"""
This script sets up and runs a series of diagnostics for the E3SM model output.

The diagnostics include:
- ENSO diagnostics
- Tropical subseasonal variability diagnostics
- QBO diagnostics
- Diurnal cycle diagnostics
- Streamflow diagnostics
- Tropical cyclone analysis
- ARM diagnostics

The script configures the parameters for each diagnostic, including paths to
model output and observational data, time periods for analysis, and output
settings. It then runs the diagnostics using the e3sm_diags package.

Parameters:
- case: The name of the model case.
- short_name: A short name for the model case.
- results_dir: Directory where the results will be saved.
- test_climo: Path to the model climatology data.
- test_ts: Path to the model time-series data.
- test_ts_daily_dir: Path to the model daily time-series data.
- ref_climo: Path to the reference climatology data.
- ref_ts: Path to the reference time-series data.
- start_yr: Start year for the analysis.
- end_yr: End year for the analysis.

The script uses multiprocessing to speed up the diagnostics computation.

Example usage:
    python complete_run_script.py
"""
import sys

from e3sm_diags.parameter.arm_diags_parameter import ARMDiagsParameter
from e3sm_diags.parameter.core_parameter import CoreParameter
from e3sm_diags.parameter.diurnal_cycle_parameter import DiurnalCycleParameter
from e3sm_diags.parameter.enso_diags_parameter import EnsoDiagsParameter
from e3sm_diags.parameter.qbo_parameter import QboParameter
from e3sm_diags.parameter.streamflow_parameter import StreamflowParameter
from e3sm_diags.parameter.tc_analysis_parameter import TCAnalysisParameter
from e3sm_diags.parameter.tropical_subseasonal_parameter import (
    TropicalSubseasonalParameter,
)
from e3sm_diags.run import runner

case = "extendedOutput.v3.LR.historical_0101"
short_name = "v3.LR.historical_0101"

# TODO: Update MAIN_DIR to match the current directory name.
MAIN_DIR = "25-01-06-branch-907-debug-merra2"
results_dir = f"/global/cfs/cdirs/e3sm/www/e3sm_diags/complete_run/{MAIN_DIR}/"

test_climo = "/global/cfs/cdirs/e3sm/chengzhu/tutorial2024/v3.LR.historical_0101/post/atm/180x360_aave/clim/15yr"
test_ts = "/global/cfs/cdirs/e3sm/chengzhu/tutorial2024/v3.LR.historical_0101/post/atm/180x360_aave/ts/monthly/15yr"
test_ts_daily_dir = "/global/cfs/cdirs/e3sm/chengzhu/tutorial2024/v3.LR.historical_0101/post/atm/180x360_aave/ts/daily/15yr"

ref_climo = "/global/cfs/cdirs/e3sm/diagnostics/observations/Atm/climatology/"
ref_ts = "/global/cfs/cdirs/e3sm/diagnostics/observations/Atm/time-series"

start_yr = "2000"
end_yr = "2014"

param = CoreParameter()

# Model
param.test_data_path = test_climo
param.test_name = case
param.short_test_name = short_name

# Ref/Obs
param.reference_data_path = ref_climo

# Output dir
param.results_dir = results_dir

# Additional settings
param.run_type = "model_vs_obs"
param.diff_title = "Model - Observations"
param.output_format = ["png"]
param.output_format_subplot = []
param.multiprocessing = True
param.num_workers = 24
param.save_netcdf = True
param.seasons = ["ANN"]
params = [param]

# # Model
# enso_param = EnsoDiagsParameter()
# enso_param.test_data_path = test_ts
# # enso_param.test_name = short_name
# enso_param.test_start_yr = start_yr
# enso_param.test_end_yr = end_yr

# # Obs
# enso_param.reference_data_path = ref_ts
# enso_param.ref_start_yr = start_yr
# enso_param.ref_end_yr = end_yr

# enso_param.save_netcdf = True
# params.append(enso_param)

# trop_param = TropicalSubseasonalParameter()
# trop_param.test_data_path = test_ts_daily_dir
# # trop_param.test_name = short_name
# trop_param.test_start_yr = start_yr
# trop_param.test_end_yr = end_yr

# # Obs
# trop_param.reference_data_path = ref_ts
# trop_param.ref_start_yr = "2001"
# trop_param.ref_end_yr = "2010"

# trop_param.save_netcdf = True
# params.append(trop_param)

# qbo_param = QboParameter()
# qbo_param.test_data_path = test_ts
# # qbo_param.test_name = short_name
# qbo_param.test_start_yr = start_yr
# qbo_param.test_end_yr = end_yr
# qbo_param.ref_start_yr = start_yr
# qbo_param.ref_end_yr = end_yr

# # Obs
# qbo_param.reference_data_path = ref_ts

# qbo_param.save_netcdf = True
# params.append(qbo_param)

# dc_param = DiurnalCycleParameter()
# dc_param.test_data_path = "/global/cfs/cdirs/e3sm/chengzhu/tutorial2024/v3.LR.historical_0101/post/atm/180x360_aave/clim_diurnal_8xdaily/"
# # dc_param.short_test_name = short_name
# # Plotting diurnal cycle amplitude on different scales. Default is True
# dc_param.normalize_test_amp = False

# # Obs
# dc_param.reference_data_path = ref_climo

# dc_param.save_netcdf = True
# params.append(dc_param)

# streamflow_param = StreamflowParameter()
# streamflow_param.reference_data_path = ref_ts
# streamflow_param.test_data_path = "/global/cfs/cdirs/e3sm/chengzhu/tutorial2024/v3.LR.historical_0101/post/rof/native/ts/monthly/15yr/"
# # streamflow_param.test_name = short_name
# streamflow_param.test_start_yr = start_yr
# streamflow_param.test_end_yr = end_yr

# # Obs
# streamflow_param.reference_data_path = ref_ts
# streamflow_param.ref_start_yr = (
#     "1986"  # Streamflow gauge station data range from year 1986 to 1995
# )
# streamflow_param.ref_end_yr = "1995"

# streamflow_param.save_netcdf = True
# params.append(streamflow_param)

# tc_param = TCAnalysisParameter()
# tc_param.test_data_path = "/global/cfs/cdirs/e3sm/chengzhu/tutorial2024/v3.LR.historical_0101/post/atm/tc-analysis_2000_2014"
# # tc_param.short_test_name = short_name
# tc_param.test_start_yr = start_yr
# tc_param.test_end_yr = end_yr

# # Obs
# tc_param.reference_data_path = (
#     "/global/cfs/cdirs/e3sm/diagnostics/observations/Atm/tc-analysis/"
# )
# # For model vs obs, the ref start and end year can be any four digit strings
# # For now, use all available years from obs by default
# tc_param.ref_start_yr = "1979"
# tc_param.ref_end_yr = "2018"

# tc_param.save_netcdf = True
# params.append(tc_param)

# arm_param = ARMDiagsParameter()
# arm_param.reference_data_path = (
#     "/global/cfs/cdirs/e3sm/diagnostics/observations/Atm/arm-diags-data"
# )
# arm_param.ref_name = "armdiags"
# arm_param.test_data_path = (
#     "/global/cfs/cdirs/e3sm/chengzhu/tutorial2024/v3.LR.historical_0101/post/atm/site"
# )
# arm_param.test_name = short_name
# arm_param.test_start_yr = start_yr
# arm_param.test_end_yr = end_yr
# # For model vs obs, the ref start and end year can be any four digit strings.
# # For now, will use all available years form obs
# arm_param.ref_start_yr = "0001"
# arm_param.ref_end_yr = "0001"

# arm_param.save_netcdf = True
# params.append(arm_param)

# Run
runner.sets_to_run = [
    "lat_lon",
    # "zonal_mean_xy",
    # "zonal_mean_2d",
    # "polar",
    # "cosp_histogram",
    # "meridional_mean_2d",
    # "enso_diags",
    # "qbo",
    # "diurnal_cycle",
    # "annual_cycle_zonal_mean",
    # "streamflow",
    # "zonal_mean_2d_stratosphere",
    # "arm_diags",
    # "tc_analysis",
    # "aerosol_aeronet",
    # "aerosol_budget",
    # "tropical_subseasonal",
]

cfg_path = "auxiliary_tools/cdat_regression_testing/906-v3_complete_run/debug-missing-merra2-files/debug-missing.cfg"
sys.argv.extend(["--diags", cfg_path])

runner.run_diags(params)
