 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28399680 bytes
Compression ratio = 1.84860
dt = 9.3072870 sec

3/3

Compressing >>/data/apogee/archive/56842/apR-c-12800013.fits<< (52.50 MB)
Nreads = 5
Step I: Making dCounts temporary file
Step II: Subtracting average dCounts
Step III: Compressing with fpack
Input file size = 52499520 bytes
Output file size = 28272960 bytes
Compression ratio = 1.85688
dt = 9.2957001 sec

Compressing the 2D images with FPACK
Compressing /data/apogee/quickred/56842/ap2D-a-12800013.fits
Compressing /data/apogee/quickred/56842/ap2D-b-12800013.fits
Compressing /data/apogee/quickred/56842/ap2D-c-12800013.fits
Compressing the 1D spectral files with FPACK
Compressing /data/apogee/quickred/56842/ap1D-a-12800013.fits
Compressing /data/apogee/quickred/56842/ap1D-b-12800013.fits
Compressing /data/apogee/quickred/56842/ap1D-c-12800013.fits
Deleting Bundled files
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-a-12800013.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-b-12800013.fits.
% FILE_DELETE: Removed file: /data/apogee/archive/56842/apR-c-12800013.fits.

Step 5 - Database prep and insert
--------------------------

starting apquickred_dbinsert ...
Inserting Quickred data
Inserting Quickred IMBINZOOM
Inserting Quickred SPECTRUM
Inserting exposure header information
apquickred_dbinsert completed
dt = 73.952764 sec.
dt = 154.75728 sec
% Program caused arithmetic error: Floating underflow
363 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
364 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
365 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
366 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
367 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
368 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
369 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
370 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
371 ql Message = ditherPosition=12.994020,A
0 - namedDitherPos=A
Error reading apqlactor_lun -> testing the socket connection
372 ql Message = 
% PRINTF: Error encountered writing to file. Unit: 100
          File: localhost.10038
  Broken pipe
% PRINTF: Error encountered writing to file. Unit: 100
          File: localhost.10038
  Broken pipe
Error reading apqlactor_lun -> testing the socket connection
% PRINTF: Error encountered writing to file. Unit: 100
          File: localhost.10038
  Broken pipe
socket is close -> EXITING apql_wrapper

% Error encountered writing to file. Unit: 100
  File: localhost.10038
  Broken pipe
apqr_wrapper -> Connection from  127.0.0.1 46995
Connection from  127.0.0.1 52391