fatesrestartinterfacemod Module Reference

Data Types
type	fates_restart_interface_type
type	restart_map_type

Functions/Subroutines
subroutine	init (this, num_threads, fates_bounds)
subroutine	setthreadboundseach (this, thread_index, thread_bounds)
subroutine	assemble_restart_output_types (this)
subroutine	set_dim_indices (this, dk_name, idim, dim_index)
subroutine	set_cohort_index (this, index)
integer function	cohort_index (this)
subroutine	set_column_index (this, index)
integer function	column_index (this)
subroutine	init_dim_kinds_maps (this)
integer function	num_restart_vars (this)
subroutine	initialize_restart_vars (this)
subroutine	flush_rvars (this, nc)
subroutine	define_restart_vars (this, initialize_variables)
subroutine	set_restart_var (this, vname, vtype, long_name, units, flushval, hlms, initialize, ivar, index)
subroutine	set_restart_vectors (this, nc, nsites, sites)
subroutine	create_patchcohort_structure (this, nc, nsites, sites, bc_in)
subroutine	get_restart_vectors (this, nc, nsites, sites)

Variables
integer, private	ir_npatch_si
integer, private	ir_oldstock_si
integer, private	ir_cd_status_si
integer, private	ir_dd_status_si
integer, private	ir_nchill_days_si
integer, private	ir_leafondate_si
integer, private	ir_leafoffdate_si
integer, private	ir_dleafondate_si
integer, private	ir_dleafoffdate_si
integer, private	ir_acc_ni_si
integer, private	ir_gdd_si
integer, private	ir_nep_timeintegrated_si
integer, private	ir_npp_timeintegrated_si
integer, private	ir_hr_timeintegrated_si
integer, private	ir_cbal_error_fates_si
integer, private	ir_cbal_error_bgc_si
integer, private	ir_cbal_error_total_si
integer, private	ir_totecosysc_old_si
integer, private	ir_totfatesc_old_si
integer, private	ir_totbgcc_old_si
integer, private	ir_fates_to_bgc_this_ts_si
integer, private	ir_fates_to_bgc_last_ts_si
integer, private	ir_seedrainflux_si
integer, private	ir_trunk_product_si
integer, private	ir_ncohort_pa
integer, private	ir_balive_co
integer, private	ir_bdead_co
integer, private	ir_bleaf_co
integer, private	ir_broot_co
integer, private	ir_bstore_co
integer, private	ir_canopy_layer_co
integer, private	ir_canopy_layer_yesterday_co
integer, private	ir_canopy_trim_co
integer, private	ir_dbh_co
integer, private	ir_height_co
integer, private	ir_laimemory_co
integer, private	ir_leaf_md_co
integer, private	ir_root_md_co
integer, private	ir_nplant_co
integer, private	ir_gpp_acc_co
integer, private	ir_npp_acc_co
integer, private	ir_gpp_acc_hold_co
integer, private	ir_npp_acc_hold_co
integer, private	ir_npp_leaf_co
integer, private	ir_npp_froot_co
integer, private	ir_npp_sw_co
integer, private	ir_npp_dead_co
integer, private	ir_npp_seed_co
integer, private	ir_npp_store_co
integer, private	ir_bmort_co
integer, private	ir_hmort_co
integer, private	ir_cmort_co
integer, private	ir_fmort_co
integer, private	ir_frmort_co
integer, private	ir_lmort_direct_co
integer, private	ir_lmort_collateral_co
integer, private	ir_lmort_infra_co
integer, private	ir_ddbhdt_co
integer, private	ir_dbalivedt_co
integer, private	ir_dbdeaddt_co
integer, private	ir_dbstoredt_co
integer, private	ir_resp_tstep_co
integer, private	ir_pft_co
integer, private	ir_status_co
integer, private	ir_isnew_co
integer, private	ir_cwd_ag_pacw
integer, private	ir_cwd_bg_pacw
integer, private	ir_leaf_litter_paft
integer, private	ir_root_litter_paft
integer, private	ir_leaf_litter_in_paft
integer, private	ir_root_litter_in_paft
integer, private	ir_seed_bank_sift
integer, private	ir_spread_si
integer, private	ir_livegrass_pa
integer, private	ir_age_pa
integer, private	ir_area_pa
integer, private	ir_fsun_paclftls
integer, private	ir_fabd_sun_paclftls
integer, private	ir_fabi_sun_paclftls
integer, private	ir_fabd_sha_paclftls
integer, private	ir_fabi_sha_paclftls
integer, private	ir_watermem_siwm
integer, parameter	fates_restart_num_dimensions = 2
integer, parameter	fates_restart_num_dim_kinds = 4
integer, parameter	old_cohort = 0
integer, parameter	new_cohort = 1
logical, parameter	debug =.false.
character(len= *), parameter, private	sourcefile = __FILE__

Function/Subroutine Documentation

assemble_restart_output_types()

subroutine fatesrestartinterfacemod::assemble_restart_output_types

(

class(fates_restart_interface_type), intent(inout)

this

)

cohort_index()

integer function fatesrestartinterfacemod::cohort_index

(

class(fates_restart_interface_type), intent(in)

this

)

column_index()

integer function fatesrestartinterfacemod::column_index

(

class(fates_restart_interface_type), intent(in)

this

)

create_patchcohort_structure()

subroutine fatesrestartinterfacemod::create_patchcohort_structure	(	class(fates_restart_interface_type), intent(inout)	this,
		integer, intent(in)	nc,
		integer, intent(in)	nsites,
		type(ed_site_type), dimension(nsites), intent(inout), target	sites,
		type(bc_in_type), dimension(nsites), intent(in)	bc_in
	)

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define_restart_vars()

subroutine fatesrestartinterfacemod::define_restart_vars	(	class(fates_restart_interface_type), intent(inout)	this,
		logical, intent(in)	initialize_variables
	)

flush_rvars()

subroutine fatesrestartinterfacemod::flush_rvars	(	class(fates_restart_interface_type)	this,
		integer, intent(in)	nc
	)

get_restart_vectors()

subroutine fatesrestartinterfacemod::get_restart_vectors	(	class(fates_restart_interface_type), intent(inout)	this,
		integer, intent(in)	nc,
		integer, intent(in)	nsites,
		type(ed_site_type), dimension(nsites), intent(inout), target	sites
	)

init()

subroutine fatesrestartinterfacemod::init	(	class(fates_restart_interface_type), intent(inout)	this,
		integer, intent(in)	num_threads,
		type(fates_bounds_type), intent(in)	fates_bounds
	)

init_dim_kinds_maps()

subroutine fatesrestartinterfacemod::init_dim_kinds_maps

(

class(fates_restart_interface_type), intent(inout)

this

)

initialize_restart_vars()

subroutine fatesrestartinterfacemod::initialize_restart_vars

(

class(fates_restart_interface_type), intent(inout)

this

)

num_restart_vars()

integer function fatesrestartinterfacemod::num_restart_vars

(

class(fates_restart_interface_type), intent(in)

this

)

set_cohort_index()

subroutine fatesrestartinterfacemod::set_cohort_index	(	class(fates_restart_interface_type), intent(inout)	this,
		integer, intent(in)	index
	)

set_column_index()

subroutine fatesrestartinterfacemod::set_column_index	(	class(fates_restart_interface_type), intent(inout)	this,
		integer, intent(in)	index
	)

set_dim_indices()

subroutine fatesrestartinterfacemod::set_dim_indices	(	class(fates_restart_interface_type), intent(inout)	this,
		character(len=*), intent(in)	dk_name,
		integer, intent(in)	idim,
		integer, intent(in)	dim_index
	)

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set_restart_var()

subroutine fatesrestartinterfacemod::set_restart_var	(	class(fates_restart_interface_type)	this,
		character(len=*), intent(in)	vname,
		character(len=*), intent(in)	vtype,
		character(len=*), intent(in)	long_name,
		character(len=*), intent(in)	units,
		real(r8), intent(in)	flushval,
		character(len=*), intent(in)	hlms,
		logical, intent(in)	initialize,
		integer, intent(inout)	ivar,
		integer, intent(inout)	index
	)

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set_restart_vectors()

subroutine fatesrestartinterfacemod::set_restart_vectors	(	class(fates_restart_interface_type)	this,
		integer, intent(in)	nc,
		integer, intent(in)	nsites,
		type(ed_site_type), dimension(nsites), intent(inout), target	sites
	)

setthreadboundseach()

subroutine fatesrestartinterfacemod::setthreadboundseach	(	class(fates_restart_interface_type), intent(inout)	this,
		integer, intent(in)	thread_index,
		type(fates_bounds_type), intent(in)	thread_bounds
	)

Variable Documentation

debug

logical, parameter fatesrestartinterfacemod::debug =.false.

fates_restart_num_dim_kinds

integer, parameter fatesrestartinterfacemod::fates_restart_num_dim_kinds = 4

fates_restart_num_dimensions

integer, parameter fatesrestartinterfacemod::fates_restart_num_dimensions = 2

ir_acc_ni_si

integer, private fatesrestartinterfacemod::ir_acc_ni_si

private

ir_age_pa

integer, private fatesrestartinterfacemod::ir_age_pa

private

ir_area_pa

integer, private fatesrestartinterfacemod::ir_area_pa

private

ir_balive_co

integer, private fatesrestartinterfacemod::ir_balive_co

private

ir_bdead_co

integer, private fatesrestartinterfacemod::ir_bdead_co

private

ir_bleaf_co

integer, private fatesrestartinterfacemod::ir_bleaf_co

private

ir_bmort_co

integer, private fatesrestartinterfacemod::ir_bmort_co

private

ir_broot_co

integer, private fatesrestartinterfacemod::ir_broot_co

private

ir_bstore_co

integer, private fatesrestartinterfacemod::ir_bstore_co

private

ir_canopy_layer_co

integer, private fatesrestartinterfacemod::ir_canopy_layer_co

private

ir_canopy_layer_yesterday_co

integer, private fatesrestartinterfacemod::ir_canopy_layer_yesterday_co

private

ir_canopy_trim_co

integer, private fatesrestartinterfacemod::ir_canopy_trim_co

private

ir_cbal_error_bgc_si

integer, private fatesrestartinterfacemod::ir_cbal_error_bgc_si

private

ir_cbal_error_fates_si

integer, private fatesrestartinterfacemod::ir_cbal_error_fates_si

private

ir_cbal_error_total_si

integer, private fatesrestartinterfacemod::ir_cbal_error_total_si

private

ir_cd_status_si

integer, private fatesrestartinterfacemod::ir_cd_status_si

private

ir_cmort_co

integer, private fatesrestartinterfacemod::ir_cmort_co

private

ir_cwd_ag_pacw

integer, private fatesrestartinterfacemod::ir_cwd_ag_pacw

private

ir_cwd_bg_pacw

integer, private fatesrestartinterfacemod::ir_cwd_bg_pacw

private

ir_dbalivedt_co

integer, private fatesrestartinterfacemod::ir_dbalivedt_co

private

ir_dbdeaddt_co

integer, private fatesrestartinterfacemod::ir_dbdeaddt_co

private

ir_dbh_co

integer, private fatesrestartinterfacemod::ir_dbh_co

private

ir_dbstoredt_co

integer, private fatesrestartinterfacemod::ir_dbstoredt_co

private

ir_dd_status_si

integer, private fatesrestartinterfacemod::ir_dd_status_si

private

ir_ddbhdt_co

integer, private fatesrestartinterfacemod::ir_ddbhdt_co

private

ir_dleafoffdate_si

integer, private fatesrestartinterfacemod::ir_dleafoffdate_si

private

ir_dleafondate_si

integer, private fatesrestartinterfacemod::ir_dleafondate_si

private

ir_fabd_sha_paclftls

integer, private fatesrestartinterfacemod::ir_fabd_sha_paclftls

private

ir_fabd_sun_paclftls

integer, private fatesrestartinterfacemod::ir_fabd_sun_paclftls

private

ir_fabi_sha_paclftls

integer, private fatesrestartinterfacemod::ir_fabi_sha_paclftls

private

ir_fabi_sun_paclftls

integer, private fatesrestartinterfacemod::ir_fabi_sun_paclftls

private

ir_fates_to_bgc_last_ts_si

integer, private fatesrestartinterfacemod::ir_fates_to_bgc_last_ts_si

private

ir_fates_to_bgc_this_ts_si

integer, private fatesrestartinterfacemod::ir_fates_to_bgc_this_ts_si

private

ir_fmort_co

integer, private fatesrestartinterfacemod::ir_fmort_co

private

ir_frmort_co

integer, private fatesrestartinterfacemod::ir_frmort_co

private

ir_fsun_paclftls

integer, private fatesrestartinterfacemod::ir_fsun_paclftls

private

ir_gdd_si

integer, private fatesrestartinterfacemod::ir_gdd_si

private

ir_gpp_acc_co

integer, private fatesrestartinterfacemod::ir_gpp_acc_co

private

ir_gpp_acc_hold_co

integer, private fatesrestartinterfacemod::ir_gpp_acc_hold_co

private

ir_height_co

integer, private fatesrestartinterfacemod::ir_height_co

private

ir_hmort_co

integer, private fatesrestartinterfacemod::ir_hmort_co

private

ir_hr_timeintegrated_si

integer, private fatesrestartinterfacemod::ir_hr_timeintegrated_si

private

ir_isnew_co

integer, private fatesrestartinterfacemod::ir_isnew_co

private

ir_laimemory_co

integer, private fatesrestartinterfacemod::ir_laimemory_co

private

ir_leaf_litter_in_paft

integer, private fatesrestartinterfacemod::ir_leaf_litter_in_paft

private

ir_leaf_litter_paft

integer, private fatesrestartinterfacemod::ir_leaf_litter_paft

private

ir_leaf_md_co

integer, private fatesrestartinterfacemod::ir_leaf_md_co

private

ir_leafoffdate_si

integer, private fatesrestartinterfacemod::ir_leafoffdate_si

private

ir_leafondate_si

integer, private fatesrestartinterfacemod::ir_leafondate_si

private

ir_livegrass_pa

integer, private fatesrestartinterfacemod::ir_livegrass_pa

private

ir_lmort_collateral_co

integer, private fatesrestartinterfacemod::ir_lmort_collateral_co

private

ir_lmort_direct_co

integer, private fatesrestartinterfacemod::ir_lmort_direct_co

private

ir_lmort_infra_co

integer, private fatesrestartinterfacemod::ir_lmort_infra_co

private

ir_nchill_days_si

integer, private fatesrestartinterfacemod::ir_nchill_days_si

private

ir_ncohort_pa

integer, private fatesrestartinterfacemod::ir_ncohort_pa

private

ir_nep_timeintegrated_si

integer, private fatesrestartinterfacemod::ir_nep_timeintegrated_si

private

ir_npatch_si

integer, private fatesrestartinterfacemod::ir_npatch_si

private

ir_nplant_co

integer, private fatesrestartinterfacemod::ir_nplant_co

private

ir_npp_acc_co

integer, private fatesrestartinterfacemod::ir_npp_acc_co

private

ir_npp_acc_hold_co

integer, private fatesrestartinterfacemod::ir_npp_acc_hold_co

private

ir_npp_dead_co

integer, private fatesrestartinterfacemod::ir_npp_dead_co

private

ir_npp_froot_co

integer, private fatesrestartinterfacemod::ir_npp_froot_co

private

ir_npp_leaf_co

integer, private fatesrestartinterfacemod::ir_npp_leaf_co

private

ir_npp_seed_co

integer, private fatesrestartinterfacemod::ir_npp_seed_co

private

ir_npp_store_co

integer, private fatesrestartinterfacemod::ir_npp_store_co

private

ir_npp_sw_co

integer, private fatesrestartinterfacemod::ir_npp_sw_co

private

ir_npp_timeintegrated_si

integer, private fatesrestartinterfacemod::ir_npp_timeintegrated_si

private

ir_oldstock_si

integer, private fatesrestartinterfacemod::ir_oldstock_si

private

ir_pft_co

integer, private fatesrestartinterfacemod::ir_pft_co

private

ir_resp_tstep_co

integer, private fatesrestartinterfacemod::ir_resp_tstep_co

private

ir_root_litter_in_paft

integer, private fatesrestartinterfacemod::ir_root_litter_in_paft

private

ir_root_litter_paft

integer, private fatesrestartinterfacemod::ir_root_litter_paft

private

ir_root_md_co

integer, private fatesrestartinterfacemod::ir_root_md_co

private

ir_seed_bank_sift

integer, private fatesrestartinterfacemod::ir_seed_bank_sift

private

ir_seedrainflux_si

integer, private fatesrestartinterfacemod::ir_seedrainflux_si

private

ir_spread_si

integer, private fatesrestartinterfacemod::ir_spread_si

private

ir_status_co

integer, private fatesrestartinterfacemod::ir_status_co

private

ir_totbgcc_old_si

integer, private fatesrestartinterfacemod::ir_totbgcc_old_si

private

ir_totecosysc_old_si

integer, private fatesrestartinterfacemod::ir_totecosysc_old_si

private

ir_totfatesc_old_si

integer, private fatesrestartinterfacemod::ir_totfatesc_old_si

private

ir_trunk_product_si

integer, private fatesrestartinterfacemod::ir_trunk_product_si

private

ir_watermem_siwm

integer, private fatesrestartinterfacemod::ir_watermem_siwm

private

new_cohort

integer, parameter fatesrestartinterfacemod::new_cohort = 1

old_cohort

integer, parameter fatesrestartinterfacemod::old_cohort = 0

sourcefile

character(len=*), parameter, private fatesrestartinterfacemod::sourcefile = __FILE__

private