Started working on galaxy PGC058204 at Fri Jun 5 06:47:14 2020 Bands touching this brick, g r z python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 246.94268999999997 20.0539938 --width 259 --height 259 --pixscale 0.262 --threads 4 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0 runbrick.py starting at 2020-06-05T06:47:15.204985 legacypipe git version: DR9.5.2 Command-line args: ['/global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py', '--radec', '246.94268999999997', '20.0539938', '--width', '259', '--height', '259', '--pixscale', '0.262', '--threads', '4', '--outdir', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204', '--survey-dir', '/global/cfs/cdirs/cosmo/work/legacysurvey/dr9', '--run', 'south', '--write-stage', 'tims', '--write-stage', 'srcs', '--skip-calibs', '--checkpoint', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-checkpoint.p', '--pickle', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-%%(stage)s.p', '--fit-on-coadds', '--saddle-fraction', '0.2', '--saddle-min', '4.0'] python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 246.94268999999997 20.0539938 --width 259 --height 259 --pixscale 0.262 --threads 4 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0 Parsed RA,Dec 246.94268999999997 20.0539938 Starting process 13758 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057308 MB Starting process 13759 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057372 MB Starting process 13760 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.0574 MB Starting process 13761 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057312 MB Runstage writecat Runstage wise_forced Runstage coadds Runstage fitblobs Runstage srcs Runstage fit_on_coadds Runstage halos Runstage outliers Runstage refs Runstage tims Running stage tims Running stage tims at 2020-06-05T06:47:17.788948 Keeping 10 CCDs: c4d_180908_001035_ooi_g_ls9.fits.fz c4d_180908_001035_ooi_g_ls9-N2 g exptime 134.0 propid 2014B-0404 seeing 1.48 MJD 58369.007 object DECaLS_31133_g c4d_160803_001408_ooi_r_ls9.fits.fz c4d_160803_001408_ooi_r_ls9-N3 r exptime 48.0 propid 2014B-0404 seeing 1.10 MJD 57603.009 object DECaLS_15261_r c4d_140819_005302_ooi_g_ls9.fits.fz c4d_140819_005302_ooi_g_ls9-N3 g exptime 89.0 propid 2014B-0404 seeing 1.11 MJD 56888.035 object DECaLS_15261_g c4d_140817_233936_ooi_z_ls9.fits.fz c4d_140817_233936_ooi_z_ls9-N3 z exptime 122.0 propid 2014B-0404 seeing 1.07 MJD 56886.984 object DECaLS_15261_z c4d_140817_233936_ooi_z_ls9.fits.fz c4d_140817_233936_ooi_z_ls9-N10 z exptime 122.0 propid 2014B-0404 seeing 1.08 MJD 56886.984 object DECaLS_15261_z c4d_170521_073919_ooi_z_ls9.fits.fz c4d_170521_073919_ooi_z_ls9-N1 z exptime 180.0 propid 2014B-0404 seeing 1.34 MJD 57894.316 object DECaLS_47005_z c4d_140815_020149_ooi_r_ls9.fits.fz c4d_140815_020149_ooi_r_ls9-N1 r exptime 85.0 propid 2014B-0404 seeing 1.55 MJD 56884.083 object DECaLS_47005_r c4d_170721_013933_ooi_g_ls9.fits.fz c4d_170721_013933_ooi_g_ls9-N1 g exptime 200.0 propid 2014B-0404 seeing 1.40 MJD 57955.066 object DECaLS_47005_g c4d_150411_082514_ooi_z_ls9.fits.fz c4d_150411_082514_ooi_z_ls9-N2 z exptime 170.0 propid 2014B-0404 seeing 0.97 MJD 57123.348 object DECaLS_31133_z c4d_180808_235520_ooi_r_ls9.fits.fz c4d_180808_235520_ooi_r_ls9-N2 r exptime 84.0 propid 2014B-0404 seeing 1.18 MJD 58338.997 object DECaLS_31133_r The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_954ab5b-g-20140819T005040_oi[N3,noinherit][2046,4094][real]: DECaLS_1 The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_954d605-z-20140817T233642_oi[N3,noinherit][2046,4094][real]: DECaLS_1 The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_9535c38-g-20180908T001035_oi[N2,noinherit][2046,4094][real]: DECaLS_3 The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_9568098-r-20160803T001231_oi[N3,noinherit][2046,4094][real]: DECaLS_1 The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_954d605-z-20140817T233642_oi[N10,noinherit][2046,4094][real]: DECaLS_ The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_9517988-z-20170521T073526_oi[N1,noinherit][2046,4094][real]: DECaLS_4 The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_954793b-r-20140815T015933_oi[N1,noinherit][2046,4094][real]: DECaLS_4 The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_951ccd4-g-20170721T013521_oi[N1,noinherit][2046,4094][real]: DECaLS_4 The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_956b61f-z-20150411T082134_oi[N2,noinherit][2046,4094][real]: DECaLS_3 The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_9560feb-r-20180808T235520_oi[N2,noinherit][2046,4094][real]: DECaLS_3 Stage tims : Wall: 11.06 s, CPU: 0.76 s, VmPeak: 995 MB, VmSize: 995 MB, VmRSS: 172 MB, VmData: 206 MB, maxrss: 0.454644 MB Stage tims finished: 2020-06-05T06:47:28.852750 WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_9535c38-g-20180908T001035_oi[N2,noinherit][2046,4094][real]: DECaLS_3 [astropy.io.fits.card] WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_954793b-r-20140815T015933_oi[N1,noinherit][2046,4094][real]: DECaLS_4 [astropy.io.fits.card] WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_9568098-r-20160803T001231_oi[N3,noinherit][2046,4094][real]: DECaLS_1 [astropy.io.fits.card] WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_951ccd4-g-20170721T013521_oi[N1,noinherit][2046,4094][real]: DECaLS_4 [astropy.io.fits.card] WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_954ab5b-g-20140819T005040_oi[N3,noinherit][2046,4094][real]: DECaLS_1 [astropy.io.fits.card] WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_954d605-z-20140817T233642_oi[N10,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card] WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_956b61f-z-20150411T082134_oi[N2,noinherit][2046,4094][real]: DECaLS_3 [astropy.io.fits.card] WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_954d605-z-20140817T233642_oi[N3,noinherit][2046,4094][real]: DECaLS_1 [astropy.io.fits.card] WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_9517988-z-20170521T073526_oi[N1,noinherit][2046,4094][real]: DECaLS_4 [astropy.io.fits.card] WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention: DECALS_DR9_9560feb-r-20180808T235520_oi[N2,noinherit][2046,4094][real]: DECaLS_3 [astropy.io.fits.card] Resources for stage tims : 3.756 s worker CPU, 36.469 s worker Wall, Wall: 11.065 s, Cores in use: 0.41, Total efficiency (on 4 cores): 10.2 % Stage tims finished Saving pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-tims.p Saved /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-tims.p Running stage refs Running stage refs at 2020-06-05T06:47:32.590647 Reading /global/cfs/cdirs/cosmo/work/gaia/chunks-gaia-dr2-astrom-2/chunk-03992.fits Reading /global/cfs/cdirs/cosmo/work/gaia/chunks-gaia-dr2-astrom-2/chunk-04119.fits Matched 9 large galaxies to Gaia stars. Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/metrics/cus/reference-custom-246942p20053.fits Stage refs : Wall: 6.57 s, CPU: 2.85 s, VmPeak: 1035 MB, VmSize: 1029 MB, VmRSS: 207 MB, VmData: 240 MB, maxrss: 0.454644 MB Stage refs finished: 2020-06-05T06:47:39.165691 Resources for stage refs : 0.000 s worker CPU, 0.000 s worker Wall, Wall: 6.576 s, Cores in use: 0.43, Total efficiency (on 4 cores): 10.8 % Stage refs finished Running stage outliers Running stage outliers at 2020-06-05T06:47:39.167333 Failed to apply outlier mask: No such file: /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/metrics/cus/outlier-mask-custom-246942p20053.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/metrics/cus/outliers-pre-custom-246942p20053.jpg Image c4d_170721_013933_ooi_g_ls9-N1 g : masking 0 positive outlier pixels and 133 negative outlier pixels Image c4d_180908_001035_ooi_g_ls9-N2 g : masking 379 positive outlier pixels and 0 negative outlier pixels Image c4d_170521_073919_ooi_z_ls9-N1 z : masking 159 positive outlier pixels and 0 negative outlier pixels Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/metrics/cus/outlier-mask-custom-246942p20053.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/metrics/cus/outliers-post-custom-246942p20053.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/metrics/cus/outliers-masked-pos-custom-246942p20053.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/metrics/cus/outliers-masked-neg-custom-246942p20053.jpg Stage outliers : Wall: 19.88 s, CPU: 0.45 s, VmPeak: 1038 MB, VmSize: 1038 MB, VmRSS: 219 MB, VmData: 250 MB, maxrss: 0.454644 MB Stage outliers finished: 2020-06-05T06:47:59.045363 Resources for stage outliers : 0.548 s worker CPU, 0.553 s worker Wall, Wall: 19.879 s, Cores in use: 0.05, Total efficiency (on 4 cores): 1.3 % Stage outliers finished Running stage halos Running stage halos at 2020-06-05T06:47:59.047088 Stage halos : Wall: 0.36 s, CPU: 0.17 s, VmPeak: 1038 MB, VmSize: 1038 MB, VmRSS: 219 MB, VmData: 250 MB, maxrss: 0.454644 MB Stage halos finished: 2020-06-05T06:47:59.407139 Resources for stage halos : 0.222 s worker CPU, 0.564 s worker Wall, Wall: 0.361 s, Cores in use: 1.10, Total efficiency (on 4 cores): 27.5 % Stage halos finished Running stage fit_on_coadds Running stage fit_on_coadds at 2020-06-05T06:47:59.409030 PSF sigmas in coadd pixels: ['2.40', '1.81', '2.28'] Using average PSF sigma 2.1604745228821023 Gaussian PSF norm 0.1305707560011214 vs pixelized 0.109554075 average tim pixel scale / coadd scale: 1.0011892411182457 Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-copsf-g.fits.fz PSF sigmas in coadd pixels: ['1.78', '2.51', '1.92'] Using average PSF sigma 2.0712258480136483 Gaussian PSF norm 0.1361970217030718 vs pixelized 0.111347705 average tim pixel scale / coadd scale: 1.0011972057924585 Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-copsf-r.fits.fz PSF sigmas in coadd pixels: ['1.74', '2.17', '1.57'] Using average PSF sigma 1.824988034780686 Gaussian PSF norm 0.15457350207108525 vs pixelized 0.12239556 average tim pixel scale / coadd scale: 1.0012072699414636 Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-copsf-z.fits.fz Stage fit_on_coadds : Wall: 10.69 s, CPU: 0.15 s, VmPeak: 1038 MB, VmSize: 1038 MB, VmRSS: 221 MB, VmData: 250 MB, maxrss: 0.454644 MB Stage fit_on_coadds finished: 2020-06-05T06:48:10.094521 Resources for stage fit_on_coadds : 0.143 s worker CPU, 0.143 s worker Wall, Wall: 10.687 s, Cores in use: 0.03, Total efficiency (on 4 cores): 0.7 % Stage fit_on_coadds finished Running stage srcs Running stage srcs at 2020-06-05T06:48:10.096980 SED-matched filters: [('z', array([0., 0., 1.])), ('r', array([0., 1., 0.])), ('g', array([1., 0., 0.])), ('Flat', [1.0, 1.0, 1.0]), ('Red', [2.5, 1.0, 0.4])] Found 16 potential peaks Of 16 potential peaks: 5 in veto map, 2 cut by saddle test, 0 cut by aper test, 9 kept SED z : 9 new peaks Found 10 potential peaks Of 10 potential peaks: 9 in veto map, 1 cut by saddle test, 0 cut by aper test, 0 kept SED r : 0 new peaks Found 5 potential peaks Of 5 potential peaks: 4 in veto map, 1 cut by saddle test, 0 cut by aper test, 0 kept SED g : 0 new peaks Found 20 potential peaks Of 20 potential peaks: 12 in veto map, 3 cut by saddle test, 0 cut by aper test, 5 kept SED Flat : 5 new peaks Found 24 potential peaks Of 24 potential peaks: 19 in veto map, 2 cut by saddle test, 0 cut by aper test, 3 kept SED Red : 3 new peaks Adding 17 new sources Median coadd sky for g : 1.8457158e-05 Median coadd sky for r : 8.081411e-05 Median coadd sky for z : 0.00028232543 Stage srcs : Wall: 0.44 s, CPU: 0.38 s, VmPeak: 1038 MB, VmSize: 1038 MB, VmRSS: 221 MB, VmData: 250 MB, maxrss: 0.454644 MB Stage srcs finished: 2020-06-05T06:48:10.532508 Resources for stage srcs : 0.112 s worker CPU, 0.112 s worker Wall, Wall: 0.436 s, Cores in use: 1.14, Total efficiency (on 4 cores): 28.4 % Stage srcs finished Saving pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-srcs.p Saved /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-srcs.p Running stage fitblobs Running stage fitblobs at 2020-06-05T06:48:13.225645 Blob 1 of 16, id: 7, sources: 3, size: 144x115, npix 10592, brick X: 51,195, Y: 75,190, one pixel: 133 75 Blob 2 of 16, id: 13, sources: 2, size: 46x59, npix 1742, brick X: 5,51, Y: 200,259, one pixel: 41 200 Blob 3 of 16, id: 11, sources: 1, size: 26x30, npix 520, brick X: 57,83, Y: 177,207, one pixel: 66 177 Blob 4 of 16, id: 6, sources: 1, size: 24x35, npix 499, brick X: 217,241, Y: 69,104, one pixel: 227 69 Blob 5 of 16, id: 12, sources: 1, size: 27x26, npix 455, brick X: 152,179, Y: 194,220, one pixel: 164 194 Blob 2 finished, total: Wall: 0.24 s, CPU: 0.18 s, VmPeak: 958 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14676 MB Blob 3 finished, total: Wall: 0.62 s, CPU: 0.62 s, VmPeak: 956 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.146688 MB Blob 6 of 16, id: 1, sources: 1, size: 26x26, npix 425, brick X: 153,179, Y: 14,40, one pixel: 164 14 Blob 7 of 16, id: 15, sources: 1, size: 29x20, npix 401, brick X: 189,218, Y: 239,259, one pixel: 203 239 Measuring 1 iterative sources Blob 4 finished, total: Wall: 1.26 s, CPU: 1.20 s, VmPeak: 962 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14662 MB Blob 8 of 16, id: 8, sources: 1, size: 24x24, npix 370, brick X: 215,239, Y: 130,154, one pixel: 225 130 Blob 5 finished, total: Wall: 0.67 s, CPU: 0.67 s, VmPeak: 958 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14676 MB Blob 9 of 16, id: 5, sources: 1, size: 19x23, npix 295, brick X: 240,259, Y: 65,88, one pixel: 249 65 Blob 6 finished, total: Wall: 0.75 s, CPU: 0.75 s, VmPeak: 956 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.146688 MB Blob 10 of 16, id: 10, sources: 1, size: 21x21, npix 261, brick X: 203,224, Y: 166,187, one pixel: 212 166 Blob 8 finished, total: Wall: 0.80 s, CPU: 0.80 s, VmPeak: 958 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14676 MB Blob 11 of 16, id: 9, sources: 1, size: 20x21, npix 257, brick X: 173,193, Y: 141,162, one pixel: 181 141 Blob 7 finished, total: Wall: 0.96 s, CPU: 0.96 s, VmPeak: 962 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14662 MB Blob 12 of 16, id: 14, sources: 1, size: 20x20, npix 237, brick X: 232,252, Y: 215,235, one pixel: 240 215 Blob 10 finished, total: Wall: 0.33 s, CPU: 0.33 s, VmPeak: 958 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14676 MB Blob 13 of 16, id: 2, sources: 1, size: 19x19, npix 217, brick X: 109,128, Y: 31,50, one pixel: 117 31 Blob 9 finished, total: Wall: 1.13 s, CPU: 1.13 s, VmPeak: 956 MB, VmSize: 719 MB, VmRSS: 145 MB, VmData: 182 MB, maxrss: 0.14882 MB Blob 14 of 16, id: 4, sources: 1, size: 20x19, npix 209, brick X: 195,215, Y: 59,78, one pixel: 204 59 Blob 13 finished, total: Wall: 0.06 s, CPU: 0.06 s, VmPeak: 956 MB, VmSize: 719 MB, VmRSS: 145 MB, VmData: 182 MB, maxrss: 0.14882 MB Blob 15 of 16, id: 0, sources: 2, size: 20x15, npix 194, brick X: 47,67, Y: 0,15, one pixel: 51 0 Blob 11 finished, total: Wall: 0.68 s, CPU: 0.68 s, VmPeak: 962 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14662 MB Blob 16 of 16, id: 3, sources: 1, size: 18x18, npix 171, brick X: 123,141, Y: 43,61, one pixel: 131 43 Blob 14 finished, total: Wall: 0.38 s, CPU: 0.38 s, VmPeak: 956 MB, VmSize: 719 MB, VmRSS: 145 MB, VmData: 182 MB, maxrss: 0.14882 MB Blob 16 finished, total: Wall: 0.06 s, CPU: 0.06 s, VmPeak: 956 MB, VmSize: 719 MB, VmRSS: 145 MB, VmData: 182 MB, maxrss: 0.14882 MB Blob 12 finished, total: Wall: 0.66 s, CPU: 0.66 s, VmPeak: 958 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14676 MB Dropped reference star: GaiaSource at GaiaPosition: RA, Dec = (246.94874, 20.04359), pm (11.8, -7.2), parallax 1.124 with NanoMaggies: g=17.9, r=16.9, z=17.5 Reset brightness to NanoMaggies: g=21.7, r=20.3, z=18.6 Blob 15 finished, total: Wall: 0.63 s, CPU: 0.63 s, VmPeak: 962 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14662 MB Known galaxy. Initial shape: EllipseWithPriors(0.25): log r_e=0.311738, ee1=-0.0902435, ee2=0.250274 Blob 1 finished, total: Wall: 6.67 s, CPU: 6.57 s, VmPeak: 953 MB, VmSize: 720 MB, VmRSS: 146 MB, VmData: 183 MB, maxrss: 0.149224 MB Old catalog: 25 New catalog: 17 Started working on galaxy PGC058204 at Sat Jun 6 19:15:58 2020 Bands touching this brick, g r z python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 246.94268999999997 20.0539938 --width 259 --height 259 --pixscale 0.262 --threads 4 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0 runbrick.py starting at 2020-06-06T19:16:00.097654 legacypipe git version: DR9.5.2 Command-line args: ['/global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py', '--radec', '246.94268999999997', '20.0539938', '--width', '259', '--height', '259', '--pixscale', '0.262', '--threads', '4', '--outdir', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204', '--survey-dir', '/global/cfs/cdirs/cosmo/work/legacysurvey/dr9', '--run', 'south', '--write-stage', 'tims', '--write-stage', 'srcs', '--skip-calibs', '--checkpoint', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-checkpoint.p', '--pickle', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-%%(stage)s.p', '--fit-on-coadds', '--saddle-fraction', '0.2', '--saddle-min', '4.0'] python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 246.94268999999997 20.0539938 --width 259 --height 259 --pixscale 0.262 --threads 4 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0 Parsed RA,Dec 246.94268999999997 20.0539938 Starting process 48680 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057376 MB Starting process 48681 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057376 MB Starting process 48683 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057404 MB Starting process 48684 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.05738 MB Runstage writecat Runstage wise_forced Runstage coadds Runstage fitblobs Runstage srcs Reading pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-srcs.p Running stage fitblobs Running stage fitblobs at 2020-06-06T19:16:06.447007 Reading /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/PGC058204-largegalaxy-checkpoint.p Keeping 16 of 16 checkpointed results Skipping blob 7 Skipping blob 13 Skipping blob 11 Skipping blob 6 Skipping blob 12 Skipping blob 1 Skipping blob 15 Skipping blob 8 Skipping blob 5 Skipping blob 10 Skipping blob 9 Skipping blob 14 Skipping blob 2 Skipping blob 4 Skipping blob 0 Skipping blob 3 Old catalog: 25 New catalog: 17 Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/metrics/cus/blobs-custom-246942p20053.fits.gz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/metrics/cus/all-models-custom-246942p20053.fits Stage fitblobs : Wall: 7.01 s, CPU: 6.97 s, VmPeak: 843 MB, VmSize: 843 MB, VmRSS: 109 MB, VmData: 146 MB, maxrss: 0.4546 MB Stage fitblobs finished: 2020-06-06T19:16:13.453994 Resources for stage fitblobs : 0.000 s worker CPU, 0.000 s worker Wall, Wall: 7.008 s, Cores in use: 0.99, Total efficiency (on 4 cores): 24.9 % Stage fitblobs finished Running stage coadds Running stage coadds at 2020-06-06T19:16:13.455447 Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-ccds.fits Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-image-g.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-invvar-g.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-nexp-g.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-depth-g.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-galdepth-g.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-psfsize-g.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-model-g.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-chi2-g.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-blobmodel-g.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-image-r.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-invvar-r.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-nexp-r.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-depth-r.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-galdepth-r.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-psfsize-r.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-model-r.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-chi2-r.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-blobmodel-r.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-image-z.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-invvar-z.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-nexp-z.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-depth-z.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-galdepth-z.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-psfsize-z.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-model-z.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-chi2-z.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-blobmodel-z.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-depth.fits Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/tmp-legacysurvey-custom-246942p20053-image.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-image.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/tmp-legacysurvey-custom-246942p20053-model.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-model.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/tmp-legacysurvey-custom-246942p20053-blobmodel.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-blobmodel.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/tmp-legacysurvey-custom-246942p20053-resid.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-resid.jpg Stage coadds : Wall: 9.68 s, CPU: 7.94 s, VmPeak: 888 MB, VmSize: 888 MB, VmRSS: 147 MB, VmData: 183 MB, maxrss: 0.4546 MB Stage coadds finished: 2020-06-06T19:16:23.130810 Resources for stage coadds : 4.585 s worker CPU, 4.762 s worker Wall, Wall: 9.676 s, Cores in use: 1.29, Total efficiency (on 4 cores): 32.4 % Stage coadds finished Running stage wise_forced Running stage wise_forced at 2020-06-06T19:16:23.132487 Cut to 1 unWISE tiles Reading WISE tile 2464p196 band 3 Reading WISE tile 2464p196 band 1 Reading WISE tile 2464p196 band 2 Reading WISE tile 2464p196 band 4 Does not exist: /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w4-img-m.fits Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w4-img-m.fits Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w4-invvar-m.fits.gz Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w4-n-m.fits.gz Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w4-n-u.fits.gz Reading /usr/local/lib/python/wise/wise-psf-avg.fits unWISE forced photometry took Wall: 0.05 s, CPU: 0.05 s, VmPeak: 789 MB, VmSize: 789 MB, VmRSS: 138 MB, VmData: 174 MB, maxrss: 0.17984 MB Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w2-img-m.fits Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w2-invvar-m.fits.gz Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w2-n-m.fits.gz Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w2-n-u.fits.gz Reading /usr/local/lib/python/wise/wise-psf-avg.fits unWISE forced photometry took Wall: 0.04 s, CPU: 0.04 s, VmPeak: 783 MB, VmSize: 783 MB, VmRSS: 132 MB, VmData: 168 MB, maxrss: 0.19214 MB Does not exist: /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w3-img-m.fits Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w3-img-m.fits Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w3-invvar-m.fits.gz Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w3-n-m.fits.gz Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w3-n-u.fits.gz Reading /usr/local/lib/python/wise/wise-psf-avg.fits unWISE forced photometry took Wall: 0.03 s, CPU: 0.03 s, VmPeak: 783 MB, VmSize: 783 MB, VmRSS: 133 MB, VmData: 169 MB, maxrss: 0.196024 MB Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w1-img-m.fits Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w1-invvar-m.fits.gz Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w1-n-m.fits.gz Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/246/2464p196/unwise-2464p196-w1-n-u.fits.gz Reading /usr/local/lib/python/wise/wise-psf-avg.fits unWISE forced photometry took Wall: 0.03 s, CPU: 0.03 s, VmPeak: 784 MB, VmSize: 784 MB, VmRSS: 134 MB, VmData: 170 MB, maxrss: 0.197156 MB Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-image-W1.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-model-W1.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-invvar-W1.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-image-W2.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-model-W2.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-invvar-W2.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-image-W3.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-model-W3.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-invvar-W3.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-image-W4.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-model-W4.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-invvar-W4.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/tmp-legacysurvey-custom-246942p20053-wise.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-wise.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/tmp-legacysurvey-custom-246942p20053-wisemodel.jpg Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-wisemodel.jpg Setting WISE apphot Setting WISE apphot Setting WISE apphot Setting WISE apphot Stage wise_forced : Wall: 13.79 s, CPU: 10.07 s, VmPeak: 914 MB, VmSize: 914 MB, VmRSS: 154 MB, VmData: 186 MB, maxrss: 0.4546 MB Stage wise_forced finished: 2020-06-06T19:16:36.923990 Resources for stage wise_forced : 3.691 s worker CPU, 12.717 s worker Wall, Wall: 13.793 s, Cores in use: 1.00, Total efficiency (on 4 cores): 24.9 % Stage wise_forced finished Running stage writecat Running stage writecat at 2020-06-06T19:16:36.925728 Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/coadd/cus/custom-246942p20053/legacysurvey-custom-246942p20053-maskbits.fits.fz Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/tractor-i/cus/tractor-custom-246942p20053.fits Reading SFD maps... END Rejected (1), keyrecords following the END keyrecord were ignored. END Rejected (1), keyrecords following the END keyrecord were ignored. Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/tractor/cus/tractor-custom-246942p20053.fits Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/246/PGC058204/tractor/cus/brick-custom-246942p20053.sha256sum Stage writecat : Wall: 10.97 s, CPU: 10.83 s, VmPeak: 1059 MB, VmSize: 931 MB, VmRSS: 173 MB, VmData: 199 MB, maxrss: 0.4546 MB Stage writecat finished: 2020-06-06T19:16:47.896446 Resources for stage writecat : 0.000 s worker CPU, 0.000 s worker Wall, Wall: 10.972 s, Cores in use: 0.99, Total efficiency (on 4 cores): 24.7 % Stage writecat finished All done: 8.276 s worker CPU, 17.480 s worker Wall, Wall: 41.486 s, Cores in use: 1.06, Total efficiency (on 4 cores): 26.6 % Finished galaxy PGC058204 in 0.823 minutes.