Started working on galaxy PGC1741603 at Thu Jun  4 08:11:07 2020
Bands touching this brick, g r z
python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 212.83397399999998 25.5770161 --width 347 --height 347 --pixscale 0.262 --threads 8 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0 

runbrick.py starting at 2020-06-04T08:11:08.230888
legacypipe git version: DR9.5.2
Command-line args: ['/global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py', '--radec', '212.83397399999998', '25.5770161', '--width', '347', '--height', '347', '--pixscale', '0.262', '--threads', '8', '--outdir', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603', '--survey-dir', '/global/cfs/cdirs/cosmo/work/legacysurvey/dr9', '--run', 'south', '--write-stage', 'tims', '--write-stage', 'srcs', '--skip-calibs', '--checkpoint', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-checkpoint.p', '--pickle', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-%%(stage)s.p', '--fit-on-coadds', '--saddle-fraction', '0.2', '--saddle-min', '4.0']
python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 212.83397399999998 25.5770161 --width 347 --height 347 --pixscale 0.262 --threads 8 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0

Parsed RA,Dec 212.83397399999998 25.5770161
Starting process 61800 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057308 MB
Starting process 61801 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057308 MB
Starting process 61802 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057308 MB
Starting process 61803 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057312 MB
Starting process 61804 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057316 MB
Starting process 61805 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.05732 MB
Starting process 61806 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057324 MB
Starting process 61807 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057324 MB
Runstage writecat
Runstage wise_forced
Runstage coadds
Runstage fitblobs
Runstage srcs
Runstage fit_on_coadds
Runstage halos
Runstage outliers
Runstage refs
Runstage tims
Running stage tims
Running stage tims at 2020-06-04T08:11:10.490118
Keeping 15 CCDs:
   c4d_160301_081511_ooi_z_ls9.fits.fz c4d_160301_081511_ooi_z_ls9-S21 z exptime 80.0 propid 2014B-0404 seeing 1.24 MJD 57448.342 object DECaLS_22649_z
   c4d_170520_033619_ooi_g_ls9.fits.fz c4d_170520_033619_ooi_g_ls9-S21 g exptime 175.0 propid 2014B-0404 seeing 1.99 MJD 57893.148 object DECaLS_22649_g
   c4d_170521_031938_ooi_r_ls9.fits.fz c4d_170521_031938_ooi_r_ls9-S21 r exptime 120.0 propid 2014B-0404 seeing 1.46 MJD 57894.137 object DECaLS_22649_r
   c4d_180518_023529_ooi_g_ls9.fits.fz c4d_180518_023529_ooi_g_ls9-S21 g exptime 183.0 propid 2014B-0404 seeing 1.65 MJD 58256.108 object DECaLS_22649_g
   c4d_170305_093847_ooi_z_ls9.fits.fz c4d_170305_093847_ooi_z_ls9-N31 z exptime 80.0 propid 2014B-0404 seeing 1.16 MJD 57817.400 object DECaLS_38522_z
   c4d_180225_080130_ooi_r_ls9.fits.fz c4d_180225_080130_ooi_r_ls9-N31 r exptime 68.0 propid 2014B-0404 seeing 1.08 MJD 58174.334 object DECaLS_38522_r
   c4d_180225_080307_ooi_g_ls9.fits.fz c4d_180225_080307_ooi_g_ls9-N31 g exptime 109.0 propid 2014B-0404 seeing 1.22 MJD 58174.335 object DECaLS_38522_g
   c4d_180209_084433_ooi_z_ls9.fits.fz c4d_180209_084433_ooi_z_ls9-N31 z exptime 80.0 propid 2014B-0404 seeing 0.94 MJD 58158.364 object DECaLS_38522_z
   c4d_170328_065705_ooi_r_ls9.fits.fz c4d_170328_065705_ooi_r_ls9-S22 r exptime 40.0 propid 2014B-0404 seeing 1.18 MJD 57840.289 object DECaLS_6777_r
   c4d_150410_051738_ooi_z_ls9.fits.fz c4d_150410_051738_ooi_z_ls9-S22 z exptime 101.0 propid 2014B-0404 seeing 1.13 MJD 57122.219 object DECaLS_6777_z
   c4d_170329_065148_ooi_g_ls9.fits.fz c4d_170329_065148_ooi_g_ls9-S22 g exptime 132.0 propid 2014B-0404 seeing 1.22 MJD 57841.284 object DECaLS_6777_g
   c4d_170304_093755_ooi_z_ls9.fits.fz c4d_170304_093755_ooi_z_ls9-S25 z exptime 80.0 propid 2014B-0404 seeing 1.28 MJD 57816.400 object DECaLS_38521_z
   c4d_180317_074453_ooi_r_ls9.fits.fz c4d_180317_074453_ooi_r_ls9-S25 r exptime 56.0 propid 2014B-0404 seeing 1.15 MJD 58194.323 object DECaLS_38521_r
   c4d_190303_072015_ooi_z_ls9.fits.fz c4d_190303_072015_ooi_z_ls9-S25 z exptime 115.0 propid 2014B-0404 seeing 1.21 MJD 58545.306 object DECaLS_38521_z
   c4d_180315_081334_ooi_g_ls9.fits.fz c4d_180315_081334_ooi_g_ls9-S25 g exptime 145.0 propid 2014B-0404 seeing 1.39 MJD 58192.343 object DECaLS_38521_g
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9530e3b-g-20180518T023529_oi[S21,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_95193ab-g-20170520T033232_oi[S21,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_95197f6-r-20170521T031645_oi[S21,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_952ccca-g-20180225T080307_oi[N31,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_952c998-r-20180225T080130_oi[N31,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_950dd28-z-20170305T093637_oi[N31,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9527115-z-20180209T084433_oi[N31,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_954e8b8-z-20160301T081302_oi[S21,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_956e9f3-z-20150410T051505_oi[S22,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9514cf9-g-20170329T064846_oi[S22,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9512bde-r-20170328T065535_oi[S22,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_950ccb8-z-20170304T093542_oi[S25,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_952df04-r-20180317T074453_oi[S25,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9534c2e-z-20190303T072015_oi[S25,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_952d735-g-20180315T081334_oi[S25,noinherit][2046,4094][real]: DECaLS_
Stage tims : Wall: 39.11 s, CPU: 2.05 s, VmPeak: 996 MB, VmSize: 996 MB, VmRSS: 186 MB, VmData: 220 MB, maxrss: 0.448356 MB
Stage tims finished: 2020-06-04T08:11:49.605055
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_954e8b8-z-20160301T081302_oi[S21,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_952ccca-g-20180225T080307_oi[N31,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9514cf9-g-20170329T064846_oi[S22,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9530e3b-g-20180518T023529_oi[S21,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9512bde-r-20170328T065535_oi[S22,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_95197f6-r-20170521T031645_oi[S21,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_950ccb8-z-20170304T093542_oi[S25,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_95193ab-g-20170520T033232_oi[S21,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_956e9f3-z-20150410T051505_oi[S22,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_952c998-r-20180225T080130_oi[N31,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_952df04-r-20180317T074453_oi[S25,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_950dd28-z-20170305T093637_oi[N31,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9534c2e-z-20190303T072015_oi[S25,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
Resources for stage tims : 7.456 s worker CPU, 257.090 s worker Wall, Wall: 39.116 s, Cores in use: 0.24, Total efficiency (on 8 cores): 3.0 %
Stage tims finished
Saving pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-tims.p
Saved /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-tims.p
Running stage refs
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9527115-z-20180209T084433_oi[N31,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_952d735-g-20180315T081334_oi[S25,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
Running stage refs at 2020-06-04T08:11:50.630099
Reading /global/cfs/cdirs/cosmo/work/gaia/chunks-gaia-dr2-astrom-2/chunk-03467.fits
Reading /global/cfs/cdirs/cosmo/work/gaia/chunks-gaia-dr2-astrom-2/chunk-03595.fits
Reading /global/cfs/cdirs/cosmo/work/gaia/chunks-gaia-dr2-astrom-2/chunk-03468.fits
Reading /global/cfs/cdirs/cosmo/work/gaia/chunks-gaia-dr2-astrom-2/chunk-03339.fits
Matched 19 large galaxies to Gaia stars.
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/metrics/cus/reference-custom-212833p25577.fits
Stage refs : Wall: 7.45 s, CPU: 5.06 s, VmPeak: 1027 MB, VmSize: 1009 MB, VmRSS: 200 MB, VmData: 233 MB, maxrss: 0.448356 MB
Stage refs finished: 2020-06-04T08:11:58.078832
Resources for stage refs : 0.000 s worker CPU, 0.000 s worker Wall, Wall: 7.450 s, Cores in use: 0.68, Total efficiency (on 8 cores): 8.5 %
Stage refs finished
Running stage outliers
Running stage outliers at 2020-06-04T08:11:58.080471
Failed to apply outlier mask: No such file: /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/metrics/cus/outlier-mask-custom-212833p25577.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/metrics/cus/outliers-pre-custom-212833p25577.jpg
Image c4d_180518_023529_ooi_g_ls9-S21 g : masking 652 positive outlier pixels and 0 negative outlier pixels
Image c4d_170329_065148_ooi_g_ls9-S22 g : masking 588 positive outlier pixels and 0 negative outlier pixels
Image c4d_180225_080307_ooi_g_ls9-N31 g : masking 92 positive outlier pixels and 0 negative outlier pixels
Image c4d_180315_081334_ooi_g_ls9-S25 g : masking 597 positive outlier pixels and 319 negative outlier pixels
Image c4d_170520_033619_ooi_g_ls9-S21 g : masking 107 positive outlier pixels and 0 negative outlier pixels
Image c4d_170521_031938_ooi_r_ls9-S21 r : masking 1361 positive outlier pixels and 0 negative outlier pixels
Image c4d_180225_080130_ooi_r_ls9-N31 r : masking 514 positive outlier pixels and 0 negative outlier pixels
Image c4d_180317_074453_ooi_r_ls9-S25 r : masking 435 positive outlier pixels and 243 negative outlier pixels
Image c4d_170328_065705_ooi_r_ls9-S22 r : masking 64 positive outlier pixels and 0 negative outlier pixels
Image c4d_170304_093755_ooi_z_ls9-S25 z : masking 203 positive outlier pixels and 6228 negative outlier pixels
Image c4d_180209_084433_ooi_z_ls9-N31 z : masking 237 positive outlier pixels and 0 negative outlier pixels
Image c4d_190303_072015_ooi_z_ls9-S25 z : masking 60 positive outlier pixels and 126 negative outlier pixels
Image c4d_170305_093847_ooi_z_ls9-N31 z : masking 114 positive outlier pixels and 0 negative outlier pixels
Image c4d_160301_081511_ooi_z_ls9-S21 z : masking 256 positive outlier pixels and 0 negative outlier pixels
Image c4d_150410_051738_ooi_z_ls9-S22 z : masking 167 positive outlier pixels and 0 negative outlier pixels
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/metrics/cus/outlier-mask-custom-212833p25577.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/metrics/cus/outliers-post-custom-212833p25577.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/metrics/cus/outliers-masked-pos-custom-212833p25577.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/metrics/cus/outliers-masked-neg-custom-212833p25577.jpg
Stage outliers : Wall: 4.40 s, CPU: 3.95 s, VmPeak: 1027 MB, VmSize: 1019 MB, VmRSS: 229 MB, VmData: 258 MB, maxrss: 0.448356 MB
Stage outliers finished: 2020-06-04T08:12:02.480647
Resources for stage outliers : 2.746 s worker CPU, 2.761 s worker Wall, Wall: 4.401 s, Cores in use: 1.52, Total efficiency (on 8 cores): 19.0 %
Stage outliers finished
Running stage halos
Running stage halos at 2020-06-04T08:12:02.482766
Stage halos : Wall: 9.50 s, CPU: 3.93 s, VmPeak: 1027 MB, VmSize: 1019 MB, VmRSS: 229 MB, VmData: 258 MB, maxrss: 0.448356 MB
Stage halos finished: 2020-06-04T08:12:11.980898
Resources for stage halos : 0.400 s worker CPU, 13.976 s worker Wall, Wall: 9.499 s, Cores in use: 0.46, Total efficiency (on 8 cores): 5.7 %
Stage halos finished
Running stage fit_on_coadds
Running stage fit_on_coadds at 2020-06-04T08:12:11.982994
PSF sigmas in coadd pixels: ['3.24', '2.68', '1.98', '1.98', '2.25']
Using average PSF sigma 2.4255952389796986
Gaussian PSF norm 0.11629920245578088 vs pixelized 0.10295709
average tim pixel scale / coadd scale: 1.0012750996397595
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-copsf-g.fits.fz
PSF sigmas in coadd pixels: ['2.37', '1.76', '1.91', '1.87']
Using average PSF sigma 1.9780942573032252
Gaussian PSF norm 0.1426093780578806 vs pixelized 0.12268571
average tim pixel scale / coadd scale: 1.0012985637699403
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-copsf-r.fits.fz
PSF sigmas in coadd pixels: ['2.01', '1.89', '1.52', '1.83', '2.08', '1.96']
Using average PSF sigma 1.8825477477594557
Gaussian PSF norm 0.1498473502781631 vs pixelized 0.12569283
average tim pixel scale / coadd scale: 1.0012946147578305
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-copsf-z.fits.fz
Stage fit_on_coadds : Wall: 1.50 s, CPU: 0.34 s, VmPeak: 1027 MB, VmSize: 1019 MB, VmRSS: 231 MB, VmData: 259 MB, maxrss: 0.448356 MB
Stage fit_on_coadds finished: 2020-06-04T08:12:13.480880
Resources for stage fit_on_coadds : 0.537 s worker CPU, 0.544 s worker Wall, Wall: 1.499 s, Cores in use: 0.59, Total efficiency (on 8 cores): 7.3 %
Stage fit_on_coadds finished
Running stage srcs
Running stage srcs at 2020-06-04T08:12:13.484552
SED-matched filters: [('z', array([0., 0., 1.])), ('r', array([0., 1., 0.])), ('g', array([1., 0., 0.])), ('Flat', [1.0, 1.0, 1.0]), ('Red', [2.5, 1.0, 0.4])]
Found 225 potential peaks
Of 225 potential peaks: 181 in veto map, 11 cut by saddle test, 0 cut by aper test, 33 kept
SED z : 33 new peaks
Found 198 potential peaks
Of 198 potential peaks: 188 in veto map, 10 cut by saddle test, 0 cut by aper test, 0 kept
SED r : 0 new peaks
Found 166 potential peaks
Of 166 potential peaks: 147 in veto map, 12 cut by saddle test, 0 cut by aper test, 7 kept
SED g : 7 new peaks
Found 215 potential peaks
Of 215 potential peaks: 198 in veto map, 15 cut by saddle test, 0 cut by aper test, 2 kept
SED Flat : 2 new peaks
Found 273 potential peaks
Of 273 potential peaks: 258 in veto map, 14 cut by saddle test, 0 cut by aper test, 1 kept
SED Red : 1 new peaks
Adding 43 new sources
Median coadd sky for g : 0.00020223414
Median coadd sky for r : 0.00037324807
Median coadd sky for z : 0.00084730313
Stage srcs : Wall: 5.58 s, CPU: 5.51 s, VmPeak: 1027 MB, VmSize: 1019 MB, VmRSS: 232 MB, VmData: 259 MB, maxrss: 0.448356 MB
Stage srcs finished: 2020-06-04T08:12:19.065419
Resources for stage srcs : 0.163 s worker CPU, 0.163 s worker Wall, Wall: 5.582 s, Cores in use: 1.02, Total efficiency (on 8 cores): 12.7 %
Stage srcs finished
Saving pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-srcs.p
Saved /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/PGC1741603-largegalaxy-srcs.p
Running stage fitblobs
Running stage fitblobs at 2020-06-04T08:12:19.086960
Blob 1 of 12, id: 1, sources: 32, size: 292x347, npix 69038, brick X: 55,347, Y: 0,347, one pixel: 117 0
Blob 2 of 12, id: 7, sources: 2, size: 29x66, npix 1377, brick X: 0,29, Y: 171,237, one pixel: 6 171
Blob 3 of 12, id: 11, sources: 1, size: 44x41, npix 1233, brick X: 287,331, Y: 304,345, one pixel: 307 304
Blob 4 of 12, id: 5, sources: 2, size: 43x55, npix 1169, brick X: 21,64, Y: 93,148, one pixel: 47 93
Blob 5 of 12, id: 9, sources: 2, size: 37x55, npix 1043, brick X: 51,88, Y: 240,295, one pixel: 62 240
Blob 6 of 12, id: 8, sources: 1, size: 30x33, npix 654, brick X: 312,342, Y: 221,254, one pixel: 327 221
Blob 7 of 12, id: 4, sources: 2, size: 45x22, npix 616, brick X: 4,49, Y: 40,62, one pixel: 13 40
Blob 8 of 12, id: 3, sources: 1, size: 21x32, npix 480, brick X: 326,347, Y: 18,50, one pixel: 339 18
Blob 9 of 12, id: 0, sources: 1, size: 31x20, npix 416, brick X: 29,60, Y: 0,20, one pixel: 37 0
Measuring 1 iterative sources
Measuring 1 iterative sources
Blob 8 finished, total: Wall: 0.99 s, CPU: 0.99 s, VmPeak: 962 MB, VmSize: 721 MB, VmRSS: 145 MB, VmData: 184 MB, maxrss: 0.148552 MB
Blob 10 of 12, id: 2, sources: 1, size: 25x24, npix 386, brick X: 289,314, Y: 1,25, one pixel: 300 1
Blob 7 finished, total: Wall: 1.14 s, CPU: 1.14 s, VmPeak: 958 MB, VmSize: 721 MB, VmRSS: 145 MB, VmData: 184 MB, maxrss: 0.14842 MB
Blob 11 of 12, id: 6, sources: 1, size: 17x25, npix 305, brick X: 0,17, Y: 105,130, one pixel: 5 105
Measuring 1 iterative sources
Blob 6 finished, total: Wall: 1.35 s, CPU: 1.35 s, VmPeak: 957 MB, VmSize: 721 MB, VmRSS: 145 MB, VmData: 184 MB, maxrss: 0.148304 MB
Blob 12 of 12, id: 10, sources: 1, size: 18x18, npix 171, brick X: 12,30, Y: 263,281, one pixel: 21 263
Blob 10 finished, total: Wall: 0.27 s, CPU: 0.27 s, VmPeak: 958 MB, VmSize: 721 MB, VmRSS: 147 MB, VmData: 184 MB, maxrss: 0.150048 MB
Blob 12 finished, total: Wall: 0.05 s, CPU: 0.05 s, VmPeak: 958 MB, VmSize: 721 MB, VmRSS: 147 MB, VmData: 184 MB, maxrss: 0.150048 MB
Blob 9 finished, total: Wall: 0.55 s, CPU: 0.55 s, VmPeak: 962 MB, VmSize: 721 MB, VmRSS: 145 MB, VmData: 184 MB, maxrss: 0.148552 MB
Blob 4 finished, total: Wall: 1.61 s, CPU: 1.61 s, VmPeak: 958 MB, VmSize: 721 MB, VmRSS: 145 MB, VmData: 184 MB, maxrss: 0.148348 MB
Blob 5 finished, total: Wall: 1.83 s, CPU: 1.83 s, VmPeak: 961 MB, VmSize: 721 MB, VmRSS: 147 MB, VmData: 184 MB, maxrss: 0.15006 MB
Blob 11 finished, total: Wall: 0.75 s, CPU: 0.75 s, VmPeak: 957 MB, VmSize: 721 MB, VmRSS: 145 MB, VmData: 184 MB, maxrss: 0.148304 MB
Blob 3 finished, total: Wall: 2.20 s, CPU: 2.20 s, VmPeak: 940 MB, VmSize: 721 MB, VmRSS: 147 MB, VmData: 184 MB, maxrss: 0.15014 MB
Measuring 1 iterative sources
Blob 2 finished, total: Wall: 3.17 s, CPU: 3.17 s, VmPeak: 958 MB, VmSize: 721 MB, VmRSS: 148 MB, VmData: 184 MB, maxrss: 0.151252 MB
Known galaxy.  Initial shape: EllipseWithPriors(0.25): log r_e=0.888228, ee1=0.107164, ee2=-0.0490124
Measuring 48 iterative sources
Blob 1 finished, total: Wall: 62.31 s, CPU: 62.30 s, VmPeak: 957 MB, VmSize: 771 MB, VmRSS: 205 MB, VmData: 234 MB, maxrss: 0.210324 MB
Old catalog: 52
New catalog: 88
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/metrics/cus/blobs-custom-212833p25577.fits.gz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/metrics/cus/all-models-custom-212833p25577.fits
Stage fitblobs : Wall: 65.87 s, CPU: 3.49 s, VmPeak: 1027 MB, VmSize: 1019 MB, VmRSS: 234 MB, VmData: 262 MB, maxrss: 0.448356 MB
Stage fitblobs finished: 2020-06-04T08:13:24.953126
Resources for stage fitblobs : 76.411 s worker CPU, 76.475 s worker Wall, Wall: 65.869 s, Cores in use: 1.21, Total efficiency (on 8 cores): 15.2 %
Stage fitblobs finished
Running stage coadds
Running stage coadds at 2020-06-04T08:13:24.957069
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-ccds.fits
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-image-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-invvar-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-nexp-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-depth-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-galdepth-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-psfsize-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-model-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-chi2-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-blobmodel-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-image-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-invvar-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-nexp-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-depth-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-galdepth-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-psfsize-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-model-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-chi2-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-blobmodel-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-image-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-invvar-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-nexp-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-depth-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-galdepth-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-psfsize-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-model-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-chi2-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-blobmodel-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-depth.fits
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/tmp-legacysurvey-custom-212833p25577-image.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-image.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/tmp-legacysurvey-custom-212833p25577-model.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-model.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/tmp-legacysurvey-custom-212833p25577-blobmodel.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-blobmodel.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/tmp-legacysurvey-custom-212833p25577-resid.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-resid.jpg
Stage coadds : Wall: 4.63 s, CPU: 3.63 s, VmPeak: 1027 MB, VmSize: 1019 MB, VmRSS: 235 MB, VmData: 262 MB, maxrss: 0.448356 MB
Stage coadds finished: 2020-06-04T08:13:29.582139
Resources for stage coadds : 5.208 s worker CPU, 5.552 s worker Wall, Wall: 4.626 s, Cores in use: 1.91, Total efficiency (on 8 cores): 23.9 %
Stage coadds finished
Running stage wise_forced
Running stage wise_forced at 2020-06-04T08:13:29.583845
Cut to 1 unWISE tiles
Reading WISE tile 2133p257 band 2
Reading WISE tile 2133p257 band 1
Reading WISE tile 2133p257 band 3
Reading WISE tile 2133p257 band 4
Does not exist: /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w4-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w4-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w4-invvar-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w4-n-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w4-n-u.fits.gz
Reading /usr/local/lib/python/wise/wise-psf-avg.fits
unWISE forced photometry took Wall: 0.31 s, CPU: 0.99 s, VmPeak: 1087 MB, VmSize: 1023 MB, VmRSS: 179 MB, VmData: 211 MB, maxrss: 0.22448 MB
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w1-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w1-invvar-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w1-n-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w1-n-u.fits.gz
Reading /usr/local/lib/python/wise/wise-psf-avg.fits
unWISE forced photometry took Wall: 0.17 s, CPU: 0.44 s, VmPeak: 1002 MB, VmSize: 1002 MB, VmRSS: 150 MB, VmData: 189 MB, maxrss: 0.211748 MB
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w2-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w2-invvar-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w2-n-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w2-n-u.fits.gz
Reading /usr/local/lib/python/wise/wise-psf-avg.fits
unWISE forced photometry took Wall: 0.20 s, CPU: 0.48 s, VmPeak: 998 MB, VmSize: 998 MB, VmRSS: 150 MB, VmData: 185 MB, maxrss: 0.212036 MB
Does not exist: /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w3-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w3-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w3-invvar-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w3-n-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/213/2133p257/unwise-2133p257-w3-n-u.fits.gz
Reading /usr/local/lib/python/wise/wise-psf-avg.fits
unWISE forced photometry took Wall: 0.14 s, CPU: 0.32 s, VmPeak: 1002 MB, VmSize: 1002 MB, VmRSS: 149 MB, VmData: 189 MB, maxrss: 0.210644 MB
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-image-W1.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-model-W1.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-invvar-W1.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-image-W2.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-model-W2.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-invvar-W2.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-image-W3.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-model-W3.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-invvar-W3.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-image-W4.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-model-W4.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-invvar-W4.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/tmp-legacysurvey-custom-212833p25577-wise.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-wise.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/tmp-legacysurvey-custom-212833p25577-wisemodel.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-wisemodel.jpg
Setting WISE apphot
Setting WISE apphot
Setting WISE apphot
Setting WISE apphot
Stage wise_forced : Wall: 8.00 s, CPU: 2.77 s, VmPeak: 1027 MB, VmSize: 1019 MB, VmRSS: 236 MB, VmData: 262 MB, maxrss: 0.448356 MB
Stage wise_forced finished: 2020-06-04T08:13:37.585362
Resources for stage wise_forced : 5.354 s worker CPU, 6.511 s worker Wall, Wall: 8.003 s, Cores in use: 1.02, Total efficiency (on 8 cores): 12.7 %
Stage wise_forced finished
Running stage writecat
Running stage writecat at 2020-06-04T08:13:37.587748
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/coadd/cus/custom-212833p25577/legacysurvey-custom-212833p25577-maskbits.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/tractor-i/cus/tractor-custom-212833p25577.fits
Reading SFD maps...
END                                                                             
  Rejected (1), keyrecords following the END keyrecord were ignored.
END                                                                             
  Rejected (1), keyrecords following the END keyrecord were ignored.
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/tractor/cus/tractor-custom-212833p25577.fits
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/212/PGC1741603/tractor/cus/brick-custom-212833p25577.sha256sum
Stage writecat : Wall: 4.82 s, CPU: 4.51 s, VmPeak: 1151 MB, VmSize: 1023 MB, VmRSS: 238 MB, VmData: 262 MB, maxrss: 0.448356 MB
Stage writecat finished: 2020-06-04T08:13:42.407326
Resources for stage writecat : 0.000 s worker CPU, 0.000 s worker Wall, Wall: 4.821 s, Cores in use: 0.94, Total efficiency (on 8 cores): 11.7 %
Stage writecat finished
All done: 98.276 s worker CPU, 363.075 s worker Wall, Wall: 151.922 s, Cores in use: 0.88, Total efficiency (on 8 cores): 11.0 %
Finished galaxy PGC1741603 in 2.592 minutes.