Started working on galaxy PGC093908 at Fri Jun  5 06:46:40 2020
Bands touching this brick, g r z
python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 353.8463025 27.322929700000003 --width 251 --height 251 --pixscale 0.262 --threads 4 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0 

runbrick.py starting at 2020-06-05T06:46:41.072433
legacypipe git version: DR9.5.2
Command-line args: ['/global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py', '--radec', '353.8463025', '27.322929700000003', '--width', '251', '--height', '251', '--pixscale', '0.262', '--threads', '4', '--outdir', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908', '--survey-dir', '/global/cfs/cdirs/cosmo/work/legacysurvey/dr9', '--run', 'south', '--write-stage', 'tims', '--write-stage', 'srcs', '--skip-calibs', '--checkpoint', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-checkpoint.p', '--pickle', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-%%(stage)s.p', '--fit-on-coadds', '--saddle-fraction', '0.2', '--saddle-min', '4.0']
python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 353.8463025 27.322929700000003 --width 251 --height 251 --pixscale 0.262 --threads 4 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0

Parsed RA,Dec 353.8463025 27.322929700000003
Starting process 6659 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057304 MB
Starting process 6660 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057304 MB
Starting process 6661 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057308 MB
Starting process 6662 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057308 MB
Runstage writecat
Runstage wise_forced
Runstage coadds
Runstage fitblobs
Runstage srcs
Runstage fit_on_coadds
Runstage halos
Runstage outliers
Runstage refs
Runstage tims
Running stage tims
Running stage tims at 2020-06-05T06:46:42.966534
Keeping 9 CCDs:
   c4d_180901_063507_ooi_z_ls9.fits.fz c4d_180901_063507_ooi_z_ls9-S9 z exptime 250.0 propid 2014B-0404 seeing 1.33 MJD 58362.274 object DECaLS_39446_z
   c4d_181101_010231_ooi_g_ls9.fits.fz c4d_181101_010231_ooi_g_ls9-S9 g exptime 200.0 propid 2014B-0404 seeing 1.59 MJD 58423.043 object DECaLS_39446_g
   c4d_181104_014505_ooi_r_ls9.fits.fz c4d_181104_014505_ooi_r_ls9-S9 r exptime 175.0 propid 2014B-0404 seeing 1.48 MJD 58426.073 object DECaLS_39446_r
   c4d_140813_074423_ooi_z_ls9.fits.fz c4d_140813_074423_ooi_z_ls9-S16 z exptime 137.0 propid 2014B-0404 seeing 1.14 MJD 56882.320 object DECaLS_7702_z
   c4d_180810_062720_ooi_r_ls9.fits.fz c4d_180810_062720_ooi_r_ls9-S16 r exptime 40.0 propid 2014B-0404 seeing 1.34 MJD 58340.269 object DECaLS_7702_r
   c4d_180810_062448_ooi_g_ls9.fits.fz c4d_180810_062448_ooi_g_ls9-S16 g exptime 122.0 propid 2014B-0404 seeing 1.53 MJD 58340.267 object DECaLS_7702_g
   c4d_171024_014959_ooi_z_ls9.fits.fz c4d_171024_014959_ooi_z_ls9-S15 z exptime 80.0 propid 2014B-0404 seeing 1.05 MJD 58050.076 object DECaLS_23574_z
   c4d_180811_072551_ooi_r_ls9.fits.fz c4d_180811_072551_ooi_r_ls9-S15 r exptime 40.0 propid 2014B-0404 seeing 1.24 MJD 58341.310 object DECaLS_23574_r
   c4d_180811_072320_ooi_g_ls9.fits.fz c4d_180811_072320_ooi_g_ls9-S15 g exptime 123.0 propid 2014B-0404 seeing 1.38 MJD 58341.308 object DECaLS_23574_g
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_954bf08-z-20140813T074112_oi[S16,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9537eb2-r-20181104T014505_oi[S9,noinherit][2046,4094][real]: DECaLS_3
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9537f22-g-20181101T010231_oi[S9,noinherit][2046,4094][real]: DECaLS_3
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_N10-z-20180901T063507_oi[S9,noinherit][2046,4094][real]: DECaLS_39446
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9531ac3-r-20180810T062720_oi[S16,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_953255f-r-20180811T072551_oi[S15,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9532385-g-20180810T062448_oi[S16,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_95202c1-z-20171024T014959_oi[S15,noinherit][2046,4094][real]: DECaLS_
The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_95328e1-g-20180811T072320_oi[S15,noinherit][2046,4094][real]: DECaLS_
Stage tims : Wall: 11.62 s, CPU: 0.91 s, VmPeak: 995 MB, VmSize: 995 MB, VmRSS: 173 MB, VmData: 206 MB, maxrss: 0.454688 MB
Stage tims finished: 2020-06-05T06:46:54.587266
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9537f22-g-20181101T010231_oi[S9,noinherit][2046,4094][real]: DECaLS_3 [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_953255f-r-20180811T072551_oi[S15,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9537eb2-r-20181104T014505_oi[S9,noinherit][2046,4094][real]: DECaLS_3 [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9532385-g-20180810T062448_oi[S16,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_954bf08-z-20140813T074112_oi[S16,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_9531ac3-r-20180810T062720_oi[S16,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_95328e1-g-20180811T072320_oi[S15,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_N10-z-20180901T063507_oi[S9,noinherit][2046,4094][real]: DECaLS_39446 [astropy.io.fits.card]
WARNING: The following header keyword is invalid or follows an unrecognized non-standard convention:
DECALS_DR9_95202c1-z-20171024T014959_oi[S15,noinherit][2046,4094][real]: DECaLS_ [astropy.io.fits.card]
Resources for stage tims : 3.729 s worker CPU, 31.934 s worker Wall, Wall: 11.622 s, Cores in use: 0.40, Total efficiency (on 4 cores): 10.0 %
Stage tims finished
Saving pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-tims.p
Saved /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-tims.p
Running stage refs
Running stage refs at 2020-06-05T06:46:57.389182
Reading /global/cfs/cdirs/cosmo/work/gaia/chunks-gaia-dr2-astrom-2/chunk-03262.fits
Reading /global/cfs/cdirs/cosmo/work/gaia/chunks-gaia-dr2-astrom-2/chunk-03389.fits
Reading /global/cfs/cdirs/cosmo/work/gaia/chunks-gaia-dr2-astrom-2/chunk-03518.fits
Matched 37 large galaxies to Gaia stars.
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/reference-custom-353846p27322.fits
Stage refs : Wall: 7.04 s, CPU: 2.41 s, VmPeak: 1028 MB, VmSize: 1022 MB, VmRSS: 201 MB, VmData: 234 MB, maxrss: 0.454688 MB
Stage refs finished: 2020-06-05T06:47:04.432100
Resources for stage refs : 0.000 s worker CPU, 0.000 s worker Wall, Wall: 7.044 s, Cores in use: 0.34, Total efficiency (on 4 cores): 8.6 %
Stage refs finished
Running stage outliers
Running stage outliers at 2020-06-05T06:47:04.433583
Failed to apply outlier mask: No such file: /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/outlier-mask-custom-353846p27322.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/outliers-pre-custom-353846p27322.jpg
Image c4d_180901_063507_ooi_z_ls9-S9 z : masking 320 positive outlier pixels and 0 negative outlier pixels
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/outlier-mask-custom-353846p27322.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/outliers-post-custom-353846p27322.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/outliers-masked-pos-custom-353846p27322.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/outliers-masked-neg-custom-353846p27322.jpg
Stage outliers : Wall: 27.32 s, CPU: 0.48 s, VmPeak: 1032 MB, VmSize: 1032 MB, VmRSS: 212 MB, VmData: 243 MB, maxrss: 0.454688 MB
Stage outliers finished: 2020-06-05T06:47:31.756511
Resources for stage outliers : 0.600 s worker CPU, 0.622 s worker Wall, Wall: 27.324 s, Cores in use: 0.04, Total efficiency (on 4 cores): 1.0 %
Stage outliers finished
Running stage halos
Running stage halos at 2020-06-05T06:47:31.758366
Stage halos : Wall: 0.38 s, CPU: 0.18 s, VmPeak: 1032 MB, VmSize: 1032 MB, VmRSS: 212 MB, VmData: 243 MB, maxrss: 0.454688 MB
Stage halos finished: 2020-06-05T06:47:32.134247
Resources for stage halos : 0.243 s worker CPU, 0.706 s worker Wall, Wall: 0.377 s, Cores in use: 1.11, Total efficiency (on 4 cores): 27.8 %
Stage halos finished
Running stage fit_on_coadds
Running stage fit_on_coadds at 2020-06-05T06:47:32.136021
PSF sigmas in coadd pixels: ['2.58', '2.49', '2.24']
Using average PSF sigma 2.438062090433724
Gaussian PSF norm 0.11570451502475654 vs pixelized 0.10103115
average tim pixel scale / coadd scale: 1.0013272066046093
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-copsf-g.fits.fz
PSF sigmas in coadd pixels: ['2.40', '2.17', '2.02']
Using average PSF sigma 2.195285086457645
Gaussian PSF norm 0.12850029980801803 vs pixelized 0.10480878
average tim pixel scale / coadd scale: 1.0013311056292238
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-copsf-r.fits.fz
PSF sigmas in coadd pixels: ['2.16', '1.86', '1.71']
Using average PSF sigma 1.9080408914927511
Gaussian PSF norm 0.14784525480121236 vs pixelized 0.09255677
average tim pixel scale / coadd scale: 1.0012868833585948
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-copsf-z.fits.fz
Stage fit_on_coadds : Wall: 12.13 s, CPU: 0.15 s, VmPeak: 1032 MB, VmSize: 1032 MB, VmRSS: 214 MB, VmData: 243 MB, maxrss: 0.454688 MB
Stage fit_on_coadds finished: 2020-06-05T06:47:44.263253
Resources for stage fit_on_coadds : 0.127 s worker CPU, 0.127 s worker Wall, Wall: 12.128 s, Cores in use: 0.02, Total efficiency (on 4 cores): 0.6 %
Stage fit_on_coadds finished
Running stage srcs
Running stage srcs at 2020-06-05T06:47:44.265783
SED-matched filters: [('z', array([0., 0., 1.])), ('r', array([0., 1., 0.])), ('g', array([1., 0., 0.])), ('Flat', [1.0, 1.0, 1.0]), ('Red', [2.5, 1.0, 0.4])]
Found 69 potential peaks
Of 69 potential peaks: 50 in veto map, 7 cut by saddle test, 0 cut by aper test, 12 kept
SED z : 12 new peaks
Found 57 potential peaks
Of 57 potential peaks: 42 in veto map, 7 cut by saddle test, 2 cut by aper test, 6 kept
SED r : 6 new peaks
Found 48 potential peaks
Of 48 potential peaks: 37 in veto map, 8 cut by saddle test, 0 cut by aper test, 3 kept
SED g : 3 new peaks
Found 66 potential peaks
Of 66 potential peaks: 53 in veto map, 10 cut by saddle test, 0 cut by aper test, 3 kept
SED Flat : 3 new peaks
Found 71 potential peaks
Of 71 potential peaks: 60 in veto map, 10 cut by saddle test, 0 cut by aper test, 1 kept
SED Red : 1 new peaks
Adding 25 new sources
Median coadd sky for g : 0.00016255604
Median coadd sky for r : 0.0004728808
Median coadd sky for z : 0.0012675321
Stage srcs : Wall: 0.59 s, CPU: 0.55 s, VmPeak: 1032 MB, VmSize: 1032 MB, VmRSS: 214 MB, VmData: 243 MB, maxrss: 0.454688 MB
Stage srcs finished: 2020-06-05T06:47:44.853624
Resources for stage srcs : 0.096 s worker CPU, 0.105 s worker Wall, Wall: 0.589 s, Cores in use: 1.09, Total efficiency (on 4 cores): 27.3 %
Stage srcs finished
Saving pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-srcs.p
Saved /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-srcs.p
Running stage fitblobs
Running stage fitblobs at 2020-06-05T06:47:48.425884
Blob 1 of 9, id: 4, sources: 17, size: 251x224, npix 36504, brick X: 0,251, Y: 16,240, one pixel: 105 16
Blob 2 of 9, id: 2, sources: 1, size: 50x41, npix 1346, brick X: 118,168, Y: 2,43, one pixel: 144 2
Blob 3 of 9, id: 8, sources: 4, size: 59x22, npix 1019, brick X: 24,83, Y: 229,251, one pixel: 52 229
Blob 4 of 9, id: 7, sources: 1, size: 37x24, npix 621, brick X: 163,200, Y: 227,251, one pixel: 173 227
Blob 5 of 9, id: 0, sources: 1, size: 19x30, npix 401, brick X: 0,19, Y: 0,30, one pixel: 5 0
Dropped reference star: GaiaSource at GaiaPosition: RA, Dec = (353.85038, 27.34640), pm (0.8, 4.4), parallax 1.394 with NanoMaggies: g=11.8, r=11.6, z=11.6
Reset brightness to NanoMaggies: g=11.8, r=11.6, z=11.6
Dropped reference star: GaiaSource at GaiaPosition: RA, Dec = (353.85170, 27.33281), pm (-2.7, -4.0), parallax 0.268 with NanoMaggies: g=15.9, r=15.8, z=16.4
Reset brightness to NanoMaggies: g=16.5, r=16.1, z=16
Measuring 1 iterative sources
Blob 4 finished, total: Wall: 0.36 s, CPU: 0.36 s, VmPeak: 961 MB, VmSize: 719 MB, VmRSS: 145 MB, VmData: 182 MB, maxrss: 0.148208 MB
Blob 6 of 9, id: 3, sources: 1, size: 24x26, npix 394, brick X: 48,72, Y: 8,34, one pixel: 57 8
Blob 3 finished, total: Wall: 0.54 s, CPU: 0.54 s, VmPeak: 961 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14694 MB
Measuring 1 iterative sources
Blob 7 of 9, id: 1, sources: 2, size: 29x16, npix 334, brick X: 189,218, Y: 0,16, one pixel: 191 0
Measuring 1 iterative sources
Blob 5 finished, total: Wall: 0.89 s, CPU: 0.89 s, VmPeak: 961 MB, VmSize: 719 MB, VmRSS: 145 MB, VmData: 182 MB, maxrss: 0.148208 MB
Blob 8 of 9, id: 5, sources: 1, size: 20x19, npix 217, brick X: 1,21, Y: 170,189, one pixel: 10 170
Blob 2 finished, total: Wall: 1.35 s, CPU: 1.34 s, VmPeak: 955 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14656 MB
Blob 9 of 9, id: 6, sources: 1, size: 17x17, npix 145, brick X: 15,32, Y: 193,210, one pixel: 23 193
Blob 6 finished, total: Wall: 0.36 s, CPU: 0.36 s, VmPeak: 961 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14694 MB
Blob 8 finished, total: Wall: 0.05 s, CPU: 0.05 s, VmPeak: 955 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14656 MB
Dropped reference star: GaiaSource at GaiaPosition: RA, Dec = (353.83990, 27.31375), pm (-4.4, -10.8), parallax -1.796 with NanoMaggies: g=22.3, r=20.8, z=19.5
Reset brightness to NanoMaggies: g=21.4, r=20.7, z=20.3
Blob 7 finished, total: Wall: 0.14 s, CPU: 0.14 s, VmPeak: 961 MB, VmSize: 719 MB, VmRSS: 145 MB, VmData: 182 MB, maxrss: 0.148208 MB
Blob 9 finished, total: Wall: 0.10 s, CPU: 0.10 s, VmPeak: 961 MB, VmSize: 719 MB, VmRSS: 143 MB, VmData: 182 MB, maxrss: 0.14694 MB
Known galaxy.  Initial shape: EllipseWithPriors(0.25): log r_e=1.58918, ee1=-0.308311, ee2=-0.182158
Measuring 9 iterative sources
Blob 1 finished, total: Wall: 19.14 s, CPU: 19.02 s, VmPeak: 955 MB, VmSize: 711 MB, VmRSS: 143 MB, VmData: 174 MB, maxrss: 0.172756 MB
Old catalog: 32
New catalog: 32
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/blobs-custom-353846p27322.fits.gz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/all-models-custom-353846p27322.fits
Stage fitblobs : Wall: 29.93 s, CPU: 0.28 s, VmPeak: 1032 MB, VmSize: 1032 MB, VmRSS: 216 MB, VmData: 243 MB, maxrss: 0.454688 MB
Stage fitblobs finished: 2020-06-05T06:48:18.358489
Resources for stage fitblobs : 22.897 s worker CPU, 23.801 s worker Wall, Wall: 29.934 s, Cores in use: 0.77, Total efficiency (on 4 cores): 19.4 %
Stage fitblobs finished
Running stage coadds
Running stage coadds at 2020-06-05T06:48:18.360726
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-ccds.fits
Started working on galaxy PGC093908 at Sat Jun  6 20:47:30 2020
Bands touching this brick, g r z
python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 353.8463025 27.322929700000003 --width 251 --height 251 --pixscale 0.262 --threads 4 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0 

runbrick.py starting at 2020-06-06T20:47:31.818869
legacypipe git version: DR9.5.2
Command-line args: ['/global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py', '--radec', '353.8463025', '27.322929700000003', '--width', '251', '--height', '251', '--pixscale', '0.262', '--threads', '4', '--outdir', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908', '--survey-dir', '/global/cfs/cdirs/cosmo/work/legacysurvey/dr9', '--run', 'south', '--write-stage', 'tims', '--write-stage', 'srcs', '--skip-calibs', '--checkpoint', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-checkpoint.p', '--pickle', '/global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-%%(stage)s.p', '--fit-on-coadds', '--saddle-fraction', '0.2', '--saddle-min', '4.0']
python /global/homes/i/ioannis/repos/git/legacypipe/py/legacypipe/runbrick.py --radec 353.8463025 27.322929700000003 --width 251 --height 251 --pixscale 0.262 --threads 4 --outdir /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908 --survey-dir /global/cfs/cdirs/cosmo/work/legacysurvey/dr9 --run south --write-stage tims --write-stage srcs --skip-calibs --checkpoint /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-checkpoint.p --pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-%%(stage)s.p --fit-on-coadds --saddle-fraction 0.2 --saddle-min 4.0

Parsed RA,Dec 353.8463025 27.322929700000003
Starting process 63009 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057308 MB
Starting process 63010 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057308 MB
Starting process 63011 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057308 MB
Starting process 63012 Wall: -0.00 s, CPU: -0.00 s, VmPeak: 632 MB, VmSize: 632 MB, VmRSS: 56 MB, VmData: 127 MB, maxrss: 0.057316 MB
Runstage writecat
Runstage wise_forced
Runstage coadds
Runstage fitblobs
Runstage srcs
Reading pickle /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-srcs.p
Running stage fitblobs
Running stage fitblobs at 2020-06-06T20:47:37.506501
Reading /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/PGC093908-largegalaxy-checkpoint.p
Keeping 9 of 9 checkpointed results
Skipping blob 4
Skipping blob 2
Skipping blob 8
Skipping blob 7
Skipping blob 0
Skipping blob 3
Skipping blob 1
Skipping blob 5
Skipping blob 6
Old catalog: 32
New catalog: 32
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/blobs-custom-353846p27322.fits.gz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/metrics/cus/all-models-custom-353846p27322.fits
Stage fitblobs : Wall: 6.04 s, CPU: 5.99 s, VmPeak: 843 MB, VmSize: 843 MB, VmRSS: 109 MB, VmData: 147 MB, maxrss: 0.454588 MB
Stage fitblobs finished: 2020-06-06T20:47:43.544135
Resources for stage fitblobs : 0.000 s worker CPU, 0.000 s worker Wall, Wall: 6.039 s, Cores in use: 0.99, Total efficiency (on 4 cores): 24.8 %
Stage fitblobs finished
Running stage coadds
Running stage coadds at 2020-06-06T20:47:43.545840
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-ccds.fits
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-image-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-invvar-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-nexp-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-depth-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-galdepth-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-psfsize-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-model-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-chi2-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-blobmodel-g.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-image-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-invvar-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-nexp-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-depth-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-galdepth-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-psfsize-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-model-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-chi2-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-blobmodel-r.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-image-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-invvar-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-nexp-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-depth-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-galdepth-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-psfsize-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-model-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-chi2-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-blobmodel-z.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-depth.fits
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/tmp-legacysurvey-custom-353846p27322-image.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-image.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/tmp-legacysurvey-custom-353846p27322-model.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-model.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/tmp-legacysurvey-custom-353846p27322-blobmodel.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-blobmodel.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/tmp-legacysurvey-custom-353846p27322-resid.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-resid.jpg
Stage coadds : Wall: 6.97 s, CPU: 5.46 s, VmPeak: 888 MB, VmSize: 888 MB, VmRSS: 145 MB, VmData: 182 MB, maxrss: 0.454588 MB
Stage coadds finished: 2020-06-06T20:47:50.514654
Resources for stage coadds : 4.870 s worker CPU, 5.145 s worker Wall, Wall: 6.970 s, Cores in use: 1.48, Total efficiency (on 4 cores): 37.0 %
Stage coadds finished
Running stage wise_forced
Running stage wise_forced at 2020-06-06T20:47:50.516241
Cut to 1 unWISE tiles
Reading WISE tile 3532p272 band 2
Reading WISE tile 3532p272 band 1
Reading WISE tile 3532p272 band 3
Reading WISE tile 3532p272 band 4
Does not exist: /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w3-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w3-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w3-invvar-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w3-n-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w3-n-u.fits.gz
Reading /usr/local/lib/python/wise/wise-psf-avg.fits
unWISE forced photometry took Wall: 0.08 s, CPU: 0.08 s, VmPeak: 783 MB, VmSize: 782 MB, VmRSS: 134 MB, VmData: 168 MB, maxrss: 0.19178 MB
Does not exist: /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w4-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w4-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w4-invvar-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w4-n-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/allwise/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w4-n-u.fits.gz
Reading /usr/local/lib/python/wise/wise-psf-avg.fits
unWISE forced photometry took Wall: 0.06 s, CPU: 0.06 s, VmPeak: 789 MB, VmSize: 788 MB, VmRSS: 140 MB, VmData: 174 MB, maxrss: 0.179892 MB
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w1-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w1-invvar-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w1-n-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w1-n-u.fits.gz
Reading /usr/local/lib/python/wise/wise-psf-avg.fits
unWISE forced photometry took Wall: 0.05 s, CPU: 0.05 s, VmPeak: 784 MB, VmSize: 784 MB, VmRSS: 137 MB, VmData: 170 MB, maxrss: 0.197832 MB
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w2-img-m.fits
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w2-invvar-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w2-n-m.fits.gz
Reading /global/cfs/cdirs/cosmo/data/unwise/neo6/unwise-coadds/fulldepth/353/3532p272/unwise-3532p272-w2-n-u.fits.gz
Reading /usr/local/lib/python/wise/wise-psf-avg.fits
unWISE forced photometry took Wall: 0.05 s, CPU: 0.05 s, VmPeak: 783 MB, VmSize: 783 MB, VmRSS: 134 MB, VmData: 168 MB, maxrss: 0.195608 MB
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-image-W1.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-model-W1.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-invvar-W1.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-image-W2.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-model-W2.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-invvar-W2.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-image-W3.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-model-W3.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-invvar-W3.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-image-W4.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-model-W4.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-invvar-W4.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/tmp-legacysurvey-custom-353846p27322-wise.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-wise.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/tmp-legacysurvey-custom-353846p27322-wisemodel.jpg
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-wisemodel.jpg
Setting WISE apphot
Setting WISE apphot
Setting WISE apphot
Setting WISE apphot
Stage wise_forced : Wall: 6.44 s, CPU: 3.93 s, VmPeak: 916 MB, VmSize: 916 MB, VmRSS: 154 MB, VmData: 187 MB, maxrss: 0.454588 MB
Stage wise_forced finished: 2020-06-06T20:47:56.955631
Resources for stage wise_forced : 3.702 s worker CPU, 7.101 s worker Wall, Wall: 6.440 s, Cores in use: 1.19, Total efficiency (on 4 cores): 29.6 %
Stage wise_forced finished
Running stage writecat
Running stage writecat at 2020-06-06T20:47:56.957177
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/coadd/cus/custom-353846p27322/legacysurvey-custom-353846p27322-maskbits.fits.fz
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/tractor-i/cus/tractor-custom-353846p27322.fits
Reading SFD maps...
END                                                                             
  Rejected (1), keyrecords following the END keyrecord were ignored.
END                                                                             
  Rejected (1), keyrecords following the END keyrecord were ignored.
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/tractor/cus/tractor-custom-353846p27322.fits
Wrote /global/cscratch1/sd/ioannis/SGA-data-dr9alpha/353/PGC093908/tractor/cus/brick-custom-353846p27322.sha256sum
Stage writecat : Wall: 5.39 s, CPU: 4.06 s, VmPeak: 1060 MB, VmSize: 932 MB, VmRSS: 173 MB, VmData: 199 MB, maxrss: 0.454588 MB
Stage writecat finished: 2020-06-06T20:48:02.348885
Resources for stage writecat : 0.000 s worker CPU, 0.000 s worker Wall, Wall: 5.393 s, Cores in use: 0.75, Total efficiency (on 4 cores): 18.8 %
Stage writecat finished
All done: 8.573 s worker CPU, 12.247 s worker Wall, Wall: 24.877 s, Cores in use: 1.13, Total efficiency (on 4 cores): 28.2 %
Finished galaxy PGC093908 in 0.536 minutes.