extras/harmonized_table.db
biosample
['accession_biosample_id', 'attribute', 'entrez_label', 'entrez_target', 'entrez_value']


target/biosample_basex.db
biosample_basex_merged
['accession', 'date_of_sars_cov_2_vaccination', 'emp500_principal_investigator', 'emp500_study_id', 'emp500_title', 'entrez_links', 'geo_loc_exposure', 'primary_id', 'prior_sars_cov_2_vaccination', 'purpose_of_ww_sampling', 'raw_id', 'sra_id', 'ww_processing_protocol', 'ww_sample_site', 'ww_surv_jurisdiction', 'ww_surv_system_sample_id']


['abs_air_humidity', 'affection_status', 'age', 'agrochem_addition', 'air_temp', 'air_temp_regm', 'al_sat', 'al_sat_meth', 'alkalinity', 'alkyl_diethers', 'altitude', 'aminopept_act', 'ammonium', 'amniotic_fluid_color', 'analyte_type', 'anamorph', 'annual_season_precpt', 'annual_season_temp', 'antibiotic_regm', 'antiviral_treatment_agent', 'atmospheric_data', 'authority', 'bac_prod', 'bac_resp', 'bacteria_carb_prod', 'barometric_press', 'beta_lactamase_family', 'bio_material', 'biochem_oxygen_dem', 'biomass', 'biomaterial_provider', 'biospecimen_repository', 'biospecimen_repository_sample_id', 'biotic_relationship', 'biovar', 'birth_control', 'birth_date', 'birth_location', 'bishomohopanol', 'blood_blood_disord', 'body_habitat', 'body_mass_index', 'body_product', 'breed', 'breeding_history', 'breeding_method', 'bromide', 'build_occup_type', 'building_setting', 'calcium', 'carb_dioxide', 'carb_nitro_ratio', 'carbapenemase', 'cell_line', 'cell_subtype', 'cell_type', 'chem_administration', 'chem_mutagen', 'chem_oxygen_dem', 'child_of', 'chloride', 'chlorophyll', 'climate_environment', 'clone', 'clone_lib', 'collected_by', 'collection_date', 'collection_device', 'collection_method', 'component_organism', 'compound', 'conduc', 'crop_rotation', 'cultivar', 'culture_collection', 'cur_land_use', 'cur_vegetation', 'cur_vegetation_meth', 'date_of_prior_antiviral_treat', 'date_of_prior_sars_cov_2_infection', 'death_date', 'density', 'depth', 'derived_from', 'dermatology_disord', 'description', 'dev_stage', 'dew_point', 'diet', 'diet_last_six_month', 'diether_lipids', 'disease', 'disease_stage', 'diss_carb_dioxide', 'diss_hydrogen', 'diss_inorg_carb', 'diss_inorg_nitro', 'diss_inorg_phosp', 'diss_org_carb', 'diss_org_nitro', 'diss_oxygen', 'dna_source', 'doi', 'dominant_hand', 'dose', 'douche', 'down_par', 'drainage_class', 'drug_usage', 'dry_mass', 'ecotype', 'edta_inhibitor_tested', 'efficiency_percent', 'elev', 'emulsions', 'encoded_traits', 'env_broad_scale', 'env_local_scale', 'env_medium', 'env_package', 'estimated_size', 'ethnicity', 'experimental_factor', 'extrachrom_elements', 'extreme_event', 'extreme_salinity', 'family_id', 'family_relationship', 'fao_class', 'fertilizer_regm', 'filter_type', 'fire', 'flooding', 'fluor', 'foetal_health_stat', 'forma', 'forma_specialis', 'fungicide_regm', 'gap_accession', 'gap_consent_code', 'gap_consent_short_name', 'gap_sample_id', 'gap_subject_id', 'gaseous_environment', 'gaseous_substances', 'gastrointest_disord', 'genotype', 'geo_loc_name', 'gestation_state', 'gisaid_accession', 'gisaid_virus_name', 'glucosidase_act', 'gravidity', 'gravity', 'growth_hormone_regm', 'growth_med', 'growth_protocol', 'gynecologic_disord', 'haplotype', 'health_state', 'heat_cool_type', 'heavy_metals', 'heavy_metals_meth', 'height_or_length', 'herbicide_regm', 'histological_type', 'hiv_stat', 'horizon', 'horizon_meth', 'host', 'host_age', 'host_anatomical_material', 'host_anatomical_part', 'host_blood_press_diast', 'host_blood_press_syst', 'host_body_habitat', 'host_body_mass_index', 'host_body_product', 'host_body_temp', 'host_color', 'host_common_name', 'host_description', 'host_diet', 'host_disease', 'host_disease_outcome', 'host_disease_stage', 'host_dry_mass', 'host_family_relationship', 'host_genotype', 'host_growth_cond', 'host_health_state', 'host_height', 'host_hiv_stat', 'host_infra_specific_name', 'host_infra_specific_rank', 'host_last_meal', 'host_length', 'host_life_stage', 'host_occupation', 'host_phenotype', 'host_pulse', 'host_recent_travel_loc', 'host_sex', 'host_shape', 'host_specimen_voucher', 'host_subject_id', 'host_substrate', 'host_taxid', 'host_tissue_sampled', 'host_tot_mass', 'host_wet_mass', 'hrt', 'humidity', 'humidity_regm', 'hysterectomy', 'id', 'identified_by', 'ihmc_medication_code', 'image_file', 'indoor_space', 'indoor_surf', 'indust_eff_percent', 'infra_specific_name', 'infra_specific_rank', 'inorg_particles', 'investigation_type', 'is_tumor', 'isol_growth_condt', 'isolate', 'isolate_name_alias', 'isolation_source', 'karyotype', 'kidney_disord', 'lab_host', 'label', 'last_meal', 'lat_lon', 'life_stage', 'light_intensity', 'light_type', 'link_addit_analys', 'link_class_info', 'link_climate_info', 'liver_disord', 'local_class', 'local_class_meth', 'magnesium', 'maternal_health_stat', 'mating_type', 'mean_frict_vel', 'mean_peak_frict_vel', 'mechanical_damage', 'medic_hist_perform', 'menarche', 'menopause', 'methane', 'microbial_biomass', 'microbial_biomass_meth', 'mineral_nutr_regm', 'misc_param', 'model', 'molecular_data_type', 'morphology', 'n_alkanes', 'narms_isolate_number', 'nitrate', 'nitrite', 'nitro', 'non_mineral_nutr_regm', 'nose_mouth_teeth_throat_disord', 'nose_throat_disord', 'num_replicons', 'occup_samp', 'occupant_dens_samp', 'occupation', 'omics_observ_id', 'org_carb', 'org_matter', 'org_nitro', 'org_particles', 'organism_count', 'orgmod_note', 'outbreak', 'oxy_stat_samp', 'oxygen', 'package', 'package_name', 'paragraph', 'part_org_carb', 'part_org_nitro', 'particle_class', 'passage_history', 'passage_method', 'passage_number', 'pathogenicity', 'pathotype', 'pathovar', 'perturbation', 'pesticide_regm', 'pet_farm_animal', 'petroleum_hydrocarb', 'ph', 'ph_meth', 'ph_regm', 'phaeopigments', 'phenotype', 'phosphate', 'phosplipid_fatt_acid', 'photon_flux', 'plant_body_site', 'plant_product', 'ploidy', 'pollutants', 'pool_dna_extracts', 'population', 'population_description', 'porosity', 'potassium', 'pre_treatment', 'pregnancy', 'pressure', 'previous_land_use', 'previous_land_use_meth', 'primary_prod', 'primary_treatment', 'profile_position', 'project_name', 'propagation', 'pulmonary_disord', 'pulse', 'purpose_of_sampling', 'purpose_of_sequencing', 'race', 'radiation_regm', 'rainfall_regm', 'reactor_type', 'redox_potential', 'ref_biomaterial', 'reference_material', 'rel_air_humidity', 'rel_to_oxygen', 'repository', 'resp_part_matter', 'risk_group', 'salinity', 'salinity_meth', 'salt_regm', 'same_as', 'samp_collect_device', 'samp_mat_process', 'samp_salinity', 'samp_size', 'samp_sort_meth', 'samp_store_dur', 'samp_store_loc', 'samp_store_temp', 'samp_vol_we_dna_ext', 'sample_name', 'sample_type', 'sars_cov_2_diag_gene_name_1', 'sars_cov_2_diag_gene_name_2', 'sars_cov_2_diag_pcr_ct_value_1', 'sars_cov_2_diag_pcr_ct_value_2', 'season_environment', 'secondary_treatment', 'sediment_type', 'sequenced_by', 'serogroup', 'serotype', 'serovar', 'sewage_type', 'sex', 'sexual_act', 'sieving', 'silicate', 'size_frac', 'slope_aspect', 'slope_gradient', 'sludge_retent_time', 'smoker', 'sodium', 'soil_type', 'soil_type_meth', 'solar_irradiance', 'soluble_inorg_mat', 'soluble_org_mat', 'soluble_react_phosp', 'source_material_id', 'source_name', 'source_uvig', 'space_typ_state', 'special_diet', 'specimen_voucher', 'standing_water_regm', 'status', 'status_date', 'store_cond', 'strain', 'stud_book_number', 'study_complt_stat', 'study_design', 'study_disease', 'study_name', 'sub_species', 'subclone', 'subgroup', 'subject_is_affected', 'submitted_sample_id', 'submitted_subject_id', 'submitter_handle', 'subspecf_gen_lin', 'subsrc_note', 'substrain', 'substrate', 'substructure_type', 'subtype', 'sulfate', 'sulfide', 'super_population_code', 'super_population_description', 'surf_air_cont', 'surf_humidity', 'surf_material', 'surf_moisture', 'surf_moisture_ph', 'surf_temp', 'suspend_part_matter', 'suspend_solids', 'taxonomy_id', 'taxonomy_name', 'teleomorph', 'temp', 'tertiary_treatment', 'texture', 'texture_meth', 'tidal_stage', 'tillage', 'time_last_toothbrush', 'time_since_last_wash', 'tiss_cult_growth_med', 'tissue', 'tissue_lib', 'title', 'tot_carb', 'tot_depth_water_col', 'tot_diss_nitro', 'tot_inorg_nitro', 'tot_mass', 'tot_n_meth', 'tot_nitro', 'tot_org_c_meth', 'tot_org_carb', 'tot_part_carb', 'tot_phosp', 'tot_phosphate', 'travel_out_six_month', 'treatment', 'trophic_level', 'turbidity', 'twin_sibling', 'typ_occupant_dens', 'type_status', 'type_strain', 'urine_collect_meth', 'urogenit_disord', 'urogenit_tract_disor', 'vaccine_received', 'variety', 'ventilation_rate', 'ventilation_type', 'virus_enrich_appr', 'wastewater_type', 'water_content', 'water_content_soil', 'water_content_soil_meth', 'water_current', 'water_temp_regm', 'watering_regm', 'weight_loss_3_month', 'wet_mass', 'wind_direction', 'wind_speed', 'ww_population', 'ww_sample_duration', 'ww_sample_matrix', 'ww_sample_type', 'ww_surv_target_1', 'ww_surv_target_1_known_present', 'xref']