diocbgcreactionstype Module Reference

Data Types
interface	bgc_reaction_dioc_run_type

Functions/Subroutines
type(bgc_reaction_dioc_run_type) function	constructor ()
subroutine	set_kinetics_par (this, lbj, ubj, nactpft, plantNutkinetics)
subroutine	init_boundary_condition_type (this, bounds, betrtracer_vars, tracerboundarycond_vars)
subroutine	init_betrbgc (this, bounds, lbj, ubj, betrtracer_vars, namelist_buffer, bstatus)
subroutine	set_boundary_conditions (this, bounds, num_soilc, filter_soilc, dz_top, betrtracer_vars, biophysforc, biogeo_flux, tracerboundarycond_vars, betr_status)
subroutine	calc_bgc_reaction (this, bounds, col, lbj, ubj, num_soilc, filter_soilc, num_soilp, filter_soilp, jtops, dtime, betrtracer_vars, tracercoeff_vars, biophysforc, tracerstate_vars, tracerflux_vars, tracerboundarycond_vars, plant_soilbgc, biogeo_flux, betr_status)
subroutine	do_tracer_equilibration (this, bounds, lbj, ubj, jtops, num_soilc, filter_soilc, betrtracer_vars, tracercoeff_vars, tracerstate_vars, betr_status)
subroutine	initcold (this, bounds, col, betrtracer_vars, biophysforc, tracerstate_vars)
subroutine	readparams (this, name_list_buffer, betrtracer_vars)
subroutine	retrieve_biogeoflux (this, num_soilc, filter_soilc, tracerflux_vars, betrtracer_vars, biogeo_flux)
subroutine	retrieve_lnd2atm (this, bounds, num_soilc, filter_soilc, tracerflux_vars, betrtracer_vars, biogeo_flux)
subroutine	debug_info (this, bounds, num_soilc, filter_soilc, dzsoi, betrtracer_vars, tracerstate_vars, header, betr_status)
subroutine	retrieve_biostates (this, bounds, lbj, ubj, jtops, num_soilc, filter_soilc, betrtracer_vars, tracerstate_vars, biogeo_state, betr_status)

Variables
character(len= *), parameter	mod_filename = __FILE__

Function/Subroutine Documentation

calc_bgc_reaction()

subroutine diocbgcreactionstype::calc_bgc_reaction	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		type(bounds_type), intent(in)	bounds,
		type(betr_column_type), intent(in)	col,
		integer, intent(in)	lbj,
		integer, intent(in)	ubj,
		integer, intent(in)	num_soilc,
		integer, dimension(:), intent(in)	filter_soilc,
		integer, intent(in)	num_soilp,
		integer, dimension(:), intent(in)	filter_soilp,
		integer, dimension( : ), intent(in)	jtops,
		real(r8), intent(in)	dtime,
		type(betrtracer_type), intent(in)	betrtracer_vars,
		type(tracercoeff_type), intent(in)	tracercoeff_vars,
		type(betr_biogeophys_input_type), intent(in)	biophysforc,
		type(tracerstate_type), intent(inout)	tracerstate_vars,
		type(tracerflux_type), intent(inout)	tracerflux_vars,
		type(tracerboundarycond_type), intent(inout)	tracerboundarycond_vars,
		class(plant_soilbgc_type), intent(inout)	plant_soilbgc,
		type(betr_biogeo_flux_type), intent(inout)	biogeo_flux,
		type(betr_status_type), intent(out)	betr_status
	)

constructor()

type(bgc_reaction_dioc_run_type) function diocbgcreactionstype::constructor ( )

private

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debug_info()

subroutine diocbgcreactionstype::debug_info	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		type(betr_bounds_type), intent(in)	bounds,
		integer, intent(in)	num_soilc,
		integer, dimension(:), intent(in)	filter_soilc,
		real(r8), dimension(bounds%begc: ,bounds%lbj: ), intent(in)	dzsoi,
		type(betrtracer_type), intent(in)	betrtracer_vars,
		type(tracerstate_type), intent(in)	tracerstate_vars,
		character(len=*), intent(in)	header,
		type(betr_status_type), intent(out)	betr_status
	)

do_tracer_equilibration()

subroutine diocbgcreactionstype::do_tracer_equilibration	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		type(bounds_type), intent(in)	bounds,
		integer, intent(in)	lbj,
		integer, intent(in)	ubj,
		integer, dimension(bounds%begc: ), intent(in)	jtops,
		integer, intent(in)	num_soilc,
		integer, dimension(:), intent(in)	filter_soilc,
		type(betrtracer_type), intent(in)	betrtracer_vars,
		type(tracercoeff_type), intent(in)	tracercoeff_vars,
		type(tracerstate_type), intent(inout)	tracerstate_vars,
		type(betr_status_type), intent(out)	betr_status
	)

init_betrbgc()

subroutine diocbgcreactionstype::init_betrbgc	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		type(bounds_type), intent(in)	bounds,
		integer, intent(in)	lbj,
		integer, intent(in)	ubj,
		type(betrtracer_type ), intent(inout)	betrtracer_vars,
		character(len=*), intent(in)	namelist_buffer,
		type(betr_status_type), intent(out)	bstatus
	)

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init_boundary_condition_type()

subroutine diocbgcreactionstype::init_boundary_condition_type	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		type(bounds_type), intent(in)	bounds,
		type(betrtracer_type), intent(in)	betrtracer_vars,
		type(tracerboundarycond_type), intent(in)	tracerboundarycond_vars
	)

initcold()

subroutine diocbgcreactionstype::initcold	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		type(bounds_type), intent(in)	bounds,
		type(betr_column_type), intent(in)	col,
		type(betrtracer_type), intent(in)	betrtracer_vars,
		type(betr_biogeophys_input_type), intent(in)	biophysforc,
		type(tracerstate_type), intent(inout)	tracerstate_vars
	)

readparams()

subroutine diocbgcreactionstype::readparams	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		character(len=*), intent(in)	name_list_buffer,
		type(betrtracer_type), intent(inout)	betrtracer_vars
	)

retrieve_biogeoflux()

subroutine diocbgcreactionstype::retrieve_biogeoflux	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		integer, intent(in)	num_soilc,
		integer, dimension(:), intent(in)	filter_soilc,
		type(tracerflux_type), intent(in)	tracerflux_vars,
		type(betrtracer_type), intent(in)	betrtracer_vars,
		type(betr_biogeo_flux_type), intent(inout)	biogeo_flux
	)

retrieve_biostates()

subroutine diocbgcreactionstype::retrieve_biostates	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		type(betr_bounds_type), intent(in)	bounds,
		integer, intent(in)	lbj,
		integer, intent(in)	ubj,
		integer, dimension(bounds%begc: ), intent(in)	jtops,
		integer, intent(in)	num_soilc,
		integer, dimension(:), intent(in)	filter_soilc,
		type(betrtracer_type), intent(in)	betrtracer_vars,
		type(tracerstate_type), intent(inout)	tracerstate_vars,
		type(betr_biogeo_state_type), intent(inout)	biogeo_state,
		type(betr_status_type), intent(out)	betr_status
	)

retrieve_lnd2atm()

subroutine diocbgcreactionstype::retrieve_lnd2atm	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		type(betr_bounds_type), intent(in)	bounds,
		integer, intent(in)	num_soilc,
		integer, dimension(:), intent(in)	filter_soilc,
		type(tracerflux_type), intent(in)	tracerflux_vars,
		type(betrtracer_type), intent(in)	betrtracer_vars,
		type(betr_biogeo_flux_type), intent(inout)	biogeo_flux
	)

set_boundary_conditions()

subroutine diocbgcreactionstype::set_boundary_conditions	(	class(bgc_reaction_dioc_run_type), intent(inout)	this,
		type(bounds_type), intent(in)	bounds,
		integer, intent(in)	num_soilc,
		integer, dimension(:), intent(in)	filter_soilc,
		real(r8), dimension(bounds%begc: ), intent(in)	dz_top,
		type(betrtracer_type), intent(in)	betrtracer_vars,
		type(betr_biogeophys_input_type), intent(in)	biophysforc,
		type(betr_biogeo_flux_type), intent(in)	biogeo_flux,
		type(tracerboundarycond_type), intent(inout)	tracerboundarycond_vars,
		type(betr_status_type), intent(out)	betr_status
	)

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set_kinetics_par()

subroutine diocbgcreactionstype::set_kinetics_par ( class(bgc_reaction_dioc_run_type), intent(inout)  this, integer, intent(in)  lbj, integer, intent(in)  ubj, integer, intent(in)  nactpft, class(plantnutkinetics_type), intent(in)  plantNutkinetics  )

private

Variable Documentation

mod_filename

character(len=*), parameter diocbgcreactionstype::mod_filename = __FILE__

private