HipMer Portal

HipMer is a high-performance application that produces high-quality de novo assemblies for very large-scale genomes. This portal offers the opportunity for anyone to submit sequence data for assembly using HipMer on NERSC supercomputers, for free. In general, it is possible to assemble very large genomes, with terabytes of sequence data. Apply now to see if your project is a candidate.


Let us assemble your large scale de novo genome for you, for free.

HipMer Source Code

The source code for HipMer is available under an open-source MIT license and can be downloaded from